Seed sequence alignment for RF01725

URS0000AB983A_12908/1-93 unclassified sequences 0.0 URS0000AB8821_12908/1-93 unclassified sequences 0.0 URS0000AB9530_12908/1-93 unclassified sequences 0.0 URS0000ABC145_12908/1-93 unclassified sequences 0.0 URS0000AB9A7F_12908/1-93 unclassified sequences 0.0 URS0000ABAD55_12908/1-93 unclassified sequences 0.0 URS0000AB8056_12908/1-93 unclassified sequences 0.0 URS0000ABA09F_12908/1-93 unclassified sequences 0.0 URS0000AB4FD2_12908/1-93 unclassified sequences 0.0 URS0000AB2C25_12908/1-93 unclassified sequences 0.0 URS0000AB62F0_12908/1-93 unclassified sequences 0.0 URS0000AB67E8_12908/1-90 unclassified sequences 0.0 URS0000AB1C82_12908/1-93 unclassified sequences 0.0 URS0000AB488A_12908/1-93 unclassified sequences 0.0 URS0000ABC8FD_12908/1-93 unclassified sequences 0.0 URS0000AB9575_12908/1-93 unclassified sequences 0.0 URS0000ABBA91_12908/1-93 unclassified sequences 0.0 URS0000AB24B3_12908/1-93 unclassified sequences 0.0 URS0000AB1AD0_12908/1-93 unclassified sequences 0.0 URS0000AB19B2_12908/1-93 unclassified sequences 0.0 URS0000AB3446_12908/1-93 unclassified sequences 0.0 URS0000AB9D09_12908/1-93 unclassified sequences 0.0 URS0000AB1F63_12908/1-93 unclassified sequences 0.0 URS0000AB5FEC_12908/1-93 unclassified sequences 0.0 URS0000AB55DA_12908/1-93 unclassified sequences 0.0 URS0000AB426E_12908/1-93 unclassified sequences 0.0 URS0000AB8250_12908/1-93 unclassified sequences 0.0 URS0000AB31B7_12908/1-93 unclassified sequences 0.0 URS0000AB4300_12908/1-93 unclassified sequences 0.0 URS0000AB94D4_12908/1-93 unclassified sequences 0.0
AUUAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......AGGCUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAUUAGUCAAAa AUUAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCCU.......................-.GAA.......................-GAUGUGGCA-.............GAGA......................................................................................-UGCAA...-CUAAAUAGUCAAAa UCUAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGGCUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAUa AUAAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa GUAAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa UAGAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAGA......................................................................................-UGCAA...-CUAAGUAGUCAAAa UUAAAACAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa UAAAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGGCUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa UUAAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGGCUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa UAAAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAGA......................................................................................-UGCAA...-CUAAAUAGUCAAAa UAAAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa UUGAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGGCUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCA--. UUGAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGGCUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAGUAGUCAAAa AAUGAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGGCUA......................UCCA..AGGUGCUA.......................-.GAA.......................-CAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa AUUAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa AUUAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGGCUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAu AAGAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa AAUAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa AAUAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGGCUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa ACUAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGGCUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa AUUAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGGCUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa UAAGAACAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............AAAA......................................................................................-UGCAA...-CUAAGUAGUCAAAu UAGGAACAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAGUAGUCAAAu UAAGAACAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAGUAGUCAAAu GAGAAGCAUAUAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GCAA......................................................................................-UGCAA...-CUAAGUAGUCAAAg GAGAAGCAUUUAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GCAA......................................................................................-UGCAA...-CUAAGUAGUCAAAg UAGAAGCAUAUAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GCAA......................................................................................-UGCAA...-CUAAGUAGUCAAAc AAGGAACAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAGUAGUCAAAc GAGAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-AAUGUGGCA-.............GCAA......................................................................................-UGCAA...-CUAAGUAGUCAAAc GAGGAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-AAUGUGGCA-.............GCAA......................................................................................-UGCAA...-CUAAGUAGUCAAAc

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