# Species tree for RF01989 # Generated from Rfam version 14.10 | +--Eukaryota (6) | | | +--Alveolata (1) | | | | | +--Apicomplexa (1) | | | | | +--Coccidia (1) | | | | | +--Eucoccidiorida (1) | | | | | +--Eimeriorina (1) | | | | | +--Sarcocystidae (1) | | | | | +--Hammondia hammondi (1) | | | +--Metazoa (1) | | | | | +--Platyhelminthes (1) | | | | | +--Trematoda (1) | | | | | +--Digenea (1) | | | | | +--Opisthorchiida (1) | | | | | +--Opisthorchiata (1) | | | | | +--Opisthorchiidae (1) | | | | | +--Clonorchis sinensis (1) | | | +--Viridiplantae (2) | | | | | +--Streptophyta (2) | | | | | +--Embryophyta (2) | | | | | +--Tracheophyta (2) | | | | | +--Spermatophyta (2) | | | | | +--Magnoliophyta (2) | | | | | +--Liliopsida (2) | | | | | +--Poales (2) | | | | | +--Poaceae (2) | | | | | +--BEPclade (2) | | | | | +--Pooideae (1) | | | | | | | +--Triticeae (1) | | | | | | | +--Triticum urartu (1) | | | | | +--Ehrhartoideae (1) | | | | | +--Oryzeae (1) | | | | | +--Oryza sativa Indica Group (1) | | | +--Opisthokonta (2) | | | +--Fungi (2) | | | +--Dikarya (2) | | | +--Ascomycota (2) | | | +--saccharomyceta (2) | | | +--Pezizomycotina (2) | | | +--leotiomyceta (2) | | | +--sordariomyceta (2) | | | +--Sordariomycetes (2) | | | +--Hypocreomycetidae (2) | | | +--Hypocreales (2) | | | +--Cordycipitaceae (2) | | | +--Beauveria (2) | | | +--Beauveria bassiana D1-5 (2) | +--unclassifiedsequences (2) | | | +--metagenomes (2) | | | +--freshwater sediment metagenome (1) | | | +--marine metagenome (1) | +--Bacteria (470) | +--Actinobacteria (4) | | | +--Coriobacteridae (4) | | | +--Coriobacteriales (4) | | | +--Coriobacterineae (4) | | | +--Coriobacteriaceae (4) | | | +--Slackia heliotrinireducens DSM 20476 (1) | | | +--Eggerthella lenta DSM 2243 (2) | | | +--Gordonibacter pamelaeae 7-10-1-b (1) | +--unclassifiedBacteria (1) | | | +--bacteria symbiont BFo1 of Frankliniella occidentalis (1) | +--Proteobacteria (434) | | | +--Alphaproteobacteria (75) | | | | | +--Rhizobiales bacterium WSM3557 (1) | | | | | +--Polymorphum gilvum SL003B-26A1 (1) | | | | | +--Rhizobiales (48) | | | | | | | +--Bartonellaceae (2) | | | | | | | | | +--Bartonella apis (1) | | | | | | | | | +--Bartonella (1) | | | | | | | | | +--Bartonella tamiae Th239 (1) | | | | | | | +--Brucellaceae (4) | | | | | | | | | +--Ochrobactrum (1) | | | | | | | | | | | +--Ochrobactrum intermedium 229E (1) | | | | | | | | | +--Ochrobactrum sp. P6BS-III (1) | | | | | | | | | +--Ochrobactrum anthropi ATCC 49188 (2) | | | | | | | +--Aurantimonadaceae (2) | | | | | | | | | +--Aurantimonas altamirensis (1) | | | | | | | | | +--Aurantimonas sp. USBA 369 (1) | | | | | | | +--Phyllobacteriaceae (5) | | | | | | | | | +--Paramesorhizobium deserti (1) | | | | | | | | | +--Mesorhizobium sp. LC103 (1) | | | | | | | | | +--Mesorhizobium loti (1) | | | | | | | | | +--Mesorhizobium sp. ORS3428 (1) | | | | | | | | | +--Mesorhizobium sp. LNHC252B00 (1) | | | | | | | +--unclassifiedRhizobiales (5) | | | | | | | | | +--Rhizobiales bacterium 65-9 (1) | | | | | | | | | +--Rhizobiales bacterium 62-47 (1) | | | | | | | | | +--Rhizobiales bacterium 63-22 (1) | | | | | | | | | +--Rhizobiales bacterium 64-17 (1) | | | | | | | | | +--Rhizobiales bacterium 62-17 (1) | | | | | | | +--Hyphomicrobiaceae (4) | | | | | | | | | +--Hyphomicrobium sp. MC1 (1) | | | | | | | | | +--Hyphomicrobium sp. SCN 65-11 (2) | | | | | | | | | +--Hyphomicrobium denitrificans 1NES1 (1) | | | | | | | +--Rhizobiaceae (10) | | | | | | | | | +--Shinella sp. 65-6 (1) | | | | | | | | | +--Shinella sp. DD12 (1) | | | | | | | | | +--Kaistia sp. SCN 65-12 (1) | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (2) | | | | | | | | | | | +--Rhizobium sp. Root1212 (1) | | | | | | | | | | | +--Rhizobium sp. YS-1r (1) | | | | | | | | | +--Sinorhizobium/Ensifergroup (5) | | | | | | | | | +--Ensifer (1) | | | | | | | | | | | +--Ensifer adhaerens OV14 (1) | | | | | | | | | +--Ensifer sp. LCM 4579 (1) | | | | | | | | | +--Sinorhizobium meliloti 1021 (2) | | | | | | | | | +--Ensifer sp. YIC4027 (1) | | | | | | | +--Xanthobacteraceae (5) | | | | | | | | | +--Starkeya novella DSM 506 (1) | | | | | | | | | +--Xanthobacter autotrophicus Py2 (1) | | | | | | | | | +--Pseudolabrys sp. Root1462 (1) | | | | | | | | | +--Azorhizobium caulinodans ORS 571 (2) | | | | | | | +--Methylobacteriaceae (2) | | | | | | | | | +--Methylobacterium radiotolerans JCM 2831 (1) | | | | | | | | | +--Methylobacterium sp. Leaf456 (1) | | | | | | | +--Bradyrhizobiaceae (7) | | | | | | | | | +--Bosea sp. LC85 (1) | | | | | | | | | +--Bosea thiooxidans (1) | | | | | | | | | +--Afipia sp. 64-13 (1) | | | | | | | | | +--Bosea sp. 67-29 (1) | | | | | | | | | +--Oligotropha carboxidovorans OM5 (3) | | | | | | | +--Beijerinckiaceae (2) | | | | | | | +--Methylocella silvestris BL2 (2) | | | | | +--Rhodospirillales (6) | | | | | | | +--Acetobacteraceae (3) | | | | | | | | | +--Roseomonas deserti (1) | | | | | | | | | +--Roseomonas rosea (1) | | | | | | | | | +--Roseomonas mucosa (1) | | | | | | | +--Rhodospirillaceae (3) | | | | | | | +--Azospirillum amazonense Y2 (1) | | | | | | | +--Magnetospirillum moscoviense (1) | | | | | | | +--Inquilinus (1) | | | | | | | +--Inquilinus limosus MP06 (1) | | | | | +--unclassifiedAlphaproteobacteria (4) | | | | | | | +--Alphaproteobacteria bacterium 64-6 (2) | | | | | | | +--Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 (1) | | | | | | | +--Alphaproteobacteria bacterium 65-37 (1) | | | | | +--Rhodobacterales (15) | | | | | +--Rhodobacteraceae (15) | | | | | +--Paracoccus yeei (1) | | | | | +--Paracoccus aminovorans (1) | | | | | +--Paracoccus (1) | | | | | | | +--Paracoccus aminophilus JCM 7686 (1) | | | | | +--Rhodovulum sp. PH10 (1) | | | | | +--Paracoccus sp. SM22M-07 (1) | | | | | +--Paracoccus denitrificans PD1222 (1) | | | | | +--Paracoccus solventivorans (1) | | | | | +--Paracoccus contaminans (1) | | | | | +--Haematobacter massiliensis (1) | | | | | +--Paracoccus sanguinis (1) | | | | | +--Paracoccus sp. 228 (1) | | | | | +--Roseovarius (1) | | | | | | | +--Roseovarius mucosus DSM 17069 (1) | | | | | +--Paracoccus sediminis (1) | | | | | +--Paracoccus sp. J56 (1) | | | | | +--Paracoccus sp. Zy-3 (1) | | | +--Gammaproteobacteria (224) | | | | | +--unclassifiedGammaproteobacteria (3) | | | | | | | +--Gammaproteobacteria bacterium MFB021 (1) | | | | | | | +--Competibacteraceae (1) | | | | | | | | | +--CandidatusCompetibacter (1) | | | | | | | | | +--Candidatus Competibacter denitrificans Run_A_D11 (1) | | | | | | | +--Wohlfahrtiimonas (1) | | | | | | | +--Wohlfahrtiimonas chitiniclastica SH04 (1) | | | | | +--Enterobacterales (56) | | | | | | | +--Yersiniaceae (4) | | | | | | | | | +--Serratia (2) | | | | | | | | | | | +--Serratiamarcescens (1) | | | | | | | | | | | | | +--Serratia marcescens subsp. marcescens Db11 (1) | | | | | | | | | | | +--Serratia marcescens FGI94 (1) | | | | | | | | | +--Serratia sp. DD3 (1) | | | | | | | | | +--Chania (1) | | | | | | | | | +--Chania multitudinisentens RB-25 (1) | | | | | | | +--Morganellaceae (11) | | | | | | | | | +--Moellerella (2) | | | | | | | | | | | +--Moellerella wisconsensis ATCC 35017 (2) | | | | | | | | | +--Xenorhabdus (2) | | | | | | | | | | | +--Xenorhabdus poinarii G6 (1) | | | | | | | | | | | +--Xenorhabdus szentirmaii DSM 16338 (1) | | | | | | | | | +--Morganella (2) | | | | | | | | | | | +--Morganellamorganii (2) | | | | | | | | | | | +--Morganella morganii subsp. morganii KT (2) | | | | | | | | | +--Providencia (5) | | | | | | | | | +--Providencia rettgeri Dmel1 (2) | | | | | | | | | +--Providencia burhodogranariea DSM 19968 (2) | | | | | | | | | +--Providencia sneebia DSM 19967 (1) | | | | | | | +--Enterobacteriaceae (37) | | | | | | | | | +--Cedecea (2) | | | | | | | | | | | +--Cedecea davisae DSM 4568 (2) | | | | | | | | | +--Kluyvera (2) | | | | | | | | | | | +--Kluyvera ascorbata ATCC 33433 (2) | | | | | | | | | +--Salmonella (5) | | | | | | | | | | | +--Salmonellaenterica (5) | | | | | | | | | | | +--Salmonellaentericasubsp.enterica (5) | | | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 (2) | | | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Enteritidis str. LA5 (2) | | | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Newport str. S09097 (1) | | | | | | | | | +--Yokenella (2) | | | | | | | | | | | +--Yokenella regensburgei ATCC 43003 (2) | | | | | | | | | +--Trabulsiella (2) | | | | | | | | | | | +--Trabulsiella guamensis ATCC 49490 (2) | | | | | | | | | +--Mangrovibacter sp. MFB070 (1) | | | | | | | | | +--Escherichia (3) | | | | | | | | | | | +--Escherichia vulneris NBRC 102420 (1) | | | | | | | | | | | +--Escherichia coli ISC11 (2) | | | | | | | | | +--Klebsiella sp. RIT-PI-d (2) | | | | | | | | | +--Enterobacter (2) | | | | | | | | | | | +--Enterobactercloacaecomplex (2) | | | | | | | | | | | +--Enterobacter cloacae S611 (2) | | | | | | | | | +--Klebsiella (10) | | | | | | | | | | | +--Klebsiella pneumoniae IS43 (2) | | | | | | | | | | | +--Klebsiella pneumoniae IS46 (2) | | | | | | | | | | | +--Klebsiella pneumoniae IS39 (2) | | | | | | | | | | | +--Klebsiellapneumoniae (2) | | | | | | | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae DSM 30104 (2) | | | | | | | | | | | +--Klebsiella pneumoniae ISC21 (2) | | | | | | | | | +--Buttiauxella (2) | | | | | | | | | | | +--Buttiauxella agrestis ATCC 33320 (2) | | | | | | | | | +--[Kluyvera] intestini (2) | | | | | | | | | +--Atlantibacter (2) | | | | | | | | | +--Atlantibacter hermannii NBRC 105704 (2) | | | | | | | +--unclassifiedEnterobacterales (1) | | | | | | | | | +--Plesiomonas (1) | | | | | | | | | +--Plesiomonas shigelloides 302-73 (1) | | | | | | | +--Budviciaceae (1) | | | | | | | | | +--Leminorella (1) | | | | | | | | | +--Leminorella grimontii ATCC 33999 = DSM 5078 (1) | | | | | | | +--Hafniaceae (2) | | | | | | | +--Hafnia (2) | | | | | | | +--Hafnia alvei FB1 (2) | | | | | +--Pasteurellales (31) | | | | | | | +--Haemophilus felis (1) | | | | | | | +--Pasteurellaceae (30) | | | | | | | +--Actinobacillus minor 202 (1) | | | | | | | +--Pasteurella multocida subsp. multocida str. Pm70 (1) | | | | | | | +--Mannheimia succiniciproducens MBEL55E (1) | | | | | | | +--Gallibacterium anatis UMN179 (1) | | | | | | | +--Actinobacillus pleuropneumoniae serovar 5b str. L20 (1) | | | | | | | +--Haemophilus parasuis SH0165 (1) | | | | | | | +--Avibacterium (1) | | | | | | | | | +--Avibacterium paragallinarum JF4211 (1) | | | | | | | +--Aggregatibacter actinomycetemcomitans D11S-1 (1) | | | | | | | +--Pasteurella (2) | | | | | | | | | +--Pasteurella bettyae CCUG 2042 (1) | | | | | | | | | +--Pasteurellamultocida (1) | | | | | | | | | +--Pasteurella multocida subsp. multocida str. Anand1_buffalo (1) | | | | | | | +--Actinobacillus muris (1) | | | | | | | +--Haemophilus sp. HK 2154 (1) | | | | | | | +--Rodentibacter rarus (1) | | | | | | | +--Bibersteinia (1) | | | | | | | | | +--Bibersteinia trehalosi USDA-ARS-USMARC-192 (1) | | | | | | | +--Haemophilus influenzae Rd KW20 (1) | | | | | | | +--Haemophilus (1) | | | | | | | | | +--Haemophilus parahaemolyticus HK385 (1) | | | | | | | +--Haemophilus paracuniculus (1) | | | | | | | +--Actinobacillus pleuropneumoniae serovar 3 str. JL03 (1) | | | | | | | +--Gallibacterium salpingitidis (1) | | | | | | | +--Rodentibacter heylii (1) | | | | | | | +--Chelonobacter oris (1) | | | | | | | +--Avibacterium paragallinarum (1) | | | | | | | +--Haemophilus pittmaniae HK 85 (1) | | | | | | | +--Rodentibacter myodis (1) | | | | | | | +--unclassifiedPasteurellaceae (2) | | | | | | | | | +--Pasteurellaceae bacterium 15-036681 (1) | | | | | | | | | +--Pasteurellaceae bacterium NI1060 (1) | | | | | | | +--Actinobacillus succinogenes 130Z (1) | | | | | | | +--Mannheimia (1) | | | | | | | | | +--Mannheimia haemolytica M42548 (1) | | | | | | | +--Actinobacillus minor NM305 (1) | | | | | | | +--Rodentibacter heidelbergensis (1) | | | | | +--Alteromonadales (6) | | | | | | | +--Shewanellaceae (6) | | | | | | | +--Shewanella oneidensis MR-1 (2) | | | | | | | +--Shewanella pealeana ATCC 700345 (1) | | | | | | | +--Shewanella mangrovi (1) | | | | | | | +--Shewanella baltica OS195 (1) | | | | | | | +--Shewanella algae (1) | | | | | +--Vibrionales (6) | | | | | | | +--Vibrionaceae (6) | | | | | | | +--Photobacterium marinum (1) | | | | | | | +--Photobacterium (1) | | | | | | | | | +--Photobacteriumdamselae (1) | | | | | | | | | +--Photobacterium damselae subsp. piscicida DI21 (1) | | | | | | | +--Photobacterium iliopiscarium (1) | | | | | | | +--Photobacterium angustum S14 (2) | | | | | | | +--Photobacterium damselae subsp. damselae CIP 102761 (1) | | | | | +--Xanthomonadales (7) | | | | | | | +--Rhodanobacteraceae (3) | | | | | | | | | +--Dyella jiangningensis (1) | | | | | | | | | +--Luteibacter (1) | | | | | | | | | | | +--Luteibacter rhizovicinus DSM 16549 (1) | | | | | | | | | +--Dokdonella (1) | | | | | | | | | +--Dokdonella koreensis DS-123 (1) | | | | | | | +--Xanthomonadaceae (4) | | | | | | | +--Stenotrophomonas (1) | | | | | | | | | +--Stenotrophomonasmaltophiliagroup (1) | | | | | | | | | +--Stenotrophomonas maltophilia SKK35 (1) | | | | | | | +--unclassifiedXanthomonadaceae (1) | | | | | | | | | +--Xanthomonadaceae bacterium SCN 69-320 (1) | | | | | | | +--Luteibacter yeojuensis (1) | | | | | | | +--Luteimonas sp. JM171 (1) | | | | | +--Thiotrichales (1) | | | | | | | +--Thiotrichaceae (1) | | | | | | | +--Thiothrix eikelboomii (1) | | | | | +--Enterobacteriales (64) | | | | | | | +--Enterobacteriaceae (64) | | | | | | | +--Serratia fonticola (2) | | | | | | | +--Pantoea gaviniae (1) | | | | | | | +--Leclercia adecarboxylata (2) | | | | | | | +--Kluyvera intermedia (2) | | | | | | | +--Xenorhabdus vietnamensis (1) | | | | | | | +--Escherichia coli str. K-12 substr. MG1655 (1) | | | | | | | +--Enterobacter aerogenes KCTC 2190 (2) | | | | | | | +--Proteus penneri ATCC 35198 (1) | | | | | | | +--Salmonella (2) | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (2) | | | | | | | +--Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- (2) | | | | | | | +--Raoultella ornithinolytica (2) | | | | | | | +--Escherichia coli K-12 (2) | | | | | | | +--Xenorhabdus doucetiae (1) | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (2) | | | | | | | +--Shigella dysenteriae Sd197 (2) | | | | | | | +--Xenorhabdus sp. SF87 (1) | | | | | | | +--Yersinia ruckeri (1) | | | | | | | +--Serratia odorifera DSM 4582 (1) | | | | | | | +--Serratia proteamaculans 568 (1) | | | | | | | +--Enterobacter gergoviae (2) | | | | | | | +--Enterobacter sp. 638 (2) | | | | | | | +--Edwardsiella ictaluri 93-146 (1) | | | | | | | +--Raoultella planticola (2) | | | | | | | +--Pantoea dispersa (1) | | | | | | | +--Photorhabdus luminescens subsp. laumondii TTO1 (1) | | | | | | | +--Enterobacter (2) | | | | | | | | | +--Enterobacter cloacae SCF1 (2) | | | | | | | +--Citrobacter koseri ATCC BAA-895 (2) | | | | | | | +--Pantoea sp. At-9b (1) | | | | | | | +--Yersinia pestis CO92 (1) | | | | | | | +--Erwinia billingiae (1) | | | | | | | +--Yersinia mollaretii ATCC 43969 (1) | | | | | | | +--Pragia fontium (2) | | | | | | | +--Cronobacter sakazakii ATCC BAA-894 (1) | | | | | | | +--Citrobacter rodentium ICC168 (2) | | | | | | | +--Providencia rettgeri (3) | | | | | | | +--Serratia (1) | | | | | | | | | +--Serratia symbiotica str. Tucson (1) | | | | | | | +--Enterobacter pulveris (2) | | | | | | | +--Escherichia blattae DSM 4481 (2) | | | | | | | +--Proteus mirabilis (1) | | | | | | | +--Providencia rettgeri DSM 1131 (2) | | | | | | | +--Pantoea wallisii (1) | | | | | | | +--Serratia symbiotica (1) | | | | | +--Chromatiales (3) | | | | | | | +--Ectothiorhodospiraceae (1) | | | | | | | | | +--Thioalkalivibrio (1) | | | | | | | | | +--Thioalkalivibrio nitratireducens DSM 14787 (1) | | | | | | | +--Chromatiaceae (2) | | | | | | | +--Thiocapsa sp. KS1 (1) | | | | | | | +--Allochromatium vinosum DSM 180 (1) | | | | | +--Oceanospirillales (4) | | | | | | | +--Halomonadaceae (4) | | | | | | | +--Halotalea alkalilenta (1) | | | | | | | +--Kushneria marisflavi (1) | | | | | | | +--Salinicola sp. MIT1003 (1) | | | | | | | +--Halomonas (1) | | | | | | | +--Halomonas desiderata SP1 (1) | | | | | +--Pseudomonadales (43) | | | | | +--unclassifiedPseudomonadales (1) | | | | | | | +--Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210 (1) | | | | | +--Pseudomonadaceae (42) | | | | | +--Pseudomonas sp. HUK17 (1) | | | | | +--Pseudomonas sp. 5 (1) | | | | | +--Pseudomonas sp. Chol1 (1) | | | | | +--Pseudomonas sp. G5(2012) (1) | | | | | +--Pseudomonas sp. M30-35 (1) | | | | | +--Pseudomonas alkylphenolia (1) | | | | | +--Pseudomonas fluorescens HK44 (1) | | | | | +--Pseudomonas aeruginosa PAO1 (1) | | | | | +--Pseudomonas batumici (1) | | | | | +--Pseudomonas sp. GM78 (1) | | | | | +--Pseudomonas sp. URMO17WK12:I11 (1) | | | | | +--Serpens flexibilis (1) | | | | | +--Pseudomonas sp. UW4 (1) | | | | | +--Pseudomonas putida KT2440 (1) | | | | | +--Pseudomonas aeruginosa LESB58 (1) | | | | | +--Pseudomonas sp. VI4.1 (1) | | | | | +--Pseudomonas saudiphocaensis (2) | | | | | +--Pseudomonas entomophila L48 (2) | | | | | +--Pseudomonas stutzeri (1) | | | | | +--Pseudomonas sp. HPB0071 (2) | | | | | +--Pseudomonas stutzeri A1501 (3) | | | | | +--Pseudomonas fuscovaginae (1) | | | | | +--Pseudomonas sp. FeS53a (1) | | | | | +--Pseudomonas putida (1) | | | | | +--Pseudomonas sp. M47T1 (1) | | | | | +--Pseudomonas sp. BAY1663 (1) | | | | | +--Pseudomonas sp. BRH_c35 (1) | | | | | +--Pseudomonas (7) | | | | | | | +--Pseudomonasputidagroup (1) | | | | | | | | | +--Pseudomonas putida S11 (1) | | | | | | | +--Pseudomonasstutzerigroup (2) | | | | | | | | | +--Pseudomonas balearica DSM 6083 (2) | | | | | | | +--Pseudomonaspertucinogenagroup (1) | | | | | | | | | +--Pseudomonas denitrificans ATCC 13867 (1) | | | | | | | +--Pseudomonasaeruginosagroup (2) | | | | | | | | | +--Pseudomonasoleovorans/pseudoalcaligenesgroup (1) | | | | | | | | | | | +--Pseudomonas pseudoalcaligenes KF707 = NBRC 110670 (1) | | | | | | | | | +--Pseudomonas resinovorans NBRC 106553 (1) | | | | | | | +--Pseudomonas knackmussii B13 (1) | | | | | +--Pseudomonas sp. J237 (1) | | | | | +--Pseudomonas oryzihabitans (1) | | | | | +--Pseudomonas sp. Bc-h (1) | | | +--Betaproteobacteria (121) | | | | | +--unclassifiedBetaproteobacteria (2) | | | | | | | +--Candidatus Accumulibacter sp. 66-26 (1) | | | | | | | +--beta proteobacterium AAP99 (1) | | | | | +--Burkholderiales (99) | | | | | | | +--Alcaligenaceae (16) | | | | | | | | | +--Bordetella sp. AU3182 (1) | | | | | | | | | +--Oligella (1) | | | | | | | | | | | +--Oligella urethralis DNF00040 (1) | | | | | | | | | +--Bordetella ansorpii (1) | | | | | | | | | +--Achromobacter xylosoxidans A8 (1) | | | | | | | | | +--Alcaligenes sp. EGD-AK7 (1) | | | | | | | | | +--Bordetella hinzii (1) | | | | | | | | | +--Achromobacter xylosoxidans AXX-A (1) | | | | | | | | | +--Bordetella sp. N (1) | | | | | | | | | +--Pusillimonas sp. T7-7 (1) | | | | | | | | | +--Bordetella trematum (1) | | | | | | | | | +--Bordetella avium 197N (1) | | | | | | | | | +--Achromobacter piechaudii ATCC 43553 (1) | | | | | | | | | +--Achromobacter sp. DMS1 (1) | | | | | | | | | +--Paenalcaligenes hominis (1) | | | | | | | | | +--Bordetella genomosp. 8 (1) | | | | | | | | | +--Achromobacter (1) | | | | | | | | | +--Achromobacter piechaudii HLE (1) | | | | | | | +--Alcaligenaceae bacterium BZ59 (1) | | | | | | | +--Roseateles aquatilis (1) | | | | | | | +--Roseateles depolymerans (1) | | | | | | | +--Tepidimonas sp. AT-A2 (1) | | | | | | | +--Oxalobacteraceae (8) | | | | | | | | | +--Collimonas fungivorans Ter331 (1) | | | | | | | | | +--Janthinobacterium sp. KBS0711 (1) | | | | | | | | | +--Duganella sp. Leaf126 (1) | | | | | | | | | +--Collimonas arenae (1) | | | | | | | | | +--Duganella sp. Sac-22 (1) | | | | | | | | | +--Massilia sp. Root351 (1) | | | | | | | | | +--Massilia (1) | | | | | | | | | | | +--Massilia timonae CCUG 45783 (1) | | | | | | | | | +--Janthinobacterium (1) | | | | | | | | | +--Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 (1) | | | | | | | +--unclassifiedBurkholderiales (8) | | | | | | | | | +--BurkholderialesGeneraincertaesedis (6) | | | | | | | | | | | +--Mitsuaria sp. 7 (1) | | | | | | | | | | | +--Rubrivivax (1) | | | | | | | | | | | | | +--Rubrivivax gelatinosus IL144 (1) | | | | | | | | | | | +--Ideonella sakaiensis (1) | | | | | | | | | | | +--Rhizobacter sp. Root29 (1) | | | | | | | | | | | +--Rubrivivax sp. SCN 71-131 (1) | | | | | | | | | | | +--Paucibacter sp. KCTC 42545 (1) | | | | | | | | | +--Burkholderiales bacterium 68-10 (1) | | | | | | | | | +--Burkholderiales bacterium 66-5 (1) | | | | | | | +--Burkholderiaceae (51) | | | | | | | | | +--Burkholderia xenovorans LB400 (1) | | | | | | | | | +--Burkholderia fungorum (1) | | | | | | | | | +--Burkholderia sp. ST111 (1) | | | | | | | | | +--Paraburkholderia ribeironis (1) | | | | | | | | | +--Burkholderia glathei (1) | | | | | | | | | +--Burkholderia sp. MR1 (1) | | | | | | | | | +--Paraburkholderia sp. SOS3 (1) | | | | | | | | | +--Burkholderia sp. LMG 22936 (1) | | | | | | | | | +--Burkholderia sp. TJI49 (1) | | | | | | | | | +--Caballeronia peredens (1) | | | | | | | | | +--Burkholderia phymatum STM815 (1) | | | | | | | | | +--Burkholderia phenazinium (1) | | | | | | | | | +--Burkholderia sp. BR2004143571 (1) | | | | | | | | | +--Burkholderia gladioli BSR3 (1) | | | | | | | | | +--Burkholderia sp. SRS-W-2-2016 (1) | | | | | | | | | +--Burkholderia glumae BGR1 (1) | | | | | | | | | +--Paraburkholderia piptadeniae (1) | | | | | | | | | +--Burkholderia caryophylli (1) | | | | | | | | | +--Candidatus Burkholderia calva (1) | | | | | | | | | +--Caballeronia calidae (1) | | | | | | | | | +--Burkholderia terricola (1) | | | | | | | | | +--Burkholderia sp. LMG 22934 (1) | | | | | | | | | +--Paraburkholderia susongensis (1) | | | | | | | | | +--Burkholderia sp. H160 (1) | | | | | | | | | +--Burkholderia sp. SD3175 (1) | | | | | | | | | +--Burkholderia sp. AD24 (1) | | | | | | | | | +--Pandoraea pnomenusa (1) | | | | | | | | | +--Burkholderia sp. OLGA172 (2) | | | | | | | | | +--Burkholderia sacchari (1) | | | | | | | | | +--Burkholderia (9) | | | | | | | | | | | +--Burkholderia sp. TSV86 (1) | | | | | | | | | | | +--Burkholderia pseudomallei K96243 (1) | | | | | | | | | | | +--Burkholderia latens (1) | | | | | | | | | | | +--Burkholderia glumae PG1 (1) | | | | | | | | | | | +--Burkholderia vietnamiensis G4 (1) | | | | | | | | | | | +--Burkholderia multivorans ATCC 17616 (2) | | | | | | | | | | | +--Burkholderia cenocepacia J2315 (1) | | | | | | | | | | | +--Burkholderia singularis (1) | | | | | | | | | +--Burkholderia sp. A9 (1) | | | | | | | | | +--Lautropia mirabilis ATCC 51599 (1) | | | | | | | | | +--Burkholderia sp. LMG 22940 (1) | | | | | | | | | +--Burkholderia sp. RPE64 (1) | | | | | | | | | +--Caballeronia (1) | | | | | | | | | | | +--Caballeronia glathei PML1(12) (1) | | | | | | | | | +--Burkholderia sp. Leaf177 (1) | | | | | | | | | +--Cupriavidus sp. USMAA2-4 (1) | | | | | | | | | +--Burkholderia caribensis (1) | | | | | | | | | +--Burkholderia tropica (1) | | | | | | | | | +--Burkholderia sp. lig30 (1) | | | | | | | | | +--Burkholderia ubonensis (1) | | | | | | | | | +--Candidatus Burkholderia verschuerenii (1) | | | | | | | +--Comamonadaceae (12) | | | | | | | +--Comamonas testosteroni CNB-2 (1) | | | | | | | +--Hylemonella gracilis ATCC 19624 (1) | | | | | | | +--Comamonadaceae bacterium SCN 68-20 (1) | | | | | | | +--Pseudorhodoferax sp. Leaf267 (1) | | | | | | | +--Variovorax sp. PAMC 28711 (1) | | | | | | | +--Comamonas sp. SCN 67-35 (1) | | | | | | | +--Acidovorax sp. 12322-1 (1) | | | | | | | +--Comamonas (1) | | | | | | | | | +--Comamonas aquatica DA1877 (1) | | | | | | | +--Hydrogenophaga sp. PBC (1) | | | | | | | +--Delftia acidovorans SPH-1 (1) | | | | | | | +--Pseudacidovorax intermedius (1) | | | | | | | +--Acidovorax sp. MR-S7 (1) | | | | | +--Rhodocyclales (8) | | | | | | | +--Rhodocyclaceae (7) | | | | | | | | | +--Dechloromonas aromatica RCB (2) | | | | | | | | | +--Sulfuritalea (1) | | | | | | | | | | | +--Sulfuritalea hydrogenivorans sk43H (1) | | | | | | | | | +--Petrobacter sp. JHK30 (1) | | | | | | | | | +--Thauera (2) | | | | | | | | | | | +--Thauera linaloolentis 47Lol = DSM 12138 (1) | | | | | | | | | | | +--Thauera terpenica 58Eu (1) | | | | | | | | | +--Azonexus hydrophilus (1) | | | | | | | +--Rhodocyclales bacterium RIFCSPLOWO2_02_FULL_63_24 (1) | | | | | +--Neisseriales (6) | | | | | | | +--Chromobacteriaceae (1) | | | | | | | | | +--Chromobacteriumgroup (1) | | | | | | | | | +--Chromobacterium sp. LK11 (1) | | | | | | | +--Neisseriaceae (5) | | | | | | | +--Lutiella nitroferrum 2002 (1) | | | | | | | +--Aquitalea magnusonii (1) | | | | | | | +--Pseudogulbenkiania sp. NH8B (1) | | | | | | | +--Laribacter hongkongensis HLHK9 (2) | | | | | +--Nitrosomonadales (2) | | | | | | | +--Thiobacillaceae (2) | | | | | | | +--Thiobacillus sp. GWE1_62_9 (1) | | | | | | | +--Thiobacillus sp. SCN 63-57 (1) | | | | | +--Hydrogenophilales (4) | | | | | +--Hydrogenophilaceae (4) | | | | | +--Thiobacillus sp. SCN 64-317 (1) | | | | | +--Thiobacillus sp. SCN 65-179 (1) | | | | | +--Thiobacillus sp. SCN 63-374 (1) | | | | | +--Thiobacillus sp. SCN 63-1177 (1) | | | +--Deltaproteobacteria (4) | | | | | +--Myxococcales (3) | | | | | | | +--Cystobacterineae (3) | | | | | | | +--Myxococcaceae (3) | | | | | | | +--Anaeromyxobacter sp. Fw109-5 (1) | | | | | | | +--Anaeromyxobacter dehalogenans 2CP-C (1) | | | | | | | +--Anaeromyxobacter sp. K (1) | | | | | +--Desulfuromonadales (1) | | | | | +--Geobacteraceae (1) | | | | | +--Geobacter pickeringii (1) | | | +--delta/epsilonsubdivisions (9) | | | | | +--Deltaproteobacteria (9) | | | | | +--Myxococcales (2) | | | | | | | +--Cystobacterineae (2) | | | | | | | +--Anaeromyxobacteraceae (2) | | | | | | | +--Anaeromyxobacter sp. RBG_16_69_14 (2) | | | | | +--Desulfuromonadales (2) | | | | | | | +--Geobacteraceae (2) | | | | | | | +--Geobacter sp. OR-1 (1) | | | | | | | +--Geobacteraceae bacterium GWC2_55_20 (1) | | | | | +--Desulfobacterales (1) | | | | | | | +--Desulfobulbaceae (1) | | | | | | | +--Desulfocapsa (1) | | | | | | | +--Desulfocapsa sulfexigens DSM 10523 (1) | | | | | +--unclassifiedDeltaproteobacteria (4) | | | | | +--Deltaproteobacteria bacterium 13_1_40CM_3_69_14 (1) | | | | | +--Deltaproteobacteria bacterium 13_1_40CM_68_24 (2) | | | | | +--Deltaproteobacteria bacterium 13_1_40CM_4_68_19 (1) | | | +--Hydrogenophilalia (1) | | | +--Hydrogenophilales (1) | | | +--Hydrogenophilales bacterium RIFOXYA1_FULL_63_33 (1) | +--uncultured bacterium (1) | +--Firmicutes (9) | | | +--Clostridia (5) | | | | | +--Thermoanaerobacterales (1) | | | | | | | +--Thermoanaerobacteraceae (1) | | | | | | | +--Carboxydothermus hydrogenoformans Z-2901 (1) | | | | | +--Clostridiales (4) | | | | | +--ClostridialesFamilyXVIII.IncertaeSedis (3) | | | | | | | +--Symbiobacterium thermophilum (2) | | | | | | | +--Symbiobacterium thermophilum IAM 14863 (1) | | | | | +--Peptococcaceae (1) | | | | | +--Thermincola potens JR (1) | | | +--Negativicutes (1) | | | | | +--Selenomonadales (1) | | | | | +--Veillonellaceae (1) | | | | | +--Thermosinus carboxydivorans Nor1 (1) | | | +--Bacillales (3) | | | +--Bacillaceae (3) | | | +--Bacillus subterraneus (1) | | | +--Bacillus arseniciselenatis (1) | | | +--Bacillus sp. 1NLA3E (1) | +--Acidobacteria (9) | | | +--unclassifiedAcidobacteria (7) | | | | | +--Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18 (1) | | | | | +--Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29 (1) | | | | | +--Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21 (1) | | | | | +--Acidobacteria bacterium 13_1_40CM_4_65_8 (1) | | | | | +--Acidobacteria bacterium 13_1_40CM_65_14 (1) | | | | | +--Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b (1) | | | | | +--Acidobacteria bacterium 13_1_20CM_3_53_8 (1) | | | +--Solibacteres (2) | | | +--Solibacterales (2) | | | +--Solibacteraceae (2) | | | +--Candidatus Solibacter usitatus Ellin6076 (2) | +--Terrabacteriagroup (11) | | | +--Actinobacteria (2) | | | | | +--Actinobacteria (2) | | | | | +--Propionibacteriales (1) | | | | | | | +--Nocardioidaceae (1) | | | | | | | +--Mumia flava (1) | | | | | +--Micrococcales (1) | | | | | +--Microbacteriaceae (1) | | | | | +--Microbacterium sp. SUBG005 (1) | | | +--Armatimonadetes (1) | | | | | +--Armatimonadetes bacterium 13_1_40CM_64_14 (1) | | | +--Chloroflexi (1) | | | | | +--unclassifiedChloroflexi (1) | | | | | +--Chloroflexi bacterium 13_1_40CM_4_65_13 (1) | | | +--Firmicutes (7) | | | +--Clostridia (1) | | | | | +--Clostridiales (1) | | | | | +--Clostridialesincertaesedis (1) | | | | | +--ClostridialesFamilyXVI.IncertaeSedis (1) | | | | | +--Carboxydocella (1) | | | | | +--Carboxydocella sporoproducens DSM 16521 (1) | | | +--Bacilli (6) | | | +--Bacillales (6) | | | +--Bacillaceae (5) | | | | | +--Anaerobacillus sp. NB2006 (1) | | | | | +--Bacillus sp. FJAT-21945 (1) | | | | | +--Bacillus (3) | | | | | +--Bacillus azotoformans LMG 9581 (1) | | | | | +--Bacillus bataviensis LMG 21833 (1) | | | | | +--Bacillus vireti LMG 21834 (1) | | | +--unclassifiedBacillales (1) | | | +--Desulfuribacillus stibiiarsenatis (1) | +--PVCgroup (1) | +--Planctomycetes (1) | +--Planctomycetes bacterium RIFCSPLOWO2_02_FULL_50_16 (1)