# Species tree for RF00428 # Generated from Rfam version 15.00 | +--Eukaryota (628) | +--Metazoa (603) | | | +--Chordata (603) | | | +--Craniata (603) | | | +--Vertebrata (603) | | | +--Euteleostomi (603) | | | +--Actinopterygii (1) | | | | | +--Chondrostei (1) | | | | | +--Acipenseriformes (1) | | | | | +--Acipenseridae (1) | | | | | +--Acipenser ruthenus (sterlet) (1) | | | +--Lepidosauria (3) | | | | | +--Squamata (3) | | | | | +--Scleroglossa (3) | | | | | +--Serpentes (3) | | | | | +--Colubroidea (3) | | | | | +--Elapidae (3) | | | | | +--Acanthophiinae (2) | | | | | | | +--Pseudonaja textilis (1) | | | | | | | +--Notechis scutatus (1) | | | | | +--Elapinae (1) | | | | | +--Naja naja (1) | | | +--Mammalia (594) | | | | | +--Metatheria (4) | | | | | | | +--Dasyuromorphia (1) | | | | | | | | | +--Dasyuridae (1) | | | | | | | | | +--Sarcophilus harrisii (Tasmanian devil) (1) | | | | | | | +--Didelphimorphia (1) | | | | | | | | | +--Didelphidae (1) | | | | | | | | | +--Monodelphis domestica (gray short-tailed opossum) (1) | | | | | | | +--Diprotodontia (2) | | | | | | | +--Vombatidae (1) | | | | | | | | | +--Vombatus ursinus (common wombat) (1) | | | | | | | +--Phascolarctidae (1) | | | | | | | +--Phascolarctos cinereus (koala) (1) | | | | | +--Eutheria (590) | | | | | +--Afrotheria (4) | | | | | | | +--Sirenia (1) | | | | | | | | | +--Trichechidae (1) | | | | | | | | | +--Trichechus manatus latirostris (1) | | | | | | | +--Proboscidea (1) | | | | | | | | | +--Elephantidae (1) | | | | | | | | | +--Loxodonta africana (African savanna elephant) (1) | | | | | | | +--Chrysochloridae (2) | | | | | | | +--Chrysochlorinae (2) | | | | | | | +--Chrysochloris asiatica (2) | | | | | +--Euarchontoglires (278) | | | | | | | +--Primates (95) | | | | | | | | | +--Haplorrhini (84) | | | | | | | | | | | +--Catarrhini (59) | | | | | | | | | | | | | +--Hominidae (21) | | | | | | | | | | | | | | | +--Pongo abelii (Sumatran orangutan) (3) | | | | | | | | | | | | | | | +--Gorilla gorilla gorilla (western lowland gorilla) (3) | | | | | | | | | | | | | | | +--Pan paniscus (pygmy chimpanzee) (3) | | | | | | | | | | | | | | | +--Homo sapiens (human) (9) | | | | | | | | | | | | | | | +--Pan troglodytes (chimpanzee) (3) | | | | | | | | | | | | | +--Cercopithecidae (35) | | | | | | | | | | | | | | | +--Cercopithecinae (23) | | | | | | | | | | | | | | | | | +--Macaca fascicularis (crab-eating macaque) (3) | | | | | | | | | | | | | | | | | +--Papio anubis (Olive baboon) (2) | | | | | | | | | | | | | | | | | +--Chlorocebus sabaeus (2) | | | | | | | | | | | | | | | | | +--Macaca mulatta (Rhesus monkey) (3) | | | | | | | | | | | | | | | | | +--Mandrillus leucophaeus (drill) (3) | | | | | | | | | | | | | | | | | +--Theropithecus gelada (gelada baboon) (3) | | | | | | | | | | | | | | | | | +--Cercocebus atys (sooty mangabey) (3) | | | | | | | | | | | | | | | | | +--Macaca nemestrina (pig-tailed macaque) (4) | | | | | | | | | | | | | | | +--Colobinae (12) | | | | | | | | | | | | | | | +--Colobus angolensis palliatus (3) | | | | | | | | | | | | | | | +--Rhinopithecus bieti (Black snub-nosed monkey) (3) | | | | | | | | | | | | | | | +--Piliocolobus tephrosceles (Ugandan red Colobus) (3) | | | | | | | | | | | | | | | +--Rhinopithecus roxellana (golden snub-nosed monkey) (3) | | | | | | | | | | | | | +--Hylobatidae (3) | | | | | | | | | | | | | +--Nomascus leucogenys (Northern white-cheeked gibbon) (3) | | | | | | | | | | | +--Platyrrhini (25) | | | | | | | | | | | +--Aotidae (7) | | | | | | | | | | | | | +--Aotus nancymaae (Ma's night monkey) (7) | | | | | | | | | | | +--Cebidae (18) | | | | | | | | | | | +--Saimiriinae (6) | | | | | | | | | | | | | +--Saimiri boliviensis boliviensis (Bolivian squirrel monkey) (6) | | | | | | | | | | | +--Callitrichinae (6) | | | | | | | | | | | | | +--Callithrix jacchus (white-tufted-ear marmoset) (6) | | | | | | | | | | | +--Cebinae (6) | | | | | | | | | | | +--Cebus apella (Tufted capuchin) (6) | | | | | | | | | +--Strepsirrhini (11) | | | | | | | | | +--Lemuriformes (5) | | | | | | | | | | | +--Indriidae (2) | | | | | | | | | | | | | +--Propithecus coquereli (Coquerel's sifaka) (2) | | | | | | | | | | | +--Cheirogaleidae (3) | | | | | | | | | | | +--Microcebus murinus (gray mouse lemur) (3) | | | | | | | | | +--Lorisiformes (6) | | | | | | | | | +--Galagidae (6) | | | | | | | | | +--Otolemur garnettii (small-eared galago) (6) | | | | | | | +--Scandentia (12) | | | | | | | | | +--Tupaiidae (12) | | | | | | | | | +--Tupaia chinensis (Chinese tree shrew) (12) | | | | | | | +--Glires (171) | | | | | | | +--Rodentia (164) | | | | | | | | | +--Hystricognathi (33) | | | | | | | | | | | +--Chinchillidae (3) | | | | | | | | | | | | | +--Chinchilla lanigera (3) | | | | | | | | | | | +--Caviidae (8) | | | | | | | | | | | | | +--Cavia porcellus (Domestic guinea pig) (8) | | | | | | | | | | | +--Bathyergidae (9) | | | | | | | | | | | | | +--Fukomys damarensis (Damara mole-rat) (4) | | | | | | | | | | | | | +--Heterocephalus glaber (naked mole-rat) (5) | | | | | | | | | | | +--Octodontidae (13) | | | | | | | | | | | +--Octodon degus (degu) (13) | | | | | | | | | +--Sciurognathi (131) | | | | | | | | | +--Muroidea (35) | | | | | | | | | | | +--Spalacidae (12) | | | | | | | | | | | | | +--Spalacinae (12) | | | | | | | | | | | | | +--Nannospalax galili (Upper Galilee mountains blind mole rat) (12) | | | | | | | | | | | +--Muridae (16) | | | | | | | | | | | | | +--Murinae (16) | | | | | | | | | | | | | +--Rattus norvegicus (Norway rat) (4) | | | | | | | | | | | | | +--Mus (12) | | | | | | | | | | | | | +--Mus spicilegus (steppe mouse) (6) | | | | | | | | | | | | | +--Mus musculus (house mouse) (6) | | | | | | | | | | | +--Cricetidae (7) | | | | | | | | | | | +--Arvicolinae (2) | | | | | | | | | | | | | +--Microtus ochrogaster (prairie vole) (2) | | | | | | | | | | | +--Cricetinae (2) | | | | | | | | | | | | | +--Cricetulus griseus (Chinese hamster) (1) | | | | | | | | | | | | | +--Mesocricetus auratus (golden hamster) (1) | | | | | | | | | | | +--Neotominae (3) | | | | | | | | | | | +--Neotoma lepida (desert woodrat) (1) | | | | | | | | | | | +--Peromyscus maniculatus bairdii (prairie deer mouse) (2) | | | | | | | | | +--Sciuridae (70) | | | | | | | | | | | +--Xerinae (50) | | | | | | | | | | | | | +--Marmotini (50) | | | | | | | | | | | | | +--Marmota marmota marmota (Alpine marmot) (10) | | | | | | | | | | | | | +--Spermophilus tridecemlineatus (thirteen-lined ground squirrel) (10) | | | | | | | | | | | | | +--Spermophilus parryii (Arctic ground squirrel) (9) | | | | | | | | | | | | | +--Spermophilus dauricus (Daurian ground squirrel) (11) | | | | | | | | | | | | | +--Marmota monax (woodchuck) (10) | | | | | | | | | | | +--Sciurinae (20) | | | | | | | | | | | +--Sciurini (20) | | | | | | | | | | | +--Sciurus carolinensis (gray squirrel) (10) | | | | | | | | | | | +--Sciurus vulgaris (Eurasian red squirrel) (10) | | | | | | | | | +--Heteromyidae (6) | | | | | | | | | | | +--Dipodomyinae (6) | | | | | | | | | | | +--Dipodomys ordii (Ord's kangaroo rat) (6) | | | | | | | | | +--Dipodidae (6) | | | | | | | | | | | +--Dipodinae (6) | | | | | | | | | | | +--Jaculus jaculus (lesser Egyptian jerboa) (6) | | | | | | | | | +--Castoridae (14) | | | | | | | | | +--Castor canadensis (American beaver) (14) | | | | | | | +--Lagomorpha (7) | | | | | | | +--Leporidae (7) | | | | | | | +--Oryctolagus cuniculus (rabbit) (7) | | | | | +--Laurasiatheria (308) | | | | | +--Carnivora (79) | | | | | | | +--Feliformia (40) | | | | | | | | | +--Hyaenidae (9) | | | | | | | | | | | +--Crocuta crocuta (spotted hyena) (9) | | | | | | | | | +--Herpestidae (7) | | | | | | | | | | | +--Suricata suricatta (meerkat) (7) | | | | | | | | | +--Felidae (24) | | | | | | | | | +--Pantherinae (6) | | | | | | | | | | | +--Panthera leo (lion) (3) | | | | | | | | | | | +--Panthera tigris altaica (Amur tiger) (3) | | | | | | | | | +--Felinae (14) | | | | | | | | | | | +--Puma concolor (puma) (5) | | | | | | | | | | | +--Felis catus (domestic cat) (3) | | | | | | | | | | | +--Lynx pardinus (Spanish lynx) (3) | | | | | | | | | | | +--Lynx canadensis (Canada lynx) (3) | | | | | | | | | +--Acinonychinae (4) | | | | | | | | | +--Acinonyx jubatus (cheetah) (4) | | | | | | | +--Caniformia (39) | | | | | | | +--Phocidae (4) | | | | | | | | | +--Monachus schauinslandi (Hawaiian monk seal) (2) | | | | | | | | | +--Leptonychotes weddellii (Weddell seal) (2) | | | | | | | +--Otariidae (3) | | | | | | | | | +--Callorhinus ursinus (northern fur seal) (3) | | | | | | | +--Mustelidae (12) | | | | | | | | | +--Martinae (3) | | | | | | | | | | | +--Gulo gulo (wolverine) (3) | | | | | | | | | +--Lutrinae (3) | | | | | | | | | | | +--Enhydra lutris kenyoni (3) | | | | | | | | | +--Mustelinae (6) | | | | | | | | | +--Neovison vison (3) | | | | | | | | | +--Mustela putorius furo (domestic ferret) (3) | | | | | | | +--Ursidae (9) | | | | | | | | | +--Ursus americanus (American black bear) (3) | | | | | | | | | +--Ailuropoda melanoleuca (giant panda) (3) | | | | | | | | | +--Ursus maritimus (polar bear) (3) | | | | | | | +--Canidae (8) | | | | | | | | | +--Canis lupus dingo (dingo) (2) | | | | | | | | | +--Vulpes vulpes (red fox) (2) | | | | | | | | | +--Nyctereutes procyonoides (raccoon dog) (2) | | | | | | | | | +--Canis lupus familiaris (dog) (2) | | | | | | | +--Odobenidae (3) | | | | | | | +--Odobenus rosmarus divergens (Pacific walrus) (3) | | | | | +--Cetartiodactyla (60) | | | | | | | +--Tylopoda (4) | | | | | | | | | +--Camelidae (4) | | | | | | | | | +--Vicugna pacos (alpaca) (1) | | | | | | | | | +--Camelus dromedarius (Arabian camel) (1) | | | | | | | | | +--Camelus ferus (Wild Bactrian camel) (1) | | | | | | | | | +--Camelus bactrianus (Bactrian camel) (1) | | | | | | | +--Cetacea (11) | | | | | | | | | +--Odontoceti (7) | | | | | | | | | | | +--Monodontidae (2) | | | | | | | | | | | | | +--Monodon monoceros (narwhal) (1) | | | | | | | | | | | | | +--Delphinapterus leucas (beluga whale) (1) | | | | | | | | | | | +--Phocoenidae (1) | | | | | | | | | | | | | +--Phocoena sinus (vaquita) (1) | | | | | | | | | | | +--Physeteridae (1) | | | | | | | | | | | | | +--Physeter catodon (sperm whale) (1) | | | | | | | | | | | +--Lipotidae (1) | | | | | | | | | | | | | +--Lipotes vexillifer (Yangtze River dolphin) (1) | | | | | | | | | | | +--Delphinidae (2) | | | | | | | | | | | +--Sousa chinensis (Indo-pacific humpbacked dolphin) (1) | | | | | | | | | | | +--Tursiops truncatus (bottlenosed dolphin) (1) | | | | | | | | | +--Mysticeti (4) | | | | | | | | | +--Balaenopteridae (3) | | | | | | | | | | | +--Balaenoptera musculus (Blue whale) (2) | | | | | | | | | | | +--Balaenoptera physalus (Fin whale) (1) | | | | | | | | | +--Eschrichtiidae (1) | | | | | | | | | +--Eschrichtius robustus (grey whale) (1) | | | | | | | +--Ruminantia (43) | | | | | | | | | +--Pecora (43) | | | | | | | | | +--Bovidae (27) | | | | | | | | | | | +--Caprinae (8) | | | | | | | | | | | | | +--Capra hircus (goat) (4) | | | | | | | | | | | | | +--Ovis aries (sheep) (4) | | | | | | | | | | | +--Bovinae (19) | | | | | | | | | | | +--Bos grunniens (domestic yak) (3) | | | | | | | | | | | +--Bos indicus (4) | | | | | | | | | | | +--Bos (4) | | | | | | | | | | | | | +--Bos indicus x Bos taurus (hybrid cattle) (4) | | | | | | | | | | | +--Bos taurus (cattle) (4) | | | | | | | | | | | +--Bos grunniens mutus (4) | | | | | | | | | +--Moschidae (3) | | | | | | | | | | | +--Moschus moschiferus (Siberian musk deer) (3) | | | | | | | | | +--Cervidae (13) | | | | | | | | | +--Odocoileinae (3) | | | | | | | | | | | +--Odocoileus virginianus texanus (3) | | | | | | | | | +--Muntiacinae (4) | | | | | | | | | | | +--Muntiacus reevesi (Chinese muntjac) (4) | | | | | | | | | +--Cervinae (6) | | | | | | | | | +--Cervus elaphus yarkandensis (3) | | | | | | | | | +--Cervus elaphus hippelaphus (3) | | | | | | | +--Suina (2) | | | | | | | +--Tayassuidae (1) | | | | | | | | | +--Catagonus wagneri (Chacoan peccary) (1) | | | | | | | +--Suidae (1) | | | | | | | +--Sus scrofa (pig) (1) | | | | | +--Insectivora (8) | | | | | | | +--Talpidae (1) | | | | | | | | | +--Galemys pyrenaicus (1) | | | | | | | +--Erinaceidae (7) | | | | | | | +--Erinaceinae (7) | | | | | | | +--Erinaceus europaeus (western European hedgehog) (7) | | | | | +--Perissodactyla (3) | | | | | | | +--Equidae (2) | | | | | | | | | +--Equus caballus (horse) (1) | | | | | | | | | +--Equus asinus (ass) (1) | | | | | | | +--Rhinocerotidae (1) | | | | | | | +--Diceros bicornis minor (1) | | | | | +--Chiroptera (158) | | | | | +--Microchiroptera (147) | | | | | | | +--Rhinolophidae (8) | | | | | | | | | +--Hipposiderinae (4) | | | | | | | | | | | +--Hipposideros armiger (4) | | | | | | | | | +--Rhinolophinae (4) | | | | | | | | | +--Rhinolophus ferrumequinum (greater horseshoe bat) (4) | | | | | | | +--Phyllostomidae (17) | | | | | | | | | +--Phyllostominae (17) | | | | | | | | | +--Phyllostomus discolor (pale spear-nosed bat) (17) | | | | | | | +--Molossidae (13) | | | | | | | | | +--Molossus molossus (Pallas's mastiff bat) (13) | | | | | | | +--Vespertilionidae (109) | | | | | | | +--Myotis lucifugus (little brown bat) (14) | | | | | | | +--Eptesicus nilssoni (northern bat) (27) | | | | | | | +--Myotis davidii (15) | | | | | | | +--Pipistrellus kuhlii (Kuhl's pipistrelle) (20) | | | | | | | +--Myotis myotis (16) | | | | | | | +--Myotis brandtii (17) | | | | | +--Megachiroptera (11) | | | | | +--Pteropodidae (11) | | | | | +--Pteropodinae (11) | | | | | +--Rousettus aegyptiacus (Egyptian rousette) (4) | | | | | +--Pteropus vampyrus (large flying fox) (3) | | | | | +--Pteropus alecto (black flying fox) (4) | | | +--Testudines (5) | | | +--Cryptodira (3) | | | | | +--Testudinoidea (3) | | | | | +--Chelydridae (2) | | | | | | | +--Chelydra serpentina (snapping turtle) (1) | | | | | | | +--Platysternon megacephalum (big-headed turtle) (1) | | | | | +--Testudinidae (1) | | | | | +--Gopherus agassizii (desert tortoise) (1) | | | +--Pleurodira (2) | | | +--Pelomedusidae (2) | | | +--Pelusios castaneus (2) | +--Opisthokonta (25) | +--Metazoa (25) | +--Eumetazoa (25) | +--Bilateria (25) | +--Deuterostomia (25) | +--Chordata (25) | +--Craniata (25) | +--Vertebrata (25) | +--Gnathostomata (25) | +--Teleostomi (25) | +--Euteleostomi (25) | +--Sarcopterygii (25) | +--Dipnotetrapodomorpha (25) | +--Tetrapoda (25) | +--Amniota (25) | +--Sauropsida (2) | | | +--Sauria (2) | | | +--Archelosauria (2) | | | +--Testudinata (2) | | | +--Testudines (2) | | | +--Cryptodira (2) | | | +--Durocryptodira (2) | | | +--Testudinoidea (2) | | | +--Emydidae (1) | | | | | +--Terrapene (1) | | | | | +--Terrapene carolina triunguis (three-toed box turtle) (1) | | | +--Testudinidae (1) | | | +--Gopherus evgoodei (goodes thornscrub tortoise) (1) | +--Mammalia (23) | +--Theria (23) | +--Eutheria (23) | +--Afrotheria (1) | | | +--Tubulidentata (1) | | | +--Orycteropodidae (1) | | | +--Orycteropus (1) | | | +--Orycteropus afer afer (1) | +--Boreoeutheria (22) | +--Euarchontoglires (17) | | | +--Primates (17) | | | +--Haplorrhini (15) | | | | | +--Simiiformes (6) | | | | | | | +--Platyrrhini (6) | | | | | | | +--Cebidae (6) | | | | | | | +--Cebinae (6) | | | | | | | +--Cebus imitator (Panamanian white-faced capuchin) (6) | | | | | +--Tarsiiformes (9) | | | | | +--Tarsiidae (9) | | | | | +--Carlito syrichta (Philippine tarsier) (9) | | | +--Strepsirrhini (2) | | | +--Lemuriformes (2) | | | +--Lemuridae (2) | | | +--Prolemur simus (greater bamboo lemur) (2) | +--Laurasiatheria (5) | +--Artiodactyla (5) | +--Whippomorpha (1) | | | +--Cetacea (1) | | | +--Odontoceti (1) | | | +--Phocoenidae (1) | | | +--Neophocaena (1) | | | +--Neophocaena asiaeorientalis asiaeorientalis (yangtze finless porpoise) (1) | +--Ruminantia (4) | +--Pecora (4) | +--Bovidae (4) | +--Bovinae (4) | +--Bison (4) | +--Bison bison bison (north american plains bison) (4)