# Species tree for RF01057 # Generated from Rfam version 14.10 | +--unclassifiedsequences (11) | | | +--metagenome sequence (10) | | | +--metagenomes (1) | | | +--marine metagenome (1) | +--Eukaryota (8) | | | +--Alveolata (1) | | | | | +--Apicomplexa (1) | | | | | +--Aconoidasida (1) | | | | | +--Haemosporida (1) | | | | | +--Plasmodium (1) | | | | | +--Plasmodium yoelii yoelii (1) | | | +--Metazoa (3) | | | | | +--Nematoda (2) | | | | | | | +--Chromadorea (2) | | | | | | | +--Rhabditida (2) | | | | | | | +--Panagrolaimoidea (2) | | | | | | | +--Steinernematidae (2) | | | | | | | +--Steinernema glaseri (2) | | | | | +--Arthropoda (1) | | | | | +--Chelicerata (1) | | | | | +--Arachnida (1) | | | | | +--Acari (1) | | | | | +--Parasitiformes (1) | | | | | +--Ixodida (1) | | | | | +--Ixodoidea (1) | | | | | +--Ixodidae (1) | | | | | +--Ixodinae (1) | | | | | +--Ixodes scapularis (black-legged tick) (1) | | | +--Rhizaria (1) | | | | | +--Foraminifera (1) | | | | | +--Reticulomyxidae (1) | | | | | +--Reticulomyxa filosa (1) | | | +--Viridiplantae (3) | | | +--Streptophyta (3) | | | +--Embryophyta (3) | | | +--Tracheophyta (3) | | | +--Spermatophyta (3) | | | +--Magnoliophyta (3) | | | +--eudicotyledons (3) | | | +--coreeudicotyledons (3) | | | +--Caryophyllales (1) | | | | | +--Amaranthaceae (1) | | | | | +--Spinacia oleracea (spinach) (1) | | | +--rosids (2) | | | +--malvids (2) | | | +--Malvales (2) | | | +--Malvaceae (2) | | | +--Grewioideae (2) | | | +--Corchorus olitorius (2) | +--Bacteria (842) | +--Actinobacteria (35) | | | +--Actinobacteridae (35) | | | +--Actinomycetales (35) | | | +--Streptomycineae (2) | | | | | +--Streptomycetaceae (2) | | | | | +--Streptomyces sp. AA4 (2) | | | +--Streptosporangineae (1) | | | | | +--Streptosporangiaceae (1) | | | | | +--Streptosporangium roseum DSM 43021 (1) | | | +--Propionibacterineae (1) | | | | | +--Nocardioidaceae (1) | | | | | +--Kribbella flavida DSM 17836 (1) | | | +--Pseudonocardineae (13) | | | | | +--Actinosynnemataceae (1) | | | | | | | +--Lechevalieria aerocolonigenes (1) | | | | | +--Actinophytocola sp. QAIII60 (1) | | | | | +--Pseudonocardiaceae (11) | | | | | +--Amycolatopsis mediterranei S699 (2) | | | | | +--Amycolatopsis halophila YIM 93223 (1) | | | | | +--Amycolatopsis australiensis (1) | | | | | +--Pseudonocardia thermophila (1) | | | | | +--Kutzneria sp. 744 (1) | | | | | +--Kibdelosporangium sp. KLBMP 1111 (2) | | | | | +--Kibdelosporangium aridum (2) | | | | | +--Kibdelosporangium albatum (1) | | | +--Micromonosporineae (13) | | | | | +--Micromonosporaceae (13) | | | | | +--Asanoa sp. 210121 (1) | | | | | +--Couchioplanes caeruleus subsp. caeruleus (1) | | | | | +--Actinoplanes sp. N902-109 (2) | | | | | +--Actinoplanes awajinensis subsp. mycoplanecinus (1) | | | | | +--Actinoplanes sp. SE50/110 (2) | | | | | +--Actinoplanes regularis (2) | | | | | +--Actinoplanes utahensis (1) | | | | | +--Micromonospora carbonacea (2) | | | | | +--Actinoplanes derwentensis (1) | | | +--Frankineae (5) | | | +--Frankiaceae (5) | | | +--Frankia sp. EI5c (1) | | | +--Frankia sp. Cc1.17 (1) | | | +--Frankia sp. EAN1pec (1) | | | +--Frankia alni ACN14a (1) | | | +--Frankia sp. EUN1f (1) | +--unclassifiedBacteria (1) | | | +--bacterium AM6 (1) | +--Proteobacteria (779) | | | +--Acidithiobacillia (2) | | | | | +--Acidithiobacillales (2) | | | | | +--Acidithiobacillales bacterium SG8_45 (1) | | | | | +--Acidithiobacillales bacterium SM1_46 (1) | | | +--Thiobacillus prosperus (1) | | | +--Candidatus Muproteobacteria bacterium RBG_16_60_9 (1) | | | +--Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_01_FULL_65_16 (1) | | | +--Alphaproteobacteria (2) | | | | | +--Rhizobiales (1) | | | | | | | +--Bradyrhizobiaceae (1) | | | | | | | +--Bosea sp. TND4EK4 (1) | | | | | +--Caulobacterales (1) | | | | | +--Caulobacteraceae (1) | | | | | +--Caulobacteraceae bacterium OTSz_A_272 (1) | | | +--Oligoflexia (2) | | | | | +--Bdellovibrionales (2) | | | | | +--Bdellovibrionales bacterium GWA1_52_35 (1) | | | | | +--Bdellovibrionales bacterium GWB1_55_8 (1) | | | +--Deltaproteobacteria (6) | | | | | +--Myxococcales (6) | | | | | +--Cystobacterineae (6) | | | | | +--Cystobacteraceae (4) | | | | | | | +--Stigmatella aurantiaca DW4/3-1 (2) | | | | | | | +--Archangium gephyra (1) | | | | | | | +--Hyalangium minutum (1) | | | | | +--Myxococcaceae (2) | | | | | +--Myxococcus xanthus DK 1622 (2) | | | +--Betaproteobacteria (496) | | | | | +--unclassifiedBetaproteobacteria (37) | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17 (1) | | | | | | | +--beta proteobacterium AAP65 (2) | | | | | | | +--Betaproteobacteria bacterium RBG_16_58_11 (1) | | | | | | | +--beta proteobacterium AAP99 (1) | | | | | | | +--Betaproteobacteria bacterium MOLA814 (2) | | | | | | | +--Candidatus Accumulibacter sp. BA-93 (1) | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 (1) | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 (1) | | | | | | | +--Betaproteobacteria bacterium CG2_30_59_46 (1) | | | | | | | +--Candidatus Accumulibacter sp. 66-26 (1) | | | | | | | +--Candidatus Accumulibacter sp. SK-02 (1) | | | | | | | +--Betaproteobacteria bacterium SCGC AG-212-J23 (1) | | | | | | | +--Betaproteobacteria bacterium SG8_40 (1) | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_19 (1) | | | | | | | +--Betaproteobacteria bacterium RBG_16_56_24 (1) | | | | | | | +--Betaproteobacteria bacterium CG2_30_68_42 (1) | | | | | | | +--Candidatus Accumulibacter aalborgensis (1) | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 (1) | | | | | | | +--Betaproteobacteria bacterium GR16-43 (1) | | | | | | | +--Betaproteobacteria bacterium RBG_16_66_20 (1) | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 (1) | | | | | | | +--Candidatus Accumulibacter sp. BA-91 (1) | | | | | | | +--Candidatus Accumulibacter sp. BA-94 (1) | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 (1) | | | | | | | +--Candidatus Accumulibacter sp. SK-11 (1) | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 (1) | | | | | | | +--Betaproteobacteria bacterium SG8_41 (2) | | | | | | | +--Betaproteobacteria bacterium UKL13-2 (1) | | | | | | | +--Candidatus Accumulibacter sp. SK-12 (1) | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 (2) | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_61_14 (1) | | | | | | | +--Betaproteobacteria bacterium SG8_39 (1) | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13 (1) | | | | | +--Methylophilales (10) | | | | | | | +--Methylophilaceae (10) | | | | | | | +--Methylovorus glucosetrophus SIP3-4 (1) | | | | | | | +--Methylobacillus sp. MM2 (1) | | | | | | | +--Methylobacillus flagellatus KT (1) | | | | | | | +--Methylophilus sp. Leaf416 (1) | | | | | | | +--Candidatus Methylopumilus planktonicus (1) | | | | | | | +--Candidatus Methylopumilus turicensis (1) | | | | | | | +--Methylovorus sp. MM1 (1) | | | | | | | +--Methylophilaceae bacterium 11 (1) | | | | | | | +--Methylotenera versatilis 301 (1) | | | | | | | +--Methylotenera mobilis JLW8 (1) | | | | | +--Burkholderiales (348) | | | | | | | +--Thiomonas sp. S10 (2) | | | | | | | +--Roseateles depolymerans (2) | | | | | | | +--Leptothrix cholodnii SP-6 (2) | | | | | | | +--Advenella kashmirensis WT001 (1) | | | | | | | +--Comamonadaceae (134) | | | | | | | | | +--Limnohabitans sp. 103DPR2 (2) | | | | | | | | | +--Ramlibacter tataouinensis TTB310 (2) | | | | | | | | | +--Acidovorax delafieldii 2AN (2) | | | | | | | | | +--Acidovorax sp. Leaf160 (2) | | | | | | | | | +--Comamonadaceae bacterium CG2_30_59_20 (2) | | | | | | | | | +--Pseudacidovorax intermedius (1) | | | | | | | | | +--Variovorax paradoxus (2) | | | | | | | | | +--Acidovorax sp. NO-1 (2) | | | | | | | | | +--Acidovorax sp. CF316 (2) | | | | | | | | | +--Comamonadaceae bacterium CG1_02_60_18 (2) | | | | | | | | | +--Variovorax sp. Root473 (2) | | | | | | | | | +--Acidovorax sp. MR-S7 (2) | | | | | | | | | +--Pelomonas sp. Root1444 (3) | | | | | | | | | +--Curvibacter sp. GWA2_64_110 (2) | | | | | | | | | +--Verminephrobacter eiseniae EF01-2 (2) | | | | | | | | | +--Rhodoferax saidenbachensis (3) | | | | | | | | | +--Variovorax sp. HW608 (2) | | | | | | | | | +--Acidovorax sp. KKS102 (2) | | | | | | | | | +--Comamonadaceae bacterium CG2_30_60_41 (1) | | | | | | | | | +--Hydrogenophaga sp. PBC (2) | | | | | | | | | +--Albidiferax ferrireducens (2) | | | | | | | | | +--Variovorax sp. WDL1 (2) | | | | | | | | | +--Comamonas testosteroni KF-1 (1) | | | | | | | | | +--Ramlibacter sp. Leaf400 (2) | | | | | | | | | +--Hydrogenophaga sp. H7 (1) | | | | | | | | | +--Acidovorax sp. 65-7 (3) | | | | | | | | | +--Rhodoferax koreense (2) | | | | | | | | | +--Rhodoferax fermentans (2) | | | | | | | | | +--Variovorax sp. PAMC 28711 (2) | | | | | | | | | +--Hydrogenophaga sp. A37 (2) | | | | | | | | | +--Comamonadaceae bacterium A1 (1) | | | | | | | | | +--Comamonadaceae bacterium CG2_30_57_122 (1) | | | | | | | | | +--Ottowia sp. oral taxon 894 (3) | | | | | | | | | +--Acidovorax sp. Leaf78 (1) | | | | | | | | | +--Lampropedia (1) | | | | | | | | | | | +--Lampropedia hyalina DSM 16112 (1) | | | | | | | | | +--Rhodoferax (2) | | | | | | | | | | | +--Rhodoferax antarcticus ANT.BR (2) | | | | | | | | | +--Acidovorax sp. SCN 68-22 (1) | | | | | | | | | +--Limnohabitans (2) | | | | | | | | | | | +--Limnohabitans planktonicus II-D5 (2) | | | | | | | | | +--Delftia acidovorans SPH-1 (3) | | | | | | | | | +--Acidovorax sp. RAC01 (2) | | | | | | | | | +--Variovorax sp. JS1663 (2) | | | | | | | | | +--Hydrogenophaga sp. T4 (2) | | | | | | | | | +--Rhodoferax ferrireducens T118 (3) | | | | | | | | | +--Comamonadaceae bacterium SCN 68-20 (2) | | | | | | | | | +--Polaromonas sp. CG9_12 (2) | | | | | | | | | +--Acidovorax citrulli AAC00-1 (2) | | | | | | | | | +--Pseudorhodoferax sp. Leaf267 (2) | | | | | | | | | +--Hydrogenophaga crassostreae (2) | | | | | | | | | +--Comamonas sp. SCN 67-35 (2) | | | | | | | | | +--Comamonas (2) | | | | | | | | | | | +--Comamonas aquatica DA1877 (2) | | | | | | | | | +--Acidovorax sp. NA3 (2) | | | | | | | | | +--Polaromonas sp. CF318 (2) | | | | | | | | | +--Comamonas testosteroni CNB-2 (2) | | | | | | | | | +--Lampropedia cohaerens (1) | | | | | | | | | +--Ramlibacter tataouinensis (2) | | | | | | | | | +--Hylemonella gracilis ATCC 19624 (2) | | | | | | | | | +--Polaromonas naphthalenivorans CJ2 (3) | | | | | | | | | +--Acidovorax sp. 12322-1 (1) | | | | | | | | | +--Acidovorax temperans (2) | | | | | | | | | +--Pseudorhodoferax sp. Leaf274 (2) | | | | | | | | | +--Curvibacter sp. PAE-UM (2) | | | | | | | | | +--Polaromonas sp. JS666 (3) | | | | | | | | | +--Hydrogenophaga sp. Root209 (2) | | | | | | | | | +--Hydrogenophaga sp. IBVHS1 (2) | | | | | | | | | +--Acidovorax sp. JS42 (3) | | | | | | | | | +--Limnohabitans sp. 63ED37-2 (2) | | | | | | | | | +--Alicycliphilus denitrificans K601 (2) | | | | | | | | | +--Curvibacter sp. GWA2_63_95 (2) | | | | | | | +--Alcaligenaceae (28) | | | | | | | | | +--Bordetella sp. AU3182 (1) | | | | | | | | | +--Oligella (1) | | | | | | | | | | | +--Oligella urethralis DNF00040 (1) | | | | | | | | | +--Bordetella genomosp. 9 (1) | | | | | | | | | +--Bordetella pertussis Tohama I (1) | | | | | | | | | +--Bordetella ansorpii (1) | | | | | | | | | +--Achromobacter xylosoxidans A8 (1) | | | | | | | | | +--Alcaligenes sp. EGD-AK7 (1) | | | | | | | | | +--Candidimonas nitroreducens (1) | | | | | | | | | +--Bordetella hinzii (1) | | | | | | | | | +--Achromobacter xylosoxidans AXX-A (1) | | | | | | | | | +--Bordetella sp. SCN 67-23 (1) | | | | | | | | | +--Bordetella sp. N (1) | | | | | | | | | +--Bordetella petrii (1) | | | | | | | | | +--Kerstersia gyiorum (1) | | | | | | | | | +--Bordetella sp. H567 (1) | | | | | | | | | +--Pelistega indica (1) | | | | | | | | | +--Castellaniella (1) | | | | | | | | | | | +--Castellaniella defragrans 65Phen (1) | | | | | | | | | +--Pusillimonas sp. T7-7 (1) | | | | | | | | | +--Bordetella sp. AU10664 (1) | | | | | | | | | +--Bordetella trematum (1) | | | | | | | | | +--Orrella dioscoreae (1) | | | | | | | | | +--Bordetella avium 197N (1) | | | | | | | | | +--Achromobacter piechaudii ATCC 43553 (1) | | | | | | | | | +--Achromobacter sp. DMS1 (1) | | | | | | | | | +--Paenalcaligenes hominis (1) | | | | | | | | | +--Bordetella genomosp. 8 (1) | | | | | | | | | +--Achromobacter (1) | | | | | | | | | | | +--Achromobacter piechaudii HLE (1) | | | | | | | | | +--Advenella (1) | | | | | | | | | +--Advenella mimigardefordensis DPN7 (1) | | | | | | | +--Oxalobacteraceae bacterium IMCC9480 (1) | | | | | | | +--Alcaligenaceae bacterium BZ59 (1) | | | | | | | +--Roseateles aquatilis (2) | | | | | | | +--Oxalobacteraceae (29) | | | | | | | | | +--Oxalobacter formigenes HOxBLS (1) | | | | | | | | | +--Janthinobacterium sp. CG23_2 (1) | | | | | | | | | +--Massilia sp. Leaf139 (1) | | | | | | | | | +--Duganella sp. Leaf126 (1) | | | | | | | | | +--Herbaspirillum sp. HZ10 (1) | | | | | | | | | +--Massilia sp. KIM (1) | | | | | | | | | +--Janthinobacterium sp. KBS0711 (1) | | | | | | | | | +--Massilia sp. JS1662 (1) | | | | | | | | | +--Janthinobacterium sp. Marseille (1) | | | | | | | | | +--Herminiimonas arsenicoxydans (1) | | | | | | | | | +--Janthinobacterium (1) | | | | | | | | | | | +--Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 (1) | | | | | | | | | +--Herbaspirillum seropedicae SmR1 (1) | | | | | | | | | +--Herbaspirillum sp. TSA66 (1) | | | | | | | | | +--Collimonas fungivorans Ter331 (1) | | | | | | | | | +--Oxalobacter formigenes OXCC13 (1) | | | | | | | | | +--Duganella sp. Sac-22 (1) | | | | | | | | | +--Herbaspirillum sp. YR522 (1) | | | | | | | | | +--Massilia (1) | | | | | | | | | | | +--Massilia timonae CCUG 45783 (1) | | | | | | | | | +--Massilia sp. LC238 (1) | | | | | | | | | +--Noviherbaspirillum sp. Root189 (1) | | | | | | | | | +--Janthinobacterium sp. HH01 (1) | | | | | | | | | +--Massilia sp. CF038 (1) | | | | | | | | | +--Massilia sp. NR 4-1 (1) | | | | | | | | | +--Duganella sp. Root198D2 (1) | | | | | | | | | +--Massilia sp. WF1 (1) | | | | | | | | | +--Herbaspirillum sp. CF444 (1) | | | | | | | | | +--Collimonas arenae (1) | | | | | | | | | +--Massilia sp. Root351 (1) | | | | | | | | | +--Massilia sp. BSC265 (1) | | | | | | | +--unclassifiedBurkholderiales (48) | | | | | | | | | +--Burkholderiales bacterium GWF1_66_17 (2) | | | | | | | | | +--Burkholderiales bacterium 68-12 (2) | | | | | | | | | +--Burkholderiales bacterium GJ-E10 (1) | | | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_99 (1) | | | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 (1) | | | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_02_FULL_67_64 (2) | | | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_12_FULL_65_40 (2) | | | | | | | | | +--Burkholderiales bacterium 68-10 (2) | | | | | | | | | +--Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_61_11 (2) | | | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_12_FULL_61_40 (2) | | | | | | | | | +--Burkholderiales bacterium 70-64 (1) | | | | | | | | | +--Burkholderiales bacterium RIFOXYD12_FULL_59_19 (2) | | | | | | | | | +--BurkholderialesGeneraincertaesedis (22) | | | | | | | | | | | +--Mitsuaria sp. 7 (2) | | | | | | | | | | | +--Ideonella sakaiensis (2) | | | | | | | | | | | +--Aquabacterium sp. NJ1 (1) | | | | | | | | | | | +--Xylophilus sp. Leaf220 (2) | | | | | | | | | | | +--Rubrivivax sp. SCN 71-131 (2) | | | | | | | | | | | +--Rhizobacter sp. Root1221 (2) | | | | | | | | | | | +--Rhizobacter sp. Root404 (2) | | | | | | | | | | | +--Rubrivivax (2) | | | | | | | | | | | | | +--Rubrivivax gelatinosus IL144 (2) | | | | | | | | | | | +--Rhizobacter sp. Root29 (2) | | | | | | | | | | | +--Sphaerotilus (1) | | | | | | | | | | | | | +--Sphaerotilusnatans (1) | | | | | | | | | | | | | +--Sphaerotilus natans subsp. natans DSM 6575 (1) | | | | | | | | | | | +--Methylibium sp. NZG (2) | | | | | | | | | | | +--Paucibacter sp. KCTC 42545 (2) | | | | | | | | | +--Burkholderiales bacterium RIFOXYC12_FULL_65_23 (1) | | | | | | | | | +--Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_69_20 (2) | | | | | | | | | +--Burkholderiales bacterium 66-5 (2) | | | | | | | | | +--Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_63_240 (1) | | | | | | | +--Thiomonas delicata (1) | | | | | | | +--Thiomonas intermedia K12 (2) | | | | | | | +--Burkholderiaceae (88) | | | | | | | | | +--Burkholderia xenovorans LB400 (1) | | | | | | | | | +--Burkholderia sp. ST111 (1) | | | | | | | | | +--Burkholderia fungorum (1) | | | | | | | | | +--Ralstonia sp. PBA (1) | | | | | | | | | +--Burkholderia glathei (1) | | | | | | | | | +--Paraburkholderia sp. SOS3 (1) | | | | | | | | | +--Caballeronia peredens (1) | | | | | | | | | +--Burkholderia phenazinium (1) | | | | | | | | | +--Candidatus Burkholderia crenata (1) | | | | | | | | | +--Burkholderia sp. SRS-W-2-2016 (1) | | | | | | | | | +--Ralstonia pickettii 12J (2) | | | | | | | | | +--Paraburkholderia piptadeniae (1) | | | | | | | | | +--Cupriavidus metallidurans CH34 (2) | | | | | | | | | +--Burkholderia caryophylli (1) | | | | | | | | | +--Cupriavidus sp. UYMMa02A (1) | | | | | | | | | +--Candidatus Burkholderia calva (1) | | | | | | | | | +--Burkholderia terricola (1) | | | | | | | | | +--Cupriavidus basilensis (1) | | | | | | | | | +--Burkholderia sp. SD3175 (1) | | | | | | | | | +--Chitinimonas (1) | | | | | | | | | | | +--Chitinimonas taiwanensis DSM 18899 (1) | | | | | | | | | +--Cupriavidus sp. HPC(L) (1) | | | | | | | | | +--Pandoraea pnomenusa (1) | | | | | | | | | +--Burkholderia rhizoxinica HKI 454 (1) | | | | | | | | | +--Candidatus Burkholderia kirkii (1) | | | | | | | | | +--Burkholderia sp. A9 (1) | | | | | | | | | +--Burkholderia sp. BR2009044596 (1) | | | | | | | | | +--Burkholderia (9) | | | | | | | | | | | +--Burkholderia pseudomallei K96243 (1) | | | | | | | | | | | +--Burkholderia sp. TSV86 (1) | | | | | | | | | | | +--Burkholderia latens (1) | | | | | | | | | | | +--Burkholderia multivorans ATCC 17616 (1) | | | | | | | | | | | +--Burkholderia glumae PG1 (1) | | | | | | | | | | | +--Burkholderia vietnamiensis G4 (1) | | | | | | | | | | | +--Burkholderia cenocepacia J2315 (1) | | | | | | | | | | | +--Burkholderia singularis (1) | | | | | | | | | | | +--Burkholderia thailandensis E264 (1) | | | | | | | | | +--Burkholderia sp. Bk (1) | | | | | | | | | +--Caballeronia (1) | | | | | | | | | | | +--Caballeronia glathei PML1(12) (1) | | | | | | | | | +--Burkholderia sp. RPE64 (1) | | | | | | | | | +--Cupriavidus sp. USMAA2-4 (1) | | | | | | | | | +--Burkholderia sp. lig30 (1) | | | | | | | | | +--Polynucleobacter sp. VK13 (1) | | | | | | | | | +--Polynucleobacter duraquae (1) | | | | | | | | | +--Candidatus Burkholderia verschuerenii (1) | | | | | | | | | +--Burkholderia sp. CCGE1003 (1) | | | | | | | | | +--Paraburkholderia ribeironis (1) | | | | | | | | | +--Candidatus Burkholderia kirkii UZHbot1 (1) | | | | | | | | | +--Burkholderia sp. MR1 (1) | | | | | | | | | +--Burkholderia sp. LMG 22936 (1) | | | | | | | | | +--Burkholderia sp. TJI49 (1) | | | | | | | | | +--Burkholderia sp. BR2004143571 (1) | | | | | | | | | +--Burkholderia phymatum STM815 (2) | | | | | | | | | +--Burkholderia gladioli BSR3 (1) | | | | | | | | | +--Cupriavidus sp. SK-3 (1) | | | | | | | | | +--Burkholderia glumae BGR1 (1) | | | | | | | | | +--Polynucleobacter necessarius subsp. necessarius STIR1 (1) | | | | | | | | | +--Burkholderia sp. ATSB16 (1) | | | | | | | | | +--Caballeronia calidae (1) | | | | | | | | | +--Limnobacter sp. MED105 (2) | | | | | | | | | +--Burkholderia sp. LMG 22934 (1) | | | | | | | | | +--Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 (1) | | | | | | | | | +--Lautropia sp. SCN 69-89 (1) | | | | | | | | | +--Ralstonia solanacearum GMI1000 (2) | | | | | | | | | +--Paraburkholderia susongensis (1) | | | | | | | | | +--Burkholderia sp. H160 (1) | | | | | | | | | +--Paraburkholderia ginsengiterrae (1) | | | | | | | | | +--Burkholderia sp. AD24 (1) | | | | | | | | | +--Burkholderia glumae (1) | | | | | | | | | +--Ralstonia eutropha H16 (2) | | | | | | | | | +--Caballeronia udeis (1) | | | | | | | | | +--Burkholderia sp. OLGA172 (1) | | | | | | | | | +--Burkholderia andropogonis (1) | | | | | | | | | +--Burkholderia sacchari (1) | | | | | | | | | +--Polynucleobacter sphagniphilus (1) | | | | | | | | | +--Lautropia mirabilis ATCC 51599 (1) | | | | | | | | | +--Burkholderia sp. LMG 22940 (1) | | | | | | | | | +--Burkholderia sp. Leaf177 (1) | | | | | | | | | +--Ralstonia eutropha JMP134 (2) | | | | | | | | | +--Burkholderia caribensis (1) | | | | | | | | | +--Burkholderia tropica (1) | | | | | | | | | +--Ralstonia solanacearum IPO1609 (1) | | | | | | | | | +--Burkholderia ubonensis (1) | | | | | | | +--Methylibium petroleiphilum PM1 (3) | | | | | | | +--Methylibium sp. NS21 (1) | | | | | | | +--Sutterellaceae (3) | | | | | | | +--Sutterella (3) | | | | | | | +--Sutterella parvirubra YIT 11816 (1) | | | | | | | +--Sutterella sp. CAG:521 (1) | | | | | | | +--Sutterella wadsworthensis CAG:135 (1) | | | | | +--Rhodocyclales (37) | | | | | | | +--Rhodocyclaceae (36) | | | | | | | | | +--Azoarcus sp. BH72 (3) | | | | | | | | | +--Dechlorosoma suillum PS (2) | | | | | | | | | +--Thauera (4) | | | | | | | | | | | +--Thauera linaloolentis 47Lol = DSM 12138 (2) | | | | | | | | | | | +--Thauera terpenica 58Eu (2) | | | | | | | | | +--Dechloromonas denitrificans (2) | | | | | | | | | +--Methyloversatilis universalis FAM5 (1) | | | | | | | | | +--Rugosibacter aromaticivorans (2) | | | | | | | | | +--Dechloromonas aromatica RCB (3) | | | | | | | | | +--Thauera sp. 63 (1) | | | | | | | | | +--Petrobacter sp. JHK30 (2) | | | | | | | | | +--Aromatoleum aromaticum EbN1 (3) | | | | | | | | | +--Azoarcus sp. KH32C (2) | | | | | | | | | +--Thauera sp. 27 (1) | | | | | | | | | +--Azoarcus sp. CIB (2) | | | | | | | | | +--Thauera chlorobenzoica (1) | | | | | | | | | +--Azonexus hydrophilus (2) | | | | | | | | | +--Methyloversatilis sp. RAC08 (1) | | | | | | | | | +--Sulfuritalea (1) | | | | | | | | | | | +--Sulfuritalea hydrogenivorans sk43H (1) | | | | | | | | | +--Candidatus Propionivibrio aalborgensis (1) | | | | | | | | | +--Thauera sp. MZ1T (2) | | | | | | | +--Rhodocyclales bacterium RIFCSPLOWO2_02_FULL_63_24 (1) | | | | | +--Sulfuricellales (1) | | | | | | | +--Sulfuricellaceae (1) | | | | | | | +--Sulfuricella (1) | | | | | | | +--Sulfuricella denitrificans skB26 (1) | | | | | +--Candidatus Accumulibacter phosphatis clade IIA str. UW-1 (2) | | | | | +--Burkholderiales bacterium JOSHI_001 (2) | | | | | +--Gallionellales (4) | | | | | | | +--Gallionellaceae (4) | | | | | | | +--Sideroxydans lithotrophicus ES-1 (1) | | | | | | | +--Gallionella capsiferriformans ES-2 (1) | | | | | | | +--Ferriphaselus amnicola (1) | | | | | | | +--Candidatus Gallionella acididurans (1) | | | | | +--Neisseriales (16) | | | | | | | +--Chromobacteriaceae (8) | | | | | | | | | +--Jeongeupia sp. USM3 (1) | | | | | | | | | +--Vogesella sp. EB (1) | | | | | | | | | +--Aquaspirillum sp. LM1 (1) | | | | | | | | | +--Vogesella sp. LIG4 (1) | | | | | | | | | +--Chromobacteriumgroup (3) | | | | | | | | | | | +--Chromobacterium sp. LK11 (1) | | | | | | | | | | | +--Chromobacterium sphagni (1) | | | | | | | | | | | +--Chromobacterium amazonense (1) | | | | | | | | | +--Andreprevotia (1) | | | | | | | | | +--Andreprevotia lacus DSM 23236 (1) | | | | | | | +--Neisseriaceae (8) | | | | | | | +--Aquitalea magnusonii (1) | | | | | | | +--Pseudogulbenkiania sp. NH8B (1) | | | | | | | +--Chromobacterium aquaticum (1) | | | | | | | +--Chromobacterium violaceum ATCC 12472 (1) | | | | | | | +--Neisseriaceae bacterium IGB-41 (1) | | | | | | | +--Laribacter hongkongensis HLHK9 (1) | | | | | | | +--Vitreoscilla filiformis (1) | | | | | | | +--Crenobacter luteus (1) | | | | | +--[Polyangium] brachysporum (2) | | | | | +--Nitrosomonadales (30) | | | | | | | +--Methylophilaceae (1) | | | | | | | | | +--Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 (1) | | | | | | | +--Methylophilales bacterium RIFCSPHIGHO2_02_FULL_57_10 (1) | | | | | | | +--Gallionellales bacterium RIFOXYB12_FULL_54_9 (1) | | | | | | | +--Gallionellales bacterium RIFCSPLOWO2_02_FULL_57_47 (1) | | | | | | | +--Thiobacillaceae (4) | | | | | | | | | +--Thiobacillus sp. 65-1059 (1) | | | | | | | | | +--Thiobacillus sp. 65-29 (1) | | | | | | | | | +--Thiobacillus sp. GWE1_62_9 (1) | | | | | | | | | +--Thiobacillus sp. SCN 63-57 (1) | | | | | | | +--Gallionellales bacterium RIFCSPLOWO2_12_FULL_59_22 (1) | | | | | | | +--Gallionellales bacterium GWA2_60_18 (1) | | | | | | | +--Gallionellales bacterium RBG_16_57_15 (1) | | | | | | | +--Gallionellales bacterium GWA2_60_142 (1) | | | | | | | +--Nitrosomonadaceae (14) | | | | | | | | | +--Nitrosomonas eutropha C91 (2) | | | | | | | | | +--Nitrosospira multiformis ATCC 25196 (2) | | | | | | | | | +--Nitrosomonas communis (1) | | | | | | | | | +--Nitrosomonas (1) | | | | | | | | | | | +--Nitrosomonas cryotolerans ATCC 49181 (1) | | | | | | | | | +--Nitrosovibrio sp. Nv17 (1) | | | | | | | | | +--Nitrosospira sp. 56-18 (1) | | | | | | | | | +--Nitrosospira briensis (1) | | | | | | | | | +--Nitrosospira sp. NpAV (1) | | | | | | | | | +--Nitrosospira sp. Nsp11 (1) | | | | | | | | | +--Nitrosomonas sp. AL212 (1) | | | | | | | | | +--Nitrosomonas europaea ATCC 19718 (1) | | | | | | | | | +--Nitrosomonas sp. Is79A3 (1) | | | | | | | +--Gallionellales bacterium RIFCSPLOWO2_02_60_31 (1) | | | | | | | +--Gallionellales bacterium RIFCSPHIGHO2_02_FULL_57_16 (1) | | | | | | | +--Gallionellales bacterium GWA2_59_43 (1) | | | | | | | +--Gallionellales bacterium RBG_16_56_9 (1) | | | | | +--Hydrogenophilales (7) | | | | | +--Hydrogenophilaceae (7) | | | | | +--Thiobacillus sp. SCN 65-179 (1) | | | | | +--Thiobacillus sp. SCN 64-317 (1) | | | | | +--Thiobacillus sp. SCN 63-374 (1) | | | | | +--Thiobacillus sp. SCN 64-35 (1) | | | | | +--Thiobacillus denitrificans (1) | | | | | +--Thiobacillus denitrificans ATCC 25259 (2) | | | +--unclassifiedProteobacteria (5) | | | | | +--Proteobacteria bacterium ST_bin12 (1) | | | | | +--Proteobacteria bacterium CG1_02_64_396 (1) | | | | | +--Proteobacteria bacterium SG_bin4 (1) | | | | | +--Proteobacteria bacterium HN_bin10 (1) | | | | | +--Proteobacteria bacterium ST_bin16 (1) | | | +--Candidatus Muproteobacteria bacterium RBG_19FT_COMBO_61_10 (1) | | | +--Candidatus Muproteobacteria bacterium RBG_16_64_10 (1) | | | +--delta/epsilonsubdivisions (3) | | | | | +--Deltaproteobacteria (3) | | | | | +--Myxococcales (3) | | | | | +--Cystobacterineae (3) | | | | | +--Archangiaceae (1) | | | | | | | +--Cystobacter (1) | | | | | | | +--Cystobacter fuscus DSM 2262 (1) | | | | | +--Myxococcaceae (2) | | | | | +--Myxococcus (1) | | | | | | | +--Myxococcus stipitatus DSM 14675 (1) | | | | | +--Corallococcus (1) | | | | | +--Corallococcus coralloides DSM 2259 (1) | | | +--Zetaproteobacteria (1) | | | | | +--Mariprofundales (1) | | | | | +--Mariprofundaceae (1) | | | | | +--Mariprofundus ferrooxydans PV-1 (1) | | | +--Gammaproteobacteria (254) | | | | | +--unclassifiedGammaproteobacteria (18) | | | | | | | +--Competibacteraceae (2) | | | | | | | | | +--CandidatusCompetibacter (1) | | | | | | | | | | | +--Candidatus Competibacter denitrificans Run_A_D11 (1) | | | | | | | | | +--CandidatusContendobacter (1) | | | | | | | | | +--Candidatus Contendobacter odensis Run_B_J11 (1) | | | | | | | +--Candidatus Thioglobus autotrophicus (1) | | | | | | | +--Solemya velesiana gill symbiont (1) | | | | | | | +--Gammaproteobacteria bacterium LUC14_002_19_P1 (1) | | | | | | | +--Solemya elarraichensis gill symbiont (1) | | | | | | | +--Gammaproteobacteria bacterium RIFOXYD12_FULL_61_37 (1) | | | | | | | +--Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_56_15 (1) | | | | | | | +--Sedimenticola thiotaurini (1) | | | | | | | +--Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22 (1) | | | | | | | +--Gammaproteobacteria bacterium SG8_47 (1) | | | | | | | +--endosymbiont of unidentified scaly snail isolate Monju (1) | | | | | | | +--Thiolapillus brandeum (1) | | | | | | | +--Gammaproteobacteria bacterium SG8_11 (1) | | | | | | | +--sulfur-oxidizingsymbionts (2) | | | | | | | | | +--Candidatus Thiodiazotropha endoloripes (1) | | | | | | | | | +--Candidatus Thiodiazotropha endolucinida (1) | | | | | | | +--Gammaproteobacteria bacterium SG8_30 (1) | | | | | | | +--CandidatusThioglobus (1) | | | | | | | +--Candidatus Thioglobus singularis PS1 (1) | | | | | +--Solemya velum gill symbiont (1) | | | | | +--Methylococcales (3) | | | | | | | +--Methylococcaceae (3) | | | | | | | +--Methylococcus capsulatus str. Bath (2) | | | | | | | +--Methylomagnum ishizawai (1) | | | | | +--Immundisolibacterales (1) | | | | | | | +--Immundisolibacteraceae (1) | | | | | | | +--Immundisolibacter cernigliae (1) | | | | | +--endosymbiont of Tevnia jerichonana (vent Tica) (1) | | | | | +--Bathymodiolus thermophilus thioautotrophic gill symbiont (1) | | | | | +--Xanthomonadales (81) | | | | | | | +--Xanthomonadales bacterium 63-13 (1) | | | | | | | +--Rhodanobacteraceae (27) | | | | | | | | | +--Luteibacter sp. UNCMF366Tsu5.1 (1) | | | | | | | | | +--Rhodanobacter sp. Soil772 (2) | | | | | | | | | +--Rhodanobacter sp. 115 (1) | | | | | | | | | +--Rhodanobacter sp. C06 (2) | | | | | | | | | +--Frateuria sp. Soil773 (1) | | | | | | | | | +--Oleiagrimonas soli (1) | | | | | | | | | +--Dyella jiangningensis (2) | | | | | | | | | +--Rhodanobacter sp. C03 (2) | | | | | | | | | +--Rhodanobacter sp. SCN 67-45 (1) | | | | | | | | | +--Rhodanobacter sp. SCN 69-32 (1) | | | | | | | | | +--Frateuria (1) | | | | | | | | | | | +--Frateuria aurantia DSM 6220 (1) | | | | | | | | | +--Rhodanobacter sp. FW510-R10 (2) | | | | | | | | | +--Luteibacter sp. 22Crub2.1 (1) | | | | | | | | | +--Rhodanobacter sp. OK091 (1) | | | | | | | | | +--Rhodanobacter sp. SCN 66-43 (1) | | | | | | | | | +--Luteibacter (1) | | | | | | | | | | | +--Luteibacter rhizovicinus DSM 16549 (1) | | | | | | | | | +--Rhodanobacter sp. B05 (1) | | | | | | | | | +--Rhodanobacter (2) | | | | | | | | | | | +--Rhodanobacter fulvus Jip2 (1) | | | | | | | | | | | +--Rhodanobacter spathiphylli B39 (1) | | | | | | | | | +--Dokdonella (1) | | | | | | | | | | | +--Dokdonella koreensis DS-123 (1) | | | | | | | | | +--Rhodanobacter sp. B04 (2) | | | | | | | +--Sinobacteraceae (1) | | | | | | | | | +--Steroidobacter denitrificans (1) | | | | | | | +--Xanthomonadales bacterium RIFOXYA1_FULL_69_10 (1) | | | | | | | +--Xanthomonadaceae (51) | | | | | | | +--Dyella sp. ATSB10 (1) | | | | | | | +--Xanthomonas translucens pv. undulosa (1) | | | | | | | +--Pseudoxanthomonas sp. Root65 (1) | | | | | | | +--Xanthomonas sp. Mitacek01 (1) | | | | | | | +--Pseudoxanthomonas suwonensis 11-1 (1) | | | | | | | +--Lysobacter enzymogenes (2) | | | | | | | +--Stenotrophomonas chelatiphaga (1) | | | | | | | +--Luteimonas sp. JM171 (1) | | | | | | | +--Xylella taiwanensis (1) | | | | | | | +--Lysobacter sp. Root96 (1) | | | | | | | +--Lysobacter sp. Root494 (1) | | | | | | | +--Xanthomonas (1) | | | | | | | | | +--Xanthomonas albilineans GPE PC73 (1) | | | | | | | +--Stenotrophomonas sp. LM091 (1) | | | | | | | +--Stenotrophomonas terrae (1) | | | | | | | +--Pseudoxanthomonas dokdonensis (1) | | | | | | | +--Xanthomonas oryzae pv. oryzae KACC10331 (1) | | | | | | | +--Stenotrophomonas daejeonensis (1) | | | | | | | +--Stenotrophomonas sp. Leaf70 (1) | | | | | | | +--Pseudoxanthomonas spadix BD-a59 (1) | | | | | | | +--Luteibacter yeojuensis (1) | | | | | | | +--Stenotrophomonas sp. BIIR7 (1) | | | | | | | +--Pseudoxanthomonas suwonensis (1) | | | | | | | +--Stenotrophomonas panacihumi (1) | | | | | | | +--Stenotrophomonas (3) | | | | | | | | | +--Stenotrophomonas maltophilia (1) | | | | | | | | | +--Stenotrophomonas maltophilia R551-3 (1) | | | | | | | | | +--Stenotrophomonasmaltophiliagroup (1) | | | | | | | | | +--Stenotrophomonas maltophilia SKK35 (1) | | | | | | | +--Lysobacter sp. ZS79 (1) | | | | | | | +--Xanthomonas campestris pv. campestris str. ATCC 33913 (1) | | | | | | | +--Arenimonas (5) | | | | | | | | | +--Arenimonas donghaensis DSM 18148 = HO3-R19 (1) | | | | | | | | | +--Arenimonas oryziterrae DSM 21050 = YC6267 (1) | | | | | | | | | +--Arenimonas composti TR7-09 = DSM 18010 (1) | | | | | | | | | +--Arenimonas malthae CC-JY-1 (1) | | | | | | | | | +--Arenimonas metalli CF5-1 (1) | | | | | | | +--Pseudoxanthomonas sp. P15 (1) | | | | | | | +--Lysobacter sp. A03 (1) | | | | | | | +--Luteimonas sp. FCS-9 (1) | | | | | | | +--Xanthomonas fragariae (1) | | | | | | | +--Stenotrophomonas koreensis (1) | | | | | | | +--Lysobacter gummosus (2) | | | | | | | +--unclassifiedXanthomonadaceae (1) | | | | | | | | | +--Xanthomonadaceae bacterium SCN 69-320 (1) | | | | | | | +--Lysobacter antibioticus (2) | | | | | | | +--Lysobacter (7) | | | | | | | +--Lysobacter daejeonensis GH1-9 (1) | | | | | | | +--Lysobacter concretionis Ko07 = DSM 16239 (1) | | | | | | | +--Lysobacter capsici AZ78 (2) | | | | | | | +--Lysobacter dokdonensis DS-58 (1) | | | | | | | +--Lysobacter defluvii IMMIB APB-9 = DSM 18482 (1) | | | | | | | +--Lysobacter spongiicola DSM 21749 (1) | | | | | +--Chromatiales (28) | | | | | | | +--Ectothiorhodospiraceae (15) | | | | | | | | | +--Thiorhodospira sibirica ATCC 700588 (1) | | | | | | | | | +--Alkalilimnicola ehrlichii MLHE-1 (2) | | | | | | | | | +--Thioalkalivibrio sulfidophilus HL-EbGr7 (1) | | | | | | | | | +--Thioalkalivibrio denitrificans (1) | | | | | | | | | +--Halorhodospira (1) | | | | | | | | | | | +--Halorhodospira halochloris str. A (1) | | | | | | | | | +--Thioalkalivibrio (1) | | | | | | | | | | | +--Thioalkalivibrio nitratireducens DSM 14787 (1) | | | | | | | | | +--Nitrococcus mobilis Nb-231 (2) | | | | | | | | | +--Spiribacter (1) | | | | | | | | | | | +--Spiribacter salinus M19-40 (1) | | | | | | | | | +--Thioalkalivibrio halophilus (1) | | | | | | | | | +--Spiribacter curvatus (1) | | | | | | | | | +--Thioalkalivibrio sp. K90mix (1) | | | | | | | | | +--Ectothiorhodospira sp. PHS-1 (2) | | | | | | | +--Chromatiaceae (10) | | | | | | | | | +--Thiorhodococcus drewsii AZ1 (1) | | | | | | | | | +--Candidatus Tenderia electrophaga (1) | | | | | | | | | +--Thiocapsa sp. KS1 (1) | | | | | | | | | +--Allochromatium vinosum DSM 180 (1) | | | | | | | | | +--Thiohalocapsa (1) | | | | | | | | | | | +--uncultured Thiohalocapsa sp. PB-PSB1 (1) | | | | | | | | | +--Thiocapsa marina 5811 (1) | | | | | | | | | +--Thiorhodovibrio sp. 970 (1) | | | | | | | | | +--Marichromatium purpuratum 984 (1) | | | | | | | | | +--Thiocystis violascens DSM 198 (1) | | | | | | | | | +--Thioflavicoccus (1) | | | | | | | | | +--Thioflavicoccus mobilis 8321 (1) | | | | | | | +--Halothiobacillaceae (3) | | | | | | | +--Halothiobacillus sp. XI15 (1) | | | | | | | +--Halothiobacillus neapolitanus c2 (1) | | | | | | | +--Halothiobacillus sp. LS2 (1) | | | | | +--Thiotrichales (19) | | | | | | | +--Thiotrichaceae (8) | | | | | | | | | +--Thiothrix nivea DSM 5205 (1) | | | | | | | | | +--Thiothrix eikelboomii (2) | | | | | | | | | +--Achromatium sp. WMS1 (1) | | | | | | | | | +--Thiothrix lacustris (3) | | | | | | | | | +--Achromatium sp. WMS3 (1) | | | | | | | +--unclassifiedThiotrichales (1) | | | | | | | | | +--Thiotrichales bacterium SG8_50 (1) | | | | | | | +--Piscirickettsiaceae (10) | | | | | | | +--Methylophaga sp. 41_12_T18 (1) | | | | | | | +--Cycloclasticus sp. symbiont of Poecilosclerida sp. N (1) | | | | | | | +--Cycloclasticus sp. P1 (1) | | | | | | | +--Methylophaga thiooxydans DMS010 (1) | | | | | | | +--Cycloclasticus sp. Phe_18 (1) | | | | | | | +--Methylophaga sp. JAM1 (1) | | | | | | | +--Methylophaga sp. JAM7 (1) | | | | | | | +--Cycloclasticus sp. symbiont of Poecilosclerida sp. M (1) | | | | | | | +--Methylophaga aminisulfidivorans MP (1) | | | | | | | +--Methylophaga (1) | | | | | | | +--Methylophaga lonarensis MPL (1) | | | | | +--Acidithiobacillales (4) | | | | | | | +--Acidithiobacillaceae (4) | | | | | | | +--Acidithiobacillus ferrooxidans ATCC 23270 (1) | | | | | | | +--Acidithiobacillus caldus SM-1 (1) | | | | | | | +--Acidithiobacillus sp. GGI-221 (1) | | | | | | | +--Acidithiobacillus thiooxidans (1) | | | | | +--Oceanospirillales (12) | | | | | | | +--Oceanospirillum multiglobuliferum (1) | | | | | | | +--Halomonadaceae (6) | | | | | | | | | +--Kushneria marisflavi (1) | | | | | | | | | +--Halomonas sp. 1513 (1) | | | | | | | | | +--Halomonadaceae bacterium T82-2 (1) | | | | | | | | | +--Halomonas (2) | | | | | | | | | | | +--Halomonas ilicicola DSM 19980 (1) | | | | | | | | | | | +--Halomonas anticariensis FP35 = DSM 16096 (1) | | | | | | | | | +--Kushneria sp. YCWA18 (1) | | | | | | | +--Oceanospirillum linum (1) | | | | | | | +--Oceanospirillaceae (1) | | | | | | | | | +--Marinospirillum (1) | | | | | | | | | +--Marinospirillum alkaliphilum DSM 21637 (1) | | | | | | | +--Alcanivoracaceae (2) | | | | | | | | | +--Alcanivorax sp. W11-5 (1) | | | | | | | | | +--Alcanivorax sp. Nap_24 (1) | | | | | | | +--unclassifiedOceanospirillales (1) | | | | | | | +--SUP05cluster (1) | | | | | | | +--uncultured SUP05 cluster bacterium (1) | | | | | +--Pseudomonadales (85) | | | | | +--unclassifiedPseudomonadales (2) | | | | | | | +--Pseudomonadales bacterium RIFCSPHIGHO2_02_FULL_60_43 (1) | | | | | | | +--Pseudomonadales bacterium GWC1_66_9 (1) | | | | | +--Pseudomonadaceae (80) | | | | | | | +--Pseudomonas lutea (1) | | | | | | | +--Pseudomonas sp. HUK17 (1) | | | | | | | +--Pseudomonas sp. G5(2012) (1) | | | | | | | +--Pseudomonas sp. M30-35 (1) | | | | | | | +--Pseudomonas sp. Chol1 (1) | | | | | | | +--Pseudomonas putida W619 (1) | | | | | | | +--Pseudomonas alkylphenolia (1) | | | | | | | +--Pseudomonas aeruginosa PAO1 (1) | | | | | | | +--Pseudomonas sp. 1 R 17 (1) | | | | | | | +--Pseudomonas sp. URMO17WK12:I11 (1) | | | | | | | +--Pseudomonas sp. StFLB209 (1) | | | | | | | +--Serpens flexibilis (1) | | | | | | | +--Pseudomonas sp. UW4 (1) | | | | | | | +--Azotobacter vinelandii DJ (2) | | | | | | | +--Pseudomonas sp. ABAC61 (1) | | | | | | | +--Pseudomonas sp. VI4.1 (1) | | | | | | | +--Pseudomonas saudiphocaensis (1) | | | | | | | +--Pseudomonas mendocina ymp (2) | | | | | | | +--Pseudomonas entomophila L48 (2) | | | | | | | +--Pseudomonas fluorescens SBW25 (1) | | | | | | | +--Pseudomonas putida CSV86 (1) | | | | | | | +--Pseudomonas stutzeri A1501 (2) | | | | | | | +--Pseudomonas sp. FeS53a (1) | | | | | | | +--Pseudomonas putida (1) | | | | | | | +--Pseudomonas syringae pv. tomato str. DC3000 (2) | | | | | | | +--Pseudomonas sp. M47T1 (1) | | | | | | | +--Pseudomonas floridensis (1) | | | | | | | +--Pseudomonas (17) | | | | | | | | | +--Pseudomonassyringaegroup (2) | | | | | | | | | | | +--Pseudomonas cichorii JBC1 (1) | | | | | | | | | | | +--Pseudomonassyringaegroupgenomosp.1 (1) | | | | | | | | | | | +--Pseudomonassyringae (1) | | | | | | | | | | | +--Pseudomonassyringaegrouppathovarsincertaesedis (1) | | | | | | | | | | | +--Pseudomonas syringae pv. actinidiae ICMP 19096 (1) | | | | | | | | | +--Pseudomonasstutzerigroup (1) | | | | | | | | | | | +--Pseudomonas balearica DSM 6083 (1) | | | | | | | | | +--Pseudomonasfluorescensgroup (2) | | | | | | | | | | | +--Pseudomonas fluorescens F113 (1) | | | | | | | | | | | +--Pseudomonas fluorescens ABAC62 (1) | | | | | | | | | +--Pseudomonas syringae pv. syringae B728a (1) | | | | | | | | | +--Pseudomonasaeruginosagroup (3) | | | | | | | | | | | +--Pseudomonasoleovorans/pseudoalcaligenesgroup (1) | | | | | | | | | | | | | +--Pseudomonas pseudoalcaligenes KF707 = NBRC 110670 (1) | | | | | | | | | | | +--Pseudomonas resinovorans NBRC 106553 (1) | | | | | | | | | | | +--Pseudomonas alcaligenes NBRC 14159 (1) | | | | | | | | | +--Pseudomonas taeanensis MS-3 (1) | | | | | | | | | +--Pseudomonas knackmussii B13 (1) | | | | | | | | | +--Pseudomonas syringae pv. spinaceae (1) | | | | | | | | | +--Pseudomonasputidagroup (1) | | | | | | | | | | | +--Pseudomonas putida S11 (1) | | | | | | | | | +--Pseudomonas caspiana (1) | | | | | | | | | +--Pseudomonaspertucinogenagroup (1) | | | | | | | | | | | +--Pseudomonas denitrificans ATCC 13867 (1) | | | | | | | | | +--Pseudomonas sp. Lz4W (1) | | | | | | | | | +--Pseudomonas syringae pv. pisi str. 1704B (1) | | | | | | | +--Pseudomonas sp. 21C1 (1) | | | | | | | +--Pseudomonas sp. J237 (1) | | | | | | | +--Pseudomonas oryzihabitans (1) | | | | | | | +--Pseudomonas sp. Bc-h (1) | | | | | | | +--Pseudomonas fluorescens Pf-5 (2) | | | | | | | +--Pseudomonas fulva 12-X (1) | | | | | | | +--Pseudomonas sp. 5 (1) | | | | | | | +--Oblitimonas alkaliphila (1) | | | | | | | +--Pseudomonas brenneri (1) | | | | | | | +--Pseudomonas fluorescens HK44 (1) | | | | | | | +--Pseudomonas syringae (1) | | | | | | | +--Pseudomonas sp. EGD-AK9 (1) | | | | | | | +--Pseudomonas batumici (1) | | | | | | | +--Pseudomonas sp. GM78 (1) | | | | | | | +--Pseudomonas monteilii (1) | | | | | | | +--Pseudomonas putida KT2440 (2) | | | | | | | +--Pseudomonas chlororaphis subsp. aureofaciens 30-84 (1) | | | | | | | +--Pseudomonas agarici (1) | | | | | | | +--Pseudomonas sp. TTU2014-080ASC (1) | | | | | | | +--Pseudomonas cremoricolorata (1) | | | | | | | +--Pseudomonas stutzeri (1) | | | | | | | +--Pseudomonas sp. MF4836 (1) | | | | | | | +--Pseudomonas aeruginosa PA7 (1) | | | | | | | +--Pseudomonas sp. HPB0071 (1) | | | | | | | +--Pseudomonas rhizosphaerae (1) | | | | | | | +--Pseudomonas fuscovaginae (1) | | | | | | | +--Pseudomonas sp. BAY1663 (1) | | | | | | | +--Pseudomonas hussainii (1) | | | | | | | +--Pseudomonas fluorescens Pf0-1 (1) | | | | | +--Moraxellaceae (2) | | | | | | | +--Alkanindiges sp. H1 (1) | | | | | | | +--Acinetobacter (1) | | | | | | | +--Acinetobacter brisouii CIP 110357 (1) | | | | | +--Ventosimonadaceae (1) | | | | | +--Ventosimonas gracilis (1) | | | +--Hydrogenophilalia (2) | | | | | +--Hydrogenophilales (2) | | | | | +--Hydrogenophilaceae (1) | | | | | | | +--Hydrogenophilaceae bacterium CG1_02_62_390 (1) | | | | | +--Hydrogenophilales bacterium RIFOXYD1_FULL_62_11 (1) | | | +--Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18 (1) | +--Armatimonadetes (1) | | | +--Fimbriimonas ginsengisoli Gsoil 348 (1) | +--PVCgroup (7) | | | +--Planctomycetes (7) | | | +--Planctomycetes bacterium RBG_13_62_9 (1) | | | +--Planctomycetia (6) | | | +--Planctomycetales (6) | | | +--Gemmataceae (2) | | | | | +--Fimbriiglobus ruber (1) | | | | | +--Gemmata sp. SH-PL17 (1) | | | +--unclassifiedPlanctomycetales (1) | | | | | +--Planctomycetales bacterium 71-10 (1) | | | +--Isosphaeraceae (2) | | | | | +--Singulisphaera (1) | | | | | | | +--Singulisphaera acidiphila DSM 18658 (1) | | | | | +--Paludisphaera borealis (1) | | | +--Planctomycetaceae (1) | | | +--Planctomyces sp. SH-PL62 (1) | +--Terrabacteriagroup (15) | | | +--Actinobacteria (13) | | | | | +--Actinobacteria (13) | | | | | +--Micromonosporales (3) | | | | | | | +--Micromonosporaceae (3) | | | | | | | +--Actinoplanes (3) | | | | | | | +--Actinoplanes friuliensis DSM 7358 (2) | | | | | | | +--Actinoplanes missouriensis 431 (1) | | | | | +--Propionibacteriales (2) | | | | | | | +--Nocardioidaceae (2) | | | | | | | +--Mumia flava (1) | | | | | | | +--Nocardioides sp. Root79 (1) | | | | | +--Corynebacteriales (1) | | | | | | | +--Mycobacteriaceae (1) | | | | | | | +--Mycobacterium sp. E787 (1) | | | | | +--Pseudonocardiales (7) | | | | | +--Pseudonocardiaceae (7) | | | | | +--Amycolatopsis (2) | | | | | | | +--Amycolatopsis methanolica 239 (2) | | | | | +--Saccharothrix (1) | | | | | | | +--Saccharothrix espanaensis DSM 44229 (1) | | | | | +--Actinophytocola xanthii (1) | | | | | +--Kutzneria (2) | | | | | | | +--Kutzneria albida DSM 43870 (2) | | | | | +--Pseudonocardia sp. 73-21 (1) | | | +--Armatimonadetes (1) | | | | | +--Armatimonadetes bacterium 55-13 (1) | | | +--Cyanobacteria/Melainabacteriagroup (1) | | | +--Cyanobacteria (1) | | | +--Nostocales (1) | | | +--Tolypothrichaceae (1) | | | +--Tolypothrix (1) | | | +--Tolypothrix campylonemoides VB511288 (1) | +--Nitrospirae (4) | +--Nitrospirae bacterium GWC2_57_9 (1) | +--Nitrospirae bacterium GWD2_57_9 (1) | +--Nitrospirae bacterium GWC2_56_14 (1) | +--Nitrospirae bacterium RBG_19FT_COMBO_55_12 (1)