Rfam: Seed sequence alignment for RF01725

URS0000AB165D_12908/1-95 unclassified sequences 0.0 URS0000AB3ACC_12908/1-95 unclassified sequences 0.0 URS0000AB4C39_12908/1-95 unclassified sequences 0.0 URS0000AB868E_12908/1-95 unclassified sequences 0.0 URS0000AB3FE8_12908/1-95 unclassified sequences 0.0 URS0000AB8D64_12908/1-95 unclassified sequences 0.0 URS0000AB1760_12908/1-97 unclassified sequences 0.0 URS0000AB8C7F_12908/1-98 unclassified sequences 0.0 URS0000AB89B6_12908/1-97 unclassified sequences 0.0 URS0000AB1A22_12908/1-93 unclassified sequences 0.0 URS0000D6B3DD_12908/1-94 unclassified sequences 0.0 URS0000ABC62F_12908/1-96 unclassified sequences 0.0 URS0000AB432F_12908/1-96 unclassified sequences 0.0 URS0000AB3E0F_12908/1-96 unclassified sequences 0.0 URS0000AB5349_12908/1-96 unclassified sequences 0.0 URS0000ABA80A_12908/1-97 unclassified sequences 0.0 URS0000ABB0E9_12908/1-97 unclassified sequences 0.0 URS0000AB188C_12908/1-97 unclassified sequences 0.0 URS0000AB706F_12908/1-96 unclassified sequences 0.0 URS0000ABC457_12908/1-97 unclassified sequences 0.0 URS0000AB2606_12908/1-96 unclassified sequences 0.0 URS0000ABAE58_12908/1-96 unclassified sequences 0.0 URS0000AB2BBB_12908/1-95 unclassified sequences 0.0 URS0000ABB378_12908/1-96 unclassified sequences 0.0 URS0000AB7790_12908/1-97 unclassified sequences 0.0 URS0000AB600D_12908/1-98 unclassified sequences 0.0 URS0000AB16DF_12908/1-96 unclassified sequences 0.0 URS0000AB57B2_12908/1-96 unclassified sequences 0.0 URS0000ABB691_12908/1-97 unclassified sequences 0.0 URS0000AB5DD2_12908/1-97 unclassified sequences 0.0

UCAAAAUAUCACGAGA.AG.GGU.........UUGC.....................................AUCC.U.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAU.......................-GAUAUGGCG-.............-UUC......................................................................................-AGCAA...ACAUAGGAGAAUAG. GUUGAAUAUCACGAGA.AG.GAU.........UUAU.....................................AUCC.U.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAU.......................-GAUAUGGCG-.............-UUC......................................................................................-AGCAA...ACAUAGGAGGAAAA. GUCGAAUAUCACGAGA.AG.GAU.........UUAU.....................................AUCC.U.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAU.......................-GAUAUGGCG-.............-UUC......................................................................................-AGCAA...UCAUAGGAGGAAAU. UAUGUAUAUCAUGAGA.AG.GAU.........UUAU.....................................UUCC.U.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAA.......................-GAUAUGGC--.............GUUC......................................................................................-GGCAA...AUAAAGGAGGAAAG. AAUAUAUAUCAUGAGA.AG.GAU.........UUAU.....................................UUCC.U.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAA.......................-GAUAUGGCG-.............-UUC......................................................................................-AGCAA...AUAAAGGAGGUAUG. AAUAUAUAUCAUGAGA.AG.GAU.........UUAU.....................................UUCC.U.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAA.......................-GAUAUGGCG-.............-UUC......................................................................................-AGCAA...AUAAUGGAGGUGUG. GUCAGGUAUCAAGAGU.AG.GAU.........UAAA.....................................UUCC.U.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAG.......................UGAUACGGUUG.............-UU-......................................................................................CAACAA...AAAUAGGAGUAACU. ACAAUGUAUUAAGAGU.GA.GAU.........UAAG.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAU.......................-GAUACGGUUU.............UUAU......................................................................................UAACAA...CAAAUGGAGGUUCA. CAUCAACAUCAAGAGA.AA.GAU.........UGGG.....................................UUCU.U.CUCCA.ACC.U..GCU......AACUCA......................GGCA..AGGUGGAA.......................UaAAA.......................-GAUGUGGUU-.............AACC......................................................................................-AACAA...UUAAAUGAGGUAAU. UUAAAACAUCAUGAG-.AG.AUU.........--AA.....................................AUUC.U.CACCA.ACC.U..GCU......GACUCC......................AGCA..AGGUGGUA.......................-aAAA.......................-GAUGUGGUU-.............AACC......................................................................................-AACAA...CUAAAGGAGUUAAA. AUUAUUCAUCAAGAGU.AA.GAU.........UAAU.....................................UUCU.U.CUCCA.ACC.U..GCC......AGCUCC......................GGCA..AGGUGGAA.......................-aAAU.......................-GAUGAGGCA-.............-AUC......................................................................................-AGCAA..u-AUAGGAGAAAGG-. ACCCUGUAUCUUGAGC.AG.GAU.........UUAA.....................................UUCC.U.CUCCA.ACC.U..GCC......UACUCC......................GGCA..AGGUGGAA.......................-aAAC.......................-GAUACGGUU-.............AAUC......................................................................................-AACAA...UUAAAGGAGAGAAA. ACCUUGUAUCUUGAGC.AG.GAU.........UUAG.....................................UUCC.U.CUCCA.ACC.U..GCC......UACUCC......................GGCA..AGGUGGAA.......................-aAAC.......................-GAUACGGUU-.............AAUC......................................................................................-AACAA...UUAAAGGAGAGAAA. UUUUUGUAUCUUGAGC.AG.GAU.........UUAA.....................................UUCC.U.CUCCA.ACC.U..GCC......UACUCC......................GGCA..AGGUGGAA.......................-aAAC.......................-GAUACGGUU-.............AAUC......................................................................................-AACAA...UUUAAGGAGAAAAA. AAUAUGCAUUAAGAGU.GA.GAU.........UAAU.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAGU.......................-GAUGCGGUU-.............AUUC......................................................................................-AACAA...UAAAGGAGUAGAAA. AAGUGGUAUCAAGAGC.AG.AGU.........UAAG.....................................UCUC.U.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................CaAAU.......................-GAUGCGGUUG.............-UU-......................................................................................CAACAA...UUAAAGGAGAUAAA. GAGAAGCAUUAAGAGC.AG.AGU.........UAAG.....................................CCUC.U.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................CaAAU.......................-GAUGCGGUUG.............-UU-......................................................................................CAACAA...AUAAUGGAGAUAAA. AAAAAGCAUCAAGAGC.AG.AGU.........UAAG.....................................UCUC.U.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................CaAAU.......................-GAUGCGGUUG.............-UU-......................................................................................CAACAA...AUAAUGGAGAUAAA. AAAAAUCAUCAAGAGU.GA.GAU.........UAGG.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAA.......................-GAUGAGGUU-.............AAUC......................................................................................-AACAA..g-UAUAGGAGUGUUA. AUAGAGCAUUAAGAGC.AG.GGU.........UAAA.....................................UCCC.U.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAA.......................UGAUGCGGUU-.............AACC......................................................................................-AACAA...ACAUAGGAGUACAA. AAAUUGUAUCAAGAGC.AG.GAU.........UUAA.....................................UUCC.U.CUCCA.ACC.U..ACC......UACUCC......................GGCA..AGGUGGAA.......................-aAAU.......................-GAUGCGGUU-.............AAUC......................................................................................-AACAA...UUAAUGGAGGUAAC. AAUGUGUAUCUAGAGC.AG.GAU.........UAAA.....................................UUCC.U.CUCCA.ACC.U..GCC......UACUCC......................GGCA..AGGUGGAA.......................-aAAU.......................-GAUGCGGUU-.............AACC......................................................................................-AACAA...UUAAUGGAGUUAUA. AAUGCGUAUCUAGAGC.AG.GAU.........UAAA.....................................UUCC.U.CUCCA.ACC.U..GCC......ACUCC-......................GGCA..AGGUGGAA.......................-aAAU.......................-GAUGCGGUU-.............AACC......................................................................................-AACAA...UUAAUGGAGUUAUA. UAUAAGCAUCAAGAGC.GA.GAU.........UAAU.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAGU.......................-GAUGCGGUU-.............AUUC......................................................................................-AACAA...UUAAAGGAGUAGAA. CUAAUACAUCAAGAGA.GA.GAU.........UAAG.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-aAAA.......................UGAUGUGGUU-.............AACC......................................................................................-AACAA...ACAUAGGAGUACAA. CCAAUACAUCAAGAGA.GA.GAU.........UAAG.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................A.AAAa......................UGAUGUGGUU-.............AACC......................................................................................-AACAA...ACAUUGGAGUACAA. UUAAAGUAUCAAGAGA.AG.GAU.........UAAA.....................................UUCC.U.CUCCA.ACC.U..GCC......AACUCC......................GGUA..AGGUGGAA.......................-aAAA.......................-GAUACGGUU-.............AACC......................................................................................-AACAA...UUAAAGGAGCAAUA. UUAAUGUAUCAAGAGA.AG.GAU.........UAAA.....................................UUCC.U.CUCCA.ACC.U..GCC......AACUCC......................GGUA..AGGUGGAA.......................-aAAA.......................-GAUGCGGUU-.............AACC......................................................................................-AACAA...UUAAAGGAGUUAAA. UUUAUGCAUUAAGAGC.AG.GAU.........UAAU.....................................UUCC.U.CUCCA.ACC.U..GCC......AACUCC......................GGUA..AGGUGGAA.......................-aAAA.......................UGAUGCGGUU-.............AACC......................................................................................-AACAA...CUAUAGGAGCUAAA. AGGAUUCAUCAAGAGU.GG.GAU.........UAAG.....................................UUCU.C.CUCCA.ACC.U..GCC......AACUCC......................GGCA..AGGUGGAA.......................-cAAG.......................UGAUGAGGUU-.............AACC......................................................................................-AACAA...CUAAUGGAGUUACA.