Rfam: Seed sequence alignment for RF01725

URS0000ABD550_12908/1-93 unclassified sequences 0.0 URS0000ABBB71_12908/1-93 unclassified sequences 0.0 URS0000AB14E3_12908/1-93 unclassified sequences 0.0 URS0000AB984F_12908/1-93 unclassified sequences 0.0 URS0000AB90E6_12908/1-93 unclassified sequences 0.0 URS0000ABCD61_12908/1-93 unclassified sequences 0.0 URS0000ABBE5D_12908/1-93 unclassified sequences 0.0 URS0000AB1990_12908/1-93 unclassified sequences 0.0 URS0000ABA48C_12908/1-93 unclassified sequences 0.0 URS0000AB2288_12908/1-93 unclassified sequences 0.0 URS0000D687A7_12908/1-90 unclassified sequences 0.0 URS0000D665A9_12908/1-89 unclassified sequences 0.0 URS0000D69BC5_12908/1-89 unclassified sequences 0.0 URS0000D6AA3F_12908/1-89 unclassified sequences 0.0 URS0000D6C701_12908/1-89 unclassified sequences 0.0 URS0000D6A6E4_12908/1-89 unclassified sequences 0.0 URS0000D6CCEF_12908/1-89 unclassified sequences 0.0 URS0000D69852_12908/1-88 unclassified sequences 0.0 URS0000D68A14_12908/1-88 unclassified sequences 0.0 URS0000D660BC_12908/1-89 unclassified sequences 0.0 URS0000D6782A_12908/1-89 unclassified sequences 0.0 URS0000D6B2A6_12908/1-89 unclassified sequences 0.0 URS0000D699CA_12908/1-89 unclassified sequences 0.0 URS0000D6A851_12908/1-88 unclassified sequences 0.0 URS0000D68971_12908/1-87 unclassified sequences 0.0 URS0000D6B651_12908/1-87 unclassified sequences 0.0 URS0000D6C19A_12908/1-87 unclassified sequences 0.0 URS0000D69B2A_12908/1-87 unclassified sequences 0.0 URS0000D68A3B_12908/1-87 unclassified sequences 0.0 URS0000D69C3E_12908/1-87 unclassified sequences 0.0

AAGAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACCgU..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAGUAGUCAAA. AAGAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGGCUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GGAA......................................................................................-UGCAA...-CUAAGUAGUCAAAc AAGAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGGCUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAGUAGUCAAAc UAGAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAGUAGUCAAAc AAGAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GCAA......................................................................................-UGCAA...-CUAAGUAGUCAAAc AAGAAGCAUAUAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAGUAGUCAAAc AAGAGGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAGUAGUCAAAc AAGAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAGUAGUCAAAc AUGAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAGUAGUCAAAa AAUAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAc UAAAAGCAUUAAGAGA.GG.GUA.........--AU.....................................UACC.U.CAGCA.ACC.U..GGA......AGGCU-......................ACCA..AGGUGCUA.......................-aGAA.......................-GAUGUGGCUU.............-U--......................................................................................AAGCAA...AAAAGAGCCA--AU. AAAAAGCAUGGAGAG-.-A.GGU.........CAAA.....................................ACCU.-.CAGCA.ACC.U..AGA......AAGCUA......................ACUA..AGGUGCUU.......................-.AAA.......................-UAUGUGGUU-.............UAU-......................................................................................-AACAA...AAAAUAGCUUUC--. AAAAUGCAUGGAGAG-.-A.GGA.........CAAA.....................................UCCU.-.CAGCA.ACC.U..AGA......GAGCUA......................ACUA..AGGUGCUU.......................-.AAA.......................-UAUGUGGUU-.............UAU-......................................................................................-AACAA...AAAAUAGCUUUC--. AAAAAGCAUGGAGAG-.-A.GGU.........AGAA.....................................GCCU.-.CAGCA.ACC.U..AGA......AAGCUA......................ACUA..AGGUGCUU.......................-.AAG.......................-UAUGUGGUU-.............UAU-......................................................................................-AACAA...AAAAUAGCUUUU--. AAAAAGCAUGGAGAGA.GG.G-U.........-AAA.....................................-ACC.U.CAGCA.ACC.U..AGA......UAGCUA......................ACUA..AGGUGCUU.......................-.AAA.......................-UAUGUGGUU-.............UAU-......................................................................................-AACAA...AAAAUAGCUUUU--. AAAAAGCAUGGAGAG-.-A.GGU.........AAAA.....................................UCCU.-.CAGCA.ACC.U..AGA......AAGCUA......................ACUA..AGGUGCUU.......................-.AAA.......................-UAUGUGGUU-.............UAU-......................................................................................-AACAA...AAAAUAGCUUUU--. AAAAAGCAUGGAGAGA.GG.G-U.........-AAA.....................................-ACC.U.CAGCA.ACC.U..AGA......AAGCUA......................ACUA..AGGUGCUU.......................-.AAA.......................-UAUGUGGUU-.............UAU-......................................................................................-AACAA...AAAAUAGCUCUC--. AAAAAGCAUGGAGAG-.AG.G-U.........-AAA.....................................G-CC.U.CAGCA.ACC.U..AGA......AAGCUA......................ACUA..AGGUGCUU.......................-.UAA.......................-UAUGUGGUU-.............UAU-......................................................................................-AACAA...AAAAUAGCUUUU--. AAAAAGCAUGGAGAG-.AG.G-U.........-AAA.....................................G-CC.U.CAGCA.ACC.U..AGA......AAGCUA......................ACUA..AGGUGCUU.......................-.UAA.......................-UAUGUGGUUU.............--A-......................................................................................AAACAA...AAAAUAGCUUUU--. AAAAAGCAUGGAGAG-.AG.GUU.........---A.....................................AGCC.U.CAGCA.ACC.U..AGA......AAGCUA......................ACUA..AGGUGCUU.......................-uAAG.......................-UAUGUGGUUU.............G---......................................................................................AAACAA...AAAAUAGCUUUU--. AAAAAGCAUGGAGAG-.AG.GUU.........--AA.....................................AACC.U.CAGCA.ACC.U..AGA......AAGCUA......................ACUA..AGGUGCUU.......................-.AGA.......................-UAUGUGGUUU.............-GU-......................................................................................-AACAA...AAAACAGCUUUC--. AAAAAGCAUGGAGAG-.AG.GUU.........--AA.....................................AACC.U.CAGCA.ACC.U..AGA......AAGCUA......................ACUA..AGGUGCUU.......................-.AAA.......................-UAUGUGGUUU.............-GU-......................................................................................-AACAA...AAAACAGCUUUC--. AAAAAGCAUGGAGAG-.AG.GUU.........--AA.....................................AACC.U.CAGCA.ACC.U..AGA......AAGCUA......................ACUA..AGGUGCUU.......................-.GAA.......................-UAUGUGGUU-.............UGU-......................................................................................-AACAA...AAAAUAGCUUUC--. GGUUUGCAUAAAGAG-.AG.G--.........GAA-.....................................-UCC.U.CAGCA.ACC.U..AGA......UUACCA......................AUUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............UAAC......................................................................................-GACAA...AAAAUGGUAUUU--. UAAAUGCAUAGAGAG-.AG.GA-.........--AA.....................................-UCC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUG-.............AUAC......................................................................................-AACAA...AAAAUGGCGUUC--. AAGUUGCAUAGAGAG-.AG.GAA.........----.....................................UUCC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AACAA...AA-AUUGGCGUUC-. UAAAUGCAUAGAGAG-.AG.GA-.........-UU-.....................................-UCC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AACAA...AAAAU-GGCUUUC-. UAAAUGCAUAGAGAG-.AG.GAA.........----.....................................UUCC.U.CAGCA.ACC.U..AGU......CGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AACAA...AAAAUGGCGUUC--. UAAAUGCAUAGAGAG-.AG.GAA.........----.....................................UUCC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACCA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AACAA...AAAAUGGCGUUC--. UGAAUGCAUAGAGAG-.AG.GAA.........----.....................................UUCC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AACAA...AAAAUGGCGUUC--.