Rfam: Seed sequence alignment for RF01725

URS0000AB99F3_12908/1-96 unclassified sequences 0.0 URS0000AB2D3C_12908/1-97 unclassified sequences 0.0 URS0000AB7098_12908/1-97 unclassified sequences 0.0 URS0000AB56E5_12908/1-96 unclassified sequences 0.0 URS0000AB46CF_12908/1-96 unclassified sequences 0.0 URS0000ABD196_12908/1-96 unclassified sequences 0.0 URS0000ABB042_12908/1-96 unclassified sequences 0.0 URS0000ABC433_12908/1-96 unclassified sequences 0.0 URS0000ABBCD0_12908/1-97 unclassified sequences 0.0 URS0000AB3D1C_12908/1-96 unclassified sequences 0.0 URS0000ABBE41_12908/1-96 unclassified sequences 0.0 URS0000AB4EAD_12908/1-96 unclassified sequences 0.0 URS0000AB1E4F_12908/1-96 unclassified sequences 0.0 URS0000AB6010_12908/1-96 unclassified sequences 0.0 URS0000AB88E5_12908/1-96 unclassified sequences 0.0 URS0000AB29B6_12908/1-96 unclassified sequences 0.0 URS0000AB7DFC_12908/1-96 unclassified sequences 0.0 URS0000AB3173_12908/1-95 unclassified sequences 0.0 URS0000ABBC83_12908/1-95 unclassified sequences 0.0 URS0000ABD779_12908/1-95 unclassified sequences 0.0 URS0000ABC5CE_12908/1-96 unclassified sequences 0.0 URS0000AB3B61_12908/1-96 unclassified sequences 0.0 URS0000AB1A99_12908/1-96 unclassified sequences 0.0 URS0000AB960E_12908/1-96 unclassified sequences 0.0 URS0000ABB5C4_12908/1-96 unclassified sequences 0.0 URS0000ABACC9_12908/1-95 unclassified sequences 0.0 URS0000AB9C84_12908/1-97 unclassified sequences 0.0 URS0000AB8734_12908/1-97 unclassified sequences 0.0 URS0000AB929A_12908/1-95 unclassified sequences 0.0 URS0000AB5697_12908/1-107 unclassified sequences 0.0

AGCAAGCAUCUUGAGU.GA.GAU.........UAAA.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAGU.......................-GAUGCGGUU-.............AACC......................................................................................-AACAA...UUAAAGGAGUAAAA. UAUUGGUAUCAAGAGC.GG.GAU.........UAAA.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAA.......................UGAUGCGGUU-.............AACC......................................................................................-AACAA...CCAAAGGAGUCUAA. AGGAUUCAUCAAGAGU.GA.GAU.........UAGA.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAA.......................UGAUGUGGUU-.............AAUC......................................................................................-AACAA...CUAAAGGAGUUAUA. GAUAUACAUCAAGAGC.GA.GAU.........UAAA.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAU.......................-GAUGUGGUU-.............AACC......................................................................................-AACAA...AUAAAGGAGUUAAA. GAUAUUCAUCAAGAGU.GA.GAU.........UAAA.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAU.......................-GAUGGGGUU-.............AAUC......................................................................................-AACAA...UUAAAGGAGUAAGA. AGUGUUCAUCAAGAGU.GG.GAU.........UUAG.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAU.......................-GAUGUGGUU-.............AACC......................................................................................-AACAA...AUAAAGGAGUUAAA. UUCUGGCAUCUAGAGC.GA.GAU.........UAAA.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAU.......................-GAUGCGGUU-.............AACC......................................................................................-AACAA...AUAAAGGAGUUAAA. AUUUUGCAUCUUGAGA.GA.GAU.........UAAG.....................................UUCU.C.CUCCA.ACC.U..ACC......AACUCC......................GGCA..AGGUGGAA.......................-aAAU.......................-GAUGUGGUU-.............AACC......................................................................................-AACAA...AUAAAGGAGUUAAA. AAAGUUCAUCAAGAGU.GA.GAU.........UAAG.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAA.......................UGAUGUGGUU-.............AAUC......................................................................................-AACAA...AUAAUGGAGAUGCA. GACAUGCAUCAAGAGU.AG.AGU.........UAAG.....................................UCUC.U.CUCCA.ACC.U..GCC......ACUCC-......................GGCA..AGGUGGAA.......................AaAA-.......................AGAUGUGGUU-.............AACC......................................................................................-AACAA...AUAAUGGAGUUAAA. UAUCAGCAUCAAGAGU.AG.GAU.........UAAA.....................................UUCC.U.CUCCA.ACC.U..GCC......ACUCC-......................GGCA..AGGUGGAA.......................-aAAA.......................UGAUGUGGUU-.............AACC......................................................................................-AACAA...CUAAAGGAGUUAAA. CAAUAGCAUCAAGAGC.AG.GAU.........UAAA.....................................UUCC.U.CUCCA.ACC.U..GCC......ACUCC-......................GGCA..AGGUGGAA.......................-aAAA.......................UGAUGUGGUU-.............AACC......................................................................................-AACAA...CUAAAGGAGUUAAA. AUCGAACAUCAAGAGU.GA.GAU.........UAAG.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-uAAA.......................-GAUGUGGUU-.............AAUC......................................................................................-AACAA...AUAUAGGAGUAAAC. AUUGAACAUCAAGAGU.GG.GAU.........UAAG.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAGC.......................-GAUGUGGUU-.............AACC......................................................................................-AACAA...CUAAAGGAGAAAAA. AUCGUACAUCAAGAGU.GA.GAU.........UAAG.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAGA.......................-GAUGUGGUU-.............AAUC......................................................................................-AACAA...CUAAAGGAGAAAAA. AUUGGACAUCAAGAGU.GA.GAU.........UAAG.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAGU.......................-GAUGUGGUU-.............AAUC......................................................................................-AACAA...AUAAAGGAGUAAAA. AUCGAACAUCAAGAGU.GA.GAU.........UAAG.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAGU.......................-GAUGUGGUU-.............AAUC......................................................................................-AACAA...AUAAAGGAGAAAAA. AAGAUACAUCAAGAGC.AG.GAU.........UAAG.....................................UUCC.U.CUCCA.ACC.U..GCC......ACUCC-......................GGCA..AGGUGGAA.......................-aAAA.......................-GAUGUGGUU-.............AACC......................................................................................-AACAA...UUAAAGGAGUUAAA. AAGAUACAUCAAGAGU.GA.GAU.........UAAG.....................................UUCU.C.CUCCA.ACC.U..GCC......ACUCC-......................GGCA..AGGUGGAA.......................-aAAA.......................-GAUGUGGUU-.............AACC......................................................................................-AACAA...UUAAAGGAGUUAAA. UUUGUACAUCAAGAGU.GA.GAU.........UAAG.....................................UUCU.C.CUCCA.ACC.U..GCC......ACUCC-......................GGCA..AGGUGGAA.......................-aAAA.......................-GAUGUGGUU-.............AACC......................................................................................-AACAA...UUAAAGGAGUUAAA. AAUAUACAUCAAGAGC.GA.GAU.........UAAG.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAU.......................-GAUGAGGUU-.............UAUC......................................................................................-AACAA...AUAAAGGAGUUAAA. AAUUUGCAUCAAGAGU.GA.GAU.........UAAU.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAGU.......................-GAUGCGGUU-.............AUUC......................................................................................-AACAA...UUAAAGGAGUAGAA. GGUUUGAAUCUAGAGC.AG.GAU.........UAAA.....................................UUCC.U.CUCCA.ACC.U..GCC......CUCUCC......................GGCA..AGGUGGAA.......................-aAGU.......................-GAUUCGGUU-.............AACC......................................................................................-AACAA...AUAAAGGAGUUAAA. UUACUGCAUCAAGAGU.AG.AGU.........UUAG.....................................UCUC.U.CUCCA.ACC.U..GCC......CACUCC......................GGUA..AGGUGGAA.......................-aAAG.......................UGAUGCGGCA-.............UU-C......................................................................................-UGCAA...UACAAGGAGGAAGA. AAUUAGUAUCAAGAGC.AG.AGU.........UAAG.....................................UCUC.U.CUCCA.ACC.U..GCC......AACUCC......................GGUA..AGGUGGAA.......................-aAAU.......................UGAUGCGGCA-.............UU-C......................................................................................-UGCAA...UACAAGGAGAAAGA. CCAGUGUAUCAAGAGU.GA.GAU.........UAAA.....................................UUCU.C.CUCCA.ACC.U..GCC......CACUCC......................GGUA..AGGUGGAA.......................-aAAC.......................-GAUACGGCA-.............AU-C......................................................................................-UGCAA...UACAAGGAGGAAAC. ACAAAACAUCAAGAA-.AG.AGU........gAUGA....................................cACUC.U.UACCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGUU.......................-uAAA.......................CGAUGUGGCU-.............UU-C......................................................................................-AGCAA...CUAAAGGAGGUAAU. AGGAAACAUCAAGAA-.AG.AGU........gAUGA....................................cACUC.U.UACCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGUU.......................-uAAA.......................CGAUGUGGCU-.............UU-C......................................................................................-AGCAA...CUAAAGGAGGUAAU. AUAGAGUAUCAAGAGU.AG.AGU.........GAA-.....................................ACUC.U.CGCCA.ACC.U..GCC......UACCCG......................GGCA..AGGUGGUA.......................-aAAA.......................-GAUGCGGCU-.............AACC......................................................................................-GGCAA...CCAAACGGGGACCC. AUCUUUCAUCAAGAGC.UG.GGC.........CGAC.....................................GCCC.A.CGCCA.ACC.U..GCC......CCGCCC.....................gGGCA..AGGUGGAUcg....................cG.AA-ag....................cGGAUGUGGCUU.............CUAA.......................................................................c.............gAAGCAA...CCAAGCGGGUCAAG.