# Species tree for RF00555 # Generated from Rfam version 14.10 | +--Bacteria (293) | +--Actinobacteria (1) | | | +--Actinobacteridae (1) | | | +--Actinomycetales (1) | | | +--Corynebacterineae (1) | | | +--Mycobacteriaceae (1) | | | +--Mycobacterium abscessus (1) | +--Terrabacteriagroup (144) | | | +--Actinobacteria (2) | | | | | +--Actinobacteria (2) | | | | | +--Streptomycetales (1) | | | | | | | +--Streptomycetaceae (1) | | | | | | | +--Streptomyces sp. WAC00263 (1) | | | | | +--Corynebacteriales (1) | | | | | +--Mycobacteriaceae (1) | | | | | +--Mycobacterium (1) | | | | | +--Mycobacteriumchelonaegroup (1) | | | | | +--Mycobacteriumabscessussubgroup (1) | | | | | +--Mycobacterium abscessus subsp. abscessus (1) | | | +--Firmicutes (142) | | | +--Bacilli (141) | | | | | +--Lactobacillales (104) | | | | | | | +--Leuconostocaceae (4) | | | | | | | | | +--Leuconostoc (2) | | | | | | | | | | | +--Leuconostoc gelidum JB7 (1) | | | | | | | | | | | +--Leuconostoc pseudomesenteroides PS12 (1) | | | | | | | | | +--Fructobacillus sp. EFB-N1 (1) | | | | | | | | | +--Leuconostoc sp. DORA_2 (1) | | | | | | | +--Carnobacteriaceae (9) | | | | | | | | | +--Atopostipes (1) | | | | | | | | | | | +--Atopostipes suicloacalis DSM 15692 (1) | | | | | | | | | +--Marinilactibacillus sp. 15R (1) | | | | | | | | | +--Alkalibacterium sp. AK22 (1) | | | | | | | | | +--Carnobacterium (3) | | | | | | | | | | | +--Carnobacterium inhibens subsp. gilichinskyi (1) | | | | | | | | | | | +--Carnobacterium maltaromaticum LMA28 (1) | | | | | | | | | | | +--Carnobacterium divergens DSM 20623 (1) | | | | | | | | | +--Alloiococcus (1) | | | | | | | | | | | +--Alloiococcus otitis ATCC 51267 (1) | | | | | | | | | +--Dolosigranulum (1) | | | | | | | | | | | +--Dolosigranulum pigrum ATCC 51524 (1) | | | | | | | | | +--Carnobacterium sp. CP1 (1) | | | | | | | +--Streptococcaceae (22) | | | | | | | | | +--Streptococcus pantholopis (1) | | | | | | | | | +--Streptococcus cuniculi (1) | | | | | | | | | +--Streptococcus sp. DD10 (1) | | | | | | | | | +--Streptococcus sp. DD13 (1) | | | | | | | | | +--Streptococcus (8) | | | | | | | | | | | +--Streptococcus agalactiae LMG 14747 (1) | | | | | | | | | | | +--Streptococcus lutetiensis 033 (1) | | | | | | | | | | | +--Streptococcusanginosusgroup (1) | | | | | | | | | | | | | +--Streptococcus intermedius B196 (1) | | | | | | | | | | | +--Streptococcusdysgalactiaegroup (1) | | | | | | | | | | | | | +--Streptococcusdysgalactiae (1) | | | | | | | | | | | | | +--Streptococcus dysgalactiae subsp. equisimilis RE378 (1) | | | | | | | | | | | +--Streptococcus pyogenes serotype M1 (1) | | | | | | | | | | | +--Streptococcus iniae IUSA1 (1) | | | | | | | | | | | +--Streptococcus ratti FA-1 = DSM 20564 (1) | | | | | | | | | | | +--Streptococcus pneumoniae 2070335 (1) | | | | | | | | | +--Streptococcus sp. HSISM1 (1) | | | | | | | | | +--Streptococcus sp. DD12 (1) | | | | | | | | | +--Streptococcus sp. 'caviae' (1) | | | | | | | | | +--Streptococcus sp. HSISB1 (2) | | | | | | | | | +--Floricoccus tropicus (1) | | | | | | | | | +--Streptococcus varani (1) | | | | | | | | | +--Streptococcus sp. DD11 (1) | | | | | | | | | +--Lactococcus (1) | | | | | | | | | | | +--Lactococcuslactis (1) | | | | | | | | | | | +--Lactococcus lactis subsp. cremoris TIFN6 (1) | | | | | | | | | +--Streptococcus sp. DORA_10 (1) | | | | | | | +--Enterococcaceae (7) | | | | | | | | | +--Enterococcus sp. 9D6_DIV0238 (1) | | | | | | | | | +--Vagococcus (1) | | | | | | | | | | | +--Vagococcus lutrae LBD1 (1) | | | | | | | | | +--Enterococcus sp. 6C8_DIV0013 (1) | | | | | | | | | +--Enterococcus sp. 7F3_DIV0205 (1) | | | | | | | | | +--Enterococcus (1) | | | | | | | | | | | +--Enterococcus haemoperoxidus ATCC BAA-382 (1) | | | | | | | | | +--Catellicoccus (1) | | | | | | | | | | | +--Catellicoccus marimammalium M35/04/3 (1) | | | | | | | | | +--Enterococcus sp. 4G2_DIV0659 (1) | | | | | | | +--Lactobacillaceae (58) | | | | | | | | | +--Lactobacillus mixtipabuli (1) | | | | | | | | | +--Lactobacillus (52) | | | | | | | | | | | +--Lactobacillus brantae DSM 23927 (1) | | | | | | | | | | | +--Lactobacillus kalixensis DSM 16043 (1) | | | | | | | | | | | +--Lactobacillus collinoides DSM 20515 = JCM 1123 (1) | | | | | | | | | | | +--Lactobacillus cacaonum DSM 21116 (1) | | | | | | | | | | | +--Lactobacillus kimchicus JCM 15530 (1) | | | | | | | | | | | +--Lactobacillus algidus DSM 15638 (1) | | | | | | | | | | | +--Lactobacillus florum 8D (1) | | | | | | | | | | | +--Lactobacillus concavus DSM 17758 (1) | | | | | | | | | | | +--Lactobacillus agilis DSM 20509 (1) | | | | | | | | | | | +--Lactobacillus ozensis DSM 23829 = JCM 17196 (1) | | | | | | | | | | | +--Lactobacillus buchneri CD034 (1) | | | | | | | | | | | +--Lactobacillus capillatus DSM 19910 (1) | | | | | | | | | | | +--Lactobacillus perolens DSM 12744 (1) | | | | | | | | | | | +--Lactobacillus floricola DSM 23037 = JCM 16512 (1) | | | | | | | | | | | +--Lactobacillus oeni DSM 19972 (1) | | | | | | | | | | | +--Lactobacillus odoratitofui DSM 19909 = JCM 15043 (1) | | | | | | | | | | | +--Lactobacillus rossiae DSM 15814 (1) | | | | | | | | | | | +--Lactobacilluskefiranofaciens (1) | | | | | | | | | | | | | +--Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 = JCM 8572 (1) | | | | | | | | | | | +--Lactobacillus composti DSM 18527 = JCM 14202 (1) | | | | | | | | | | | +--Lactobacillus hayakitensis DSM 18933 = JCM 14209 (1) | | | | | | | | | | | +--Lactobacillus nasuensis JCM 17158 (1) | | | | | | | | | | | +--Lactobacillus ghanensis DSM 18630 (1) | | | | | | | | | | | +--Lactobacillus lindneri DSM 20690 = JCM 11027 (1) | | | | | | | | | | | +--Lactobacillus manihotivorans DSM 13343 = JCM 12514 (1) | | | | | | | | | | | +--Lactobacillus parafarraginis F0439 (1) | | | | | | | | | | | +--Lactobacillus hominis DSM 23910 = CRBIP 24.179 (1) | | | | | | | | | | | +--Lactobacillus farraginis DSM 18382 = JCM 14108 (1) | | | | | | | | | | | +--Lactobacillus fabifermentans T30PCM01 (1) | | | | | | | | | | | +--Lactobacillus apodemi DSM 16634 = JCM 16172 (1) | | | | | | | | | | | +--Lactobacillus oryzae JCM 18671 (1) | | | | | | | | | | | +--Lactobacillus amylophilus DSM 20533 = JCM 1125 (1) | | | | | | | | | | | +--Lactobacilluscoryniformis (1) | | | | | | | | | | | | | +--Lactobacillus coryniformis subsp. coryniformis CECT 5711 (1) | | | | | | | | | | | +--Lactobacillus similis DSM 23365 = JCM 2765 (1) | | | | | | | | | | | +--Lactobacillus harbinensis DSM 16991 (1) | | | | | | | | | | | +--Lactobacillus saniviri JCM 17471 = DSM 24301 (1) | | | | | | | | | | | +--Lactobacillus bifermentans DSM 20003 (1) | | | | | | | | | | | +--Lactobacillus silagei JCM 19001 (1) | | | | | | | | | | | +--Lactobacillus tucceti DSM 20183 (1) | | | | | | | | | | | +--Lactobacillus camelliae DSM 22697 = JCM 13995 (1) | | | | | | | | | | | +--Lactobacillus thailandensis DSM 22698 = JCM 13996 (1) | | | | | | | | | | | +--Lactobacillus sharpeae JCM 1186 = DSM 20505 (1) | | | | | | | | | | | +--Lactobacillus fuchuensis DSM 14340 = JCM 11249 (1) | | | | | | | | | | | +--Lactobacillus diolivorans DSM 14421 (1) | | | | | | | | | | | +--Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160 (1) | | | | | | | | | | | +--Lactobacillus pasteurii DSM 23907 = CRBIP 24.76 (1) | | | | | | | | | | | +--Lactobacillus saerimneri 30a (1) | | | | | | | | | | | +--Lactobacillus shenzhenensis LY-73 (1) | | | | | | | | | | | +--Lactobacillus rennini DSM 20253 (1) | | | | | | | | | | | +--Lactobacillus dextrinicus DSM 20335 (1) | | | | | | | | | | | +--Lactobacillus graminis DSM 20719 (1) | | | | | | | | | | | +--Lactobacillus senioris DSM 24302 = JCM 17472 (1) | | | | | | | | | | | +--Lactobacillus vini DSM 20605 (1) | | | | | | | | | +--Lactobacillus curieae (1) | | | | | | | | | +--Lactobacillus mellifer (1) | | | | | | | | | +--Lactobacillus sp. wkB8 (1) | | | | | | | | | +--Lactobacillus mellis (1) | | | | | | | | | +--Lactobacillus allii (1) | | | | | | | +--Aerococcaceae (4) | | | | | | | +--Facklamia (3) | | | | | | | | | +--Facklamia languida CCUG 37842 (1) | | | | | | | | | +--Facklamia ignava CCUG 37419 (1) | | | | | | | | | +--Facklamia hominis CCUG 36813 (1) | | | | | | | +--Globicatella sp. HMSC072A10 (1) | | | | | +--Bacillales (37) | | | | | +--Staphylococcaceae (8) | | | | | | | +--Salinicoccus (1) | | | | | | | | | +--Salinicoccus alkaliphilus DSM 16010 (1) | | | | | | | +--Staphylococcus sp. NAM3COL9 (1) | | | | | | | +--Staphylococcus sp. HMSC078E07 (1) | | | | | | | +--Staphylococcus sp. HGB0015 (1) | | | | | | | +--Staphylococcus (4) | | | | | | | +--Staphylococcus massiliensis S46 (1) | | | | | | | +--Staphylococcus pettenkoferi VCU012 (1) | | | | | | | +--Staphylococcus chromogenes MU 970 (1) | | | | | | | +--Staphylococcus aureus C0673 (1) | | | | | +--Bacillaceae (23) | | | | | | | +--Bacillus glycinifermentans (1) | | | | | | | +--Virgibacillus sp. LM2416 (1) | | | | | | | +--Lentibacillus amyloliquefaciens (1) | | | | | | | +--Bacillus obstructivus (1) | | | | | | | +--Bacillus sp. FJAT-27997 (1) | | | | | | | +--Bacillus nakamurai (1) | | | | | | | +--Bacillus sp. VT-16-64 (1) | | | | | | | +--Bacillus sp. FJAT-27231 (1) | | | | | | | +--Bacillus sp. FJAT-21945 (1) | | | | | | | +--Anoxybacillus sp. BCO1 (1) | | | | | | | +--Virgibacillus massiliensis (1) | | | | | | | +--Bacillus sp. FJAT-22058 (1) | | | | | | | +--Bacillus gobiensis (1) | | | | | | | +--Bacillus sp. MUM 13 (1) | | | | | | | +--Bacillus weihaiensis (1) | | | | | | | +--Bacillus (1) | | | | | | | | | +--Bacillus coahuilensis p1.1.43 (1) | | | | | | | +--Bacillus sp. SJS (1) | | | | | | | +--Bacillus enclensis (1) | | | | | | | +--Domibacillus antri (1) | | | | | | | +--Pontibacillus (3) | | | | | | | | | +--Pontibacillus chungwhensis BH030062 (1) | | | | | | | | | +--Pontibacillus litoralis JSM 072002 (1) | | | | | | | | | +--Pontibacillus yanchengensis Y32 (1) | | | | | | | +--Bacillus sp. SA1-12 (1) | | | | | +--Listeriaceae (6) | | | | | +--Brochothrix (2) | | | | | | | +--Brochothrix campestris FSL F6-1037 (1) | | | | | | | +--Brochothrix thermosphacta DSM 20171 = FSL F6-1036 (1) | | | | | +--Listeria (3) | | | | | | | +--Listeria floridensis FSL S10-1187 (1) | | | | | | | +--Listeria fleischmannii subsp. coloradonensis (1) | | | | | | | +--Listeria aquatica FSL S10-1188 (1) | | | | | +--Listeriaceae bacterium FSL A5-0209 (1) | | | +--Tissierellia (1) | | | +--Tissierellales (1) | | | +--Peptoniphilaceae (1) | | | +--Peptoniphilus (1) | | | +--Peptoniphilus lacrimalis DNF00528 (1) | +--FCBgroup (1) | | | +--Bacteroidetes/Chlorobigroup (1) | | | +--Bacteroidetes (1) | | | +--Sphingobacteriia (1) | | | +--Sphingobacteriales (1) | | | +--Sphingobacteriaceae (1) | | | +--Sphingobacterium (1) | | | +--Sphingobacterium faecium PCAi_F2.5 (1) | +--Firmicutes (147) | +--Lactobacillales (95) | | | +--Carnobacteriaceae (2) | | | | | +--Carnobacterium sp. LMG 26642 (1) | | | | | +--Trichococcus sp. R210 (1) | | | +--Lactobacillaceae (39) | | | | | +--Lactobacillus plantarum WCFS1 (1) | | | | | +--Lactobacillus farciminis (1) | | | | | +--Lactobacillus casei ATCC 334 (2) | | | | | +--Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 (1) | | | | | +--Lactobacillus animalis (1) | | | | | +--Pediococcus argentinicus (1) | | | | | +--Lactobacillus salivarius UCC118 (2) | | | | | +--Lactobacillus sp. ASF360 (1) | | | | | +--Pediococcus pentosaceus ATCC 25745 (2) | | | | | +--Lactobacillus helveticus DPC 4571 (1) | | | | | +--Lactobacillus sanfranciscensis TMW 1.1304 (1) | | | | | +--Lactobacillus iners DSM 13335 (1) | | | | | +--Lactobacillus fructivorans (1) | | | | | +--Lactobacillus acidophilus NCFM (2) | | | | | +--Lactobacillus siliginis (1) | | | | | +--Lactobacillus johnsonii NCC 533 (2) | | | | | +--Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 (1) | | | | | +--Paralactobacillus selangorensis (1) | | | | | +--Pediococcus stilesii (1) | | | | | +--Lactobacillus rhamnosus MTCC 5462 (1) | | | | | +--Lactobacillus kunkeei (1) | | | | | +--Lactobacillus sp. EMML 3041 (1) | | | | | +--Lactobacillus ruminis ATCC 27782 (1) | | | | | +--Pediococcus acidilactici DSM 20284 (1) | | | | | +--Lactobacillus pobuzihii (1) | | | | | +--Lactobacillus sakei subsp. sakei 23K (2) | | | | | +--Lactobacillus brevis subsp. gravesensis ATCC 27305 (1) | | | | | +--Lactobacillus crispatus ST1 (1) | | | | | +--Pediococcus cellicola (1) | | | | | +--Lactobacillus acidipiscis (1) | | | | | +--Lactobacillus plantarum subsp. plantarum ST-III (1) | | | | | +--Lactobacillus backi (1) | | | | | +--Lactobacillus apis (1) | | | +--Streptococcaceae (37) | | | | | +--Streptococcus henryi (1) | | | | | +--Streptococcus pneumoniae SP19-BS75 (1) | | | | | +--Streptococcus phocae (1) | | | | | +--Streptococcus pyogenes MGAS10394 (1) | | | | | +--Streptococcus sp. oral taxon 056 str. F0418 (1) | | | | | +--Streptococcus ictaluri 707-05 (1) | | | | | +--Lactococcus lactis subsp. lactis Il1403 (1) | | | | | +--Streptococcus agalactiae NEM316 (1) | | | | | +--Streptococcus mutans UA159 (1) | | | | | +--Streptococcus macacae NCTC 11558 (1) | | | | | +--Lactococcus sp. MKFS47 (1) | | | | | +--Streptococcus thermophilus CNCM I-1630 (1) | | | | | +--Streptococcus pneumoniae SP6-BS73 (1) | | | | | +--Streptococcus mutans NN2025 (1) | | | | | +--Streptococcus sinensis (1) | | | | | +--Streptococcus suis 05ZYH33 (2) | | | | | +--Streptococcus uberis (1) | | | | | +--Streptococcus parauberis NCFD 2020 (1) | | | | | +--Lactococcus lactis subsp. cremoris MG1363 (1) | | | | | +--Streptococcus thermophilus LMG 18311 (1) | | | | | +--Streptococcus pneumoniae R6 (1) | | | | | +--Streptococcus infantis SK1302 (1) | | | | | +--Streptococcus uberis 0140J (1) | | | | | +--Streptococcus urinalis 2285-97 (1) | | | | | +--Streptococcus gallolyticus (1) | | | | | +--Streptococcus gordonii str. Challis substr. CH1 (1) | | | | | +--Streptococcus agalactiae 2603V/R (1) | | | | | +--Streptococcus equi subsp. zooepidemicus (1) | | | | | +--Streptococcus infantis SK970 (1) | | | | | +--Lactococcus garvieae Lg2 (1) | | | | | +--Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 (1) | | | | | +--Streptococcus thermophilus CNRZ1066 (1) | | | | | +--Streptococcus sanguinis SK36 (2) | | | | | +--Streptococcus pyogenes MGAS6180 (1) | | | | | +--Streptococcus pseudoporcinus LQ 940-04 (1) | | | +--Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 (1) | | | +--Enterococcaceae (7) | | | | | +--Pilibacter termitis (1) | | | | | +--Enterococcus faecalis V583 (1) | | | | | +--Enterococcus sp. CCM4360 (1) | | | | | +--Vagococcus penaei (1) | | | | | +--Enterococcus termitis (1) | | | | | +--Enterococcus sp. HAMBI 3055 (1) | | | | | +--Vagococcus teuberi (1) | | | +--Leuconostoc citreum KM20 (1) | | | +--Leuconostoc lactis (1) | | | +--Fructobacillus fructosus KCTC 3544 (1) | | | +--Aerococcaceae (6) | | | +--Aerococcus urinaehominis (1) | | | +--Aerococcus viridans ATCC 11563 (1) | | | +--Aerococcus urinae ACS-120-V-Col10a (1) | | | +--Eremococcus coleocola ACS-139-V-Col8 (1) | | | +--Abiotrophia defectiva ATCC 49176 (1) | | | +--Aerococcus christensenii (1) | +--Bacillales (52) | +--Staphylococcus carnosus (1) | +--Staphylococcus carnosus subsp. carnosus TM300 (1) | +--Staphylococcus pseudintermedius (1) | +--Staphylococcus saprophyticus (1) | +--Staphylococcus cohnii subsp. cohnii (1) | +--Staphylococcus aureus subsp. aureus Mu50 (1) | +--Staphylococcus simiae CCM 7213 (1) | +--Staphylococcus capitis (1) | +--Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 (2) | +--Staphylococcus succinus (1) | +--Staphylococcus epidermidis RP62A (2) | +--Listeriaceae (3) | | | +--Listeria grayi DSM 20601 (1) | | | +--Listeria monocytogenes (1) | | | +--Listeria monocytogenes EGD-e (1) | +--Bacillaceae (31) | | | +--Oceanobacillus iheyensis HTE831 (2) | | | +--Bacillus shackletonii (1) | | | +--Virgibacillus pantothenticus (1) | | | +--Bacillus sporothermodurans (1) | | | +--Bacillus amyloliquefaciens FZB42 (1) | | | +--Bacillus ginsengihumi (1) | | | +--Bacillus coagulans 36D1 (1) | | | +--Bacillus galactosidilyticus (1) | | | +--Bacillus atrophaeus 1942 (1) | | | +--Bacillus licheniformis ATCC 14580 (2) | | | +--Halobacillus halophilus DSM 2266 (1) | | | +--Bacillus badius (1) | | | +--Bacillus marisflavi (1) | | | +--Bacillus vietnamensis (1) | | | +--Bacillus thermoamylovorans (1) | | | +--Virgibacillus sp. CC-YMP-6 (1) | | | +--Bacillus litoralis (1) | | | +--Anoxybacillus flavithermus (1) | | | +--Bacillus smithii (1) | | | +--Virgibacillus chiguensis (1) | | | +--Bacillus koreensis (1) | | | +--Bacillus pumilus SAFR-032 (1) | | | +--Oceanobacillus oncorhynchi (1) | | | +--Bacillus sp. 2_A_57_CT2 (1) | | | +--Anoxybacillus flavithermus WK1 (1) | | | +--Bacillus subtilis subsp. subtilis str. 168 (1) | | | +--Virgibacillus necropolis (1) | | | +--Bacillus subtilis (1) | | | +--Aeribacillus pallidus (1) | +--Staphylococcus hyicus (1) | +--Staphylococcus haemolyticus JCSC1435 (2) | +--Staphylococcus microti (1) | +--Staphylococcus aureus subsp. aureus NCTC 8325 (1)