Rfam: Seed sequence alignment for RF01725

URS0000D66E7D_12908/1-87 unclassified sequences 0.0 URS0000D6678A_12908/1-87 unclassified sequences 0.0 URS0000D6C51C_12908/1-87 unclassified sequences 0.0 URS0000D6C6D5_12908/1-87 unclassified sequences 0.0 URS0000D677C3_12908/1-87 unclassified sequences 0.0 URS0000D69439_12908/1-87 unclassified sequences 0.0 URS0000D6D1D1_12908/1-87 unclassified sequences 0.0 URS0000D66AAC_12908/1-87 unclassified sequences 0.0 URS0000D65E4E_12908/1-88 unclassified sequences 0.0 URS0000D67503_12908/1-87 unclassified sequences 0.0 URS0000D6A031_12908/1-90 unclassified sequences 0.0 URS0000D6A72D_12908/1-90 unclassified sequences 0.0 URS0000D674CF_12908/1-90 unclassified sequences 0.0 URS0000D67F6B_12908/1-89 unclassified sequences 0.0 URS0000D6AF11_12908/1-89 unclassified sequences 0.0 URS0000D6BD1C_12908/1-88 unclassified sequences 0.0 URS0000D6B233_12908/1-88 unclassified sequences 0.0 URS0000D6C2C0_12908/1-88 unclassified sequences 0.0 URS0000D69652_12908/1-88 unclassified sequences 0.0 URS0000D65731_12908/1-89 unclassified sequences 0.0 URS0000D65CB4_12908/1-89 unclassified sequences 0.0 URS0000D698F8_12908/1-89 unclassified sequences 0.0 URS0000D69113_12908/1-89 unclassified sequences 0.0 URS0000D6AAE1_12908/1-89 unclassified sequences 0.0 URS0000D6701A_12908/1-88 unclassified sequences 0.0 URS0000D65B7E_12908/1-88 unclassified sequences 0.0 URS0000D6C051_12908/1-88 unclassified sequences 0.0 URS0000D6A65A_12908/1-88 unclassified sequences 0.0 URS0000AB7388_12908/1-92 unclassified sequences 0.0 URS0000D6B115_12908/1-90 unclassified sequences 0.0

UAAAUGCAUAGAGAG-.AG.G--.........AAUA.....................................--CC.U.CAGCA.ACC.U..AGU......AGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AAAC......................................................................................-AACAA...A-AAUUGGCGUUC-. UUAAUGCAUAGAGAG-.AG.GAA.........----.....................................UUCC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AACAA...AAAAUGGCGUUC--. UAAAUGCAUAGAGAG-.AG.GAA.........----.....................................UUCC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AACAA...AAAAUGGCGUUC--. UUAUUGCAUAGAGAG-.AG.G--.........GAUA.....................................--CC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AACAA...AAAAUGGCGUUC--. UUAUUGCAUAGAGAG-.AG.G--.........GAUA.....................................--CC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............UUAC......................................................................................-AACAA...AAAAUGGCGUUC--. UAAAUGCAUAGAGAG-.AG.G--.........GAUA.....................................--CC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AACAA...AAAAUGGCGUUC--. UAAUUGCAUAGAGAG-.AG.G--.........AAUA.....................................--CC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AACAA...AA-AUUGGCGUUC-. UGAGUGCAUAUAGAG-.AG.G--.........AAUA.....................................--CC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AACAA...AAAAUGGCGUUC--. UGAGUGCAUAUAGAG-.AG.G--.........AAUA.....................................--CC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AACAA...AAAAAUGGCGUUC-. UGAGUGCAUAUAGAG-.AG.G--.........AAUA.....................................--CC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AGCAA...AAAAUGGCGUUC--. GCUUUGCAUAAAGAG-.AG.G--.........GAAG.....................................--CC.U.CAGCA.ACC.U..AGA......AUGCCA......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUUA.............UUA-......................................................................................CAACAA...AAAAUGGCUUUUU-. GUUUUGCAUAAAGAG-.AG.G--.........GAAG.....................................--CC.U.CAGCA.ACC.U..AGA......UUGCCA......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUUA.............UUA-......................................................................................CAACAA...AAAAUGGCUUUUU-. AUUUUGCAUAAAGAG-.AG.G--.........GAAG.....................................--CC.U.CAGCA.ACC.U..AGA......UUGCCA......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUUA.............UUA-......................................................................................CAACAA...A-AAAUGGCUUUUG. UAUUUGCAUAUAGAG-.AG.G--.........GAAA.....................................--CC.U.CAGCA.ACC.U..AGA......AUGCCA......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............UUAC......................................................................................-AACAA...AAAAUGGCUUUUU-. UAUUUGCAUAAAGAG-.AG.G--.........GAAA.....................................--CC.U.CAGCA.ACC.U..AGA......AUGCCA......................ACCA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............UUAC......................................................................................-AACAA...AAAAUGGUAAUUA-. UAAUUGCAUAAAGAG-.AG.G--.........AAAG.....................................--CC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............UAAC......................................................................................-AGCAA...AAAAUGGCAUCAC-. UAGUUGCAUAAAGAG-.AG.G--.........GAAA.....................................--CC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............UAAC......................................................................................-AGCAA...AAAAUGGCAUCCC-. UAAUUGCAUAAAGAG-.AG.G--.........GAAA.....................................--CC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AAAU......................................................................................-AACAA...AAAAUGGCUUCUU-. UAGUUGCAUAAAGAG-.AA.G--.........GAAA.....................................--CU.U.CAGCA.ACC.U..AGU......AGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AAAU......................................................................................-AACAA...AAAAUGGCUUCUU-. AGUUUGCAUAAAGAG-.AG.GA-.........--AA.....................................-UCC.U.CAGCA.ACC.U..AGA......UUACCA......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............UAAC......................................................................................-GACAA...AAAAUGGUAUUUU-. GGUUUGCAUAAAGAG-.AG.G--.........GAA-.....................................-UCC.U.CAGCA.ACC.U..AGA......UUACCA......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............UAAC......................................................................................-GACAA...AAAAUGGUAUUUU-. GGUUUGCAUAUAGAG-.AG.GA-.........--AA.....................................-UCC.U.CAGCA.ACC.U..AGA......AUACCA......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............UUAC......................................................................................-AACAA...AAAAUGGUAUUUC-. GGUUUGCAUAAAGAG-.AG.GA-.........--AA.....................................-UCC.U.CAGCA.ACC.U..AGA......AUACCA......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............UUAC......................................................................................-AACAA...AAAAUGGUAUUUC-. GGUUUGCAUAAAGAG-.AG.GA-.........--AA.....................................-UCC.U.CAGCA.ACC.U..AGA......AUACCA......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............UUAC......................................................................................-AACAA...AAGAUGGUAUUUC-. GUUUUGCAUAAAGAG-.AG.GA-.........--AA.....................................-UCC.U.CAGCA.ACC.U..AGA......UACCA-......................ACUA..AGGUGCUA.......................-.UUU.......................-GAUGUGGUU-.............UUAC......................................................................................-AACAA...AAAAUGGUAUUUC-. UAAAUGCAUAGAGAG-.AG.GAA.........----.....................................UUCC.U.CAGCA.ACC.U..AGA......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AACAA...AAAAUGGCGUUCC-. UAAAUGCAUAGAGAG-.AG.G--.........GAUA.....................................--CC.U.CAGCA.ACC.U..AGA......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AACAA...AAAAUGGCGUUCC-. UAAAUGCAUAAAGAG-.AG.G--.........GAUA.....................................--CC.U.CAGCA.ACC.U..AGU......UGCCA-......................ACUA..AGGUGCUU.......................-.UUU.......................-GAUGUGGUU-.............AUAC......................................................................................-AACAA...AAAAUGGCGUUCC-. ACAGUGCAUGAAGAG-.AG.G--.........GAAA.....................................--CC.U.CAGCA.ACC.U..AGA......AAGCAA......................ACAA..AGGUGCUU.......................-.-CA.......................-AAUGCGGUUU.............UUUA.....................................................................................uAGACAA...AAAAAUAUGCUAUU. AUCUUGCAUGAAGAG-.AG.G--.........GUAA.....................................--CC.U.CAGCA.ACC.U..AGA......AAGCAA......................ACAA..AGGUGCU-.......................-.AGA.......................-GAUGCGGUUU.............UUUA......................................................................................AAACAA...AAAAUAUGCUACC-.