# Species tree for RF02033 # Generated from Rfam version 14.10 | +--Eukaryota (1) | | | +--Viridiplantae (1) | | | +--Streptophyta (1) | | | +--Embryophyta (1) | | | +--Tracheophyta (1) | | | +--Spermatophyta (1) | | | +--Magnoliophyta (1) | | | +--eudicotyledons (1) | | | +--coreeudicotyledons (1) | | | +--rosids (1) | | | +--malvids (1) | | | +--Malvales (1) | | | +--Malvaceae (1) | | | +--Grewioideae (1) | | | +--Corchorus olitorius (1) | +--Bacteria (923) | | | +--Actinobacteria (4) | | | | | +--Actinobacteridae (4) | | | | | +--Actinomycetales (4) | | | | | +--Streptosporangineae (4) | | | | | +--Streptosporangiaceae (4) | | | | | +--Streptosporangium subroseum (2) | | | | | +--Streptosporangium roseum DSM 43021 (2) | | | +--Proteobacteria (185) | | | | | +--Thiobacillus prosperus (1) | | | | | +--Gammaproteobacteria (124) | | | | | | | +--Alteromonadales (10) | | | | | | | | | +--Pseudoalteromonadaceae (2) | | | | | | | | | | | +--Pseudoalteromonas haloplanktis TAC125 (2) | | | | | | | | | +--Alteromonadaceae (8) | | | | | | | | | +--Marinobacter sp. ELB17 (8) | | | | | | | +--unclassifiedGammaproteobacteria (5) | | | | | | | | | +--Competibacteraceae (5) | | | | | | | | | +--CandidatusContendobacter (5) | | | | | | | | | +--Candidatus Contendobacter odensis Run_B_J11 (5) | | | | | | | +--Thiotrichales (73) | | | | | | | | | +--Thiotrichaceae (73) | | | | | | | | | +--Beggiatoa sp. IS2 (22) | | | | | | | | | +--Thiotrichaceae bacterium IS1 (1) | | | | | | | | | +--Thioploca ingrica (18) | | | | | | | | | +--Candidatus Thiomargarita nelsonii (21) | | | | | | | | | +--Thiothrix lacustris (2) | | | | | | | | | +--Beggiatoa sp. 4572_84 (9) | | | | | | | +--Chromatiales (24) | | | | | | | | | +--Ectothiorhodospiraceae (12) | | | | | | | | | | | +--Thiorhodospira sibirica ATCC 700588 (10) | | | | | | | | | | | +--Acidiferrobacter thiooxydans (2) | | | | | | | | | +--Chromatiaceae (12) | | | | | | | | | +--Thiorhodococcus drewsii AZ1 (1) | | | | | | | | | +--Thiorhodovibrio sp. 970 (1) | | | | | | | | | +--Allochromatium vinosum DSM 180 (9) | | | | | | | | | +--Nitrosococcus halophilus Nc4 (1) | | | | | | | +--Oceanospirillales (6) | | | | | | | | | +--Halomonadaceae (6) | | | | | | | | | +--Halomonas meridiana (3) | | | | | | | | | +--Halomonas sp. 54_146 (3) | | | | | | | +--Acidithiobacillales (6) | | | | | | | +--Acidithiobacillaceae (6) | | | | | | | +--Acidithiobacillus ferrooxidans ATCC 23270 (2) | | | | | | | +--Acidithiobacillus caldus SM-1 (1) | | | | | | | +--Acidithiobacillus sp. GGI-221 (2) | | | | | | | +--Acidithiobacillus caldus (1) | | | | | +--Betaproteobacteria (44) | | | | | | | +--Burkholderiales (43) | | | | | | | | | +--Burkholderiaceae (13) | | | | | | | | | | | +--Burkholderia (1) | | | | | | | | | | | | | +--Burkholderia ambifaria MEX-5 (1) | | | | | | | | | | | +--Burkholderia sp. ST111 (1) | | | | | | | | | | | +--Paraburkholderia ribeironis (1) | | | | | | | | | | | +--Caballeronia (1) | | | | | | | | | | | | | +--Caballeronia glathei PML1(12) (1) | | | | | | | | | | | +--Paraburkholderia piptadeniae (2) | | | | | | | | | | | +--Cupriavidus sp. USMAA2-4 (3) | | | | | | | | | | | +--Burkholderia glathei (1) | | | | | | | | | | | +--Caballeronia calidae (2) | | | | | | | | | | | +--Candidatus Burkholderia kirkii (1) | | | | | | | | | +--unclassifiedBurkholderiales (1) | | | | | | | | | | | +--Burkholderiales bacterium YL45 (1) | | | | | | | | | +--Comamonadaceae (18) | | | | | | | | | | | +--Variovorax sp. JS1663 (2) | | | | | | | | | | | +--Polaromonas sp. JS666 (6) | | | | | | | | | | | +--Polaromonas naphthalenivorans CJ2 (10) | | | | | | | | | +--Sutterellaceae (11) | | | | | | | | | +--Sutterella (8) | | | | | | | | | | | +--Sutterella wadsworthensis CAG:135 (1) | | | | | | | | | | | +--Sutterella wadsworthensis 2_1_59BFAA (7) | | | | | | | | | +--Parasutterella (3) | | | | | | | | | +--Parasutterella excrementihominis CAG:233 (3) | | | | | | | +--Rhodocyclales (1) | | | | | | | +--Rhodocyclaceae (1) | | | | | | | +--Petrobacter sp. JHK30 (1) | | | | | +--Deltaproteobacteria (7) | | | | | | | +--Desulfuromonadales (4) | | | | | | | | | +--Geobacteraceae (4) | | | | | | | | | +--Geoalkalibacter subterraneus (4) | | | | | | | +--Desulfobacterales (3) | | | | | | | +--Desulfobacteraceae (3) | | | | | | | +--Desulfobacter postgatei 2ac9 (3) | | | | | +--delta/epsilonsubdivisions (9) | | | | | +--Deltaproteobacteria (9) | | | | | +--CandidatusDesulfofervidaceae (1) | | | | | | | +--Candidatus Desulfofervidus auxilii (1) | | | | | +--Desulfovibrionales (1) | | | | | | | +--Desulfovibrionaceae (1) | | | | | | | +--Desulfovibrio sp. An276 (1) | | | | | +--Desulfobacterales (6) | | | | | | | +--Desulfobacteraceae (6) | | | | | | | +--Desulfotignum (1) | | | | | | | | | +--Desulfotignum phosphitoxidans DSM 13687 (1) | | | | | | | +--Desulfobacterium (4) | | | | | | | | | +--Desulfobacterium vacuolatum DSM 3385 (4) | | | | | | | +--Desulfobacteraceae bacterium 4572_88 (1) | | | | | +--unclassifiedDeltaproteobacteria (1) | | | | | +--Deltaproteobacteria bacterium GWB2_55_19 (1) | | | +--unclassifiedBacteria (2) | | | | | +--Bacteriacandidatephyla (2) | | | | | +--Patescibacteriagroup (1) | | | | | | | +--Microgenomatesgroup (1) | | | | | | | +--Candidatus Gottesmanbacteria bacterium GW2011_GWB1_49_7 (1) | | | | | +--candidate division WS6 bacterium 34_10 (1) | | | +--Chloroflexi (67) | | | | | +--Ktedonobacteria (58) | | | | | | | +--Ktedonobacterales (58) | | | | | | | +--Ktedonobacteraceae (58) | | | | | | | +--Ktedonobacter racemifer DSM 44963 (58) | | | | | +--Kouleothrix aurantiaca (9) | | | +--Firmicutes (57) | | | | | +--Clostridia (35) | | | | | | | +--Thermoanaerobacterales (9) | | | | | | | | | +--ThermoanaerobacteralesFamilyIV.IncertaeSedis (3) | | | | | | | | | | | +--Mahella australiensis 50-1 BON (3) | | | | | | | | | +--Thermoanaerobacteraceae (6) | | | | | | | | | +--Moorellagroup (2) | | | | | | | | | | | +--Ammonifex degensii KC4 (2) | | | | | | | | | +--Fervidicola ferrireducens (4) | | | | | | | +--Halanaerobiales (2) | | | | | | | | | +--Halobacteroidaceae (2) | | | | | | | | | +--Acetohalobium arabaticum DSM 5501 (2) | | | | | | | +--Natranaerobiales (2) | | | | | | | | | +--Natranaerobiaceae (2) | | | | | | | | | +--Natranaerobius thermophilus JW/NM-WN-LF (2) | | | | | | | +--Clostridiales (22) | | | | | | | +--Lachnospiraceae (1) | | | | | | | | | +--Butyrivibrio proteoclasticus B316 (1) | | | | | | | +--ClostridialesFamilyXI.IncertaeSedis (2) | | | | | | | | | +--Finegoldia magna ATCC 29328 (2) | | | | | | | +--ClostridialesFamilyXVII.IncertaeSedis (1) | | | | | | | | | +--Sulfobacillus thermosulfidooxidans (1) | | | | | | | +--Peptococcaceae (4) | | | | | | | | | +--Desulfitobacterium (3) | | | | | | | | | | | +--Desulfitobacterium sp. enrichment culture clone CEB3 (3) | | | | | | | | | +--Desulfosporosinus sp. OT (1) | | | | | | | +--Clostridiaceae (11) | | | | | | | | | +--Clostridium difficile QCD-76w55 (1) | | | | | | | | | +--Clostridium sp. 232.1 (7) | | | | | | | | | +--Clostridium botulinum A3 str. Loch Maree (1) | | | | | | | | | +--Clostridium formicaceticum (1) | | | | | | | | | +--Clostridium difficile QCD-63q42 (1) | | | | | | | +--Eubacteriaceae (3) | | | | | | | +--Eubacterium cellulosolvens 6 (1) | | | | | | | +--Eubacterium ruminantium (2) | | | | | +--Lactobacillales (3) | | | | | | | +--Lactobacillaceae (3) | | | | | | | +--Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 (1) | | | | | | | +--Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 (2) | | | | | +--Bacillales (19) | | | | | +--BacillalesFamilyXII.IncertaeSedis (2) | | | | | | | +--Exiguobacterium sibiricum 255-15 (2) | | | | | +--Paenibacillaceae (3) | | | | | | | +--Paenibacillus polymyxa SC2 (1) | | | | | | | +--Paenibacillus sp. HGF7 (1) | | | | | | | +--Paenibacillus wynnii (1) | | | | | +--Alicyclobacillaceae (2) | | | | | | | +--Alicyclobacillus macrosporangiidus (1) | | | | | | | +--Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 (1) | | | | | +--Bacillaceae (12) | | | | | +--Anoxybacillus flavithermus (1) | | | | | +--Anoxybacillus amylolyticus (2) | | | | | +--Virgibacillus pantothenticus (2) | | | | | +--Caldalkalibacillus thermarum TA2.A1 (1) | | | | | +--Bacillus aminovorans (1) | | | | | +--Bacillus selenitireducens MLS10 (5) | | | +--Cyanobacteria (285) | | | | | +--Oscillatoriales (183) | | | | | | | +--Lyngbya majuscula 3L (21) | | | | | | | +--Phormidium ambiguum IAM M-71 (1) | | | | | | | +--Oscillatoria acuminata PCC 6304 (2) | | | | | | | +--Oscillatoria sp. PCC 7112 (7) | | | | | | | +--Oscillatoria sp. PCC 6506 (9) | | | | | | | +--Oscillatoria sp. PCC 8927 (38) | | | | | | | +--Planktothrix sp. PCC 9214 (7) | | | | | | | +--Arthrospira (37) | | | | | | | | | +--Arthrospira maxima CS-328 (37) | | | | | | | +--Microcoleus chthonoplastes PCC 7420 (32) | | | | | | | +--Lyngbya sp. PCC 8106 (24) | | | | | | | +--Planktothrix agardhii NIVA-CYA 126/8 (2) | | | | | | | +--Leptolyngbya valderiana BDU 20041 (3) | | | | | +--Stigonematales (3) | | | | | | | +--Mastigocoleus testarum BC008 (3) | | | | | +--Nostocales (76) | | | | | | | +--Nostocaceae (60) | | | | | | | | | +--Nodularia spumigena CCY9414 (24) | | | | | | | | | +--'Nostoc azollae' 0708 (1) | | | | | | | | | +--Anabaena sp. 90 (28) | | | | | | | | | +--Anabaena variabilis ATCC 29413 (2) | | | | | | | | | +--Cylindrospermum stagnale PCC 7417 (2) | | | | | | | | | +--Nostoc sp. PCC 7120 (2) | | | | | | | | | +--Anabaena cylindrica PCC 7122 (1) | | | | | | | +--Microchaetaceae (1) | | | | | | | | | +--Tolypothrix sp. PCC 7601 = UTEX LB 481 (1) | | | | | | | +--Scytonemataceae (15) | | | | | | | +--Scytonema hofmanni PCC 7110 (15) | | | | | +--Pleurocapsales (5) | | | | | | | +--Chroococcidiopsis thermalis PCC 7203 (4) | | | | | | | +--Xenococcus sp. PCC 7305 (1) | | | | | +--Chroococcales (18) | | | | | +--Halothececluster (5) | | | | | | | +--Halothece sp. PCC 7418 (5) | | | | | +--Cyanothece sp. CCY0110 (1) | | | | | +--Cyanothece sp. PCC 7822 (5) | | | | | +--Synechococcus sp. PCC 6312 (1) | | | | | +--Cyanothece sp. PCC 7424 (2) | | | | | +--Cyanothece sp. ATCC 51142 (2) | | | | | +--Crocosphaera watsonii WH 8501 (2) | | | +--Thermotogae (33) | | | | | +--Thermotogales (33) | | | | | +--Thermotogaceae (33) | | | | | +--Thermotogaceae bacterium SulfLac1 (15) | | | | | +--Petrotoga mobilis SJ95 (3) | | | | | +--Thermosipho africanus TCF52B (1) | | | | | +--Thermotoga lettingae TMO (14) | | | +--Acidobacteria (2) | | | | | +--Acidobacteriales (1) | | | | | | | +--Acidobacteriaceae bacterium K22 (1) | | | | | +--Candidatus Chloracidobacterium thermophilum B (1) | | | +--Deinococcus-Thermus (2) | | | | | +--Deinococci (2) | | | | | +--Thermales (2) | | | | | +--Thermaceae (2) | | | | | +--Meiothermus silvanus DSM 9946 (1) | | | | | +--Meiothermus ruber DSM 1279 (1) | | | +--Verrucomicrobia (10) | | | | | +--unclassifiedVerrucomicrobia (10) | | | | | +--Methylacidiphilales (10) | | | | | +--Methylacidiphilaceae (10) | | | | | +--Methylacidiphilum infernorum V4 (10) | | | +--PVCgroup (6) | | | | | +--Chlamydiae (5) | | | | | | | +--Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9 (2) | | | | | | | +--Chlamydiae bacterium RIFCSPLOWO2_01_FULL_28_7 (2) | | | | | | | +--Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_27_8 (1) | | | | | +--Verrucomicrobia (1) | | | | | +--Methylacidiphilae (1) | | | | | +--Methylacidiphilales (1) | | | | | +--Methylacidiphilaceae (1) | | | | | +--Methylacidiphilum (1) | | | | | +--Methylacidiphilum fumariolicum SolV (1) | | | +--Terrabacteriagroup (255) | | | | | +--Tenericutes (1) | | | | | | | +--Candidatus Izimaplasma sp. HR2 (1) | | | | | +--Cyanobacteria/Melainabacteriagroup (142) | | | | | | | +--Cyanobacteria (142) | | | | | | | +--unclassifiedCyanobacteria (1) | | | | | | | | | +--Cyanobacteria bacterium 13_1_40CM_2_61_4 (1) | | | | | | | +--Nostocales (116) | | | | | | | | | +--Hapalosiphonaceae (5) | | | | | | | | | | | +--Mastigocladus (5) | | | | | | | | | | | +--Mastigocladus laminosus UU774 (5) | | | | | | | | | +--Nostocaceae (7) | | | | | | | | | | | +--Nostoc (1) | | | | | | | | | | | | | +--Nostoc calcicola FACHB-389 (1) | | | | | | | | | | | +--Anabaena sp. CRKS33 (6) | | | | | | | | | +--Aphanizomenonaceae (61) | | | | | | | | | | | +--Aphanizomenon (61) | | | | | | | | | | | +--Aphanizomenon flos-aquae 2012/KM1/D3 (60) | | | | | | | | | | | +--Aphanizomenon flos-aquae LD13 (1) | | | | | | | | | +--Rivulariaceae (3) | | | | | | | | | | | +--Calothrix sp. HK-06 (1) | | | | | | | | | | | +--Calothrix (2) | | | | | | | | | | | +--Calothrix sp. PCC 6303 (2) | | | | | | | | | +--Tolypothrichaceae (13) | | | | | | | | | | | +--Hassallia (1) | | | | | | | | | | | | | +--Hassallia byssoidea VB512170 (1) | | | | | | | | | | | +--Tolypothrix (12) | | | | | | | | | | | +--Tolypothrix campylonemoides VB511288 (6) | | | | | | | | | | | +--Tolypothrix bouteillei VB521301 (6) | | | | | | | | | +--Scytonemataceae (27) | | | | | | | | | +--Scytonema (27) | | | | | | | | | +--Scytonema millei VB511283 (21) | | | | | | | | | +--Scytonema tolypothrichoides VB-61278 (6) | | | | | | | +--Oscillatoriophycideae (25) | | | | | | | +--Oscillatoriales (25) | | | | | | | +--Oscillatoriaceae (12) | | | | | | | | | +--Phormidium sp. OSCR (1) | | | | | | | | | +--Limnoraphis (11) | | | | | | | | | +--Limnoraphis robusta CS-951 (11) | | | | | | | +--Coleofasciculaceae (1) | | | | | | | | | +--Roseofilum (1) | | | | | | | | | +--Roseofilum reptotaenium AO1-A (1) | | | | | | | +--Gomontiellaceae (4) | | | | | | | | | +--Crinalium (4) | | | | | | | | | +--Crinalium epipsammum PCC 9333 (4) | | | | | | | +--Microcoleaceae (8) | | | | | | | +--Arthrospira (8) | | | | | | | +--Arthrospira platensis NIES-39 (8) | | | | | +--Firmicutes (46) | | | | | | | +--Clostridia (25) | | | | | | | | | +--Thermoanaerobacterales (2) | | | | | | | | | | | +--Thermoanaerobacteraceae (2) | | | | | | | | | | | +--Caldanaerobius (2) | | | | | | | | | | | +--Caldanaerobius fijiensis DSM 17918 (2) | | | | | | | | | +--unclassifiedClostridia (2) | | | | | | | | | | | +--Clostridia bacterium 41_269 (2) | | | | | | | | | +--Clostridiales (21) | | | | | | | | | +--Lachnospiraceae (1) | | | | | | | | | | | +--Butyrivibrio (1) | | | | | | | | | | | +--Butyrivibrio fibrisolvens DSM 3071 (1) | | | | | | | | | +--unclassifiedClostridiales (9) | | | | | | | | | | | +--Epulopiscium sp. Nele67-Bin004 (2) | | | | | | | | | | | +--Epulopiscium sp. AS2M-Bin002 (2) | | | | | | | | | | | +--Clostridiales bacterium 41_12_two_minus (2) | | | | | | | | | | | +--Epulopiscium sp. Nuni2H_MBin001 (3) | | | | | | | | | +--Peptococcaceae (5) | | | | | | | | | | | +--Desulfotomaculum (2) | | | | | | | | | | | | | +--Desulfotomaculum putei DSM 12395 (1) | | | | | | | | | | | | | +--Desulfotomaculum australicum DSM 11792 (1) | | | | | | | | | | | +--Peptococcaceae bacterium BRH_c23 (3) | | | | | | | | | +--Clostridiaceae (6) | | | | | | | | | +--Clostridium (5) | | | | | | | | | | | +--Clostridium magnum DSM 2767 (3) | | | | | | | | | | | +--Clostridium sp. CAG:678 (2) | | | | | | | | | +--Paramaledivibacter (1) | | | | | | | | | +--Paramaledivibacter caminithermalis DSM 15212 (1) | | | | | | | +--Bacilli (14) | | | | | | | | | +--Lactobacillales (12) | | | | | | | | | | | +--Enterococcaceae (2) | | | | | | | | | | | | | +--Enterococcus (2) | | | | | | | | | | | | | +--Enterococcus cecorum DSM 20682 = ATCC 43198 (2) | | | | | | | | | | | +--Lactobacillaceae (10) | | | | | | | | | | | +--Lactobacillus (10) | | | | | | | | | | | +--Lactobacillus harbinensis DSM 16991 (1) | | | | | | | | | | | +--Lactobacillus equi DPC 6820 (2) | | | | | | | | | | | +--Lactobacillus composti DSM 18527 = JCM 14202 (7) | | | | | | | | | +--Bacillales (2) | | | | | | | | | +--Bacillaceae (2) | | | | | | | | | +--Lysinibacillus contaminans (1) | | | | | | | | | +--Anoxybacillus sp. BCO1 (1) | | | | | | | +--Firmicutes bacterium CAG:424 (1) | | | | | | | +--Firmicutes bacterium CAG:227 (1) | | | | | | | +--unclassifiedFirmicutessensustricto (5) | | | | | | | +--Firmicutes bacterium M10-2 (5) | | | | | +--Chloroflexi (66) | | | | | +--unclassifiedChloroflexi (7) | | | | | | | +--Chloroflexi bacterium 13_1_20CM_54_36 (7) | | | | | +--Ktedonobacteria (49) | | | | | | | +--Ktedonobacterales (49) | | | | | | | +--Ktedonobacteraceae (49) | | | | | | | +--Ktedonobacter sp. 13_1_40CM_4_52_4 (2) | | | | | | | +--Ktedonobacter sp. 13_2_20CM_2_54_8 (7) | | | | | | | +--Ktedonobacter sp. 13_1_20CM_3_54_15 (8) | | | | | | | +--Ktedonobacter sp. 13_2_20CM_53_11 (13) | | | | | | | +--Ktedonobacter sp. 13_1_20CM_4_53_7 (5) | | | | | | | +--Ktedonobacter sp. 13_2_20CM_2_56_8 (8) | | | | | | | +--Ktedonobacter sp. 13_1_20CM_4_53_11 (6) | | | | | +--Anaerolineae (10) | | | | | +--Anaerolineales (10) | | | | | +--Anaerolineaceae (10) | | | | | +--Anaerolineaceae bacterium 4572_78 (10) | | | +--Nitrospirae (15) | | | +--Nitrospirales (12) | | | | | +--Nitrospiraceae (12) | | | | | +--Leptospirillum ferrodiazotrophum (12) | | | +--Nitrospira (3) | | | +--Nitrospirales (3) | | | +--Nitrospiraceae (3) | | | +--Leptospirillum (3) | | | +--Leptospirillum sp. Group IV 'UBA BS' (3) | +--Viruses (2) | | | +--dsDNAviruses,noRNAstage (2) | | | +--Caudovirales (2) | | | +--Clostridium phage c-st (2) | +--Archaea (38) | | | +--DPANNgroup (1) | | | | | +--Candidatus Woesearchaeota archaeon CG1_02_33_12 (1) | | | +--TACKgroup (1) | | | | | +--CandidatusBathyarchaeota (1) | | | | | +--Candidatus Bathyarchaeota archaeon BA1 (1) | | | +--Euryarchaeota (36) | | | +--Methanomicrobia (19) | | | | | +--Methanosarcinales (19) | | | | | +--Methanosarcinaceae (17) | | | | | | | +--Methanosarcina sp. MTP4 (3) | | | | | | | +--Methanohalobium evestigatum Z-7303 (7) | | | | | | | +--Methanosarcina mazei Go1 (2) | | | | | | | +--Methanosarcina sp. Ant1 (5) | | | | | +--CandidatusMethanoperedenaceae (2) | | | | | +--Candidatus Methanoperedens sp. BLZ1 (2) | | | +--unclassifiedEuryarchaeota (2) | | | | | +--CandidatusAltiarchaeales (2) | | | | | +--Candidatus Altiarchaeum sp. CG2_30_32_3053 (1) | | | | | +--Candidatus Altiarchaeales archaeon A3 (1) | | | +--Thermoplasmata (15) | | | +--Thermoplasmatales (15) | | | +--Ferroplasmaceae (15) | | | +--Ferroplasma (15) | | | +--Ferroplasma sp. Type II (15) | +--unclassified sequences (18)