# Species tree for RF01497 # Generated from Rfam version 14.10 | +--Eukaryota (28) | | | +--Alveolata (3) | | | | | +--Apicomplexa (3) | | | | | +--Aconoidasida (3) | | | | | +--Haemosporida (3) | | | | | +--Plasmodium (3) | | | | | +--Plasmodium yoelii yoelii (3) | | | +--Euglenozoa (1) | | | | | +--Kinetoplastida (1) | | | | | +--Trypanosomatidae (1) | | | | | +--Trypanosoma (1) | | | | | +--Trypanosoma congolense IL3000 (1) | | | +--Metazoa (13) | | | | | +--Nematoda (3) | | | | | | | +--Chromadorea (1) | | | | | | | | | +--Oxyurida (1) | | | | | | | | | +--Oxyuroidea (1) | | | | | | | | | +--Oxyuridae (1) | | | | | | | | | +--Enterobius vermicularis (1) | | | | | | | +--Enoplea (2) | | | | | | | +--Trichocephalida (2) | | | | | | | +--Trichuridae (2) | | | | | | | +--Trichuris trichiura (2) | | | | | +--Chordata (3) | | | | | | | +--Tunicata (1) | | | | | | | | | +--Ascidiacea (1) | | | | | | | | | +--Enterogona (1) | | | | | | | | | +--Phlebobranchia (1) | | | | | | | | | +--Cionidae (1) | | | | | | | | | +--Ciona savignyi (1) | | | | | | | +--Craniata (2) | | | | | | | +--Vertebrata (2) | | | | | | | +--Euteleostomi (2) | | | | | | | +--Archosauria (2) | | | | | | | +--Dinosauria (2) | | | | | | | +--Saurischia (2) | | | | | | | +--Theropoda (2) | | | | | | | +--Coelurosauria (2) | | | | | | | +--Aves (2) | | | | | | | +--Neognathae (2) | | | | | | | +--Sphenisciformes (2) | | | | | | | +--Spheniscidae (2) | | | | | | | +--Aptenodytes forsteri (emperor penguin) (2) | | | | | +--Arthropoda (7) | | | | | +--Hexapoda (6) | | | | | | | +--Insecta (6) | | | | | | | +--Pterygota (6) | | | | | | | +--Neoptera (6) | | | | | | | +--Endopterygota (6) | | | | | | | +--Coleoptera (1) | | | | | | | | | +--Polyphaga (1) | | | | | | | | | +--Cucujiformia (1) | | | | | | | | | +--Curculionidae (1) | | | | | | | | | +--Scolytinae (1) | | | | | | | | | +--Dendroctonus ponderosae (mountain pine beetle) (1) | | | | | | | +--Hymenoptera (2) | | | | | | | | | +--Apocrita (2) | | | | | | | | | +--Aculeata (2) | | | | | | | | | +--Vespoidea (2) | | | | | | | | | +--Formicidae (2) | | | | | | | | | +--Formicinae (2) | | | | | | | | | +--Lasius (2) | | | | | | | | | +--Lasius niger (2) | | | | | | | +--Diptera (3) | | | | | | | +--Nematocera (2) | | | | | | | | | +--Culicoidea (2) | | | | | | | | | +--Culicidae (2) | | | | | | | | | +--Culicinae (2) | | | | | | | | | +--Aedini (2) | | | | | | | | | +--Aedes (2) | | | | | | | | | +--Aedes aegypti (yellow fever mosquito) (2) | | | | | | | +--Brachycera (1) | | | | | | | +--Muscomorpha (1) | | | | | | | +--Ephydroidea (1) | | | | | | | +--Drosophilidae (1) | | | | | | | +--Drosophila (1) | | | | | | | +--Drosophila ficusphila (1) | | | | | +--Chelicerata (1) | | | | | +--Arachnida (1) | | | | | +--Acari (1) | | | | | +--Acariformes (1) | | | | | +--Sarcoptiformes (1) | | | | | +--Astigmata (1) | | | | | +--Psoroptidia (1) | | | | | +--Analgoidea (1) | | | | | +--Pyroglyphidae (1) | | | | | +--Pyroglyphinae (1) | | | | | +--Euroglyphus maynei (1) | | | +--Viridiplantae (10) | | | | | +--Streptophyta (10) | | | | | +--Embryophyta (9) | | | | | | | +--Tracheophyta (9) | | | | | | | +--Spermatophyta (9) | | | | | | | +--Magnoliophyta (9) | | | | | | | +--Liliopsida (2) | | | | | | | | | +--Poales (2) | | | | | | | | | +--Poaceae (2) | | | | | | | | | +--BEPclade (2) | | | | | | | | | +--Pooideae (2) | | | | | | | | | +--Triticeae (2) | | | | | | | | | +--Hordeum vulgare subsp. vulgare (domesticated barley) (1) | | | | | | | | | +--Triticum urartu (1) | | | | | | | +--eudicotyledons (7) | | | | | | | +--coreeudicotyledons (7) | | | | | | | +--Caryophyllales (3) | | | | | | | | | +--Amaranthaceae (3) | | | | | | | | | +--Spinacia oleracea (spinach) (2) | | | | | | | | | +--Beta vulgaris subsp. vulgaris (1) | | | | | | | +--rosids (4) | | | | | | | +--fabids (2) | | | | | | | | | +--Fabales (2) | | | | | | | | | +--Fabaceae (2) | | | | | | | | | +--Papilionoideae (2) | | | | | | | | | +--Phaseoleae (2) | | | | | | | | | +--Glycine soja (2) | | | | | | | +--malvids (2) | | | | | | | +--Malvales (2) | | | | | | | +--Malvaceae (2) | | | | | | | +--Grewioideae (2) | | | | | | | +--Corchorus capsularis (2) | | | | | +--Streptophytina (1) | | | | | +--Embryophyta (1) | | | | | +--Marchantiophyta (1) | | | | | +--Marchantiopsida (1) | | | | | +--Marchantiidae (1) | | | | | +--Marchantiales (1) | | | | | +--Marchantiaceae (1) | | | | | +--Marchantia (1) | | | | | +--Marchantia polymorpha subsp. ruderalis (1) | | | +--Opisthokonta (1) | | | +--Fungi (1) | | | +--Dikarya (1) | | | +--Ascomycota (1) | | | +--saccharomyceta (1) | | | +--Pezizomycotina (1) | | | +--leotiomyceta (1) | | | +--sordariomyceta (1) | | | +--Sordariomycetes (1) | | | +--Hypocreomycetidae (1) | | | +--Hypocreales (1) | | | +--Cordycipitaceae (1) | | | +--Beauveria (1) | | | +--Beauveria bassiana ARSEF 2860 (1) | +--Bacteria (1379) | | | +--Actinobacteria (187) | | | | | +--Actinobacteridae (187) | | | | | +--Actinomycetales (187) | | | | | +--Streptomycineae (8) | | | | | | | +--Streptomycetaceae (8) | | | | | | | +--Streptomyces atratus (1) | | | | | | | +--Streptomyces agglomeratus (2) | | | | | | | +--Streptomyces cyaneogriseus subsp. noncyanogenus (1) | | | | | | | +--Streptomyces flavogriseus ATCC 33331 (1) | | | | | | | +--Streptomyces sp. SPB74 (3) | | | | | +--Corynebacterineae (95) | | | | | | | +--Corynebacteriaceae (18) | | | | | | | | | +--Corynebacterium lipophiloflavum DSM 44291 (1) | | | | | | | | | +--Corynebacterium variabile DSM 44702 (1) | | | | | | | | | +--Corynebacterium jeikeium K411 (1) | | | | | | | | | +--Corynebacterium sp. CAU 212 (2) | | | | | | | | | +--Corynebacterium efficiens YS-314 (2) | | | | | | | | | +--Corynebacterium timonense (11) | | | | | | | +--Mycobacteriaceae (47) | | | | | | | | | +--Mycobacterium rhodesiae JS60 (2) | | | | | | | | | +--Mycobacterium parafortuitum (1) | | | | | | | | | +--Mycobacterium vanbaalenii PYR-1 (1) | | | | | | | | | +--Mycobacterium celatum (2) | | | | | | | | | +--Mycobacterium riyadhense (1) | | | | | | | | | +--Mycobacterium diernhoferi (1) | | | | | | | | | +--Mycobacterium doricum (1) | | | | | | | | | +--Mycobacterium insubricum (1) | | | | | | | | | +--Mycobacterium sherrisii (1) | | | | | | | | | +--Mycobacterium moriokaense (8) | | | | | | | | | +--Mycobacterium sp. KMS (3) | | | | | | | | | +--Mycobacterium conspicuum (1) | | | | | | | | | +--Mycobacterium thermoresistibile ATCC 19527 (2) | | | | | | | | | +--Mycobacterium palustre (1) | | | | | | | | | +--Mycobacterium kansasii (3) | | | | | | | | | +--Mycobacterium smegmatis str. MC2 155 (4) | | | | | | | | | +--Mycobacterium haemophilum (1) | | | | | | | | | +--Mycobacterium parmense (1) | | | | | | | | | +--Mycobacterium marinum M (1) | | | | | | | | | +--Mycobacterium chubuense NBB4 (4) | | | | | | | | | +--Mycobacterium rutilum (5) | | | | | | | | | +--Mycobacterium wolinskyi (1) | | | | | | | | | +--Mycobacterium obuense (1) | | | | | | | +--Nocardiaceae (3) | | | | | | | | | +--Rhodococcus erythropolis PR4 (1) | | | | | | | | | +--Rhodococcus kyotonensis (1) | | | | | | | | | +--Rhodococcus jostii RHA1 (1) | | | | | | | +--Segniliparaceae (1) | | | | | | | | | +--Segniliparus rotundus DSM 44985 (1) | | | | | | | +--Gordoniaceae (26) | | | | | | | +--Gordonia amarae NBRC 15530 (1) | | | | | | | +--Gordonia bronchialis DSM 43247 (25) | | | | | +--Micrococcineae (30) | | | | | | | +--Dermabacteraceae (1) | | | | | | | | | +--Brachybacterium nesterenkovii (1) | | | | | | | +--Micrococcaceae (5) | | | | | | | | | +--Zhihengliuella aestuarii (1) | | | | | | | | | +--Arthrobacter sp. SJCon (1) | | | | | | | | | +--Kocuria marina (3) | | | | | | | +--Microbacteriaceae (5) | | | | | | | | | +--Microbacterium esteraromaticum (2) | | | | | | | | | +--Microbacterium aurum (2) | | | | | | | | | +--Microbacterium chocolatum (1) | | | | | | | +--Dermacoccaceae (7) | | | | | | | | | +--Dermacoccus nishinomiyaensis (4) | | | | | | | | | +--Kytococcus sedentarius DSM 20547 (3) | | | | | | | +--Promicromonosporaceae (2) | | | | | | | | | +--Xylanimonas cellulosilytica DSM 15894 (2) | | | | | | | +--Intrasporangiaceae (4) | | | | | | | | | +--Serinicoccus chungangensis (1) | | | | | | | | | +--Intrasporangium calvum DSM 43043 (2) | | | | | | | | | +--Janibacter sp. 0704P10-1 (1) | | | | | | | +--Brevibacteriaceae (3) | | | | | | | | | +--Brevibacterium sp. 01-Je-003 (2) | | | | | | | | | +--Brevibacterium linens (1) | | | | | | | +--Cellulomonadaceae (3) | | | | | | | +--[Cellvibrio] gilvus ATCC 13127 (1) | | | | | | | +--Cellulomonas sp. Mn5-4 (1) | | | | | | | +--Cellulomonas sp. T26 (1) | | | | | +--Micromonosporineae (4) | | | | | | | +--Micromonosporaceae (4) | | | | | | | +--Micromonospora sp. 211018 (1) | | | | | | | +--Micromonospora sp. CR30 (1) | | | | | | | +--Micromonospora echinaurantiaca (1) | | | | | | | +--Micromonospora rosaria (1) | | | | | +--Propionibacterineae (19) | | | | | | | +--Nocardioidaceae (10) | | | | | | | | | +--Nocardioides sp. CF8 (2) | | | | | | | | | +--Nocardioides sp. JS614 (8) | | | | | | | +--Propionibacteriaceae (9) | | | | | | | +--Tessaracoccus flavescens (1) | | | | | | | +--Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 (6) | | | | | | | +--Microlunatus phosphovorus NM-1 (2) | | | | | +--Pseudonocardineae (5) | | | | | | | +--Pseudonocardiaceae (5) | | | | | | | +--Saccharopolyspora erythraea NRRL 2338 (1) | | | | | | | +--Kibdelosporangium sp. KLBMP 1111 (3) | | | | | | | +--Kibdelosporangium aridum (1) | | | | | +--Actinomycineae (3) | | | | | | | +--Actinomycetaceae (3) | | | | | | | +--Actinomyces sp. oral taxon 178 str. F0338 (1) | | | | | | | +--Actinomyces nasicola (1) | | | | | | | +--Actinomyces denticolens (1) | | | | | +--Frankineae (23) | | | | | +--Nakamurellaceae (16) | | | | | | | +--Nakamurella multipartita DSM 44233 (5) | | | | | | | +--Nakamurella sp. P4-7 (11) | | | | | +--Frankiaceae (1) | | | | | | | +--Frankia sp. EUN1f (1) | | | | | +--Geodermatophilaceae (5) | | | | | | | +--Modestobacter sp. 42H12-1 (4) | | | | | | | +--Geodermatophilus obscurus DSM 43160 (1) | | | | | +--Cryptosporangiaceae (1) | | | | | +--Cryptosporangium aurantiacum (1) | | | +--unclassifiedBacteria (2) | | | | | +--Bacteriacandidatephyla (2) | | | | | +--candidate division Hyd24-12 bacterium Vib_1 (1) | | | | | +--Candidatus Eisenbacteria bacterium RBG_16_71_46 (1) | | | +--Proteobacteria (986) | | | | | +--Thiobacillus prosperus (1) | | | | | +--Alphaproteobacteria (474) | | | | | | | +--Rhizobiales bacterium WSM3557 (4) | | | | | | | +--Rhodospirillales (71) | | | | | | | | | +--unclassifiedRhodospirillales (1) | | | | | | | | | | | +--Rhodospirillales bacterium 69-11 (1) | | | | | | | | | +--Acetobacteraceae (46) | | | | | | | | | | | +--Acetobacter (6) | | | | | | | | | | | | | +--Acetobacter orientalis 21F-2 (1) | | | | | | | | | | | | | +--Acetobacter indonesiensis 5H-1 (3) | | | | | | | | | | | | | +--Acetobacter aceti NBRC 14818 (1) | | | | | | | | | | | | | +--Acetobacter syzygii 9H-2 (1) | | | | | | | | | | | +--Komagataeibacter (3) | | | | | | | | | | | | | +--Komagataeibacter xylinus E25 (3) | | | | | | | | | | | +--Roseomonas cervicalis ATCC 49957 (1) | | | | | | | | | | | +--Acidocella sp. MX-AZ02 (1) | | | | | | | | | | | +--Gluconacetobacter xylinus NBRC 3288 (1) | | | | | | | | | | | +--Gluconacetobacter diazotrophicus PAl 5 (4) | | | | | | | | | | | +--Acetobacter persici (1) | | | | | | | | | | | +--Acidocella (2) | | | | | | | | | | | | | +--Acidocella aminolytica 101 = DSM 11237 (2) | | | | | | | | | | | +--Gluconobacter (1) | | | | | | | | | | | | | +--Gluconobacter oxydans H24 (1) | | | | | | | | | | | +--Kozakia baliensis (1) | | | | | | | | | | | +--Acidisphaera (2) | | | | | | | | | | | | | +--Acidisphaera rubrifaciens HS-AP3 (2) | | | | | | | | | | | +--Gluconobacter oxydans 621H (3) | | | | | | | | | | | +--Gluconacetobacter sp. SXCC-1 (1) | | | | | | | | | | | +--Acetobacter tropicalis NBRC 101654 (1) | | | | | | | | | | | +--Acetobacter pasteurianus IFO 3283-01 (10) | | | | | | | | | | | +--Acidomonas (1) | | | | | | | | | | | | | +--Acidomonas methanolica NBRC 104435 (1) | | | | | | | | | | | +--Acidiphilium cryptum JF-5 (1) | | | | | | | | | | | +--Asaia (1) | | | | | | | | | | | | | +--Asaia platycodi SF2.1 (1) | | | | | | | | | | | +--Gluconacetobacter nataicola (5) | | | | | | | | | +--Rhodospirillaceae (24) | | | | | | | | | +--Azospirillum lipoferum (1) | | | | | | | | | +--Caenispirillum (1) | | | | | | | | | | | +--Caenispirillum salinarum AK4 (1) | | | | | | | | | +--Azospirillum sp. B510 (6) | | | | | | | | | +--Rhodospirillaceae bacterium BRH_c57 (1) | | | | | | | | | +--Azospirillum lipoferum 4B (8) | | | | | | | | | +--Elstera litoralis (2) | | | | | | | | | +--Skermanella (5) | | | | | | | | | +--Skermanella aerolata KACC 11604 (3) | | | | | | | | | +--Skermanella stibiiresistens SB22 (2) | | | | | | | +--Sphingomonadales (77) | | | | | | | | | +--Erythrobacteraceae (4) | | | | | | | | | | | +--Erythrobacter sp. SCN 62-14 (1) | | | | | | | | | | | +--Erythrobacter sp. SD-21 (1) | | | | | | | | | | | +--Erythrobacter sp. AP23 (1) | | | | | | | | | | | +--Croceicoccus naphthovorans (1) | | | | | | | | | +--Sphingomonadaceae (71) | | | | | | | | | | | +--Sphingopyxis sp. LC363 (1) | | | | | | | | | | | +--Novosphingobium sp. Leaf2 (2) | | | | | | | | | | | +--Sphingopyxis granuli (1) | | | | | | | | | | | +--Novosphingobium sp. ST904 (1) | | | | | | | | | | | +--Novosphingobium sp. LE124 (1) | | | | | | | | | | | +--Sphingobium sp. TCM1 (3) | | | | | | | | | | | +--Novosphingobium sp. SCN 66-18 (1) | | | | | | | | | | | +--Sphingomonas sp. Leaf339 (1) | | | | | | | | | | | +--Sphingomonas sp. Ag1 (2) | | | | | | | | | | | +--Sphingomonas (3) | | | | | | | | | | | | | +--Sphingomonas sanxanigenens DSM 19645 = NX02 (3) | | | | | | | | | | | +--Novosphingobium barchaimii (1) | | | | | | | | | | | +--Novosphingobium malaysiense (1) | | | | | | | | | | | +--Sphingomonas sp. Root720 (1) | | | | | | | | | | | +--Novosphingobium nitrogenifigens DSM 19370 (1) | | | | | | | | | | | +--Sphingomonas sp. Leaf34 (1) | | | | | | | | | | | +--Sphingopyxis sp. BZ30 (1) | | | | | | | | | | | +--Sphingobium baderi (1) | | | | | | | | | | | +--Sphingobium sp. SYK-6 (2) | | | | | | | | | | | +--Sphingomonas sp. SKA58 (1) | | | | | | | | | | | +--Sphingomonas sp. TDK1 (2) | | | | | | | | | | | +--Novosphingobium sp. AAP1 (2) | | | | | | | | | | | +--Sphingomonas sp. Leaf343 (1) | | | | | | | | | | | +--Sphingomonas sp. WG (2) | | | | | | | | | | | +--Sphingobium chungbukense (1) | | | | | | | | | | | +--Novosphingobium sp. AAP93 (3) | | | | | | | | | | | +--Sphingomonas koreensis (2) | | | | | | | | | | | +--Novosphingobium sp. MBES04 (1) | | | | | | | | | | | +--Sphingomonas sp. MCT13 (2) | | | | | | | | | | | +--Sphingobium sp. MI1205 (1) | | | | | | | | | | | +--Sphingomonas sp. LNB2 (2) | | | | | | | | | | | +--Sphingomonas sp. 67-36 (1) | | | | | | | | | | | +--Sphingomonas hengshuiensis (1) | | | | | | | | | | | +--Sphingobium sp. TKS (2) | | | | | | | | | | | +--Sphingomonas sp. Ant20 (5) | | | | | | | | | | | +--Novosphingobium sp. Rr 2-17 (2) | | | | | | | | | | | +--Sphingopyxis witflariensis (2) | | | | | | | | | | | +--Novosphingobium subterraneum (1) | | | | | | | | | | | +--Sphingobium sp. Ant17 (4) | | | | | | | | | | | +--Sphingopyxis sp. 113P3 (1) | | | | | | | | | | | +--Sphingobium (6) | | | | | | | | | | | | | +--Sphingobium czechense LL01 (2) | | | | | | | | | | | | | +--Sphingobium japonicum BiD32 (3) | | | | | | | | | | | | | +--Sphingobium ummariense RL-3 (1) | | | | | | | | | | | +--Novosphingobium sp. P6W (1) | | | | | | | | | +--Sphingomonadales bacterium GWF1_63_6 (2) | | | | | | | +--Sneathiellales (1) | | | | | | | | | +--Sneathiellaceae (1) | | | | | | | | | +--Sneathiella sp. BFLP-8 (1) | | | | | | | +--unclassifiedAlphaproteobacteria (4) | | | | | | | | | +--Alphaproteobacteria bacterium MedPE-SWcel (2) | | | | | | | | | +--Alphaproteobacteria bacterium BRH_c36 (1) | | | | | | | | | +--alpha proteobacterium Q-1 (1) | | | | | | | +--Rhizobiales (122) | | | | | | | | | +--Brucellaceae (1) | | | | | | | | | | | +--Ochrobactrum (1) | | | | | | | | | | | +--Ochrobactrum intermedium 229E (1) | | | | | | | | | +--Methylocystaceae (2) | | | | | | | | | | | +--Methylosinus sp. 3S-1 (1) | | | | | | | | | | | +--Methylosinus sp. R-45379 (1) | | | | | | | | | +--Aurantimonadaceae (18) | | | | | | | | | | | +--Aurantimonas manganoxydans SI85-9A1 (2) | | | | | | | | | | | +--Martelella sp. AD-3 (4) | | | | | | | | | | | +--Aurantimonas sp. USBA 369 (1) | | | | | | | | | | | +--Aurantimonas ureilytica (2) | | | | | | | | | | | +--Martelella endophytica (1) | | | | | | | | | | | +--Aurantimonas sp. 22II-16-19i (5) | | | | | | | | | | | +--Aureimonas sp. Leaf460 (1) | | | | | | | | | | | +--Fulvimarina pelagi HTCC2506 (1) | | | | | | | | | | | +--Martelella (1) | | | | | | | | | | | +--Martelella mediterranea DSM 17316 (1) | | | | | | | | | +--Phyllobacteriaceae (14) | | | | | | | | | | | +--Nitratireductor (1) | | | | | | | | | | | | | +--Nitratireductor indicus C115 (1) | | | | | | | | | | | +--Mesorhizobium sp. L48C026A00 (1) | | | | | | | | | | | +--Mesorhizobium loti (1) | | | | | | | | | | | +--Mesorhizobium australicum (1) | | | | | | | | | | | +--Hoeflea sp. BRH_c9 (2) | | | | | | | | | | | +--Mesorhizobium sp. B7 (5) | | | | | | | | | | | +--Mesorhizobium sp. UASWS1009 (1) | | | | | | | | | | | +--Mesorhizobium (1) | | | | | | | | | | | | | +--Mesorhizobium alhagi CCNWXJ12-2 (1) | | | | | | | | | | | +--Mesorhizobium ciceri biovar biserrulae WSM1271 (1) | | | | | | | | | +--unclassifiedRhizobiales (2) | | | | | | | | | | | +--Rhizobiales bacterium 65-9 (2) | | | | | | | | | +--Hyphomicrobiaceae (13) | | | | | | | | | | | +--Prosthecomicrobium enhydrum (1) | | | | | | | | | | | +--Devosia sp. Cr7-05 (2) | | | | | | | | | | | +--Blastochloris viridis (5) | | | | | | | | | | | +--Devosia sp. S37 (2) | | | | | | | | | | | +--Hyphomicrobium sp. SCN 65-11 (1) | | | | | | | | | | | +--Pelagibacterium sp. SCN 63-23 (2) | | | | | | | | | +--Xanthobacteraceae (1) | | | | | | | | | | | +--Azorhizobium caulinodans ORS 571 (1) | | | | | | | | | +--Rhizobiaceae (28) | | | | | | | | | | | +--Shinella sp. HZN7 (1) | | | | | | | | | | | +--Kaistia sp. SCN 65-12 (2) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (24) | | | | | | | | | | | | | +--Rhizobium sp. Leaf306 (1) | | | | | | | | | | | | | +--Rhizobium sp. Root482 (2) | | | | | | | | | | | | | +--Rhizobium lusitanum (1) | | | | | | | | | | | | | +--Rhizobium sp. RU36D (2) | | | | | | | | | | | | | +--Rhizobium sp. Root149 (1) | | | | | | | | | | | | | +--Rhizobium sp. NT-26 (3) | | | | | | | | | | | | | +--Rhizobium (1) | | | | | | | | | | | | | | | +--Rhizobium freirei PRF 81 (1) | | | | | | | | | | | | | +--Rhizobium oryzae (2) | | | | | | | | | | | | | +--Rhizobium rhizosphaerae (1) | | | | | | | | | | | | | +--Agrobacterium sp. DSM 25559 (1) | | | | | | | | | | | | | +--Rhizobium oryziradicis (2) | | | | | | | | | | | | | +--Rhizobium sp. Leaf371 (1) | | | | | | | | | | | | | +--Agrobacterium vitis S4 (3) | | | | | | | | | | | | | +--Pararhizobium polonicum (1) | | | | | | | | | | | | | +--Rhizobium sp. Root1212 (1) | | | | | | | | | | | | | +--Rhizobium sp. PDO1-076 (1) | | | | | | | | | | | +--Sinorhizobium/Ensifergroup (1) | | | | | | | | | | | +--Sinorhizobium saheli (1) | | | | | | | | | +--Methylobacteriaceae (18) | | | | | | | | | | | +--Methylobacterium radiotolerans JCM 2831 (2) | | | | | | | | | | | +--Methylobacterium sp. Leaf456 (1) | | | | | | | | | | | +--Methylobacterium sp. 4-46 (2) | | | | | | | | | | | +--Microvirga vignae (2) | | | | | | | | | | | +--Methylobacterium nodulans ORS 2060 (1) | | | | | | | | | | | +--Methylobacterium extorquens AM1 (1) | | | | | | | | | | | +--Microvirga ossetica (3) | | | | | | | | | | | +--Methylobacterium tarhaniae (3) | | | | | | | | | | | +--Methylobacterium indicum (3) | | | | | | | | | +--Bradyrhizobiaceae (24) | | | | | | | | | | | +--Bosea sp. TND4EK4 (2) | | | | | | | | | | | +--Bosea thiooxidans (1) | | | | | | | | | | | +--Bosea sp. Root381 (1) | | | | | | | | | | | +--Nitrobacter winogradskyi Nb-255 (2) | | | | | | | | | | | +--Bradyrhizobium sp. LTSP849 (1) | | | | | | | | | | | +--Rhodopseudomonas palustris BisB18 (1) | | | | | | | | | | | +--Bosea sp. Leaf344 (1) | | | | | | | | | | | +--Bradyrhizobium sp. AS23.2 (2) | | | | | | | | | | | +--Bosea sp. WAO (1) | | | | | | | | | | | +--Nitrobacter sp. Nb-311A (10) | | | | | | | | | | | +--Bradyrhizobium sp. NAS80.1 (1) | | | | | | | | | | | +--Nitrobacter hamburgensis X14 (1) | | | | | | | | | +--Phyllobacteriaceae bacterium AMV1 (1) | | | | | | | +--Caulobacterales (1) | | | | | | | | | +--Caulobacteraceae (1) | | | | | | | | | +--Asticcacaulis sp. AC466 (1) | | | | | | | +--Kordiimonadales (1) | | | | | | | | | +--Kordiimonas sp. S3-22 (1) | | | | | | | +--Rhodobacterales (193) | | | | | | | +--Rhodobacteraceae bacterium SH6-1 (1) | | | | | | | +--Hyphomonadaceae (2) | | | | | | | | | +--Hyphomonas neptunium ATCC 15444 (2) | | | | | | | +--Rhodobacterales bacterium RIFCSPHIGHO2_02_FULL_62_130 (3) | | | | | | | +--Rhodobacteraceae (187) | | | | | | | +--Celeribacter (1) | | | | | | | | | +--Celeribacter baekdonensis B30 (1) | | | | | | | +--Marinosulfonomonas sp. PRT-SC04 (2) | | | | | | | +--Silicibacter lacuscaerulensis ITI-1157 (3) | | | | | | | +--Thioclava indica (1) | | | | | | | +--Roseisalinus antarcticus (2) | | | | | | | +--Sulfitobacter mediterraneus (1) | | | | | | | +--Loktanella vestfoldensis (4) | | | | | | | +--Thiobacimonas profunda (2) | | | | | | | +--Litoreibacter (2) | | | | | | | | | +--Litoreibacter arenae DSM 19593 (2) | | | | | | | +--Oceanicola batsensis HTCC2597 (1) | | | | | | | +--Roseovarius (1) | | | | | | | | | +--Roseovarius mucosus DSM 17069 (1) | | | | | | | +--Thioclava sp. SK-1 (10) | | | | | | | +--Rhodovulum sulfidophilum (26) | | | | | | | +--Roseovarius pacificus (1) | | | | | | | +--Paracoccus solventivorans (2) | | | | | | | +--Paracoccus halophilus (3) | | | | | | | +--Loktanella sp. 3ANDIMAR09 (1) | | | | | | | +--Marivita cryptomonadis (2) | | | | | | | +--Candidatus Rhodobacter lobularis (1) | | | | | | | +--Jannaschia seosinensis (3) | | | | | | | +--Leisingera (2) | | | | | | | | | +--Leisingera methylohalidivorans DSM 14336 (2) | | | | | | | +--Roseovarius sp. A-2 (2) | | | | | | | +--Ruegeria sp. ANG-R (1) | | | | | | | +--Sulfitobacter geojensis (1) | | | | | | | +--Antarctobacter sp. JLT354-W (1) | | | | | | | +--Rhodobacteraceae bacterium HLUCCA09 (1) | | | | | | | +--Roseovarius azorensis (1) | | | | | | | +--Paracoccus sediminis (1) | | | | | | | +--Roseivivax (2) | | | | | | | | | +--Roseivivax halodurans JCM 10272 (2) | | | | | | | +--Celeribacter indicus (15) | | | | | | | +--Paracoccus sp. J56 (1) | | | | | | | +--Jannaschia sp. GSW-M26 (1) | | | | | | | +--Loktanella atrilutea (1) | | | | | | | +--Rhodobacter sp. SW2 (2) | | | | | | | +--Paracoccus denitrificans PD1222 (5) | | | | | | | +--Rhodobacter vinaykumarii (1) | | | | | | | +--Rhodobacter sp. BACL10 MAG-120910-bin24 (1) | | | | | | | +--Thalassiobium sp. R2A62 (5) | | | | | | | +--Pelagicola litorisediminis (1) | | | | | | | +--Paracoccus halotolerans (1) | | | | | | | +--Rhodobacter aestuarii (1) | | | | | | | +--Citreicella sp. SE45 (2) | | | | | | | +--Maliponia aquimaris (1) | | | | | | | +--Marinovum (1) | | | | | | | | | +--Marinovum algicola DG 898 (1) | | | | | | | +--Paracoccus sp. SM22M-07 (3) | | | | | | | +--Pelagibaca bermudensis HTCC2601 (2) | | | | | | | +--Palleronia marisminoris (2) | | | | | | | +--Halocynthiibacter arcticus (2) | | | | | | | +--Oceanibulbus sp. HI0023 (2) | | | | | | | +--Defluviimonas sp. 20V17 (1) | | | | | | | +--Loktanella soesokkakensis (1) | | | | | | | +--Labrenzia sp. OB1 (4) | | | | | | | +--Loktanella vestfoldensis SKA53 (1) | | | | | | | +--Roseobacter sp. GAI101 (1) | | | | | | | +--Pseudoruegeria sp. ZXM137 (2) | | | | | | | +--Roseovarius sp. NH52J (1) | | | | | | | +--Pseudopelagicola gijangensis (3) | | | | | | | +--Sulfitobacter sp. EE-36 (1) | | | | | | | +--Dinoroseobacter shibae DFL 12 (2) | | | | | | | +--Pseudorhodobacter sp. ZS3-33 (2) | | | | | | | +--Citreicella sp. 357 (2) | | | | | | | +--Octadecabacter antarcticus 238 (1) | | | | | | | +--Oceanicola granulosus HTCC2516 (1) | | | | | | | +--Pseudoruegeria sp. SK021 (2) | | | | | | | +--Roseovarius sp. TM1035 (1) | | | | | | | +--Octadecabacter antarcticus 307 (16) | | | | | | | +--Tropicibacter naphthalenivorans (1) | | | | | | | +--Rhodobacteraceae bacterium GWF1_65_7 (1) | | | | | | | +--Oceanicola marinus (1) | | | | | | | +--Wenxinia (1) | | | | | | | | | +--Wenxinia marina DSM 24838 (1) | | | | | | | +--Roseobacter sp. AzwK-3b (2) | | | | | | | +--Loktanella (1) | | | | | | | | | +--Loktanella hongkongensis DSM 17492 (1) | | | | | | | +--Ruegeria pomeroyi DSS-3 (1) | | | | | | | +--Tropicibacter sp. CECT 7557 (1) | | | | | | | +--Paracoccus seriniphilus (1) | | | | | | | +--Ruegeria sp. ZGT118 (1) | | | | | | | +--Stappia sp. 22II-S9-Z10 (1) | | | | | | | +--Stappia sp. ES.058 (1) | | | | | | | +--Roseovarius crassostreae (1) | | | | | +--Gammaproteobacteria (219) | | | | | | | +--unclassifiedGammaproteobacteria (33) | | | | | | | | | +--Competibacteraceae (4) | | | | | | | | | | | +--CandidatusCompetibacter (1) | | | | | | | | | | | | | +--Candidatus Competibacter denitrificans Run_A_D11 (1) | | | | | | | | | | | +--CandidatusContendobacter (3) | | | | | | | | | | | +--Candidatus Contendobacter odensis Run_B_J11 (3) | | | | | | | | | +--Gammaproteobacteria bacterium SG8_47 (1) | | | | | | | | | +--endosymbiont of unidentified scaly snail isolate Monju (28) | | | | | | | +--Enterobacterales (2) | | | | | | | | | +--Enterobacteriaceae (2) | | | | | | | | | +--Escherichia (1) | | | | | | | | | | | +--Escherichia coli ISC11 (1) | | | | | | | | | +--Izhakiella australiensis (1) | | | | | | | +--Methylococcales (12) | | | | | | | | | +--Methylococcaceae (11) | | | | | | | | | | | +--Methylococcus capsulatus str. Bath (3) | | | | | | | | | | | +--Methylomonas methanica MC09 (4) | | | | | | | | | | | +--Methylomicrobium album BG8 (2) | | | | | | | | | | | +--Methylomonas denitrificans (2) | | | | | | | | | +--Methylococcaceae bacterium KoM1 (1) | | | | | | | +--Immundisolibacterales (5) | | | | | | | | | +--Immundisolibacteraceae (5) | | | | | | | | | +--Immundisolibacter cernigliae (5) | | | | | | | +--Alteromonadales (7) | | | | | | | | | +--Pseudoalteromonadaceae (5) | | | | | | | | | | | +--Pseudoalteromonas (3) | | | | | | | | | | | | | +--Pseudoalteromonas lipolytica SCSIO 04301 (3) | | | | | | | | | | | +--Pseudoalteromonas sp. P1-25 (1) | | | | | | | | | | | +--Pseudoalteromonas sp. A601 (1) | | | | | | | | | +--Idiomarinaceae (1) | | | | | | | | | | | +--Idiomarina sp. 10-D-4 (1) | | | | | | | | | +--Alteromonadaceae (1) | | | | | | | | | +--Catenovulum (1) | | | | | | | | | +--Catenovulum agarivorans DS-2 (1) | | | | | | | +--Salinisphaerales (2) | | | | | | | | | +--Salinisphaeraceae (2) | | | | | | | | | +--Salinisphaera shabanensis E1L3A (1) | | | | | | | | | +--Salinisphaera (1) | | | | | | | | | +--Salinisphaera hydrothermalis C41B8 (1) | | | | | | | +--Cellvibrionales (1) | | | | | | | | | +--Spongiibacteraceae (1) | | | | | | | | | +--gamma proteobacterium BDW918 (1) | | | | | | | +--Xanthomonadales (25) | | | | | | | | | +--Xanthomonadales bacterium 63-13 (2) | | | | | | | | | +--Rhodanobacteraceae (1) | | | | | | | | | | | +--Dokdonella (1) | | | | | | | | | | | +--Dokdonella koreensis DS-123 (1) | | | | | | | | | +--Xanthomonadaceae (22) | | | | | | | | | +--Xanthomonas translucens pv. undulosa (4) | | | | | | | | | +--Arenimonas (2) | | | | | | | | | | | +--Arenimonas malthae CC-JY-1 (1) | | | | | | | | | | | +--Arenimonas metalli CF5-1 (1) | | | | | | | | | +--Pseudoxanthomonas spadix BD-a59 (1) | | | | | | | | | +--Luteimonas sp. FCS-9 (1) | | | | | | | | | +--Stenotrophomonas sp. BIIR7 (1) | | | | | | | | | +--Xanthomonas fragariae (2) | | | | | | | | | +--Xanthomonas axonopodis pv. citri str. 306 (1) | | | | | | | | | +--Xanthomonas (6) | | | | | | | | | | | +--Xanthomonas albilineans GPE PC73 (6) | | | | | | | | | +--unclassifiedXanthomonadaceae (1) | | | | | | | | | | | +--Xanthomonadaceae bacterium SCN 69-320 (1) | | | | | | | | | +--Xanthomonas oryzae pv. oryzae KACC10331 (3) | | | | | | | +--Enterobacteriales (25) | | | | | | | | | +--Enterobacteriaceae (25) | | | | | | | | | +--Escherichia coli CFT073 (1) | | | | | | | | | +--Shigella boydii Sb227 (2) | | | | | | | | | +--Escherichia coli 101-1 (1) | | | | | | | | | +--Escherichia coli (1) | | | | | | | | | +--Escherichia coli B7A (1) | | | | | | | | | +--Edwardsiella ictaluri 93-146 (1) | | | | | | | | | +--Sodalis glossinidius str. 'morsitans' (1) | | | | | | | | | +--Serratia (3) | | | | | | | | | | | +--Serratia symbiotica str. Tucson (3) | | | | | | | | | +--Escherichia coli SE11 (1) | | | | | | | | | +--Sodalis glossinidius (2) | | | | | | | | | +--Serratia symbiotica (4) | | | | | | | | | +--Shigella dysenteriae Sd197 (5) | | | | | | | | | +--Yersinia sp. M24tronco3 (2) | | | | | | | +--Chromatiales (13) | | | | | | | | | +--Ectothiorhodospiraceae (3) | | | | | | | | | | | +--Oceanococcus atlanticus (1) | | | | | | | | | | | +--Thioalkalivibrio denitrificans (1) | | | | | | | | | | | +--Thioalkalivibrio (1) | | | | | | | | | | | +--Thioalkalivibrio nitratireducens DSM 14787 (1) | | | | | | | | | +--Chromatiaceae (9) | | | | | | | | | | | +--Candidatus Tenderia electrophaga (1) | | | | | | | | | | | +--Thiocystis violascens DSM 198 (3) | | | | | | | | | | | +--Allochromatium vinosum DSM 180 (1) | | | | | | | | | | | +--Thioflavicoccus (4) | | | | | | | | | | | +--Thioflavicoccus mobilis 8321 (4) | | | | | | | | | +--Woeseiaceae (1) | | | | | | | | | +--Woeseia oceani (1) | | | | | | | +--Acidithiobacillales (4) | | | | | | | | | +--Acidithiobacillaceae (4) | | | | | | | | | +--Acidithiobacillus ferrooxidans ATCC 23270 (1) | | | | | | | | | +--Acidithiobacillus caldus SM-1 (2) | | | | | | | | | +--Acidithiobacillus sp. GGI-221 (1) | | | | | | | +--Oceanospirillales (6) | | | | | | | | | +--Halomonadaceae (5) | | | | | | | | | | | +--Halomonas meridiana (2) | | | | | | | | | | | +--Halomonas sp. QHL1 (1) | | | | | | | | | | | +--Halomonas (1) | | | | | | | | | | | | | +--Halomonas desiderata SP1 (1) | | | | | | | | | | | +--Halomonas sp. PBN3 (1) | | | | | | | | | +--Alcanivoracaceae (1) | | | | | | | | | +--Alcanivorax (1) | | | | | | | | | +--Alcanivorax dieselolei B5 (1) | | | | | | | +--Pseudomonadales (84) | | | | | | | +--unclassifiedPseudomonadales (2) | | | | | | | | | +--Pseudomonadales bacterium GWC1_66_9 (1) | | | | | | | | | +--Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210 (1) | | | | | | | +--Pseudomonadaceae (21) | | | | | | | | | +--Pseudomonas sp. Chol1 (1) | | | | | | | | | +--Pseudomonas sp. VI4.1 (1) | | | | | | | | | +--Pseudomonas sp. HPB0071 (1) | | | | | | | | | +--Pseudomonas sp. BZ93 (4) | | | | | | | | | +--Pseudomonas sp. EGD-AK9 (1) | | | | | | | | | +--Pseudomonas sp. BAY1663 (1) | | | | | | | | | +--Pseudomonas putida KT2440 (1) | | | | | | | | | +--Pseudomonas sp. BRH_c35 (1) | | | | | | | | | +--Pseudomonas sp. 21C1 (1) | | | | | | | | | +--Pseudomonas (9) | | | | | | | | | +--Pseudomonassyringaegroup (2) | | | | | | | | | | | +--Pseudomonas cichorii JBC1 (2) | | | | | | | | | +--Pseudomonasstutzerigroup (3) | | | | | | | | | | | +--Pseudomonas balearica DSM 6083 (3) | | | | | | | | | +--Pseudomonasaeruginosagroup (1) | | | | | | | | | | | +--Pseudomonasoleovorans/pseudoalcaligenesgroup (1) | | | | | | | | | | | +--Pseudomonas pseudoalcaligenes KF707 = NBRC 110670 (1) | | | | | | | | | +--Pseudomonas knackmussii B13 (1) | | | | | | | | | +--Pseudomonas syringae pv. phaseolicola 1448A (1) | | | | | | | | | +--Pseudomonas syringae pv. spinaceae (1) | | | | | | | +--Moraxellaceae (61) | | | | | | | +--Enhydrobacter aerosaccus (2) | | | | | | | +--Acinetobacter sp. CIP 102637 (2) | | | | | | | +--Acinetobacter johnsonii SH046 (1) | | | | | | | +--Acinetobacter sp. TTH0-4 (8) | | | | | | | +--Acinetobacter towneri (7) | | | | | | | +--Acinetobacter sp. SFC (1) | | | | | | | +--Acinetobacter (17) | | | | | | | | | +--Acinetobacter gerneri DSM 14967 = CIP 107464 (4) | | | | | | | | | +--Acinetobacter haemolyticus CIP 64.3 (10) | | | | | | | | | +--Acinetobacter tandoii DSM 14970 = CIP 107469 (1) | | | | | | | | | +--Acinetobacter guillouiae CIP 63.46 (2) | | | | | | | +--Acinetobacter sp. Ver3 (6) | | | | | | | +--Moraxella atlantae (3) | | | | | | | +--Enhydrobacter aerosaccus SK60 (3) | | | | | | | +--Acinetobacter larvae (3) | | | | | | | +--Acinetobacter populi (1) | | | | | | | +--Psychrobacter arcticus 273-4 (4) | | | | | | | +--Acinetobacter radioresistens SK82 (1) | | | | | | | +--Acinetobacter sp. ANC 3832 (1) | | | | | | | +--Acinetobacter sp. NCu2D-2 (1) | | | | | +--alpha proteobacterium BAL199 (4) | | | | | +--Betaproteobacteria (275) | | | | | | | +--unclassifiedBetaproteobacteria (1) | | | | | | | | | +--Betaproteobacteria bacterium MOLA814 (1) | | | | | | | +--Burkholderiales (192) | | | | | | | | | +--Thiomonas sp. S10 (2) | | | | | | | | | +--Alcaligenaceae (16) | | | | | | | | | | | +--Bordetella genomosp. 9 (1) | | | | | | | | | | | +--Castellaniella (1) | | | | | | | | | | | | | +--Castellaniella defragrans 65Phen (1) | | | | | | | | | | | +--Pusillimonas sp. T7-7 (1) | | | | | | | | | | | +--Bordetella sp. AU10664 (1) | | | | | | | | | | | +--Bordetella ansorpii (3) | | | | | | | | | | | +--Achromobacter sp. DMS1 (4) | | | | | | | | | | | +--Alcaligenes faecalis (1) | | | | | | | | | | | +--Bordetella sp. AU7206 (1) | | | | | | | | | | | +--Bordetella petrii (3) | | | | | | | | | +--Roseateles aquatilis (1) | | | | | | | | | +--Tepidimonas sp. AT-A2 (1) | | | | | | | | | +--unclassifiedBurkholderiales (6) | | | | | | | | | | | +--BurkholderialesGeneraincertaesedis (3) | | | | | | | | | | | | | +--Rhizobacter sp. Root29 (2) | | | | | | | | | | | | | +--Rubrivivax sp. SCN 70-15 (1) | | | | | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_12_FULL_65_40 (1) | | | | | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_99 (1) | | | | | | | | | | | +--Burkholderiales bacterium 70-64 (1) | | | | | | | | | +--Oxalobacteraceae (11) | | | | | | | | | | | +--Massilia sp. JS1662 (1) | | | | | | | | | | | +--Massilia sp. KIM (1) | | | | | | | | | | | +--Massilia sp. WF1 (1) | | | | | | | | | | | +--Duganella sp. Leaf126 (2) | | | | | | | | | | | +--Massilia sp. Root351 (1) | | | | | | | | | | | +--Herbaspirillum sp. TSA66 (5) | | | | | | | | | +--Thiomonas delicata (12) | | | | | | | | | +--Thiomonas intermedia K12 (4) | | | | | | | | | +--Burkholderiaceae (71) | | | | | | | | | | | +--Burkholderia sp. ST111 (2) | | | | | | | | | | | +--Burkholderia fungorum (6) | | | | | | | | | | | +--Paraburkholderia ribeironis (2) | | | | | | | | | | | +--Candidatus Burkholderia kirkii UZHbot1 (4) | | | | | | | | | | | +--Burkholderia glathei (1) | | | | | | | | | | | +--Burkholderia sp. MR1 (1) | | | | | | | | | | | +--Burkholderia sp. LMG 22936 (3) | | | | | | | | | | | +--Paraburkholderia sp. SOS3 (1) | | | | | | | | | | | +--Burkholderia phymatum STM815 (1) | | | | | | | | | | | +--Caballeronia peredens (1) | | | | | | | | | | | +--Cupriavidus sp. SK-3 (1) | | | | | | | | | | | +--Burkholderia gladioli BSR3 (1) | | | | | | | | | | | +--Burkholderia sp. SRS-W-2-2016 (1) | | | | | | | | | | | +--Ralstonia pickettii 12J (3) | | | | | | | | | | | +--Burkholderia glumae BGR1 (7) | | | | | | | | | | | +--Cupriavidus metallidurans CH34 (2) | | | | | | | | | | | +--Burkholderia sp. ATSB16 (1) | | | | | | | | | | | +--Burkholderia terricola (1) | | | | | | | | | | | +--Limnobacter sp. MED105 (2) | | | | | | | | | | | +--Lautropia sp. SCN 69-89 (1) | | | | | | | | | | | +--Paraburkholderia susongensis (2) | | | | | | | | | | | +--Burkholderia sp. AD24 (1) | | | | | | | | | | | +--Ralstonia eutropha H16 (1) | | | | | | | | | | | +--Caballeronia udeis (1) | | | | | | | | | | | +--Pandoraea pnomenusa (1) | | | | | | | | | | | +--Burkholderia andropogonis (1) | | | | | | | | | | | +--Burkholderia sp. OLGA172 (7) | | | | | | | | | | | +--Burkholderia rhizoxinica HKI 454 (2) | | | | | | | | | | | +--Burkholderia sp. A9 (1) | | | | | | | | | | | +--Burkholderia (7) | | | | | | | | | | | | | +--Burkholderia pseudomallei K96243 (2) | | | | | | | | | | | | | +--Burkholderia sp. TSV86 (3) | | | | | | | | | | | | | +--Burkholderia multivorans ATCC 17616 (1) | | | | | | | | | | | | | +--Burkholderia glumae PG1 (1) | | | | | | | | | | | +--Cupriavidus sp. USMAA2-4 (1) | | | | | | | | | | | +--Burkholderia caribensis (1) | | | | | | | | | | | +--Burkholderia tropica (1) | | | | | | | | | | | +--Burkholderia sp. lig30 (1) | | | | | | | | | | | +--Burkholderia ubonensis (1) | | | | | | | | | +--Comamonadaceae (68) | | | | | | | | | +--Comamonas testosteroni CNB-2 (1) | | | | | | | | | +--Lampropedia cohaerens (3) | | | | | | | | | +--Limnohabitans sp. 103DPR2 (1) | | | | | | | | | +--Acidovorax sp. 12322-1 (2) | | | | | | | | | +--Acidovorax delafieldii 2AN (1) | | | | | | | | | +--Acidovorax temperans (1) | | | | | | | | | +--Delftia acidovorans SPH-1 (1) | | | | | | | | | +--Hydrogenophaga sp. PBC (5) | | | | | | | | | +--Variovorax sp. WDL1 (5) | | | | | | | | | +--Acidovorax sp. RAC01 (2) | | | | | | | | | +--Hydrogenophaga sp. T4 (1) | | | | | | | | | +--Comamonadaceae bacterium SCN 68-20 (1) | | | | | | | | | +--Acidovorax citrulli AAC00-1 (4) | | | | | | | | | +--Acidovorax sp. NO-1 (1) | | | | | | | | | +--Pseudorhodoferax sp. Leaf267 (1) | | | | | | | | | +--Polaromonas sp. JS666 (2) | | | | | | | | | +--Comamonas sp. SCN 67-35 (1) | | | | | | | | | +--Variovorax sp. PAMC 28711 (4) | | | | | | | | | +--Hydrogenophaga sp. Root209 (2) | | | | | | | | | +--Comamonas (5) | | | | | | | | | | | +--Comamonas aquatica DA1877 (5) | | | | | | | | | +--Acidovorax sp. JS42 (2) | | | | | | | | | +--Alicycliphilus denitrificans K601 (15) | | | | | | | | | +--Curvibacter sp. GWA2_63_95 (1) | | | | | | | | | +--Pelomonas sp. Root1444 (1) | | | | | | | | | +--Acidovorax sp. NA3 (3) | | | | | | | | | +--Variovorax sp. HW608 (2) | | | | | | | +--Rhodocyclales (16) | | | | | | | | | +--Rhodocyclaceae (16) | | | | | | | | | +--Thauera sp. 63 (6) | | | | | | | | | +--Thauera (1) | | | | | | | | | | | +--Thauera linaloolentis 47Lol = DSM 12138 (1) | | | | | | | | | +--Azoarcus sp. CIB (1) | | | | | | | | | +--Azoarcus sp. KH32C (6) | | | | | | | | | +--Azonexus hydrophilus (1) | | | | | | | | | +--Methyloversatilis universalis FAM5 (1) | | | | | | | +--[Polyangium] brachysporum (1) | | | | | | | +--Nitrosomonadales (64) | | | | | | | | | +--Nitrosomonadaceae (64) | | | | | | | | | +--Nitrosomonas eutropha C91 (15) | | | | | | | | | +--Nitrosomonas communis (2) | | | | | | | | | +--Nitrosomonas sp. AL212 (18) | | | | | | | | | +--Nitrosomonas europaea ATCC 19718 (14) | | | | | | | | | +--Nitrosomonas sp. Is79A3 (15) | | | | | | | +--Hydrogenophilales (1) | | | | | | | +--Hydrogenophilaceae (1) | | | | | | | +--Thiobacillus sp. SCN 63-374 (1) | | | | | +--unclassifiedProteobacteria (2) | | | | | | | +--Proteobacteria bacterium SG_bin4 (1) | | | | | | | +--Proteobacteria bacterium SG_bin8 (1) | | | | | +--delta/epsilonsubdivisions (11) | | | | | +--Deltaproteobacteria (11) | | | | | +--Desulfarculales (6) | | | | | | | +--Desulfarculaceae (6) | | | | | | | +--Dethiosulfatarculus sandiegensis (6) | | | | | +--Desulfuromonadales (4) | | | | | | | +--Desulfuromonadaceae (4) | | | | | | | +--Malonomonas (4) | | | | | | | +--Malonomonas rubra DSM 5091 (4) | | | | | +--unclassifiedDeltaproteobacteria (1) | | | | | +--Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8 (1) | | | +--Spirochaetes (5) | | | | | +--Spirochaetia (4) | | | | | | | +--Spirochaetales (4) | | | | | | | +--Spirochaetaceae (4) | | | | | | | +--Spirochaeta lutea (1) | | | | | | | +--Spirochaeta (1) | | | | | | | | | +--Spirochaeta africana DSM 8902 (1) | | | | | | | +--Marispirochaeta aestuarii (1) | | | | | | | +--Salinispira pacifica (1) | | | | | +--Spirochaetales (1) | | | | | +--Spirochaetaceae (1) | | | | | +--Spirochaeta americana (1) | | | +--Acidobacteria (2) | | | | | +--unclassifiedAcidobacteria (2) | | | | | +--Acidobacteria bacterium RBG_16_64_8 (1) | | | | | +--Acidobacteria bacterium SCN 69-37 (1) | | | +--marine actinobacterium PHSC20C1 (1) | | | +--Terrabacteriagroup (193) | | | | | +--Actinobacteria (191) | | | | | | | +--Acidimicrobiia (1) | | | | | | | | | +--Acidimicrobiales (1) | | | | | | | | | +--Microthrixaceae (1) | | | | | | | | | +--CandidatusMicrothrix (1) | | | | | | | | | +--Candidatus Microthrix parvicella RN1 (1) | | | | | | | +--Actinobacteria (189) | | | | | | | | | +--Actinomycetales (3) | | | | | | | | | | | +--Actinomycetaceae (2) | | | | | | | | | | | | | +--Actinomyces (2) | | | | | | | | | | | | | +--Actinomyces cardiffensis F0333 (1) | | | | | | | | | | | | | +--Actinomyces massiliensis F0489 (1) | | | | | | | | | | | +--unclassifiedActinomycetales (1) | | | | | | | | | | | +--Actinomycetales bacterium JB111 (1) | | | | | | | | | +--unclassifiedActinobacteria(class) (3) | | | | | | | | | | | +--Actinobacteria bacterium 66_15 (1) | | | | | | | | | | | +--Actinobacteria bacterium OV450 (1) | | | | | | | | | | | +--Actinobacteria bacterium 69-20 (1) | | | | | | | | | +--Streptomycetales (4) | | | | | | | | | | | +--Streptomycetaceae (4) | | | | | | | | | | | +--Streptomyces sp. IB2014 011-1 (1) | | | | | | | | | | | +--Streptomyces sp. NRRL F-5122 (1) | | | | | | | | | | | +--Streptomyces sp. NBRC 110611 (2) | | | | | | | | | +--Propionibacteriales (8) | | | | | | | | | | | +--Propionibacteriaceae (3) | | | | | | | | | | | | | +--Tessaracoccus lapidicaptus (1) | | | | | | | | | | | | | +--Propionibacterium (2) | | | | | | | | | | | | | +--Propionibacterium acidifaciens F0233 (2) | | | | | | | | | | | +--Nocardioidaceae (5) | | | | | | | | | | | +--Mumia flava (3) | | | | | | | | | | | +--Nocardioides sp. Soil797 (1) | | | | | | | | | | | +--Aeromicrobium sp. Root344 (1) | | | | | | | | | +--Geodermatophilales (4) | | | | | | | | | | | +--Geodermatophilaceae (4) | | | | | | | | | | | +--Modestobacter caceresii (3) | | | | | | | | | | | +--Geodermatophilus saharensis (1) | | | | | | | | | +--Frankiales (3) | | | | | | | | | | | +--Frankiaceae (3) | | | | | | | | | | | +--Frankia sp. BMG5.36 (1) | | | | | | | | | | | +--Candidatus Frankia californiensis (1) | | | | | | | | | | | +--Frankia sp. EUN1h (1) | | | | | | | | | +--Corynebacteriales (58) | | | | | | | | | | | +--Corynebacteriaceae (6) | | | | | | | | | | | | | +--Corynebacterium (6) | | | | | | | | | | | | | +--Corynebacterium freneyi DNF00450 (2) | | | | | | | | | | | | | +--Corynebacterium casei LMG S-19264 (1) | | | | | | | | | | | | | +--Corynebacterium vitaeruminis DSM 20294 (1) | | | | | | | | | | | | | +--Corynebacterium humireducens NBRC 106098 = DSM 45392 (2) | | | | | | | | | | | +--Mycobacteriaceae (22) | | | | | | | | | | | | | +--Mycobacterium sp. 852014-51730_SCH5271717 (1) | | | | | | | | | | | | | +--Mycobacterium grossiae (1) | | | | | | | | | | | | | +--Mycobacterium sp. NAZ190054 (1) | | | | | | | | | | | | | +--Mycobacterium sp. GA-2829 (1) | | | | | | | | | | | | | +--Mycobacterium sp. 852013-51886_SCH5428379 (1) | | | | | | | | | | | | | +--Mycobacterium (14) | | | | | | | | | | | | | | | +--Mycobacteriumchelonaegroup (1) | | | | | | | | | | | | | | | | | +--Mycobacteriumabscessussubgroup (1) | | | | | | | | | | | | | | | | | +--Mycobacterium abscessus subsp. abscessus (1) | | | | | | | | | | | | | | | +--Mycobacterium kansasii 824 (2) | | | | | | | | | | | | | | | +--Mycobacterium xenopi RIVM700367 (2) | | | | | | | | | | | | | | | +--Mycobacterium mageritense DSM 44476 = CIP 104973 (1) | | | | | | | | | | | | | | | +--Mycobacterium xenopi 3993 (4) | | | | | | | | | | | | | | | +--Mycobacterium kansasii 732 (1) | | | | | | | | | | | | | | | +--Mycobacterium phlei DSM 43239 = CCUG 21000 (2) | | | | | | | | | | | | | | | +--Mycobacteriumaviumcomplex(MAC) (1) | | | | | | | | | | | | | | | +--Mycobacterium arosiense ATCC BAA-1401 = DSM 45069 (1) | | | | | | | | | | | | | +--Mycobacterium sp. YC-RL4 (3) | | | | | | | | | | | +--Nocardiaceae (13) | | | | | | | | | | | | | +--Rhodococcus (2) | | | | | | | | | | | | | | | +--Rhodococcus pyridinivorans SB3094 (1) | | | | | | | | | | | | | | | +--Rhodococcus rhodnii LMG 5362 (1) | | | | | | | | | | | | | +--Rhodococcus sp. PBTS 1 (7) | | | | | | | | | | | | | +--Rhodococcus sp. CUA-806 (2) | | | | | | | | | | | | | +--Rhodococcus sp. 1168 (1) | | | | | | | | | | | | | +--Rhodococcus sp. EPR-157 (1) | | | | | | | | | | | +--Williamsiaceae (1) | | | | | | | | | | | | | +--Williamsia sp. D3 (1) | | | | | | | | | | | +--Gordoniaceae (16) | | | | | | | | | | | +--Gordonia sp. NB4-1Y (1) | | | | | | | | | | | +--Gordonia (13) | | | | | | | | | | | | | +--Gordonia sihwensis NBRC 108236 (4) | | | | | | | | | | | | | +--Gordonia sputi NBRC 100414 (2) | | | | | | | | | | | | | +--Gordonia terrae NBRC 100016 (1) | | | | | | | | | | | | | +--Gordonia malaquae NBRC 108250 (4) | | | | | | | | | | | | | +--Gordonia polyisoprenivorans VH2 (2) | | | | | | | | | | | +--Gordonia sp. QH-11 (2) | | | | | | | | | +--Pseudonocardiales (30) | | | | | | | | | | | +--Pseudonocardiaceae (30) | | | | | | | | | | | +--Actinoalloteichus sp. GBA129-24 (1) | | | | | | | | | | | +--Pseudonocardia sp. HH130629-09 (13) | | | | | | | | | | | +--Pseudonocardia sp. EC080619-01 (9) | | | | | | | | | | | +--Pseudonocardia sp. 73-21 (2) | | | | | | | | | | | +--Kutzneria (3) | | | | | | | | | | | | | +--Kutzneria albida DSM 43870 (3) | | | | | | | | | | | +--Saccharomonospora sp. LRS4.154 (1) | | | | | | | | | | | +--Saccharothrix sp. NRRL B-16348 (1) | | | | | | | | | +--Micrococcales (73) | | | | | | | | | | | +--Dermabacteraceae (3) | | | | | | | | | | | | | +--Brachybacterium (2) | | | | | | | | | | | | | | | +--Brachybacterium muris UCD-AY4 (2) | | | | | | | | | | | | | +--Brachybacterium sp. SW0106-09 (1) | | | | | | | | | | | +--unclassifiedMicrococcales (2) | | | | | | | | | | | | | +--Micrococcales bacterium 73-15 (1) | | | | | | | | | | | | | +--Micrococcales bacterium 73-13 (1) | | | | | | | | | | | +--Micrococcaceae (13) | | | | | | | | | | | | | +--Tersicoccus sp. Bi-70 (3) | | | | | | | | | | | | | +--Sinomonas sp. R1AF57 (1) | | | | | | | | | | | | | +--Arthrobacter sp. Hiyo8 (1) | | | | | | | | | | | | | +--Sinomonas humi (1) | | | | | | | | | | | | | +--Nesterenkonia sp. PF2B19 (1) | | | | | | | | | | | | | +--Kocuria (3) | | | | | | | | | | | | | | | +--Kocuria palustris PEL (3) | | | | | | | | | | | | | +--Arthrobacter sp. Hiyo1 (1) | | | | | | | | | | | | | +--Micrococcus sp. HMSC067E09 (1) | | | | | | | | | | | | | +--Arthrobacter sp. Leaf234 (1) | | | | | | | | | | | +--Microbacteriaceae (15) | | | | | | | | | | | | | +--Microbacterium sp. 67-17 (1) | | | | | | | | | | | | | +--Agrococcus (6) | | | | | | | | | | | | | | | +--Agrococcus pavilionensis RW1 (1) | | | | | | | | | | | | | | | +--Agrococcus casei LMG 22410 (5) | | | | | | | | | | | | | +--Microbacterium sp. CH12i (2) | | | | | | | | | | | | | +--Microbacterium (2) | | | | | | | | | | | | | | | +--Microbacterium laevaniformans OR221 (2) | | | | | | | | | | | | | +--Microbacterium sp. Root53 (2) | | | | | | | | | | | | | +--Microbacterium sp. C448 (2) | | | | | | | | | | | +--Promicromonosporaceae (1) | | | | | | | | | | | | | +--Cellulosimicrobium sp. CUA-896 (1) | | | | | | | | | | | +--Dermacoccaceae (12) | | | | | | | | | | | | | +--Luteipulveratus halotolerans (10) | | | | | | | | | | | | | +--Kytococcus sp. CUA-901 (1) | | | | | | | | | | | | | +--Dermacoccus sp. PE3 (1) | | | | | | | | | | | +--Intrasporangiaceae (18) | | | | | | | | | | | | | +--Terrabacter sp. 28 (1) | | | | | | | | | | | | | +--Knoellia (3) | | | | | | | | | | | | | | | +--Knoellia aerolata DSM 18566 (2) | | | | | | | | | | | | | | | +--Knoellia sinensis KCTC 19936 (1) | | | | | | | | | | | | | +--Serinicoccus sp. CNJ-927 (3) | | | | | | | | | | | | | +--Janibacter (2) | | | | | | | | | | | | | | | +--Janibacter hoylei PVAS-1 (2) | | | | | | | | | | | | | +--Knoellia sp. Soil729 (1) | | | | | | | | | | | | | +--Tetrasphaera (4) | | | | | | | | | | | | | | | +--Tetrasphaera elongata Lp2 (1) | | | | | | | | | | | | | | | +--Tetrasphaera australiensis Ben110 (1) | | | | | | | | | | | | | | | +--Tetrasphaera jenkinsii Ben 74 (1) | | | | | | | | | | | | | | | +--Tetrasphaera japonica T1-X7 (1) | | | | | | | | | | | | | +--Arsenicicoccus sp. oral taxon 190 (2) | | | | | | | | | | | | | +--Serinicoccus sp. JLT9 (2) | | | | | | | | | | | +--Brevibacteriaceae (1) | | | | | | | | | | | | | +--Brevibacterium (1) | | | | | | | | | | | | | +--Brevibacterium casei S18 (1) | | | | | | | | | | | +--Cellulomonadaceae (4) | | | | | | | | | | | | | +--Cellulomonas (1) | | | | | | | | | | | | | | | +--Cellulomonas bogoriensis 69B4 = DSM 16987 (1) | | | | | | | | | | | | | +--Cellulomonas sp. A375-1 (1) | | | | | | | | | | | | | +--Cellulomonas sp. PSBB021 (2) | | | | | | | | | | | +--Dermatophilaceae (4) | | | | | | | | | | | +--Mobilicoccus (4) | | | | | | | | | | | +--Mobilicoccus pelagius NBRC 104925 (4) | | | | | | | | | +--Streptosporangiales (3) | | | | | | | | | +--Nocardiopsaceae (3) | | | | | | | | | +--Nocardiopsis sp. TSRI0078 (1) | | | | | | | | | +--Nocardiopsis sp. JB363 (2) | | | | | | | +--Actinobacteria bacterium RBG_13_55_18 (1) | | | | | +--Cyanobacteria/Melainabacteriagroup (1) | | | | | | | +--Cyanobacteria (1) | | | | | | | +--Oscillatoriophycideae (1) | | | | | | | +--Oscillatoriales (1) | | | | | | | +--Oscillatoriaceae (1) | | | | | | | +--Lyngbya (1) | | | | | | | +--Lyngbya confervoides BDU141951 (1) | | | | | +--Chloroflexi (1) | | | | | +--unclassifiedChloroflexi (1) | | | | | +--Chloroflexi bacterium 13_1_40CM_4_65_13 (1) | | | +--PVCgroup (1) | | | | | +--Planctomycetes (1) | | | | | +--Phycisphaerae (1) | | | | | +--Phycisphaerae bacterium SG8_4 (1) | | | +--FCBgroup (2) | | | +--Gemmatimonadetes (2) | | | +--Gemmatimonadetes bacterium SCN 70-22 (2) | +--Viruses (8) | +--dsDNAviruses,noRNAstage (8) | +--Caudovirales (8) | +--Enterobacteria phage VT2phi_272 (1) | +--Enterobacteria phage 2851 (1) | +--Siphoviridae (6) | +--Lambda-likeviruses (4) | | | +--Stx2 converting phage II (1) | | | +--Burkholderia phage phiE125 (1) | | | +--Enterobacteria phage BP-4795 (2) | +--Gordonia phage Cucurbita (1) | +--Gordonia phage Blueberry (1)