# Species tree for RF02194 # Generated from Rfam version 14.10 | +--unclassifiedsequences (1) | | | +--metagenomes (1) | | | +--freshwater sediment metagenome (1) | +--Eukaryota (3) | | | +--Metazoa (2) | | | | | +--Arthropoda (2) | | | | | +--Hexapoda (2) | | | | | +--Insecta (2) | | | | | +--Pterygota (2) | | | | | +--Neoptera (2) | | | | | +--Endopterygota (2) | | | | | +--Coleoptera (1) | | | | | | | +--Polyphaga (1) | | | | | | | +--Cucujiformia (1) | | | | | | | +--Curculionidae (1) | | | | | | | +--Scolytinae (1) | | | | | | | +--Dendroctonus ponderosae (mountain pine beetle) (1) | | | | | +--Diptera (1) | | | | | +--Brachycera (1) | | | | | +--Muscomorpha (1) | | | | | +--Oestroidea (1) | | | | | +--Calliphoridae (1) | | | | | +--Luciliinae (1) | | | | | +--Lucilia cuprina (1) | | | +--Opisthokonta (1) | | | +--Fungi (1) | | | +--Dikarya (1) | | | +--Ascomycota (1) | | | +--saccharomyceta (1) | | | +--Pezizomycotina (1) | | | +--leotiomyceta (1) | | | +--sordariomyceta (1) | | | +--Sordariomycetes (1) | | | +--Hypocreomycetidae (1) | | | +--Hypocreales (1) | | | +--Cordycipitaceae (1) | | | +--Beauveria (1) | | | +--Beauveria bassiana D1-5 (1) | +--Bacteria (173) | | | +--Thermotogae (1) | | | | | +--Thermotogae (1) | | | | | +--Petrotogales (1) | | | | | +--Petrotogaceae (1) | | | | | +--Marinitoga (1) | | | | | +--Marinitoga piezophila KA3 (1) | | | +--Proteobacteria (168) | | | | | +--Epsilonproteobacteria (43) | | | | | | | +--Nitratifractor salsuginis DSM 16511 (1) | | | | | | | +--Sulfurovum sp. NBC37-1 (2) | | | | | | | +--Nautiliales (1) | | | | | | | | | +--Nautiliaceae (1) | | | | | | | | | +--Nautilia profundicola AmH (1) | | | | | | | +--Campylobacterales (39) | | | | | | | +--Helicobacteraceae (24) | | | | | | | | | +--Helicobacter hepaticus ATCC 51449 (2) | | | | | | | | | +--Helicobacter cinaedi CCUG 18818 (1) | | | | | | | | | +--Helicobacter pylori 98-10 (1) | | | | | | | | | +--Helicobacter pylori J99 (1) | | | | | | | | | +--Helicobacter pylori HPKX_438_AG0C1 (1) | | | | | | | | | +--Helicobacter pullorum MIT 98-5489 (1) | | | | | | | | | +--Helicobacter bizzozeronii CIII-1 (1) | | | | | | | | | +--Helicobacter muridarum (1) | | | | | | | | | +--Helicobacter pylori (1) | | | | | | | | | +--Helicobacter pylori P12 (1) | | | | | | | | | +--Helicobacter acinonychis str. Sheeba (1) | | | | | | | | | +--Wolinella succinogenes (1) | | | | | | | | | +--Helicobacter mustelae 12198 (1) | | | | | | | | | +--Wolinella succinogenes DSM 1740 (1) | | | | | | | | | +--Helicobacter bilis (1) | | | | | | | | | +--Helicobacter apodemus (1) | | | | | | | | | +--Helicobacter felis ATCC 49179 (1) | | | | | | | | | +--Helicobacter pylori Shi470 (1) | | | | | | | | | +--Helicobacter pylori 26695 (2) | | | | | | | | | +--Helicobacter canadensis MIT 98-5491 (1) | | | | | | | | | +--Helicobacter sp. MIT 01-6242 (1) | | | | | | | | | +--Helicobacter suis HS5 (1) | | | | | | | +--Campylobacteraceae (15) | | | | | | | +--Campylobacter mucosalis (1) | | | | | | | +--Campylobacter rectus RM3267 (2) | | | | | | | +--Campylobacter concisus (1) | | | | | | | +--Campylobacter jejuni subsp. jejuni NCTC 11168 (1) | | | | | | | +--Campylobacter upsaliensis JV21 (1) | | | | | | | +--Campylobacter showae RM3277 (1) | | | | | | | +--Campylobacter helveticus (1) | | | | | | | +--Campylobacter hominis ATCC BAA-381 (2) | | | | | | | +--Campylobacter lari RM2100 (1) | | | | | | | +--Campylobacter fetus subsp. fetus (1) | | | | | | | +--Campylobacter fetus subsp. fetus 82-40 (1) | | | | | | | +--Campylobacter gracilis RM3268 (1) | | | | | | | +--Campylobacter concisus 13826 (1) | | | | | +--Gammaproteobacteria (98) | | | | | | | +--Baumannia cicadellinicola str. Hc (Homalodisca coagulata) (1) | | | | | | | +--Pasteurellales (4) | | | | | | | | | +--Pasteurellaceae (4) | | | | | | | | | +--Haemophilus parasuis SH0165 (1) | | | | | | | | | +--Pasteurella (1) | | | | | | | | | | | +--Pasteurella bettyae CCUG 2042 (1) | | | | | | | | | +--Chelonobacter oris (1) | | | | | | | | | +--Haemophilus influenzae Rd KW20 (1) | | | | | | | +--Enterobacterales (26) | | | | | | | | | +--Yersiniaceae (2) | | | | | | | | | | | +--Rahnella (1) | | | | | | | | | | | | | +--Rahnella aquatilis CIP 78.65 = ATCC 33071 (1) | | | | | | | | | | | +--Chania (1) | | | | | | | | | | | +--Chania multitudinisentens RB-25 (1) | | | | | | | | | +--Morganellaceae (6) | | | | | | | | | | | +--Moellerella (1) | | | | | | | | | | | | | +--Moellerella wisconsensis ATCC 35017 (1) | | | | | | | | | | | +--Xenorhabdus (2) | | | | | | | | | | | | | +--Xenorhabdus poinarii G6 (1) | | | | | | | | | | | | | +--Xenorhabdus szentirmaii DSM 16338 (1) | | | | | | | | | | | +--Providencia (3) | | | | | | | | | | | +--Providencia rettgeri Dmel1 (1) | | | | | | | | | | | +--Providencia sneebia DSM 19967 (1) | | | | | | | | | | | +--Providencia burhodogranariea DSM 19968 (1) | | | | | | | | | +--Enterobacteriaceae (16) | | | | | | | | | | | +--Cedecea (1) | | | | | | | | | | | | | +--Cedecea davisae DSM 4568 (1) | | | | | | | | | | | +--Kluyvera (1) | | | | | | | | | | | | | +--Kluyvera ascorbata ATCC 33433 (1) | | | | | | | | | | | +--Yokenella (1) | | | | | | | | | | | | | +--Yokenella regensburgei ATCC 43003 (1) | | | | | | | | | | | +--Mangrovibacter sp. MFB070 (1) | | | | | | | | | | | +--Escherichia (1) | | | | | | | | | | | | | +--Escherichia vulneris NBRC 102420 (1) | | | | | | | | | | | +--Klebsiella sp. RIT-PI-d (1) | | | | | | | | | | | +--Klebsiella (5) | | | | | | | | | | | | | +--Klebsiella pneumoniae IS43 (1) | | | | | | | | | | | | | +--Klebsiella pneumoniae IS46 (1) | | | | | | | | | | | | | +--Klebsiella pneumoniae IS39 (1) | | | | | | | | | | | | | +--Klebsiella pneumoniae ISC21 (1) | | | | | | | | | | | | | +--Klebsiellapneumoniae (1) | | | | | | | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae DSM 30104 (1) | | | | | | | | | | | +--unclassifiedEnterobacteriaceae (2) | | | | | | | | | | | | | +--ant,tsetse,mealybug,aphid,etc.endosymbionts (2) | | | | | | | | | | | | | +--secondary endosymbiont of Ctenarytaina eucalypti (1) | | | | | | | | | | | | | +--Candidatus Gullanella endobia (1) | | | | | | | | | | | +--Atlantibacter (1) | | | | | | | | | | | | | +--Atlantibacter hermannii NBRC 105704 (1) | | | | | | | | | | | +--Buttiauxella (1) | | | | | | | | | | | | | +--Buttiauxella agrestis ATCC 33320 (1) | | | | | | | | | | | +--[Kluyvera] intestini (1) | | | | | | | | | +--Erwiniaceae (1) | | | | | | | | | | | +--Tatumella (1) | | | | | | | | | | | +--Tatumella ptyseos ATCC 33301 (1) | | | | | | | | | +--Hafniaceae (1) | | | | | | | | | +--Hafnia (1) | | | | | | | | | +--Hafnia alvei FB1 (1) | | | | | | | +--Aeromonadales (1) | | | | | | | | | +--Succinivibrionaceae (1) | | | | | | | | | +--Succinatimonas (1) | | | | | | | | | +--Succinatimonas sp. CAG:777 (1) | | | | | | | +--Orbales (2) | | | | | | | | | +--Orbaceae (2) | | | | | | | | | +--Gilliamella (1) | | | | | | | | | | | +--Gilliamella apicola SCGC AB-598-B02 (1) | | | | | | | | | +--Gilliamella apicola (1) | | | | | | | +--Methylococcales (3) | | | | | | | | | +--Crenotrichaceae (1) | | | | | | | | | | | +--Crenothrix sp. D3 (1) | | | | | | | | | +--Methylococcaceae (2) | | | | | | | | | +--Methyloprofundus sedimenti (2) | | | | | | | +--Alteromonadales (14) | | | | | | | | | +--Pseudoalteromonadaceae (3) | | | | | | | | | | | +--Pseudoalteromonas tunicata D2 (1) | | | | | | | | | | | +--Pseudoalteromonas atlantica T6c (1) | | | | | | | | | | | +--Pseudoalteromonas (1) | | | | | | | | | | | +--Pseudoalteromonas luteoviolacea S4054 (1) | | | | | | | | | +--Shewanellaceae (9) | | | | | | | | | | | +--Shewanella oneidensis MR-1 (1) | | | | | | | | | | | +--Shewanella baltica OS155 (1) | | | | | | | | | | | +--Shewanella baltica OS185 (1) | | | | | | | | | | | +--Shewanella frigidimarina NCIMB 400 (2) | | | | | | | | | | | +--Shewanella putrefaciens CN-32 (1) | | | | | | | | | | | +--Shewanella baltica OS195 (1) | | | | | | | | | | | +--Shewanella mangrovi (1) | | | | | | | | | | | +--Shewanella baltica OS223 (1) | | | | | | | | | +--Alteromonadaceae (2) | | | | | | | | | +--Aliiglaciecola (1) | | | | | | | | | | | +--Aliiglaciecola lipolytica E3 (1) | | | | | | | | | +--Paraglaciecola sp. S66 (1) | | | | | | | +--Legionellales (2) | | | | | | | | | +--Legionellaceae (2) | | | | | | | | | +--Legionella geestiana (1) | | | | | | | | | +--Legionella sp. 40-6 (1) | | | | | | | +--Vibrionales (3) | | | | | | | | | +--Vibrionaceae (3) | | | | | | | | | +--Vibrio caribbenthicus ATCC BAA-2122 (1) | | | | | | | | | +--Vibrio fischeri ES114 (1) | | | | | | | | | +--Enterovibrio sp. sw014 (1) | | | | | | | +--Thiotrichales (4) | | | | | | | | | +--Thiotrichaceae (2) | | | | | | | | | | | +--Beggiatoa alba B18LD (1) | | | | | | | | | | | +--Achromatium sp. WMS3 (1) | | | | | | | | | +--Piscirickettsiaceae (2) | | | | | | | | | +--Thiomicrospira crunogena XCL-2 (1) | | | | | | | | | +--Hydrogenovibrio marinus (1) | | | | | | | +--Chromatiales (1) | | | | | | | | | +--Chromatiaceae (1) | | | | | | | | | +--Rheinheimera sp. SA_1 (1) | | | | | | | +--Enterobacteriales (35) | | | | | | | | | +--Enterobacteriaceae (35) | | | | | | | | | +--Escherichia coli O127:H6 str. E2348/69 (1) | | | | | | | | | +--Leclercia adecarboxylata (1) | | | | | | | | | +--Enterobacter sp. 638 (1) | | | | | | | | | +--Escherichia fergusonii ATCC 35469 (1) | | | | | | | | | +--Kluyvera intermedia (1) | | | | | | | | | +--Xenorhabdus vietnamensis (1) | | | | | | | | | +--Enterobacter (1) | | | | | | | | | | | +--Enterobacter cloacae SCF1 (1) | | | | | | | | | +--Photorhabdus luminescens subsp. laumondii TTO1 (1) | | | | | | | | | +--Enterobacter aerogenes KCTC 2190 (1) | | | | | | | | | +--Escherichia coli IAI39 (1) | | | | | | | | | +--Proteus penneri ATCC 35198 (2) | | | | | | | | | +--Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- (1) | | | | | | | | | +--Xenorhabdus innexi (1) | | | | | | | | | +--Raoultella ornithinolytica (1) | | | | | | | | | +--Serratia (1) | | | | | | | | | | | +--Serratia symbiotica str. Tucson (1) | | | | | | | | | +--Citrobacter rodentium ICC168 (1) | | | | | | | | | +--Escherichia coli K-12 (1) | | | | | | | | | +--Xenorhabdus nematophila ATCC 19061 (1) | | | | | | | | | +--Enterobacter pulveris (1) | | | | | | | | | +--Xenorhabdus doucetiae (1) | | | | | | | | | +--Escherichia albertii TW07627 (1) | | | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (2) | | | | | | | | | +--Proteus mirabilis (1) | | | | | | | | | +--Providencia rettgeri DSM 1131 (1) | | | | | | | | | +--Serratia symbiotica (1) | | | | | | | | | +--Xenorhabdus sp. SF87 (1) | | | | | | | | | +--Shigella dysenteriae Sd197 (2) | | | | | | | | | +--Xenorhabdus beddingii (1) | | | | | | | | | +--Escherichia coli ED1a (1) | | | | | | | | | +--aphidsecondarysymbionts (3) | | | | | | | | | +--Candidatus Regiella insecticola R5.15 (1) | | | | | | | | | +--Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) (1) | | | | | | | | | +--Candidatus Regiella insecticola LSR1 (1) | | | | | | | +--Oceanospirillales (1) | | | | | | | | | +--Saccharospirillaceae (1) | | | | | | | | | +--Gynuella (1) | | | | | | | | | +--Gynuella sunshinyii YC6258 (1) | | | | | | | +--Pseudomonadales (1) | | | | | | | +--Pseudomonadaceae (1) | | | | | | | +--Oblitimonas alkaliphila (1) | | | | | +--Betaproteobacteria (8) | | | | | | | +--Burkholderiales (6) | | | | | | | | | +--Oxalobacteraceae (2) | | | | | | | | | | | +--Oxalobacter formigenes HOxBLS (2) | | | | | | | | | +--Sutterellaceae (1) | | | | | | | | | | | +--Sutterella (1) | | | | | | | | | | | +--Sutterella sp. CAG:351 (1) | | | | | | | | | +--Comamonadaceae (3) | | | | | | | | | +--Polaromonas sp. CG9_12 (1) | | | | | | | | | +--Comamonadaceae bacterium CG2_30_57_122 (1) | | | | | | | | | +--Polaromonas naphthalenivorans CJ2 (1) | | | | | | | +--Nitrosomonadales (2) | | | | | | | +--Nitrosomonadaceae (2) | | | | | | | +--Nitrosomonas (1) | | | | | | | | | +--Nitrosomonas cryotolerans ATCC 49181 (1) | | | | | | | +--Nitrosomonas sp. Is79A3 (1) | | | | | +--delta/epsilonsubdivisions (19) | | | | | +--Epsilonproteobacteria (18) | | | | | | | +--Campylobacterales (17) | | | | | | | | | +--Helicobacteraceae (13) | | | | | | | | | | | +--Helicobacter (3) | | | | | | | | | | | | | +--Helicobacter fennelliae MRY12-0050 (1) | | | | | | | | | | | | | +--Helicobacter macacae MIT 99-5501 (1) | | | | | | | | | | | | | +--Helicobacter bizzozeronii CCUG 35545 (1) | | | | | | | | | | | +--Helicobacter sp. MIT 11-5569 (1) | | | | | | | | | | | +--Sulfuricurvum sp. RIFOXYD2_FULL_44_160 (1) | | | | | | | | | | | +--Sulfuricurvum sp. MLSB (1) | | | | | | | | | | | +--Helicobacter saguini (1) | | | | | | | | | | | +--Helicobacter jaachi (1) | | | | | | | | | | | +--Helicobacter sp. MIT 05-5294 (2) | | | | | | | | | | | +--Candidatus Sulfuricurvum sp. RIFRC-1 (1) | | | | | | | | | | | +--Helicobacter ailurogastricus (1) | | | | | | | | | | | +--Helicobacter sp. MIT 05-5293 (1) | | | | | | | | | +--Campylobacteraceae (4) | | | | | | | | | +--Campylobacter (4) | | | | | | | | | +--Campylobacter coli RM4661 (1) | | | | | | | | | +--Campylobacter ureolyticus ACS-301-V-Sch3b (1) | | | | | | | | | +--Campylobacter cuniculorum DSM 23162 = LMG 24588 (1) | | | | | | | | | +--Campylobacter pinnipediorum subsp. caledonicus (1) | | | | | | | +--unclassifiedEpsilonproteobacteria (1) | | | | | | | +--Sulfurovum sp. AS07-7 (1) | | | | | +--Deltaproteobacteria (1) | | | | | +--Desulfobacterales (1) | | | | | +--Desulfobacteraceae (1) | | | | | +--Desulfobacteraceae bacterium 4572_130 (1) | | | +--Firmicutes (4) | | | +--Clostridia (4) | | | +--Thermoanaerobacterales (2) | | | | | +--ThermoanaerobacteralesFamilyIII.IncertaeSedis (2) | | | | | +--Caldicellulosiruptor bescii DSM 6725 (1) | | | | | +--Caldicellulosiruptor owensensis OL (1) | | | +--Clostridiales (2) | | | +--Peptococcaceae (1) | | | | | +--Desulfitobacterium metallireducens DSM 15288 (1) | | | +--Eubacteriaceae (1) | | | +--Acetobacterium wieringae (1) | +--Archaea (1) | +--TACKgroup (1) | +--Crenarchaeota (1) | +--Thermoprotei (1) | +--Acidilobales (1) | +--Caldisphaeraceae (1) | +--Caldisphaera (1) | +--Caldisphaera lagunensis DSM 15908 (1)