Seed sequence alignment for RF01725

URS0000AB26F4_12908/1-93 unclassified sequences 0.0 URS0000AB58C1_12908/1-93 unclassified sequences 0.0 URS0000ABADB5_12908/1-93 unclassified sequences 0.0 URS0000AB4830_12908/1-93 unclassified sequences 0.0 URS0000ABC92D_12908/1-93 unclassified sequences 0.0 URS0000ABAF0E_12908/1-93 unclassified sequences 0.0 URS0000AB8BA3_12908/1-93 unclassified sequences 0.0 URS0000ABB94F_12908/1-93 unclassified sequences 0.0 URS0000ABC6A1_12908/1-93 unclassified sequences 0.0 URS0000ABA806_12908/1-93 unclassified sequences 0.0 URS0000AB988B_12908/1-93 unclassified sequences 0.0 URS0000AB58F9_12908/1-93 unclassified sequences 0.0 URS0000AB3BBD_12908/1-93 unclassified sequences 0.0 URS0000AB44F2_12908/1-93 unclassified sequences 0.0 URS0000AB516D_12908/1-93 unclassified sequences 0.0 URS0000ABBF39_12908/1-93 unclassified sequences 0.0 URS0000ABB5A8_12908/1-93 unclassified sequences 0.0 URS0000AB5706_12908/1-93 unclassified sequences 0.0 URS0000ABCB7F_12908/1-93 unclassified sequences 0.0 URS0000AB1A0E_12908/1-93 unclassified sequences 0.0 URS0000ABB649_12908/1-93 unclassified sequences 0.0 URS0000AB9FAA_12908/1-93 unclassified sequences 0.0 URS0000AB9EA1_12908/1-93 unclassified sequences 0.0 URS0000AB2691_12908/1-93 unclassified sequences 0.0 URS0000AB37AF_12908/1-93 unclassified sequences 0.0 URS0000AB2EB2_12908/1-93 unclassified sequences 0.0 URS0000AB9E72_12908/1-93 unclassified sequences 0.0 URS0000ABD3D8_12908/1-93 unclassified sequences 0.0 URS0000AB3CAD_12908/1-93 unclassified sequences 0.0 URS0000AB373A_12908/1-93 unclassified sequences 0.0
UUAUGACAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCUU.......................-.GUA.......................-GAUGUGGCA-.............GUAA......................................................................................-UGCAA...CCAAGUAGUCGUAC. UAAUAACAUAAAGAGA.AG.GUU.........--AA.....................................GGCC.U.CGGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCUU.......................-.GUA.......................-GAUGUGGCA-.............GUAA......................................................................................-UGCAA...CCAAGUAGUCGUAU. UAGGAACAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCUU.......................-.GUA.......................-GAUGUGGCA-.............GUAA......................................................................................-UGCAA...-CUAAGUAGUCGUAu UAGGAACAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCUU.......................-.GUA.......................-GAUGUGGCA-.............GUAA......................................................................................-UGCAA...-CUAAUUAGUCGUAc CGUAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCCU.......................-.AAA.......................-GAUGUGGCA-.............AAAU......................................................................................-UGCAA...-CUAAGUAGUCAAAa GAUAUACAUAUAGAGA.AG.GUU.........--AA.....................................GACC.U.CAGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCUA.......................-.GAA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAACUAGUCAAAa AAUAUACAUUAAGAGA.AG.GUU.........--AA.....................................GACC.U.CAGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...CUAAAUAGUCAGAA. AAUAUACAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CAGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...CUAAAUAGUCAGAA. CUUAUACAUUAAGAGA.AG.GUU.........--AA.....................................GACC.U.CAGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAACUAGUCAAAa AAUAUACAUUAAGAGA.AG.GUU.........--AA.....................................GACC.U.CAGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAACUAGUCAAAa AAUAUACAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CAGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GGAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa AACAUACAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CAGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa ACUAGACAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CAGCA.ACC.U..GGA......UGGCUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa AGUAGACAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CAGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...CUAAAUAGUCAGAA. AUUAGACAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CAGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa AGUAGACAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CAGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa AAGAAGCAUGUAGAGA.AG.GUU.........--AA.....................................GACC.U.CAGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...CUAAAUAGUCAGAA. AGUAAGCAUAUUGAGA.AG.GUU.........--AA.....................................GACC.U.CAGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...CUAAAUAGUCAGAA. AAUAAGCAUAUAGAGA.AG.GUU.........--AA.....................................GACC.U.CAGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...CUAAAUAGUCAGAA. AGUAAGCAUAUAGAGA.AG.GUU.........--AA.....................................GACC.U.CAGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...CUAAAUAGUCAGAA. CAUAAGCAUAUAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCCU.......................-.GAA.......................-CAUGUGGCA-.............GAAA......................................................................................-UGCAA...CUAAUUAGUCGAAG. UGUAAGCAUAUAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCCU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAg CAUAAGCAUAUAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCCU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAg AAGAAGCAUAUAGAGA.AG.GUU.........-U-A.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUA.......................-.AUA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAUUAGUCAAAc UUUAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGGCUA......................UCCA..AGGUGCCU.......................-.AAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAGUAGUCAAAa UCUAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUU.......................-.GGA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa AUAAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......UGACUA......................UCCA..AGGUGCUC.......................-.GGA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAGUAGUCAACa AUAAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..AGA......UGACUA......................UCCA..AGGUGCUC.......................-.AGA.......................-AAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAAUAGUCAAAa AUUAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......AGACUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAUUAGUCAAAa ACUAAGCAUAAAGAGA.AG.GUU.........--AA.....................................GACC.U.CGGCA.ACC.U..GGA......AGGCUA......................UCCA..AGGUGCUU.......................-.GAA.......................-GAUGUGGCA-.............GAAA......................................................................................-UGCAA...-CUAAUUAGUCAAAa

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