# Species tree for RF03160 # Generated from Rfam version 15.00 | +--Eukaryota (6981) | +--Euglenozoa (1) | | | +--Kinetoplastida (1) | | | +--Trypanosomatidae (1) | | | +--Trypanosoma (1) | | | +--Trypanosoma cruzi strain CL Brener (1) | +--Metazoa (5601) | | | +--Cnidaria (5) | | | | | +--Hydrozoa (2) | | | | | | | +--Hydroida (2) | | | | | | | +--Leptomedusae (2) | | | | | | | +--Campanulariidae (2) | | | | | | | +--Clytia hemisphaerica (2) | | | | | +--Anthozoa (3) | | | | | +--Hexacorallia (3) | | | | | +--Scleractinia (3) | | | | | +--Astrocoeniina (1) | | | | | | | +--Pocilloporidae (1) | | | | | | | +--Pocillopora damicornis (1) | | | | | +--Caryophylliina (2) | | | | | +--Caryophylliidae (2) | | | | | +--Lophelia pertusa (2) | | | +--Chordata (47) | | | | | +--Craniata (47) | | | | | +--Vertebrata (47) | | | | | +--Euteleostomi (47) | | | | | +--Lepidosauria (1) | | | | | | | +--Squamata (1) | | | | | | | +--Scleroglossa (1) | | | | | | | +--Serpentes (1) | | | | | | | +--Colubroidea (1) | | | | | | | +--Colubridae (1) | | | | | | | +--Natricinae (1) | | | | | | | +--Thamnophis sirtalis (1) | | | | | +--Actinopterygii (46) | | | | | +--Neopterygii (46) | | | | | +--Teleostei (46) | | | | | +--Ostariophysi (6) | | | | | | | +--Cypriniformes (2) | | | | | | | | | +--Cyprinidae (2) | | | | | | | | | +--Cyprinus carpio carpio (1) | | | | | | | | | +--Cyprinus carpio (common carp) (1) | | | | | | | +--Characiformes (4) | | | | | | | +--Characidae (4) | | | | | | | +--Characidaeincertaesedis (4) | | | | | | | +--Astyanaxclade (4) | | | | | | | +--Astyanax mexicanus (Mexican tetra) (4) | | | | | +--Euteleostei (40) | | | | | +--Neoteleostei (40) | | | | | +--Acanthomorpha (40) | | | | | +--Acanthopterygii (40) | | | | | +--Percomorpha (40) | | | | | +--Perciformes (16) | | | | | | | +--Labroidei (16) | | | | | | | +--Pomacentridae (13) | | | | | | | | | +--Acanthochromis polyacanthus (1) | | | | | | | | | +--Stegastes partitus (bicolor damselfish) (12) | | | | | | | +--Cichlidae (3) | | | | | | | +--Africancichlids (3) | | | | | | | +--Pseudocrenilabrinae (3) | | | | | | | +--Haplochromini (1) | | | | | | | | | +--Haplochromis burtoni (1) | | | | | | | +--Lamprologini (1) | | | | | | | | | +--Neolamprologus brichardi (1) | | | | | | | +--Tilapiini (1) | | | | | | | +--Oreochromis aureus (1) | | | | | +--Atherinomorpha (24) | | | | | +--Beloniformes (24) | | | | | +--Adrianichthyidae (24) | | | | | +--Oryziinae (24) | | | | | +--Oryzias sinensis (12) | | | | | +--Oryzias javanicus (1) | | | | | +--Oryzias melastigma (Indian medaka) (4) | | | | | +--Oryzias latipes (Japanese medaka) (7) | | | +--Arthropoda (43) | | | | | +--Hexapoda (12) | | | | | | | +--Insecta (12) | | | | | | | +--Pterygota (12) | | | | | | | +--Neoptera (12) | | | | | | | +--Endopterygota (10) | | | | | | | | | +--Lepidoptera (1) | | | | | | | | | | | +--Glossata (1) | | | | | | | | | | | +--Ditrysia (1) | | | | | | | | | | | +--Papilionoidea (1) | | | | | | | | | | | +--Papilionidae (1) | | | | | | | | | | | +--Parnassiinae (1) | | | | | | | | | | | +--Parnassini (1) | | | | | | | | | | | +--Parnassius (1) | | | | | | | | | | | +--Parnassius apollo (apollo) (1) | | | | | | | | | +--Coleoptera (2) | | | | | | | | | | | +--Polyphaga (2) | | | | | | | | | | | +--Elateriformia (1) | | | | | | | | | | | | | +--Elateroidea (1) | | | | | | | | | | | | | +--Lampyridae (1) | | | | | | | | | | | | | +--Lampyrinae (1) | | | | | | | | | | | | | +--Photinus pyralis (common eastern firefly) (1) | | | | | | | | | | | +--Cucujiformia (1) | | | | | | | | | | | +--Chrysomeloidea (1) | | | | | | | | | | | +--Chrysomelidae (1) | | | | | | | | | | | +--Bruchinae (1) | | | | | | | | | | | +--Bruchini (1) | | | | | | | | | | | +--Acanthoscelides obtectus (1) | | | | | | | | | +--Diptera (7) | | | | | | | | | +--Brachycera (7) | | | | | | | | | +--Stratiomyomorpha (7) | | | | | | | | | +--Stratiomyidae (7) | | | | | | | | | +--Hermetiinae (7) | | | | | | | | | +--Hermetia illucens (7) | | | | | | | +--Paraneoptera (2) | | | | | | | +--Hemiptera (2) | | | | | | | +--Euhemiptera (2) | | | | | | | +--Heteroptera (2) | | | | | | | +--Panheteroptera (2) | | | | | | | +--Pentatomomorpha (2) | | | | | | | +--Pentatomoidea (2) | | | | | | | +--Pentatomidae (2) | | | | | | | +--Pentatominae (2) | | | | | | | +--Nezara viridula (southern green stink bug) (2) | | | | | +--Crustacea (31) | | | | | +--Malacostraca (31) | | | | | +--Eumalacostraca (31) | | | | | +--Eucarida (31) | | | | | +--Decapoda (31) | | | | | +--Pleocyemata (31) | | | | | +--Astacidea (31) | | | | | +--Nephropoidea (31) | | | | | +--Nephropidae (31) | | | | | +--Homarus americanus (American lobster) (31) | | | +--Mollusca (24) | | | | | +--Gastropoda (3) | | | | | | | +--Heterobranchia (3) | | | | | | | +--Euthyneura (3) | | | | | | | +--Panpulmonata (3) | | | | | | | +--Eupulmonata (3) | | | | | | | +--Stylommatophora (3) | | | | | | | +--Sigmurethra (3) | | | | | | | +--Helicoidea (3) | | | | | | | +--Hygromiidae (3) | | | | | | | +--Candidula unifasciata (3) | | | | | +--Bivalvia (21) | | | | | +--Pteriomorphia (21) | | | | | +--Mytiloida (20) | | | | | | | +--Mytiloidea (20) | | | | | | | +--Mytilidae (20) | | | | | | | +--Mytilinae (20) | | | | | | | +--Mytilus galloprovincialis (Mediterranean mussel) (4) | | | | | | | +--Mytilus coruscus (8) | | | | | | | +--Mytilus edulis (8) | | | | | +--Pectinoida (1) | | | | | +--Pectinoidea (1) | | | | | +--Pectinidae (1) | | | | | +--Mizuhopecten yessoensis (Yesso scallop) (1) | | | +--Rotifera (1) | | | | | +--Bdelloidea (1) | | | | | +--Adinetida (1) | | | | | +--Adinetidae (1) | | | | | +--Adineta ricciae (1) | | | +--Platyhelminthes (5481) | | | +--Trematoda (5481) | | | +--Digenea (5481) | | | +--Strigeidida (5481) | | | +--Schistosomatoidea (5481) | | | +--Schistosomatidae (5481) | | | +--Schistosoma japonicum (253) | | | +--Schistosoma haematobium (1058) | | | +--Schistosoma curassoni (641) | | | +--Schistosoma mansoni (1670) | | | +--Schistosoma bovis (553) | | | +--Schistosoma mattheei (646) | | | +--Schistosoma margrebowiei (660) | +--Fungi (2) | | | +--Fungiincertaesedis (2) | | | +--Basalfungallineages (2) | | | +--Olpidiaceae (2) | | | +--Olpidium bornovanus (2) | +--Viridiplantae (1280) | | | +--Streptophyta (1280) | | | +--Embryophyta (1264) | | | | | +--Tracheophyta (1264) | | | | | +--Spermatophyta (1264) | | | | | +--Magnoliophyta (1264) | | | | | +--Liliopsida (630) | | | | | | | +--Araceae (2) | | | | | | | | | +--Lemnoideae (1) | | | | | | | | | | | +--Spirodela intermedia (1) | | | | | | | | | +--Aroideae (1) | | | | | | | | | +--Colocasieae (1) | | | | | | | | | +--Colocasia esculenta (taro) (1) | | | | | | | +--Poales (588) | | | | | | | | | +--Cyperaceae (7) | | | | | | | | | | | +--Cyperoideae (7) | | | | | | | | | | | +--Cariceae (7) | | | | | | | | | | | +--Kobresia littledalei (7) | | | | | | | | | +--Poaceae (581) | | | | | | | | | +--PACMADclade (16) | | | | | | | | | | | +--Panicoideae (12) | | | | | | | | | | | | | +--Paniceae (12) | | | | | | | | | | | | | +--Paspalum vaginatum (2) | | | | | | | | | | | | | +--Setaria viridis (2) | | | | | | | | | | | | | +--Panicum miliaceum (proso millet) (6) | | | | | | | | | | | | | +--Setaria italica (foxtail millet) (2) | | | | | | | | | | | +--Chloridoideae (4) | | | | | | | | | | | +--Eragrostideae (4) | | | | | | | | | | | +--Eragrostidinae (4) | | | | | | | | | | | +--Eragrostis curvula (weeping love grass) (4) | | | | | | | | | +--BEPclade (565) | | | | | | | | | +--Pooideae (564) | | | | | | | | | | | +--Triticeae (564) | | | | | | | | | | | +--Triticum durum (durum wheat) (226) | | | | | | | | | | | +--Aegilops tauschii subsp. strangulata (33) | | | | | | | | | | | +--Hordeum vulgare subsp. vulgare (domesticated barley) (17) | | | | | | | | | | | +--Triticum urartu (26) | | | | | | | | | | | +--Triticum aestivum (bread wheat) (262) | | | | | | | | | +--Ehrhartoideae (1) | | | | | | | | | +--Oryzeae (1) | | | | | | | | | +--Oryza sativa Japonica Group (1) | | | | | | | +--Dioscoreales (2) | | | | | | | | | +--Dioscoreaceae (2) | | | | | | | | | +--Dioscorea zingiberensis (2) | | | | | | | +--Zingiberales (38) | | | | | | | +--Zingiberaceae (38) | | | | | | | +--Zingiber officinale (38) | | | | | +--eudicotyledons (633) | | | | | | | +--coreeudicotyledons (376) | | | | | | | | | +--rosids (338) | | | | | | | | | | | +--fabids (297) | | | | | | | | | | | | | +--Malpighiales (11) | | | | | | | | | | | | | | | +--Euphorbiaceae (11) | | | | | | | | | | | | | | | +--Crotonoideae (11) | | | | | | | | | | | | | | | +--Manihoteae (1) | | | | | | | | | | | | | | | | | +--Manihot esculenta (cassava) (1) | | | | | | | | | | | | | | | +--Jatropheae (1) | | | | | | | | | | | | | | | | | +--Jatropha curcas (1) | | | | | | | | | | | | | | | +--Micrandreae (9) | | | | | | | | | | | | | | | +--Hevea brasiliensis (9) | | | | | | | | | | | | | +--Fabales (85) | | | | | | | | | | | | | | | +--Fabaceae (85) | | | | | | | | | | | | | | | +--Caesalpinioideae (3) | | | | | | | | | | | | | | | | | +--Cassieae (3) | | | | | | | | | | | | | | | | | +--Senna tora (3) | | | | | | | | | | | | | | | +--Papilionoideae (82) | | | | | | | | | | | | | | | +--Phaseoleae (3) | | | | | | | | | | | | | | | | | +--Glycine soja (1) | | | | | | | | | | | | | | | | | +--Glycine max (soybean) (2) | | | | | | | | | | | | | | | +--Dalbergieae (79) | | | | | | | | | | | | | | | +--Arachis duranensis (36) | | | | | | | | | | | | | | | +--Arachis hypogaea (peanut) (43) | | | | | | | | | | | | | +--Rosales (197) | | | | | | | | | | | | | | | +--Rosaceae (194) | | | | | | | | | | | | | | | | | +--Maloideae (194) | | | | | | | | | | | | | | | | | +--Maleae (190) | | | | | | | | | | | | | | | | | | | +--Malus baccata (131) | | | | | | | | | | | | | | | | | | | +--Malus x domestica (59) | | | | | | | | | | | | | | | | | +--Amygdaleae (4) | | | | | | | | | | | | | | | | | +--Prunus armeniaca (apricot) (1) | | | | | | | | | | | | | | | | | +--Prunus dulcis (almond) (1) | | | | | | | | | | | | | | | | | +--Prunus persica (peach) (1) | | | | | | | | | | | | | | | | | +--Prunus avium (sweet cherry) (1) | | | | | | | | | | | | | | | +--Moraceae (1) | | | | | | | | | | | | | | | | | +--Morus notabilis (1) | | | | | | | | | | | | | | | +--Rhamnaceae (2) | | | | | | | | | | | | | | | +--Paliureae (2) | | | | | | | | | | | | | | | +--Ziziphus jujuba var. spinosa (1) | | | | | | | | | | | | | | | +--Ziziphus jujuba (1) | | | | | | | | | | | | | +--Oxalidales (2) | | | | | | | | | | | | | | | +--Cephalotaceae (2) | | | | | | | | | | | | | | | +--Cephalotus follicularis (2) | | | | | | | | | | | | | +--Celastrales (2) | | | | | | | | | | | | | +--Celastraceae (2) | | | | | | | | | | | | | +--Tripterygium wilfordii (2) | | | | | | | | | | | +--malvids (41) | | | | | | | | | | | +--Sapindales (6) | | | | | | | | | | | | | +--Rutaceae (4) | | | | | | | | | | | | | | | +--Citrus sinensis (2) | | | | | | | | | | | | | | | +--Citrus clementina (1) | | | | | | | | | | | | | | | +--Citrus unshiu (1) | | | | | | | | | | | | | +--Aceraceae (2) | | | | | | | | | | | | | +--Acer saccharum (sugar maple) (1) | | | | | | | | | | | | | +--Acer yangbiense (1) | | | | | | | | | | | +--Malvales (35) | | | | | | | | | | | +--Malvaceae (35) | | | | | | | | | | | +--Grewioideae (4) | | | | | | | | | | | | | +--Corchorus capsularis (2) | | | | | | | | | | | | | +--Corchorus olitorius (2) | | | | | | | | | | | +--Byttnerioideae (3) | | | | | | | | | | | | | +--Theobroma cacao (cacao) (2) | | | | | | | | | | | | | +--Herrania umbratica (1) | | | | | | | | | | | +--Malvoideae (28) | | | | | | | | | | | +--Gossypium gossypioides (1) | | | | | | | | | | | +--Gossypium armourianum (2) | | | | | | | | | | | +--Hibiscus syriacus (1) | | | | | | | | | | | +--Gossypium hirsutum (upland cotton) (2) | | | | | | | | | | | +--Gossypium stocksii (1) | | | | | | | | | | | +--Hibiscus trionum (1) | | | | | | | | | | | +--Gossypium mustelinum (3) | | | | | | | | | | | +--Gossypium barbadense (sea-island cotton) (1) | | | | | | | | | | | +--Gossypium australe (2) | | | | | | | | | | | +--Gossypium davidsonii (2) | | | | | | | | | | | +--Gossypium schwendimanii (1) | | | | | | | | | | | +--Gossypium raimondii (1) | | | | | | | | | | | +--Gossypium trilobum (1) | | | | | | | | | | | +--Gossypium harknessii (1) | | | | | | | | | | | +--Gossypium anomalum (2) | | | | | | | | | | | +--Gossypium lobatum (1) | | | | | | | | | | | +--Gossypium klotzschianum (2) | | | | | | | | | | | +--Gossypium arboreum (2) | | | | | | | | | | | +--Gossypium laxum (1) | | | | | | | | | +--asterids (38) | | | | | | | | | +--campanulids (10) | | | | | | | | | | | +--Asterales (10) | | | | | | | | | | | +--Asteraceae (10) | | | | | | | | | | | +--Carduoideae (9) | | | | | | | | | | | | | +--Cardueae (9) | | | | | | | | | | | | | +--Carduinae (1) | | | | | | | | | | | | | | | +--Cynara cardunculus var. scolymus (1) | | | | | | | | | | | | | +--Centaureinae (8) | | | | | | | | | | | | | +--Centaurea solstitialis (8) | | | | | | | | | | | +--Asteroideae (1) | | | | | | | | | | | +--Heliantheaealliance (1) | | | | | | | | | | | +--Eupatorieae (1) | | | | | | | | | | | +--Mikania micrantha (1) | | | | | | | | | +--Ericales (1) | | | | | | | | | | | +--Theaceae (1) | | | | | | | | | | | +--Camellia sinensis (1) | | | | | | | | | +--lamiids (27) | | | | | | | | | +--Gentianales (7) | | | | | | | | | | | +--Rubiaceae (7) | | | | | | | | | | | +--Ixoroideae (7) | | | | | | | | | | | +--Coffeeae (7) | | | | | | | | | | | +--Coffea arabica (coffee) (5) | | | | | | | | | | | +--Coffea canephora (2) | | | | | | | | | +--Lamiales (11) | | | | | | | | | | | +--Lentibulariaceae (1) | | | | | | | | | | | | | +--Genlisea aurea (1) | | | | | | | | | | | +--Phrymaceae (10) | | | | | | | | | | | +--Mimulus guttatus (spotted monkey flower) (10) | | | | | | | | | +--Solanales (9) | | | | | | | | | +--Convolvulaceae (3) | | | | | | | | | | | +--Ipomoeeae (2) | | | | | | | | | | | | | +--Ipomoea nil (Japanese morning glory) (2) | | | | | | | | | | | +--Cuscuteae (1) | | | | | | | | | | | +--Cuscuta europaea (1) | | | | | | | | | +--Solanaceae (6) | | | | | | | | | +--Solanoideae (2) | | | | | | | | | | | +--Solaneae (2) | | | | | | | | | | | +--Solanum commersonii (Commerson's wild potato) (1) | | | | | | | | | | | +--Solanum (1) | | | | | | | | | | | +--Solanum lycopersicum (1) | | | | | | | | | +--Nicotianoideae (4) | | | | | | | | | +--Nicotianeae (4) | | | | | | | | | +--Nicotiana attenuata (3) | | | | | | | | | +--Nicotiana tabacum (common tobacco) (1) | | | | | | | +--Proteales (2) | | | | | | | | | +--Nelumbonaceae (1) | | | | | | | | | | | +--Nelumbo nucifera (1) | | | | | | | | | +--Proteaceae (1) | | | | | | | | | +--Protea cynaroides (1) | | | | | | | +--Ranunculales (255) | | | | | | | +--Ranunculaceae (122) | | | | | | | | | +--Aquilegia coerulea (34) | | | | | | | | | +--Thalictrum thalictroides (11) | | | | | | | | | +--Coptis chinensis (77) | | | | | | | +--Papaveraceae (76) | | | | | | | | | +--Papaver somniferum (opium poppy) (20) | | | | | | | | | +--Papaver nudicaule (43) | | | | | | | | | +--Macleaya cordata (13) | | | | | | | +--Circaeasteraceae (57) | | | | | | | +--Kingdonia uniflora (57) | | | | | +--magnoliids (1) | | | | | +--Laurales (1) | | | | | +--Lauraceae (1) | | | | | +--Cinnamomum micranthum f. kanehirae (1) | | | +--Streptophytina (16) | | | +--Embryophyta (16) | | | +--Tracheophyta (16) | | | +--Euphyllophyta (16) | | | +--Spermatophyta (16) | | | +--Magnoliopsida (14) | | | | | +--Mesangiospermae (14) | | | | | +--Liliopsida (9) | | | | | | | +--Petrosaviidae (9) | | | | | | | +--commelinids (9) | | | | | | | +--Poales (9) | | | | | | | +--Cyperaceae (2) | | | | | | | | | +--Cyperoideae (2) | | | | | | | | | +--Rhynchosporeae (2) | | | | | | | | | +--Rhynchospora breviuscula (2) | | | | | | | +--Poaceae (7) | | | | | | | +--PACMADclade (7) | | | | | | | +--Panicoideae (7) | | | | | | | +--Andropogonodae (7) | | | | | | | +--Andropogoneae (7) | | | | | | | +--Saccharinae (7) | | | | | | | +--Miscanthus lutarioriparius (7) | | | | | +--eudicotyledons (5) | | | | | +--Gunneridae (5) | | | | | +--Pentapetalae (5) | | | | | +--rosids (5) | | | | | +--fabids (5) | | | | | +--Rosales (5) | | | | | +--Rosaceae (5) | | | | | +--Amygdaloideae (5) | | | | | +--Maleae (3) | | | | | | | +--Pyrus ussuriensis x Pyrus communis (3) | | | | | +--Amygdaleae (2) | | | | | +--Prunus (2) | | | | | +--Prunus yedoensis var. nudiflora (2) | | | +--Magnoliophyta (2) | | | +--Mesangiospermae (2) | | | +--Liliopsida (2) | | | +--Petrosaviidae (2) | | | +--commelinids (2) | | | +--Poales (2) | | | +--Poaceae (2) | | | +--PACMADclade (2) | | | +--Panicoideae (2) | | | +--Panicodae (2) | | | +--Paniceae (2) | | | +--Dichantheliinae (2) | | | +--Dichanthelium oligosanthes (2) | +--Opisthokonta (97) | +--Metazoa (97) | +--Eumetazoa (97) | +--Bilateria (97) | +--Deuterostomia (2) | | | +--Chordata (2) | | | +--Craniata (2) | | | +--Vertebrata (2) | | | +--Gnathostomata (2) | | | +--Teleostomi (2) | | | +--Euteleostomi (2) | | | +--Actinopterygii (2) | | | +--Actinopteri (2) | | | +--Neopterygii (2) | | | +--Teleostei (2) | | | +--Osteoglossocephalai (2) | | | +--Clupeocephala (2) | | | +--Otomorpha (2) | | | +--Ostariophysi (2) | | | +--Otophysi (2) | | | +--Cypriniphysae (2) | | | +--Cypriniformes (2) | | | +--Cobitoidei (2) | | | +--Nemacheilidae (2) | | | +--Triplophysa rosa (cave loach) (2) | +--Protostomia (95) | +--Ecdysozoa (95) | +--Nematoda (1) | | | +--Chromadorea (1) | | | +--Rhabditida (1) | | | +--Tylenchina (1) | | | +--Panagrolaimomorpha (1) | | | +--Panagrolaimoidea (1) | | | +--Panagrolaimidae (1) | | | +--Halicephalobus (1) | | | +--Halicephalobus sp. NKZ332 (1) | +--Panarthropoda (94) | +--Arthropoda (94) | +--Mandibulata (94) | +--Pancrustacea (94) | +--Hexapoda (94) | +--Insecta (94) | +--Dicondylia (94) | +--Pterygota (94) | +--Neoptera (94) | +--Endopterygota (94) | +--Coleoptera (94) | +--Polyphaga (94) | +--Cucujiformia (94) | +--Cucujoidea (94) | +--Nitidulidae (94) | +--Meligethinae (94) | +--Brassicogethes aeneus (rape pollen beetle) (94)