Summary
mir-154 microRNA precursor clan
mir-154 clan contains the families mir-154, mir-1197, mir-368, mir-329, mir-379, mir-485, mir-889, mir-3578
This clan contains 8 families and the total number of sequence regions in the clan is 4,834.
Literature references
- Kozomara A, Birgaoanu M, Griffiths-Jones S, Nucleic Acids Res. 2019;47:D155.: miRBase: from microRNA sequences to function. 30423142
Members
This clan contains the following 8 member families:
mir-154 mir-1197 mir-368 mir-379 mir-889 mir-3578 mir-329 mir-485Secondary structures
This tool allows you to view the secondary structure images of two clan members side-by-side. Choose the family structures using the two drop-down menus below.
Alignments
The table below shows the number of occurrences of each family throughout the sequence database. In brackets beside each number is the percentage of the total number of sequence hits for the clan that are represented by this family. The rightmost column provides a link to the alignments tab for each family.
| Rfam family | Num. regions | Alignment |
|---|---|---|
| mir-485 (RF04296) | 124 (2.6%) | View |
| mir-329 (RF04295) | 455 (9.4%) | View |
| mir-3578 (RF04294) | 293 (6.1%) | View |
| mir-889 (RF04293) | 96 (2.0%) | View |
| mir-379 (RF04292) | 675 (14.0%) | View |
| mir-368 (RF04291) | 604 (12.5%) | View |
| mir-1197 (RF04290) | 128 (2.6%) | View |
| mir-154 (RF00641) | 2,459 (50.9%) | View |
