# Species tree for RF01831 # Generated from Rfam version 14.10 | +--othersequences (2) | | | +--synthetic construct (2) | +--Bacteria (597) | | | +--Actinobacteria (1) | | | | | +--Actinobacteridae (1) | | | | | +--Actinomycetales (1) | | | | | +--Corynebacterineae (1) | | | | | +--Mycobacteriaceae (1) | | | | | +--Mycobacterium abscessus (1) | | | +--Proteobacteria (1) | | | | | +--Alphaproteobacteria (1) | | | | | +--Rhodospirillales (1) | | | | | +--Acetobacteraceae (1) | | | | | +--Acidiphilium (1) | | | | | +--Acidiphilium sp. CAG:727 (1) | | | +--unclassifiedBacteria (5) | | | | | +--bacterium 42_11 (1) | | | | | +--Bacteriacandidatephyla (4) | | | | | +--CandidatusAtribacteria (4) | | | | | +--Candidatus Atribacteria bacterium CG2_30_33_13 (1) | | | | | +--Atribacteria bacterium 34_128 (1) | | | | | +--Candidatus Atribacteria bacterium 4572_76 (1) | | | | | +--Candidatus Atribacteria bacterium RBG_19FT_COMBO_35_14 (1) | | | +--Spirochaetes (1) | | | | | +--Spirochaetia (1) | | | | | +--Spirochaetales (1) | | | | | +--Spirochaetaceae (1) | | | | | +--Treponema (1) | | | | | +--Treponema pedis str. T A4 (1) | | | +--Synergistetes bacterium SGP1 (1) | | | +--Synergistetes (2) | | | | | +--Synergistia (2) | | | | | +--Synergistales (2) | | | | | +--Synergistaceae (2) | | | | | +--Pyramidobacter piscolens W5455 (1) | | | | | +--Aminobacterium colombiense DSM 12261 (1) | | | +--Firmicutes (235) | | | | | +--Clostridia (143) | | | | | | | +--Thermoanaerobacterales (1) | | | | | | | | | +--Thermoanaerobacteraceae (1) | | | | | | | | | +--Tepidanaerobacter syntrophicus (1) | | | | | | | +--butyrate-producing bacterium SS3/4 (1) | | | | | | | +--Clostridiales bacterium 1_7_47FAA (1) | | | | | | | +--Halanaerobiales (5) | | | | | | | | | +--Halanaerobiaceae (5) | | | | | | | | | +--Halothermothrix orenii H 168 (2) | | | | | | | | | +--Halanaerobium hydrogeniformans (1) | | | | | | | | | +--Halanaerobium kushneri (1) | | | | | | | | | +--Halanaerobium praevalens DSM 2228 (1) | | | | | | | +--Natranaerobiales (4) | | | | | | | | | +--Natranaerobiaceae (4) | | | | | | | | | +--Natranaerobius trueperi (2) | | | | | | | | | +--Natranaerobius thermophilus JW/NM-WN-LF (2) | | | | | | | +--Clostridiales (131) | | | | | | | +--ClostridialesFamilyXII.IncertaeSedis (1) | | | | | | | | | +--Fusibacter sp. 3-D3-R-P8ASC2010 (1) | | | | | | | +--Peptostreptococcaceae (1) | | | | | | | | | +--Filifactor alocis ATCC 35896 (1) | | | | | | | +--Lachnospiraceae bacterium 9_1_43BFAA (1) | | | | | | | +--Eubacteriaceae (13) | | | | | | | | | +--Anaerofustis stercorihominis DSM 17244 (1) | | | | | | | | | +--Eubacterium limosum KIST612 (2) | | | | | | | | | +--Pseudoramibacter alactolyticus ATCC 23263 (1) | | | | | | | | | +--Acetobacterium wieringae (2) | | | | | | | | | +--Eubacterium siraeum DSM 15702 (1) | | | | | | | | | +--Eubacterium siraeum 70/3 (1) | | | | | | | | | +--Acetobacterium bakii (2) | | | | | | | | | +--Eubacterium rectale ATCC 33656 (1) | | | | | | | | | +--Eubacterium siraeum (1) | | | | | | | | | +--Eubacterium eligens ATCC 27750 (1) | | | | | | | +--Lachnospiraceae (17) | | | | | | | | | +--Marvinbryantia formatexigens DSM 14469 (2) | | | | | | | | | +--Roseburia hominis A2-183 (1) | | | | | | | | | +--Catonella morbi ATCC 51271 (1) | | | | | | | | | +--Pseudobutyrivibrio ruminis (1) | | | | | | | | | +--Butyrivibrio hungatei (1) | | | | | | | | | +--Oribacterium sinus F0268 (1) | | | | | | | | | +--Oribacterium sp. oral taxon 078 str. F0262 (1) | | | | | | | | | +--Clostridium lentocellum DSM 5427 (1) | | | | | | | | | +--Butyrivibrio proteoclasticus B316 (1) | | | | | | | | | +--Roseburia intestinalis XB6B4 (1) | | | | | | | | | +--Clostridium proteoclasticum (1) | | | | | | | | | +--Lachnobacterium bovis (1) | | | | | | | | | +--Butyrivibrio fibrisolvens 16/4 (1) | | | | | | | | | +--Johnsonella ignava ATCC 51276 (2) | | | | | | | | | +--Shuttleworthia satelles DSM 14600 (1) | | | | | | | +--Oscillospiraceae (2) | | | | | | | | | +--Oscillibacter valericigenes Sjm18-20 (2) | | | | | | | +--Ruminococcaceae (20) | | | | | | | | | +--Ruminococcus gnavus ATCC 29149 (1) | | | | | | | | | +--Anaerotruncus colihominis DSM 17241 (1) | | | | | | | | | +--Faecalibacterium prausnitzii (1) | | | | | | | | | +--Faecalibacterium prausnitzii M21/2 (1) | | | | | | | | | +--Faecalibacterium prausnitzii SL3/3 (1) | | | | | | | | | +--Ruminococcus albus 8 (2) | | | | | | | | | +--Ruminococcus obeum ATCC 29174 (1) | | | | | | | | | +--Ruminococcaceae bacterium D16 (2) | | | | | | | | | +--Ethanoligenens harbinense YUAN-3 (1) | | | | | | | | | +--Ruminococcus albus 7 (1) | | | | | | | | | +--Ruminococcus sp. SR1/5 (1) | | | | | | | | | +--Faecalibacterium prausnitzii A2-165 (1) | | | | | | | | | +--Ruminococcus sp. YE71 (2) | | | | | | | | | +--Faecalibacterium cf. prausnitzii KLE1255 (1) | | | | | | | | | +--Faecalibacterium prausnitzii L2-6 (1) | | | | | | | | | +--Ruminococcus flavefaciens (1) | | | | | | | | | +--Subdoligranulum variabile DSM 15176 (1) | | | | | | | +--ClostridialesFamilyXI.IncertaeSedis (12) | | | | | | | | | +--Peptoniphilus lacrimalis 315-B (1) | | | | | | | | | +--Finegoldia magna ATCC 29328 (1) | | | | | | | | | +--Anaerococcus prevotii ACS-065-V-Col13 (1) | | | | | | | | | +--Peptoniphilus sp. oral taxon 375 str. F0436 (1) | | | | | | | | | +--Anaerococcus lactolyticus ATCC 51172 (1) | | | | | | | | | +--Anaerococcus vaginalis ATCC 51170 (1) | | | | | | | | | +--Parvimonas micra (1) | | | | | | | | | +--Peptoniphilus sp. RMA 16757 (1) | | | | | | | | | +--Parvimonas micra ATCC 33270 (1) | | | | | | | | | +--Peptoniphilus sp. oral taxon 386 str. F0131 (3) | | | | | | | +--Lachnospiraceae bacterium 3_1_57FAA_CT1 (1) | | | | | | | +--Clostridiaceae (54) | | | | | | | | | +--Clostridium sp. D3RC-2 (1) | | | | | | | | | +--Clostridium saccharolyticum WM1 (4) | | | | | | | | | +--Clostridium tetani E88 (2) | | | | | | | | | +--Clostridium carboxidivorans P7 (1) | | | | | | | | | +--Clostridium bolteae ATCC BAA-613 (1) | | | | | | | | | +--Clostridium methylpentosum DSM 5476 (1) | | | | | | | | | +--Clostridium botulinum F str. Langeland (1) | | | | | | | | | +--Clostridium fallax (1) | | | | | | | | | +--Clostridium cellulosi (1) | | | | | | | | | +--Clostridium cellulolyticum H10 (2) | | | | | | | | | +--Clostridium botulinum C str. Eklund (1) | | | | | | | | | +--Clostridium saccharoperbutylacetonicum ATCC 27021 (1) | | | | | | | | | +--Clostridium sticklandii DSM 519 (1) | | | | | | | | | +--Clostridium purinilyticum (1) | | | | | | | | | +--Clostridium sp. DMHC 10 (2) | | | | | | | | | +--Clostridium hathewayi WAL-18680 (1) | | | | | | | | | +--Clostridium roseum (1) | | | | | | | | | +--Oxobacter pfennigii (2) | | | | | | | | | +--Clostridium sulfidigenes (1) | | | | | | | | | +--Clostridium novyi NT (2) | | | | | | | | | +--Clostridium botulinum D str. 1873 (1) | | | | | | | | | +--Clostridium cf. saccharolyticum K10 (1) | | | | | | | | | +--Clostridium botulinum B str. Eklund 17B (1) | | | | | | | | | +--Clostridium asparagiforme DSM 15981 (1) | | | | | | | | | +--Clostridium acetobutylicum ATCC 824 (2) | | | | | | | | | +--Clostridium kluyveri DSM 555 (4) | | | | | | | | | +--Clostridium taeniosporum (1) | | | | | | | | | +--Clostridium hungatei (1) | | | | | | | | | +--Clostridium cadaveris (1) | | | | | | | | | +--Alkaliphilus oremlandii OhILAs (2) | | | | | | | | | +--Clostridium celerecrescens (1) | | | | | | | | | +--Alkaliphilus metalliredigens QYMF (4) | | | | | | | | | +--Clostridium hylemonae DSM 15053 (1) | | | | | | | | | +--Clostridium symbiosum WAL-14163 (2) | | | | | | | | | +--Clostridium neopropionicum (1) | | | | | | | | | +--Clostridium botulinum A str. ATCC 3502 (2) | | | | | | | +--Christensenellaceae (1) | | | | | | | | | +--Christensenella minuta (1) | | | | | | | +--Syntrophomonadaceae (1) | | | | | | | | | +--Dethiobacter alkaliphilus AHT 1 (1) | | | | | | | +--Pseudoflavonifractor capillosus ATCC 29799 (2) | | | | | | | +--Lachnospiraceae bacterium 2_1_46FAA (1) | | | | | | | +--Catabacteriaceae (1) | | | | | | | | | +--Catabacter hongkongensis (1) | | | | | | | +--Lachnospiraceae bacterium A4 (1) | | | | | | | +--Lachnospiraceae bacterium 28-4 (1) | | | | | | | +--Lachnospiraceae bacterium 5_1_57FAA (1) | | | | | +--Lactobacillales (83) | | | | | | | +--Carnobacteriaceae (4) | | | | | | | | | +--Trichococcus sp. EX-07 (1) | | | | | | | | | +--Carnobacterium sp. LMG 26642 (1) | | | | | | | | | +--Granulicatella elegans ATCC 700633 (1) | | | | | | | | | +--Granulicatella adiacens ATCC 49175 (1) | | | | | | | +--Weissella paramesenteroides ATCC 33313 (1) | | | | | | | +--Weissella viridescens (1) | | | | | | | +--Weissella kandleri (1) | | | | | | | +--Weissella cibaria (1) | | | | | | | +--Lactobacillaceae (35) | | | | | | | | | +--Sharpea azabuensis (1) | | | | | | | | | +--Paralactobacillus selangorensis (1) | | | | | | | | | +--Lactobacillus farciminis (2) | | | | | | | | | +--Pediococcus stilesii (1) | | | | | | | | | +--Lactobacillus reuteri DSM 20016 (1) | | | | | | | | | +--Lactobacillus rhamnosus MTCC 5462 (1) | | | | | | | | | +--Lactobacillus kunkeei (1) | | | | | | | | | +--Lactobacillus sp. EMML 3041 (1) | | | | | | | | | +--Lactobacillus reuteri JCM 1112 (1) | | | | | | | | | +--Lactobacillus oris PB013-T2-3 (1) | | | | | | | | | +--Lactobacillus casei ATCC 334 (2) | | | | | | | | | +--Lactobacillus ruminis ATCC 27782 (1) | | | | | | | | | +--Lactobacillus animalis (1) | | | | | | | | | +--Pediococcus argentinicus (1) | | | | | | | | | +--Pediococcus acidilactici DSM 20284 (1) | | | | | | | | | +--Lactobacillus pobuzihii (1) | | | | | | | | | +--Lactobacillus sakei subsp. sakei 23K (2) | | | | | | | | | +--Lactobacillus brevis subsp. gravesensis ATCC 27305 (1) | | | | | | | | | +--Lactobacillus acidipiscis (1) | | | | | | | | | +--Lactobacillus salivarius UCC118 (2) | | | | | | | | | +--Lactobacillus sp. 1.1424 (1) | | | | | | | | | +--Lactobacillus brevis ATCC 367 (2) | | | | | | | | | +--Lactobacillus backi (1) | | | | | | | | | +--Pediococcus pentosaceus ATCC 25745 (2) | | | | | | | | | +--Lactobacillus sanfranciscensis TMW 1.1304 (1) | | | | | | | | | +--Lactobacillus secaliphilus (1) | | | | | | | | | +--Lactobacillus fructivorans (1) | | | | | | | | | +--Lactobacillus reuteri 100-23 (1) | | | | | | | | | +--Lactobacillus coleohominis 101-4-CHN (1) | | | | | | | +--Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 (1) | | | | | | | +--Streptococcaceae (9) | | | | | | | | | +--Streptococcus mutans (1) | | | | | | | | | +--Streptococcus gallolyticus (1) | | | | | | | | | +--Streptococcus parauberis NCFD 2020 (1) | | | | | | | | | +--Lactococcus garvieae Lg2 (1) | | | | | | | | | +--Streptococcus mutans UA159 (1) | | | | | | | | | +--Streptococcus suis 05ZYH33 (2) | | | | | | | | | +--Streptococcus macacae NCTC 11558 (1) | | | | | | | | | +--Streptococcus uberis 0140J (1) | | | | | | | +--Weissella sp. 1119-1A-09 (1) | | | | | | | +--Enterococcaceae (21) | | | | | | | | | +--Pilibacter termitis (1) | | | | | | | | | +--Enterococcus ratti (1) | | | | | | | | | +--Enterococcus aquimarinus (1) | | | | | | | | | +--Enterococcus italicus DSM 15952 (1) | | | | | | | | | +--Enterococcus faecalis V583 (2) | | | | | | | | | +--Enterococcus sp. CCM4360 (1) | | | | | | | | | +--Tetragenococcus halophilus NBRC 12172 (1) | | | | | | | | | +--Enterococcus devriesei (1) | | | | | | | | | +--Melissococcus plutonius ATCC 35311 (1) | | | | | | | | | +--Enterococcus faecium DO (2) | | | | | | | | | +--Enterococcus sp. HAMBI 3055 (1) | | | | | | | | | +--Enterococcus casseliflavus EC20 (1) | | | | | | | | | +--Enterococcus canis (1) | | | | | | | | | +--Enterococcus hermanniensis (1) | | | | | | | | | +--Enterococcus thailandicus (2) | | | | | | | | | +--Enterococcus termitis (1) | | | | | | | | | +--Enterococcus hirae ATCC 9790 (1) | | | | | | | | | +--Vagococcus teuberi (1) | | | | | | | +--Leuconostoc citreum KM20 (1) | | | | | | | +--Weissella koreensis KACC 15510 (1) | | | | | | | +--Fructobacillus fructosus KCTC 3544 (1) | | | | | | | +--Aerococcaceae (5) | | | | | | | +--Aerococcus urinaehominis (1) | | | | | | | +--Aerococcus urinae ACS-120-V-Col10a (1) | | | | | | | +--Eremococcus coleocola ACS-139-V-Col8 (1) | | | | | | | +--Abiotrophia defectiva ATCC 49176 (1) | | | | | | | +--Aerococcus christensenii (1) | | | | | +--Negativicutes (2) | | | | | | | +--Selenomonadales (2) | | | | | | | +--Veillonellaceae (2) | | | | | | | +--Mitsuokella multacida DSM 20544 (1) | | | | | | | +--Megamonas hypermegale ART12/1 (1) | | | | | +--Bacillales (1) | | | | | | | +--Sporolactobacillaceae (1) | | | | | | | +--Sporolactobacillus inulinus CASD (1) | | | | | +--Erysipelotrichi (6) | | | | | +--Erysipelotrichales (6) | | | | | +--Eubacterium dolichum DSM 3991 (1) | | | | | +--Erysipelotrichaceae (2) | | | | | | | +--Holdemania filiformis DSM 12042 (1) | | | | | | | +--Erysipelothrix rhusiopathiae str. Fujisawa (1) | | | | | +--Eubacterium biforme DSM 3989 (1) | | | | | +--Erysipelotrichaceae bacterium 3_1_53 (1) | | | | | +--Eubacterium cylindroides T2-87 (1) | | | +--Tenericutes (3) | | | | | +--Mollicutes (3) | | | | | +--Acholeplasmatales (3) | | | | | +--Acholeplasmataceae (3) | | | | | +--Acholeplasma oculi (1) | | | | | +--Acholeplasma laidlawii PG-8A (1) | | | | | +--Acholeplasma brassicae (1) | | | +--Terrabacteriagroup (345) | | | | | +--Tenericutes (5) | | | | | | | +--Candidatus Izimaplasma sp. HR1 (1) | | | | | | | +--Mollicutes (1) | | | | | | | | | +--Acholeplasmatales (1) | | | | | | | | | +--Acholeplasmataceae (1) | | | | | | | | | +--Acholeplasma (1) | | | | | | | | | +--Acholeplasma palmae J233 (1) | | | | | | | +--Candidatus Izimaplasma sp. HR2 (1) | | | | | | | +--Tenericutes bacterium RIFOXYB2_FULL_36_25 (1) | | | | | | | +--Tenericutes bacterium GWD2_38_27 (1) | | | | | +--Firmicutes (340) | | | | | +--Firmicutes bacterium CAG:170 (1) | | | | | +--Firmicutes bacterium CAG:176 (1) | | | | | +--Firmicutes bacterium CAG:308 (1) | | | | | +--Firmicutes bacterium CAG:103 (1) | | | | | +--Firmicutes bacterium CAG:124 (1) | | | | | +--unclassifiedFirmicutessensustricto (6) | | | | | | | +--Firmicutes bacterium CAG:176_63_11 (1) | | | | | | | +--Firmicutes bacterium CAG:176_59_8 (1) | | | | | | | +--Firmicutes bacterium ASF500 (1) | | | | | | | +--Firmicutes bacterium CAG:129_59_24 (1) | | | | | | | +--Firmicutes bacterium CAG:110_56_8 (1) | | | | | | | +--Firmicutes bacterium M10-2 (1) | | | | | +--Firmicutes bacterium CAG:646 (1) | | | | | +--Erysipelotrichia (5) | | | | | | | +--Erysipelotrichales (5) | | | | | | | +--Erysipelotrichaceae (5) | | | | | | | +--Faecalibaculum rodentium (1) | | | | | | | +--Dubosiella newyorkensis (1) | | | | | | | +--Kandleria (1) | | | | | | | | | +--Kandleria vitulina DSM 20405 (1) | | | | | | | +--Erysipelothrix larvae (1) | | | | | | | +--Coprobacillus (1) | | | | | | | +--Coprobacillus sp. CAG:826 (1) | | | | | +--Firmicutes bacterium CAG:137 (2) | | | | | +--Negativicutes (4) | | | | | | | +--Selenomonadales (2) | | | | | | | | | +--Sporomusaceae (1) | | | | | | | | | | | +--Anaerosporomusa subterranea (1) | | | | | | | | | +--Selenomonadaceae (1) | | | | | | | | | +--Megamonas (1) | | | | | | | | | +--Megamonas funiformis YIT 11815 (1) | | | | | | | +--Veillonellales (2) | | | | | | | +--Veillonellaceae (2) | | | | | | | +--Dialister (2) | | | | | | | +--Dialister succinatiphilus YIT 11850 (1) | | | | | | | +--Dialister sp. CAG:486 (1) | | | | | +--Firmicutes bacterium CAG:424 (1) | | | | | +--Firmicutes bacterium CAG:227 (1) | | | | | +--Firmicutes bacterium CAG:466 (1) | | | | | +--Firmicutes bacterium CAG:475 (1) | | | | | +--Firmicutes bacterium CAG:536 (1) | | | | | +--Firmicutes bacterium CAG:110 (1) | | | | | +--Firmicutes bacterium CAG:145 (1) | | | | | +--Firmicutes bacterium CAG:24 (1) | | | | | +--Firmicutes bacterium CAG:41 (1) | | | | | +--Firmicutes bacterium CAG:272 (1) | | | | | +--Firmicutes bacterium CAG:83 (1) | | | | | +--Clostridia (165) | | | | | | | +--Thermoanaerobacterales (1) | | | | | | | | | +--Thermoanaerobacteraceae (1) | | | | | | | | | +--Tepidanaerobacter (1) | | | | | | | | | +--Tepidanaerobacter acetatoxydans Re1 (1) | | | | | | | +--unclassifiedClostridia (1) | | | | | | | | | +--Clostridia bacterium BRH_c25 (1) | | | | | | | +--Halanaerobiales (1) | | | | | | | | | +--Halanaerobiaceae (1) | | | | | | | | | +--Halanaerobium (1) | | | | | | | | | +--Halanaerobiumsaccharolyticum (1) | | | | | | | | | +--Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 (1) | | | | | | | +--Clostridiales (162) | | | | | | | +--Clostridialesincertaesedis (3) | | | | | | | | | +--ClostridialesFamilyXIII.IncertaeSedis (3) | | | | | | | | | +--Eubacterium infirmum F0142 (1) | | | | | | | | | +--Clostridiales bacterium S5-A14a (1) | | | | | | | | | +--Eubacterium brachy ATCC 33089 (1) | | | | | | | +--Lachnospiraceae (38) | | | | | | | | | +--Blautia sp. An249 (2) | | | | | | | | | +--Lachnospiraceae bacterium (1) | | | | | | | | | +--Blautia sp. An46 (1) | | | | | | | | | +--Blautia sp. YL58 (1) | | | | | | | | | +--Lachnospiraceae bacterium CAG:364 (1) | | | | | | | | | +--Lachnoclostridium sp. An131 (2) | | | | | | | | | +--Dorea (1) | | | | | | | | | | | +--Dorea sp. CAG:317 (1) | | | | | | | | | +--Pseudobutyrivibrio (1) | | | | | | | | | | | +--Pseudobutyrivibrio xylanivorans DSM 14809 (1) | | | | | | | | | +--Lachnobacterium (1) | | | | | | | | | | | +--Lachnobacterium bovis DSM 14045 (1) | | | | | | | | | +--Anaerocolumna (3) | | | | | | | | | | | +--Anaerocolumna jejuensis DSM 15929 (2) | | | | | | | | | | | +--Anaerocolumna xylanovorans DSM 12503 (1) | | | | | | | | | +--Roseburia (3) | | | | | | | | | | | +--Roseburia sp. CAG:100 (1) | | | | | | | | | | | +--Roseburia sp. CAG:18 (1) | | | | | | | | | | | +--Roseburia sp. CAG:182 (1) | | | | | | | | | +--Lachnospiraceae bacterium TWA4 (1) | | | | | | | | | +--Lachnospiraceae bacterium JC7 (1) | | | | | | | | | +--Butyrivibrio (1) | | | | | | | | | | | +--Butyrivibrio fibrisolvens DSM 3071 (1) | | | | | | | | | +--Lachnospiraceae bacterium COE1 (1) | | | | | | | | | +--Anaerosporobacter (1) | | | | | | | | | | | +--Anaerosporobacter mobilis DSM 15930 (1) | | | | | | | | | +--Lachnoclostridium sp. An14 (1) | | | | | | | | | +--Lachnoclostridium sp. An118 (1) | | | | | | | | | +--Lachnoclostridium sp. An196 (2) | | | | | | | | | +--Roseburia sp. 831b (1) | | | | | | | | | +--Robinsoniella sp. RHS (1) | | | | | | | | | +--Herbinix luporum (1) | | | | | | | | | +--Blautia (7) | | | | | | | | | | | +--Blautia sp. CAG:257 (2) | | | | | | | | | | | +--Blautia sp. CAG:237 (1) | | | | | | | | | | | +--Blautia sp. CAG:37 (1) | | | | | | | | | | | +--Blautia sp. CAG:52 (2) | | | | | | | | | | | +--Blautia hydrogenotrophica CAG:147 (1) | | | | | | | | | +--Roseburia sp. 40_7 (1) | | | | | | | | | +--Lachnoclostridium sp. YL32 (1) | | | | | | | +--Ruminococcaceae (36) | | | | | | | | | +--Sporobacter (1) | | | | | | | | | | | +--Sporobacter termitidis DSM 10068 (1) | | | | | | | | | +--Subdoligranulum sp. 4_3_54A2FAA (1) | | | | | | | | | +--Faecalibacterium sp. CAG:82-related_59_9 (1) | | | | | | | | | +--Ruminococcus sp. 37_24 (1) | | | | | | | | | +--Ruminococcus (20) | | | | | | | | | | | +--Ruminococcus sp. CAG:330 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:254 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:403 (1) | | | | | | | | | | | +--Ruminococcus flavefaciens 007c (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:563 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:108 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:60 (2) | | | | | | | | | | | +--Ruminococcus gnavus CAG:126 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:353 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:382 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:579 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:724 (1) | | | | | | | | | | | +--Ruminococcus callidus ATCC 27760 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:9 (2) | | | | | | | | | | | +--Ruminococcus sp. CAG:57 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:17 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:624 (1) | | | | | | | | | | | +--Ruminococcus obeum CAG:39 (1) | | | | | | | | | +--Subdoligranulum sp. 60_17 (1) | | | | | | | | | +--Ruminococcaceae bacterium CPB6 (1) | | | | | | | | | +--Ruminiclostridium (2) | | | | | | | | | | | +--[Clostridium] termitidis CT1112 (1) | | | | | | | | | | | +--[Clostridium]stercorarium (1) | | | | | | | | | | | +--[Clostridium] stercorarium subsp. stercorarium DSM 8532 (1) | | | | | | | | | +--Ruminococcus sp. DSM 100440 (1) | | | | | | | | | +--Faecalibacterium (3) | | | | | | | | | | | +--Faecalibacterium sp. CAG:74 (1) | | | | | | | | | | | +--Faecalibacterium sp. CAG:1138 (1) | | | | | | | | | | | +--Faecalibacterium sp. CAG:82 (1) | | | | | | | | | +--Ruminococcus sp. CAG:9-related_41_34 (1) | | | | | | | | | +--Anaerotruncus sp. G3(2012) (1) | | | | | | | | | +--Papillibacter (1) | | | | | | | | | | | +--Papillibacter cinnamivorans DSM 12816 (1) | | | | | | | | | +--Subdoligranulum (1) | | | | | | | | | +--Subdoligranulum sp. CAG:314 (1) | | | | | | | +--Oscillospiraceae (5) | | | | | | | | | +--Oscillibacter sp. 1-3 (1) | | | | | | | | | +--Oscillibacter (2) | | | | | | | | | | | +--Oscillibacter sp. CAG:241 (1) | | | | | | | | | | | +--Oscillibacter sp. CAG:155 (1) | | | | | | | | | +--Oscillibacter sp. 57_20 (1) | | | | | | | | | +--Oscillibacter sp. KLE 1745 (1) | | | | | | | +--unclassifiedClostridiales (16) | | | | | | | | | +--Proteiniborus sp. DW1 (2) | | | | | | | | | +--Clostridiales bacterium PH28_bin88 (1) | | | | | | | | | +--Clostridiales bacterium CHKCI006 (1) | | | | | | | | | +--Clostridiales bacterium 44_9 (1) | | | | | | | | | +--Clostridiales bacterium 38-18 (1) | | | | | | | | | +--Clostridiales bacterium 38_11 (1) | | | | | | | | | +--Clostridiales bacterium KA00274 (1) | | | | | | | | | +--Epulopiscium sp. Nele67-Bin004 (1) | | | | | | | | | +--Clostridiales bacterium GWF2_36_10 (1) | | | | | | | | | +--Clostridiales bacterium GWC2_40_7 (1) | | | | | | | | | +--unclassifiedClostridiales(miscellaneous) (1) | | | | | | | | | | | +--Clostridiales bacterium oral taxon 876 str. F0540 (1) | | | | | | | | | +--Epulopiscium sp. Nele67-Bin005 (1) | | | | | | | | | +--Clostridiales bacterium (1) | | | | | | | | | +--Clostridiales bacterium GWF2_38_85 (1) | | | | | | | | | +--Epulopiscium sp. Nuni2H_MBin001 (1) | | | | | | | +--Peptostreptococcaceae (2) | | | | | | | | | +--Criibacterium bergeronii (2) | | | | | | | +--Clostridiaceae (48) | | | | | | | | | +--Clostridium sp. BL8 (1) | | | | | | | | | +--Clostridium (29) | | | | | | | | | | | +--Clostridium clostridioforme CAG:132 (1) | | | | | | | | | | | +--Clostridium sp. CAG:352 (1) | | | | | | | | | | | +--Clostridium sp. CAG:226 (1) | | | | | | | | | | | +--Clostridium sp. CAG:7 (1) | | | | | | | | | | | +--Clostridium sp. CAG:307 (1) | | | | | | | | | | | +--Clostridium acidisoli DSM 12555 (1) | | | | | | | | | | | +--Clostridium sp. CAG:169 (1) | | | | | | | | | | | +--Clostridium sp. CAG:299 (1) | | | | | | | | | | | +--Clostridium sp. CAG:1024 (1) | | | | | | | | | | | +--Clostridium sp. CAG:253 (1) | | | | | | | | | | | +--Clostridium colicanis DSM 13634 (1) | | | | | | | | | | | +--Clostridium sp. CAG:964 (1) | | | | | | | | | | | +--Clostridium hathewayi CAG:224 (1) | | | | | | | | | | | +--Clostridium tyrobutyricum DIVETGP (1) | | | | | | | | | | | +--Clostridium tetanomorphum DSM 665 (1) | | | | | | | | | | | +--Clostridium sp. CAG:242 (1) | | | | | | | | | | | +--Clostridium sp. CAG:349 (1) | | | | | | | | | | | +--Clostridium autoethanogenum DSM 10061 (1) | | | | | | | | | | | +--Clostridium sp. CAG:452 (1) | | | | | | | | | | | +--Clostridium saccharobutylicum DSM 13864 (1) | | | | | | | | | | | +--Clostridium sp. CAG:448 (1) | | | | | | | | | | | +--Clostridium homopropionicum DSM 5847 (1) | | | | | | | | | | | +--Clostridium sp. CAG:138 (1) | | | | | | | | | | | +--Clostridium sp. CAG:571 (1) | | | | | | | | | | | +--Clostridium acetireducens DSM 10703 (1) | | | | | | | | | | | +--Clostridium nexile CAG:348 (1) | | | | | | | | | | | +--Clostridium bolteae CAG:59 (1) | | | | | | | | | | | +--Clostridium sp. CAG:58 (1) | | | | | | | | | | | +--Clostridium sp. CAG:43 (1) | | | | | | | | | +--Geosporobacter ferrireducens (1) | | | | | | | | | +--Clostridium sp. ATCC 29733 (1) | | | | | | | | | +--Lactonifactor (1) | | | | | | | | | | | +--Lactonifactor longoviformis DSM 17459 (1) | | | | | | | | | +--Clostridium sp. W14A (3) | | | | | | | | | +--Caloramator quimbayensis (1) | | | | | | | | | +--Clostridium sp. N3C (1) | | | | | | | | | +--Hathewaya (1) | | | | | | | | | | | +--Hathewaya proteolytica DSM 3090 (1) | | | | | | | | | +--Clostridium amylolyticum (1) | | | | | | | | | +--Butyricicoccus (1) | | | | | | | | | | | +--Butyricicoccus pullicaecorum 1.2 (1) | | | | | | | | | +--Clostridium tepidum (1) | | | | | | | | | +--Clostridium sp. HMP27 (1) | | | | | | | | | +--Clostridium oryzae (2) | | | | | | | | | +--Lutispora (2) | | | | | | | | | | | +--Lutispora thermophila DSM 19022 (2) | | | | | | | | | +--Clostridium sp. FS41 (1) | | | | | | | +--Eubacteriaceae (14) | | | | | | | +--Garciella (1) | | | | | | | | | +--Garciella nitratireducens DSM 15102 (1) | | | | | | | +--Acetobacterium (2) | | | | | | | | | +--Acetobacterium woodii DSM 1030 (2) | | | | | | | +--Eubacterium sp. 3_1_31 (1) | | | | | | | +--Eubacterium (10) | | | | | | | +--Eubacterium sp. CAG:841 (1) | | | | | | | +--Eubacterium sp. CAG:202 (1) | | | | | | | +--Eubacterium sp. CAG:76 (1) | | | | | | | +--Eubacterium sp. CAG:786 (1) | | | | | | | +--Eubacterium sp. CAG:38 (2) | | | | | | | +--Eubacterium dolichum CAG:375 (1) | | | | | | | +--Eubacterium sp. CAG:252 (1) | | | | | | | +--Eubacterium sp. CAG:581 (1) | | | | | | | +--Eubacterium sp. CAG:86 (1) | | | | | +--Firmicutes bacterium CAG:56 (1) | | | | | +--Firmicutes bacterium CAG:238 (1) | | | | | +--Bacilli (117) | | | | | | | +--Lactobacillales (117) | | | | | | | +--Leuconostocaceae (6) | | | | | | | | | +--Leuconostoc (2) | | | | | | | | | | | +--Leuconostoc gelidum JB7 (1) | | | | | | | | | | | +--Leuconostoc pseudomesenteroides PS12 (1) | | | | | | | | | +--Fructobacillus sp. EFB-N1 (1) | | | | | | | | | +--Weissella (2) | | | | | | | | | | | +--Weissella halotolerans DSM 20190 (1) | | | | | | | | | | | +--Weissella confusa LBAE C39-2 (1) | | | | | | | | | +--Leuconostoc sp. DORA_2 (1) | | | | | | | +--Streptococcaceae (12) | | | | | | | | | +--Streptococcus sp. DD10 (1) | | | | | | | | | +--Streptococcus cuniculi (1) | | | | | | | | | +--Streptococcus sp. DD13 (1) | | | | | | | | | +--Streptococcus (5) | | | | | | | | | | | +--Streptococcus sobrinus W1703 (1) | | | | | | | | | | | +--Streptococcusanginosusgroup (1) | | | | | | | | | | | | | +--Streptococcus intermedius B196 (1) | | | | | | | | | | | +--Streptococcus agalactiae LMG 14747 (1) | | | | | | | | | | | +--Streptococcus ratti FA-1 = DSM 20564 (1) | | | | | | | | | | | +--Streptococcus lutetiensis 033 (1) | | | | | | | | | +--Streptococcus sp. 'caviae' (1) | | | | | | | | | +--Streptococcus sp. HSISB1 (1) | | | | | | | | | +--Floricoccus tropicus (1) | | | | | | | | | +--Streptococcus varani (1) | | | | | | | +--Carnobacteriaceae (9) | | | | | | | | | +--Atopostipes (1) | | | | | | | | | | | +--Atopostipes suicloacalis DSM 15692 (1) | | | | | | | | | +--Jeotgalibaca sp. PTS2502 (1) | | | | | | | | | +--Marinilactibacillus sp. 15R (1) | | | | | | | | | +--Alkalibacterium sp. AK22 (1) | | | | | | | | | +--Carnobacterium (3) | | | | | | | | | | | +--Carnobacterium inhibens subsp. gilichinskyi (1) | | | | | | | | | | | +--Carnobacterium maltaromaticum LMA28 (1) | | | | | | | | | | | +--Carnobacterium divergens DSM 20623 (1) | | | | | | | | | +--Alkalibacterium sp. 20 (1) | | | | | | | | | +--Carnobacterium sp. CP1 (1) | | | | | | | +--Enterococcaceae (33) | | | | | | | | | +--Enterococcus sp. HSIEG1 (2) | | | | | | | | | +--Enterococcus sp. 9E7_DIV0242 (1) | | | | | | | | | +--Enterococcus sp. 7F3_DIV0205 (1) | | | | | | | | | +--Enterococcus sp. 6C8_DIV0013 (1) | | | | | | | | | +--Catellicoccus (1) | | | | | | | | | | | +--Catellicoccus marimammalium M35/04/3 (1) | | | | | | | | | +--Enterococcus (16) | | | | | | | | | | | +--Enterococcus dispar ATCC 51266 (1) | | | | | | | | | | | +--Enterococcus durans ATCC 6056 (1) | | | | | | | | | | | +--Enterococcus pallens ATCC BAA-351 (1) | | | | | | | | | | | +--Enterococcus phoeniculicola ATCC BAA-412 (2) | | | | | | | | | | | +--Enterococcus columbae DSM 7374 = ATCC 51263 (1) | | | | | | | | | | | +--Enterococcus villorum ATCC 700913 (1) | | | | | | | | | | | +--Enterococcus asini ATCC 700915 (1) | | | | | | | | | | | +--Enterococcus cecorum DSM 20682 = ATCC 43198 (1) | | | | | | | | | | | +--Enterococcus mundtii QU 25 (1) | | | | | | | | | | | +--Enterococcus sulfureus ATCC 49903 (1) | | | | | | | | | | | +--Enterococcussaccharolyticus (1) | | | | | | | | | | | | | +--Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076 (1) | | | | | | | | | | | +--Enterococcus avium ATCC 14025 (1) | | | | | | | | | | | +--Enterococcus gilvus ATCC BAA-350 (1) | | | | | | | | | | | +--Enterococcus faecalis 13-SD-W-01 (1) | | | | | | | | | | | +--Enterococcus haemoperoxidus ATCC BAA-382 (1) | | | | | | | | | +--Enterococcus sp. 2G9_DIV0600 (1) | | | | | | | | | +--Enterococcus sp. 4G2_DIV0659 (1) | | | | | | | | | +--Enterococcus sp. 9D6_DIV0238 (1) | | | | | | | | | +--Enterococcus sp. RIT-PI-f (1) | | | | | | | | | +--Vagococcus (2) | | | | | | | | | | | +--Vagococcus fluvialis bH819 (1) | | | | | | | | | | | +--Vagococcus lutrae LBD1 (1) | | | | | | | | | +--Enterococcus sp. 3H8_DIV0648 (1) | | | | | | | | | +--Enterococcus sp. 8G7_MSG3316 (2) | | | | | | | | | +--Tetragenococcus (1) | | | | | | | | | | | +--Tetragenococcus muriaticus 3MR10-3 (1) | | | | | | | | | +--Enterococcus sp. 10A9_DIV0425 (1) | | | | | | | +--Lactobacillaceae (52) | | | | | | | | | +--Lactobacillus (47) | | | | | | | | | | | +--Lactobacillus brantae DSM 23927 (1) | | | | | | | | | | | +--Lactobacillus cacaonum DSM 21116 (1) | | | | | | | | | | | +--Lactobacillus senmaizukei DSM 21775 = NBRC 103853 (1) | | | | | | | | | | | +--Lactobacillus algidus DSM 15638 (1) | | | | | | | | | | | +--Lactobacillus florum 8D (1) | | | | | | | | | | | +--Lactobacillus concavus DSM 17758 (1) | | | | | | | | | | | +--Lactobacillusaviarius (1) | | | | | | | | | | | | | +--Lactobacillus aviarius subsp. araffinosus DSM 20653 (1) | | | | | | | | | | | +--Lactobacillus agilis DSM 20509 (1) | | | | | | | | | | | +--Lactobacillus buchneri CD034 (1) | | | | | | | | | | | +--Lactobacillus ozensis DSM 23829 = JCM 17196 (1) | | | | | | | | | | | +--Lactobacillus namurensis DSM 19117 (1) | | | | | | | | | | | +--Lactobacillus perolens DSM 12744 (1) | | | | | | | | | | | +--Lactobacillus oeni DSM 19972 (1) | | | | | | | | | | | +--Lactobacillus hayakitensis DSM 18933 = JCM 14209 (1) | | | | | | | | | | | +--Lactobacillus nasuensis JCM 17158 (1) | | | | | | | | | | | +--Lactobacillus ghanensis DSM 18630 (1) | | | | | | | | | | | +--Lactobacillus lindneri DSM 20690 = JCM 11027 (1) | | | | | | | | | | | +--Lactobacillus parafarraginis F0439 (1) | | | | | | | | | | | +--Lactobacillus manihotivorans DSM 13343 = JCM 12514 (1) | | | | | | | | | | | +--Lactobacillus coleohominis DSM 14060 (1) | | | | | | | | | | | +--Lactobacillus pontis DSM 8475 (1) | | | | | | | | | | | +--Lactobacillus equi DPC 6820 (1) | | | | | | | | | | | +--Lactobacillus farraginis DSM 18382 = JCM 14108 (1) | | | | | | | | | | | +--Lactobacillus apodemi DSM 16634 = JCM 16172 (1) | | | | | | | | | | | +--Lactobacillus oryzae JCM 18671 (1) | | | | | | | | | | | +--Lactobacillus zymae DSM 19395 (1) | | | | | | | | | | | +--Lactobacilluscoryniformis (1) | | | | | | | | | | | | | +--Lactobacillus coryniformis subsp. coryniformis CECT 5711 (1) | | | | | | | | | | | +--Lactobacillus harbinensis DSM 16991 (1) | | | | | | | | | | | +--Lactobacillus saniviri JCM 17471 = DSM 24301 (1) | | | | | | | | | | | +--Lactobacillus bifermentans DSM 20003 (1) | | | | | | | | | | | +--Lactobacillus tucceti DSM 20183 (1) | | | | | | | | | | | +--Lactobacillus camelliae DSM 22697 = JCM 13995 (1) | | | | | | | | | | | +--Lactobacillus thailandensis DSM 22698 = JCM 13996 (1) | | | | | | | | | | | +--Lactobacillus ceti DSM 22408 (1) | | | | | | | | | | | +--Lactobacillus fuchuensis DSM 14340 = JCM 11249 (1) | | | | | | | | | | | +--Lactobacillus sharpeae JCM 1186 = DSM 20505 (1) | | | | | | | | | | | +--Lactobacillus diolivorans DSM 14421 (1) | | | | | | | | | | | +--Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160 (2) | | | | | | | | | | | +--Lactobacillus shenzhenensis LY-73 (1) | | | | | | | | | | | +--Lactobacillus rennini DSM 20253 (1) | | | | | | | | | | | +--Lactobacillus dextrinicus DSM 20335 (1) | | | | | | | | | | | +--Lactobacillus panis DSM 6035 (1) | | | | | | | | | | | +--Lactobacillus mucosae LM1 (1) | | | | | | | | | | | +--Lactobacillus graminis DSM 20719 (1) | | | | | | | | | | | +--Lactobacillus senioris DSM 24302 = JCM 17472 (1) | | | | | | | | | | | +--Lactobacillus vini DSM 20605 (1) | | | | | | | | | +--Lactobacillus curieae (1) | | | | | | | | | +--Pediococcus (1) | | | | | | | | | | | +--Pediococcus claussenii ATCC BAA-344 (1) | | | | | | | | | +--Lactobacillus mellifer (1) | | | | | | | | | +--Lactobacillus mellis (1) | | | | | | | | | +--Lactobacillus allii (1) | | | | | | | +--Aerococcaceae (5) | | | | | | | +--Facklamia (4) | | | | | | | | | +--Facklamia languida CCUG 37842 (2) | | | | | | | | | +--Facklamia ignava CCUG 37419 (1) | | | | | | | | | +--Facklamia hominis CCUG 36813 (1) | | | | | | | +--Globicatella sp. HMSC072A10 (1) | | | | | +--Firmicutes bacterium CAG:791 (1) | | | | | +--Firmicutes bacterium CAG:129 (1) | | | | | +--Firmicutes bacterium CAG:102 (1) | | | | | +--Tissierellia (19) | | | | | +--Tissierellales (12) | | | | | | | +--Sporanaerobacter sp. PP17-6a (1) | | | | | | | +--Sporanaerobacter (2) | | | | | | | | | +--Sporanaerobacter acetigenes DSM 13106 (2) | | | | | | | +--Tissierellaceae (4) | | | | | | | | | +--Tissierella (4) | | | | | | | | | +--Tissierella creatinophila DSM 6911 (1) | | | | | | | | | +--Tissierella praeacuta DSM 18095 (3) | | | | | | | +--Peptoniphilaceae (5) | | | | | | | +--Peptoniphilus (1) | | | | | | | | | +--Peptoniphilus lacrimalis DNF00528 (1) | | | | | | | +--Peptoniphilus sp. ING2-D1G (1) | | | | | | | +--Anaerosphaera sp. HMSC064C01 (1) | | | | | | | +--Anaerosphaera (1) | | | | | | | | | +--Anaerosphaera aminiphila DSM 21120 (1) | | | | | | | +--Helcococcus (1) | | | | | | | +--Helcococcus kunzii ATCC 51366 (1) | | | | | +--unclassifiedTissierellia (7) | | | | | +--Tissierellia bacterium KA00581 (1) | | | | | +--Dethiosulfatibacter (2) | | | | | | | +--Dethiosulfatibacter aminovorans DSM 17477 (2) | | | | | +--Tissierellia bacterium S7-1-4 (2) | | | | | +--[Clostridium] ultunense Esp (1) | | | | | +--Tissierellia bacterium S5-A11 (1) | | | +--Haloplasmatales (1) | | | | | +--Haloplasmataceae (1) | | | | | +--Haloplasma contractile SSD-17B (1) | | | +--FCBgroup (2) | | | +--Bacteroidetes/Chlorobigroup (2) | | | +--Bacteroidetes (2) | | | +--Sphingobacteriia (1) | | | | | +--Sphingobacteriales (1) | | | | | +--Sphingobacteriaceae (1) | | | | | +--Sphingobacterium (1) | | | | | +--Sphingobacterium faecium PCAi_F2.5 (1) | | | +--Bacteroidia (1) | | | +--Bacteroidales (1) | | | +--Bacteroidaceae (1) | | | +--Bacteroides (1) | | | +--Bacteroides pectinophilus CAG:437 (1) | +--unclassified sequences (24)