# Species tree for RF00013 # Generated from Rfam version 14.10 | +--filamentous thermophilic bacterium 110S (1) | +--Eukaryota (26) | | | +--Metazoa (13) | | | | | +--Nematoda (4) | | | | | | | +--Chromadorea (2) | | | | | | | | | +--Rhabditida (2) | | | | | | | | | +--Rhabditoidea (1) | | | | | | | | | | | +--Rhabditidae (1) | | | | | | | | | | | +--Peloderinae (1) | | | | | | | | | | | +--Caenorhabditis remanei (1) | | | | | | | | | +--Panagrolaimoidea (1) | | | | | | | | | +--Strongyloididae (1) | | | | | | | | | +--Parastrongyloides trichosuri (1) | | | | | | | +--Enoplea (2) | | | | | | | +--Trichocephalida (2) | | | | | | | +--Trichuridae (2) | | | | | | | +--Trichuris trichiura (2) | | | | | +--Arthropoda (9) | | | | | +--Hexapoda (8) | | | | | | | +--Insecta (8) | | | | | | | +--Pterygota (8) | | | | | | | +--Neoptera (8) | | | | | | | +--Endopterygota (8) | | | | | | | +--Hymenoptera (2) | | | | | | | | | +--Apocrita (2) | | | | | | | | | +--Aculeata (2) | | | | | | | | | +--Vespoidea (2) | | | | | | | | | +--Formicidae (2) | | | | | | | | | +--Formicinae (2) | | | | | | | | | +--Lasius (2) | | | | | | | | | +--Lasius niger (2) | | | | | | | +--Coleoptera (3) | | | | | | | | | +--Polyphaga (3) | | | | | | | | | +--Cucujiformia (3) | | | | | | | | | +--Curculionidae (3) | | | | | | | | | +--Scolytinae (3) | | | | | | | | | +--Dendroctonus ponderosae (mountain pine beetle) (3) | | | | | | | +--Diptera (3) | | | | | | | +--Nematocera (1) | | | | | | | | | +--Culicoidea (1) | | | | | | | | | +--Culicidae (1) | | | | | | | | | +--Anophelinae (1) | | | | | | | | | +--Anopheles (1) | | | | | | | | | +--Anopheles maculatus (1) | | | | | | | +--Brachycera (2) | | | | | | | +--Muscomorpha (2) | | | | | | | +--Hippoboscoidea (2) | | | | | | | +--Glossinidae (2) | | | | | | | +--Glossina austeni (1) | | | | | | | +--Glossina morsitans morsitans (1) | | | | | +--Chelicerata (1) | | | | | +--Arachnida (1) | | | | | +--Acari (1) | | | | | +--Parasitiformes (1) | | | | | +--Ixodida (1) | | | | | +--Ixodoidea (1) | | | | | +--Ixodidae (1) | | | | | +--Ixodinae (1) | | | | | +--Ixodes scapularis (black-legged tick) (1) | | | +--Viridiplantae (11) | | | | | +--Streptophyta (11) | | | | | +--Embryophyta (11) | | | | | +--Tracheophyta (10) | | | | | | | +--Spermatophyta (10) | | | | | | | +--Magnoliophyta (10) | | | | | | | +--Liliopsida (3) | | | | | | | | | +--Poales (3) | | | | | | | | | +--Poaceae (3) | | | | | | | | | +--BEPclade (3) | | | | | | | | | +--Pooideae (3) | | | | | | | | | +--Triticeae (3) | | | | | | | | | +--Triticum urartu (3) | | | | | | | +--eudicotyledons (7) | | | | | | | +--coreeudicotyledons (7) | | | | | | | +--Caryophyllales (2) | | | | | | | | | +--Amaranthaceae (2) | | | | | | | | | +--Spinacia oleracea (spinach) (2) | | | | | | | +--rosids (5) | | | | | | | +--fabids (3) | | | | | | | | | +--Malpighiales (2) | | | | | | | | | | | +--Euphorbiaceae (2) | | | | | | | | | | | +--Acalyphoideae (2) | | | | | | | | | | | +--Acalypheae (2) | | | | | | | | | | | +--Ricinus communis (castor bean) (2) | | | | | | | | | +--Fabales (1) | | | | | | | | | +--Fabaceae (1) | | | | | | | | | +--Papilionoideae (1) | | | | | | | | | +--Phaseoleae (1) | | | | | | | | | +--Vigna angularis (adzuki bean) (1) | | | | | | | +--malvids (2) | | | | | | | +--Malvales (2) | | | | | | | +--Malvaceae (2) | | | | | | | +--Grewioideae (2) | | | | | | | +--Corchorus olitorius (2) | | | | | +--Bryophyta (1) | | | | | +--Bryophytina (1) | | | | | +--Bryopsida (1) | | | | | +--Funariidae (1) | | | | | +--Funariales (1) | | | | | +--Funariaceae (1) | | | | | +--Physcomitrella patens (1) | | | +--Opisthokonta (2) | | | +--Fungi (2) | | | +--Dikarya (2) | | | +--Ascomycota (2) | | | +--saccharomyceta (2) | | | +--Pezizomycotina (2) | | | +--leotiomyceta (2) | | | +--sordariomyceta (2) | | | +--Sordariomycetes (2) | | | +--Hypocreomycetidae (2) | | | +--Glomerellales (2) | | | +--Glomerellaceae (2) | | | +--Colletotrichum (2) | | | +--Colletotrichum gloeosporioides Cg-14 (2) | +--Bacteria (3679) | | | +--candidatedivisionNC10 (1) | | | | | +--NC10 bacterium 'Dutch sediment' (1) | | | +--Dictyoglomi (1) | | | | | +--Dictyoglomales (1) | | | | | +--Dictyoglomaceae (1) | | | | | +--Dictyoglomus turgidum DSM 6724 (1) | | | +--Chrysiogenetes (1) | | | | | +--Chrysiogenales (1) | | | | | +--Chrysiogenaceae (1) | | | | | +--Desulfurispirillum indicum S5 (1) | | | +--low GC Gram-positive bacterium strain AHT28 (1) | | | +--Cyanobacteria (71) | | | | | +--Prochlorales (6) | | | | | | | +--Prochlorotrichaceae (1) | | | | | | | | | +--Prochlorothrix hollandica PCC 9006 (1) | | | | | | | +--Prochlorococcaceae (5) | | | | | | | +--Prochlorococcus marinus str. MIT 9313 (1) | | | | | | | +--Prochlorococcus marinus str. MIT 9211 (1) | | | | | | | +--Prochlorococcus marinus subsp. marinus str. CCMP1375 (1) | | | | | | | +--Prochlorococcus marinus subsp. pastoris str. CCMP1986 (1) | | | | | | | +--Prochlorococcus marinus str. NATL2A (1) | | | | | +--Stigonematales (2) | | | | | | | +--Mastigocoleus testarum BC008 (1) | | | | | | | +--Fischerella sp. JSC-11 (1) | | | | | +--Pleurocapsales (4) | | | | | | | +--Stanieria cyanosphaera PCC 7437 (1) | | | | | | | +--Chroococcidiopsis thermalis PCC 7203 (1) | | | | | | | +--Xenococcus sp. PCC 7305 (1) | | | | | | | +--Pleurocapsa sp. PCC 7327 (1) | | | | | +--Nostocales (14) | | | | | | | +--Nostocaceae (10) | | | | | | | | | +--Raphidiopsis brookii D9 (1) | | | | | | | | | +--Nostoc punctiforme PCC 73102 (1) | | | | | | | | | +--Nostoc sp. PCC 7524 (1) | | | | | | | | | +--Anabaena cylindrica PCC 7122 (1) | | | | | | | | | +--Nodularia spumigena CCY9414 (1) | | | | | | | | | +--'Nostoc azollae' 0708 (1) | | | | | | | | | +--Anabaena sp. 90 (1) | | | | | | | | | +--Aphanizomenon ovalisporum (1) | | | | | | | | | +--Cylindrospermum stagnale PCC 7417 (1) | | | | | | | | | +--Nostoc sp. PCC 7120 (1) | | | | | | | +--Microchaetaceae (1) | | | | | | | | | +--Tolypothrix sp. PCC 7601 = UTEX LB 481 (1) | | | | | | | +--Scytonemataceae (1) | | | | | | | | | +--Scytonema hofmanni PCC 7110 (1) | | | | | | | +--Rivulariaceae (2) | | | | | | | +--Calothrix sp. PCC 7507 (1) | | | | | | | +--Rivularia sp. PCC 7116 (1) | | | | | +--Oscillatoriales cyanobacterium JSC-12 (1) | | | | | +--Oscillatoriales (15) | | | | | | | +--Lyngbya majuscula 3L (1) | | | | | | | +--Oscillatoria rosea IAM M-220 (1) | | | | | | | +--Phormidium ambiguum IAM M-71 (1) | | | | | | | +--Oscillatoria acuminata PCC 6304 (1) | | | | | | | +--Pseudanabaena sp. PCC 7367 (1) | | | | | | | +--Leptolyngbya sp. O-77 (1) | | | | | | | +--Oscillatoria sp. PCC 7112 (1) | | | | | | | +--Oscillatoria sp. PCC 8927 (1) | | | | | | | +--Planktothrix sp. PCC 9214 (1) | | | | | | | +--Oscillatoria sp. PCC 6506 (1) | | | | | | | +--Lyngbya sp. PCC 8106 (1) | | | | | | | +--Microcoleus chthonoplastes PCC 7420 (1) | | | | | | | +--Trichodesmium erythraeum IMS101 (1) | | | | | | | +--Leptolyngbya sp. PCC 7376 (1) | | | | | | | +--Planktothrix agardhii NIVA-CYA 126/8 (1) | | | | | +--Gloeobacteria (1) | | | | | | | +--Gloeobacterales (1) | | | | | | | +--Gloeobacter violaceus PCC 7421 (1) | | | | | +--Chroococcales (28) | | | | | +--Synechococcus sp. RS9917 (1) | | | | | +--Halothececluster (1) | | | | | | | +--Halothece sp. PCC 7418 (1) | | | | | +--Cyanothece sp. PCC 7822 (1) | | | | | +--Thermosynechococcus elongatus BP-1 (1) | | | | | +--Synechococcus sp. PCC 6312 (1) | | | | | +--Cyanothece sp. ATCC 51142 (1) | | | | | +--Cyanothece sp. PCC 8801 (1) | | | | | +--Synechococcus sp. RS9916 (1) | | | | | +--Rubidibacter lacunae KORDI 51-2 (1) | | | | | +--Cyanothece sp. PCC 7424 (1) | | | | | +--Microcystis aeruginosa NIES-843 (1) | | | | | +--Synechocystis sp. PCC 6803 (1) | | | | | +--Synechococcus sp. WH 7803 (1) | | | | | +--Synechococcus sp. RCC307 (1) | | | | | +--Synechococcus sp. PCC 7002 (1) | | | | | +--Candidatus Synechococcus spongiarum (1) | | | | | +--Synechococcus sp. PCC 7335 (1) | | | | | +--Cyanobacterium stanieri PCC 7202 (1) | | | | | +--Crocosphaera watsonii WH 8501 (1) | | | | | +--Gloeocapsa sp. PCC 73106 (1) | | | | | +--Cyanothece sp. PCC 7425 (1) | | | | | +--Synechococcus sp. WH 5701 (1) | | | | | +--Synechococcus sp. WH 8102 (1) | | | | | +--Synechococcus elongatus PCC 7942 (1) | | | | | +--Acaryochloris marina MBIC11017 (1) | | | | | +--Synechococcus sp. JA-2-3B'a(2-13) (1) | | | | | +--Cyanobium sp. PCC 7001 (1) | | | | | +--Synechococcus sp. CC9311 (1) | | | +--Acidobacteria (39) | | | | | +--unclassifiedAcidobacteria (29) | | | | | | | +--Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15 (1) | | | | | | | +--Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21 (1) | | | | | | | +--Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28 (1) | | | | | | | +--Acidobacteria bacterium Mor1 (1) | | | | | | | +--Acidobacteria bacterium 13_1_40CM_3_56_11 (1) | | | | | | | +--Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13 (1) | | | | | | | +--Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10 (1) | | | | | | | +--Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18 (1) | | | | | | | +--Acidobacteria bacterium RIFCSPHIGHO2_02_FULL_67_57 (1) | | | | | | | +--Acidobacteriasubdivision6 (1) | | | | | | | | | +--Luteitalea pratensis (1) | | | | | | | +--Acidobacteria bacterium 13_1_40CM_4_65_8 (1) | | | | | | | +--Acidobacteria bacterium SCN 69-37 (1) | | | | | | | +--Acidobacteria bacterium 13_1_40CM_4_58_4 (1) | | | | | | | +--Acidobacteria bacterium 13_1_40CM_2_64_6 (1) | | | | | | | +--Acidobacteria bacterium 13_1_20CM_3_53_8 (1) | | | | | | | +--Acidobacteria bacterium 13_1_40CM_56_16 (1) | | | | | | | +--Acidobacteria bacterium 13_1_20CM_2_60_10 (1) | | | | | | | +--Acidobacteria bacterium 13_1_40CM_2_60_7 (1) | | | | | | | +--Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21 (1) | | | | | | | +--Acidobacteria bacterium RIFCSPLOWO2_12_FULL_59_11 (1) | | | | | | | +--Acidobacteria bacterium 13_1_40CM_4_61_5 (1) | | | | | | | +--Acidobacteria bacterium RBG_16_70_10 (1) | | | | | | | +--Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20 (1) | | | | | | | +--Acidobacteria bacterium OLB17 (1) | | | | | | | +--Acidobacteria bacterium 13_1_20CM_2_68_14 (1) | | | | | | | +--Acidobacteria bacterium 13_1_40CM_2_56_5 (1) | | | | | | | +--Acidobacteria bacterium 13_1_40CM_4_69_4 (1) | | | | | | | +--Acidobacteria bacterium 13_1_40CM_65_14 (1) | | | | | | | +--Acidobacteria bacterium 13_1_40CM_3_65_5 (1) | | | | | +--Acidobacteriia (3) | | | | | | | +--Acidobacteriales (3) | | | | | | | +--Acidobacteriales bacterium 59-55 (1) | | | | | | | +--Acidobacteriaceae (1) | | | | | | | | | +--Granulicella (1) | | | | | | | | | +--Granulicella tundricola MP5ACTX9 (1) | | | | | | | +--Acidobacteriales bacterium 13_1_40CM_3_55_5 (1) | | | | | +--Solibacteres (1) | | | | | | | +--Solibacterales (1) | | | | | | | +--Solibacteraceae (1) | | | | | | | +--Candidatus Solibacter usitatus Ellin6076 (1) | | | | | +--Acidobacteriales (4) | | | | | | | +--Acidobacteriaceae (4) | | | | | | | +--Acidobacterium sp. MP5ACTX8 (1) | | | | | | | +--Granulicella rosea (1) | | | | | | | +--Terriglobus roseus (1) | | | | | | | +--Acidobacterium capsulatum ATCC 51196 (1) | | | | | +--Candidatus Chloracidobacterium thermophilum B (1) | | | | | +--Candidatus Koribacter versatilis Ellin345 (1) | | | +--Fusobacteria (6) | | | | | +--Fusobacteriales (4) | | | | | | | +--Fusobacteriaceae (4) | | | | | | | +--Leptotrichia goodfellowii F0264 (1) | | | | | | | +--Leptotrichia buccalis C-1013-b (1) | | | | | | | +--Leptotrichia hofstadii F0254 (1) | | | | | | | +--Sebaldella termitidis ATCC 33386 (1) | | | | | +--Fusobacteriia (2) | | | | | +--Fusobacteriales (2) | | | | | +--Leptotrichiaceae (2) | | | | | +--Leptotrichia sp. oral taxon 847 (1) | | | | | +--Leptotrichia (1) | | | | | +--Leptotrichia sp. oral taxon 215 str. W9775 (1) | | | +--Elusimicrobia (3) | | | | | +--Elusimicrobia bacterium RIFOXYC2_FULL_34_12 (1) | | | | | +--Elusimicrobia bacterium RIFOXYD2_FULL_34_15 (1) | | | | | +--Elusimicrobia bacterium RIFOXYA12_FULL_49_49 (1) | | | +--PVCgroup (74) | | | | | +--Kiritimatiellaeota (1) | | | | | | | +--Kiritimatiellae (1) | | | | | | | +--Kiritimatiellales (1) | | | | | | | +--Kiritimatiellaceae (1) | | | | | | | +--Kiritimatiella glycovorans (1) | | | | | +--Planctomycetes (26) | | | | | | | +--Planctomycetes bacterium RBG_16_41_13 (1) | | | | | | | +--Planctomycetes bacterium RBG_16_59_8 (1) | | | | | | | +--Planctomycetes bacterium RBG_13_62_9 (2) | | | | | | | +--Planctomycetia (6) | | | | | | | | | +--CandidatusBrocadiales (1) | | | | | | | | | | | +--CandidatusBrocadiaceae (1) | | | | | | | | | | | +--Candidatus Scalindua rubra (1) | | | | | | | | | +--Planctomycetales (5) | | | | | | | | | +--Gemmataceae (2) | | | | | | | | | | | +--Fimbriiglobus ruber (1) | | | | | | | | | | | +--Gemmata sp. SH-PL17 (1) | | | | | | | | | +--Isosphaeraceae (1) | | | | | | | | | | | +--Singulisphaera (1) | | | | | | | | | | | +--Singulisphaera acidiphila DSM 18658 (1) | | | | | | | | | +--Planctomycetaceae (2) | | | | | | | | | +--Planctomyces sp. SH-PL14 (1) | | | | | | | | | +--Planctomycetaceae bacterium SCGC AG-212-F19 (1) | | | | | | | +--Planctomycetes bacterium GWF2_42_9 (1) | | | | | | | +--Planctomycetes bacterium RIFCSPLOWO2_02_FULL_50_16 (1) | | | | | | | +--Planctomycetes bacterium RIFCSPLOWO2_12_FULL_40_19 (1) | | | | | | | +--Planctomycetes bacterium RBG_19FT_COMBO_48_8 (1) | | | | | | | +--Planctomycetes bacterium RBG_13_44_8b (2) | | | | | | | +--Phycisphaerae (5) | | | | | | | | | +--Phycisphaerae bacterium SM23_30 (1) | | | | | | | | | +--Phycisphaerae bacterium L21-RPul-D3 (1) | | | | | | | | | +--Phycisphaerae bacterium SM-Chi-D1 (1) | | | | | | | | | +--Phycisphaerae bacterium SM1_79 (1) | | | | | | | | | +--Phycisphaerae bacterium ST-NAGAB-D1 (1) | | | | | | | +--Planctomycetes bacterium RBG_13_50_24 (1) | | | | | | | +--Planctomycetes bacterium RBG_16_55_9 (1) | | | | | | | +--Planctomycetes bacterium GWC2_45_44 (1) | | | | | | | +--Planctomycetes bacterium RIFCSPHIGHO2_12_FULL_52_36 (1) | | | | | | | +--Planctomycetes bacterium GWF2_41_51 (1) | | | | | +--Verrucomicrobia (18) | | | | | | | +--unclassifiedVerrucomicrobia (8) | | | | | | | | | +--Verrucomicrobia bacterium CAG:312_58_20 (1) | | | | | | | | | +--Verrucomicrobia bacterium GWC2_42_7 (1) | | | | | | | | | +--Verrucomicrobia bacterium GWF2_51_19 (1) | | | | | | | | | +--Verrucomicrobia bacterium A1 (1) | | | | | | | | | +--Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8 (1) | | | | | | | | | +--Verrucomicrobia bacterium CG1_02_43_26 (1) | | | | | | | | | +--Verrucomicrobia bacterium IMCC26134 (1) | | | | | | | | | +--Verrucomicrobia bacterium 13_1_20CM_4_55_9 (1) | | | | | | | +--Opitutae (6) | | | | | | | | | +--Opitutales (6) | | | | | | | | | +--Opitutaceae (6) | | | | | | | | | +--Opitutaceae bacterium TSB47 (1) | | | | | | | | | +--Lacunisphaera limnophila (1) | | | | | | | | | +--Cephaloticoccus capnophilus (1) | | | | | | | | | +--Opitutaceae bacterium BACL24 MAG-120322-bin51 (1) | | | | | | | | | +--Opitutus sp. GAS368 (1) | | | | | | | | | +--Opitutaceae bacterium TAV5 (1) | | | | | | | +--Verrucomicrobiae (4) | | | | | | | +--Verrucomicrobiales (4) | | | | | | | +--Verrucomicrobiaceae (2) | | | | | | | | | +--Verrucomicrobiaceae bacterium TMED76 (1) | | | | | | | | | +--Verrucomicrobium sp. GAS474 (1) | | | | | | | +--Rubritaleaceae (1) | | | | | | | | | +--Rubritalea (1) | | | | | | | | | +--Rubritalea squalenifaciens DSM 18772 (1) | | | | | | | +--Akkermansiaceae (1) | | | | | | | +--Akkermansia glycaniphila (1) | | | | | +--Lentisphaerae (3) | | | | | | | +--unclassifiedLentisphaerae (3) | | | | | | | +--Lentisphaerae bacterium GWF2_57_35 (1) | | | | | | | +--Lentisphaerae bacterium RIFOXYC12_FULL_60_16 (1) | | | | | | | +--Lentisphaerae bacterium RIFOXYA12_FULL_48_11 (1) | | | | | +--CandidatusOmnitrophica (26) | | | | | +--Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_46_37 (1) | | | | | +--Omnitrophica WOR_2 bacterium RIFCSPLOWO2_01_FULL_41_12 (1) | | | | | +--Omnitrophica WOR_2 bacterium RIFOXYA2_FULL_38_17 (1) | | | | | +--Omnitrophica WOR_2 bacterium SM23_72 (2) | | | | | +--Candidatus Omnitrophus magneticus (1) | | | | | +--Omnitrophica WOR_2 bacterium RIFCSPLOWO2_12_FULL_63_16 (1) | | | | | +--Omnitrophica WOR_2 bacterium GWF2_43_52 (1) | | | | | +--Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_48_11 (1) | | | | | +--Candidatus Omnitrophica bacterium CG1_02_49_10 (1) | | | | | +--Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_45_21 (1) | | | | | +--Omnitrophica bacterium RIFCSPLOWO2_12_FULL_44_17 (1) | | | | | +--Omnitrophica WOR_2 bacterium GWA2_47_8 (1) | | | | | +--Candidatus Omnitrophica bacterium 4484_70.2 (1) | | | | | +--Candidatus Omnitrophica bacterium 4484_49 (1) | | | | | +--Omnitrophica WOR_2 bacterium RIFOXYB2_FULL_45_11 (1) | | | | | +--Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_52_10 (1) | | | | | +--Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_68_15 (1) | | | | | +--Candidatus Omnitrophica bacterium CG1_02_44_16 (1) | | | | | +--Candidatus Omnitrophica bacterium CG1_02_46_14 (1) | | | | | +--Omnitrophica bacterium RBG_13_46_9 (1) | | | | | +--Omnitrophica WOR_2 bacterium SM23_29 (2) | | | | | +--Candidatus Omnitrophica bacterium 4484_70.1 (1) | | | | | +--Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_50_17 (1) | | | | | +--Omnitrophica bacterium RIFCSPLOWO2_01_FULL_45_10 (1) | | | +--Nitrospirae (44) | | | | | +--Nitrospirae bacterium RBG_16_43_11 (1) | | | | | +--Nitrospirae bacterium HCH-1 (1) | | | | | +--Nitrospirae bacterium GWF2_44_13 (1) | | | | | +--Nitrospirae bacterium RBG_13_41_22 (3) | | | | | +--Nitrospirae bacterium GWD2_57_9 (1) | | | | | +--Nitrospirae bacterium RIFCSPLOWO2_02_42_7 (1) | | | | | +--Nitrospirae bacterium RIFCSPLOW2_12_42_9 (1) | | | | | +--Nitrospirae bacterium CG2_30_53_67 (1) | | | | | +--Nitrospirae bacterium GWC2_42_7 (1) | | | | | +--Nitrospirae bacterium RBG_13_39_12 (2) | | | | | +--Nitrospirae bacterium RBG_16_43_8 (1) | | | | | +--Nitrospirae bacterium RBG_16_64_22 (1) | | | | | +--Nitrospira (10) | | | | | | | +--Nitrospirales (6) | | | | | | | | | +--Nitrospiraceae (6) | | | | | | | | | +--Thermodesulfovibrio sp. RBG_19FT_COMBO_42_12 (1) | | | | | | | | | +--Nitrospira sp. OLB3 (1) | | | | | | | | | +--Leptospirillum (2) | | | | | | | | | | | +--Leptospirillumsp.GroupI (1) | | | | | | | | | | | | | +--Leptospirillum ferrooxidans C2-3 (1) | | | | | | | | | | | +--Leptospirillumsp.GroupIII (1) | | | | | | | | | | | +--Leptospirillum ferriphilum ML-04 (1) | | | | | | | | | +--Thermodesulfovibrio sp. N1 (1) | | | | | | | | | +--Nitrospira japonica (1) | | | | | | | +--Nitrospira bacterium SG8_35_4 (1) | | | | | | | +--Nitrospira bacterium SM23_35 (1) | | | | | | | +--Nitrospira bacterium SG8_3 (1) | | | | | | | +--Nitrospira bacterium SG8_35_1 (1) | | | | | +--Nitrospirae bacterium GWB2_47_37 (1) | | | | | +--Nitrospirales (5) | | | | | | | +--Nitrospiraceae (5) | | | | | | | +--Leptospirillum ferrodiazotrophum (1) | | | | | | | +--Candidatus Magnetobacterium bavaricum (2) | | | | | | | +--Candidatus Nitrospira defluvii (1) | | | | | | | +--Thermodesulfovibrio yellowstonii DSM 11347 (1) | | | | | +--Nitrospirae bacterium GWC2_57_13 (1) | | | | | +--Nitrospirae bacterium CG1_02_44_142 (1) | | | | | +--Nitrospirae bacterium GWA2_42_11 (1) | | | | | +--Nitrospirae bacterium RIFCSPHIGHO2_02_FULL_40_19 (1) | | | | | +--Nitrospirae bacterium GWC2_57_9 (1) | | | | | +--Nitrospirae bacterium RBG_13_43_8 (1) | | | | | +--Nitrospirae bacterium CG2_30_41_42 (2) | | | | | +--Nitrospirae bacterium RBG_19FT_COMBO_42_15 (1) | | | | | +--Nitrospirae bacterium CG2_30_70_394 (1) | | | | | +--Nitrospirae bacterium RIFCSPHIGHO2_02_FULL_42_12 (1) | | | | | +--Nitrospirae bacterium GWC2_56_14 (1) | | | | | +--Nitrospirae bacterium RBG_19FT_COMBO_55_12 (1) | | | +--Deferribacteres (5) | | | | | +--Deferribacterales (4) | | | | | | | +--Calditerrivibrio nitroreducens DSM 19672 (1) | | | | | | | +--Deferribacteraceae (3) | | | | | | | +--Denitrovibrio acetiphilus DSM 12809 (1) | | | | | | | +--Flexistipes sinusarabici DSM 4947 (1) | | | | | | | +--Deferribacter desulfuricans SSM1 (1) | | | | | +--Deferribacteres (1) | | | | | +--Deferribacterales (1) | | | | | +--Deferribacteraceae (1) | | | | | +--Mucispirillum (1) | | | | | +--Mucispirillum schaedleri ASF457 (1) | | | +--Aquificae (5) | | | | | +--Aquificales (5) | | | | | +--Aquificaceae bacterium CR11 (1) | | | | | +--Aquificaceae (3) | | | | | | | +--Hydrogenobaculum sp. Y04AAS1 (1) | | | | | | | +--Aquifex aeolicus VF5 (1) | | | | | | | +--Hydrogenivirga sp. 128-5-R1-1 (1) | | | | | +--Hydrogenothermaceae (1) | | | | | +--Sulfurihydrogenibium azorense Az-Fu1 (1) | | | +--Actinobacteria (3) | | | | | +--Coriobacteridae (2) | | | | | | | +--Coriobacteriales (2) | | | | | | | +--Coriobacterineae (2) | | | | | | | +--Coriobacteriaceae (2) | | | | | | | +--Denitrobacterium detoxificans (1) | | | | | | | +--Eggerthella sp. YY7918 (1) | | | | | +--Actinobacteridae (1) | | | | | +--Actinomycetales (1) | | | | | +--Corynebacterineae (1) | | | | | +--Mycobacteriaceae (1) | | | | | +--Mycobacterium abscessus (1) | | | +--Proteobacteria (1823) | | | | | +--Acidithiobacillia (2) | | | | | | | +--Acidithiobacillales (2) | | | | | | | +--Acidithiobacillales bacterium SG8_45 (1) | | | | | | | +--Acidithiobacillales bacterium SM1_46 (1) | | | | | +--Thiobacillus prosperus (1) | | | | | +--Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_01_FULL_65_16 (1) | | | | | +--Candidatus Muproteobacteria bacterium RBG_16_60_9 (1) | | | | | +--Alphaproteobacteria (432) | | | | | | | +--Polymorphum gilvum SL003B-26A1 (1) | | | | | | | +--Rhizobiales bacterium WSM3557 (1) | | | | | | | +--Rhodospirillales (75) | | | | | | | | | +--unclassifiedRhodospirillales (6) | | | | | | | | | | | +--Rhodospirillales bacterium 70-18 (1) | | | | | | | | | | | +--Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 (1) | | | | | | | | | | | +--Rhodospirillales bacterium RIFCSPLOWO2_01_FULL_65_14 (1) | | | | | | | | | | | +--Rhodospirillales bacterium 69-11 (1) | | | | | | | | | | | +--Rhodospirillales bacterium 47_12_T64 (1) | | | | | | | | | | | +--Rhodospirillales bacterium SCN 65-16 (1) | | | | | | | | | +--Acetobacteraceae (37) | | | | | | | | | | | +--Acetobacteraceae bacterium SCN 69-10 (1) | | | | | | | | | | | +--Acetobacter (6) | | | | | | | | | | | | | +--Acetobacter sp. CAG:267 (1) | | | | | | | | | | | | | +--Acetobacter orientalis 21F-2 (1) | | | | | | | | | | | | | +--Acetobacter indonesiensis 5H-1 (1) | | | | | | | | | | | | | +--Acetobacter aceti NBRC 14818 (1) | | | | | | | | | | | | | +--Acetobacter syzygii 9H-2 (1) | | | | | | | | | | | | | +--Acetobacter orleanensis JCM 7639 (1) | | | | | | | | | | | +--Tanticharoenia (1) | | | | | | | | | | | | | +--Tanticharoenia sakaeratensis NBRC 103193 (1) | | | | | | | | | | | +--Saccharibacter sp. AM169 (1) | | | | | | | | | | | +--Gluconobacter morbifer G707 (1) | | | | | | | | | | | +--Komagataeibacter (1) | | | | | | | | | | | | | +--Komagataeibacter xylinus E25 (1) | | | | | | | | | | | +--Neoasaia chiangmaiensis (1) | | | | | | | | | | | +--Roseomonas cervicalis ATCC 49957 (1) | | | | | | | | | | | +--Acidiphilium rubrum (1) | | | | | | | | | | | +--Roseomonas mucosa (1) | | | | | | | | | | | +--Acidocella sp. MX-AZ02 (1) | | | | | | | | | | | +--Granulibacter bethesdensis CGDNIH1 (1) | | | | | | | | | | | +--Gluconacetobacter xylinus NBRC 3288 (1) | | | | | | | | | | | +--Acetobacteraceae bacterium AT-5844 (1) | | | | | | | | | | | +--Gluconacetobacter diazotrophicus PAl 5 (1) | | | | | | | | | | | +--Acidocella (1) | | | | | | | | | | | | | +--Acidocella aminolytica 101 = DSM 11237 (1) | | | | | | | | | | | +--Acetobacter persici (1) | | | | | | | | | | | +--Gluconobacter (1) | | | | | | | | | | | | | +--Gluconobacter oxydans H24 (1) | | | | | | | | | | | +--Kozakia baliensis (1) | | | | | | | | | | | +--Acidisphaera (1) | | | | | | | | | | | | | +--Acidisphaera rubrifaciens HS-AP3 (1) | | | | | | | | | | | +--Gluconobacter oxydans 621H (1) | | | | | | | | | | | +--Roseomonas rosea (1) | | | | | | | | | | | +--Gluconacetobacter sp. SXCC-1 (1) | | | | | | | | | | | +--Acetobacter tropicalis NBRC 101654 (1) | | | | | | | | | | | +--Gluconacetobacter hansenii ATCC 23769 (1) | | | | | | | | | | | +--Roseomonas deserti (1) | | | | | | | | | | | +--Acetobacter pasteurianus IFO 3283-01 (1) | | | | | | | | | | | +--Acidomonas (1) | | | | | | | | | | | | | +--Acidomonas methanolica NBRC 104435 (1) | | | | | | | | | | | +--Acidiphilium cryptum JF-5 (1) | | | | | | | | | | | +--Asaia (1) | | | | | | | | | | | | | +--Asaia platycodi SF2.1 (1) | | | | | | | | | | | +--Gluconacetobacter nataicola (1) | | | | | | | | | | | +--Acidiphilium (1) | | | | | | | | | | | +--Acidiphilium sp. CAG:727 (1) | | | | | | | | | +--Geminicoccaceae (1) | | | | | | | | | | | +--Arboriscoccus pini (1) | | | | | | | | | +--Rhodospirillaceae bacterium MC2UP-L3 (1) | | | | | | | | | +--Commensalibacter intestini A911 (1) | | | | | | | | | +--Rhodospirillaceae (29) | | | | | | | | | +--Azospirillum lipoferum (1) | | | | | | | | | +--Magnetospirillum marisnigri (1) | | | | | | | | | +--Azospirillum sp. B510 (1) | | | | | | | | | +--Thalassospira sp. HJ (1) | | | | | | | | | +--Magnetospirillum moscoviense (1) | | | | | | | | | +--Magnetospirillum magneticum AMB-1 (1) | | | | | | | | | +--Thalassospira (1) | | | | | | | | | | | +--Thalassospira xiamenensis M-5 = DSM 17429 (1) | | | | | | | | | +--Phaeospirillum (1) | | | | | | | | | | | +--Phaeospirillum molischianum DSM 120 (1) | | | | | | | | | +--Azospirillum brasilense Sp245 (1) | | | | | | | | | +--Azospirillum sp. 51_20 (1) | | | | | | | | | +--Azospirillum (1) | | | | | | | | | | | +--Azospirillum sp. CAG:239 (1) | | | | | | | | | +--Rhodospirillum centenum SW (1) | | | | | | | | | +--Thalassospira sp. MCCC 1A01428 (1) | | | | | | | | | +--Thalassospira sp. TSL5-1 (1) | | | | | | | | | +--Skermanella (2) | | | | | | | | | | | +--Skermanella aerolata KACC 11604 (1) | | | | | | | | | | | +--Skermanella stibiiresistens SB22 (1) | | | | | | | | | +--Magnetospira sp. QH-2 (1) | | | | | | | | | +--Azospirillum humicireducens (1) | | | | | | | | | +--Thalassospira alkalitolerans (1) | | | | | | | | | +--Pararhodospirillum (1) | | | | | | | | | | | +--Pararhodospirillum photometricum DSM 122 (1) | | | | | | | | | +--Magnetospirillum sp. XM-1 (1) | | | | | | | | | +--Caenispirillum (1) | | | | | | | | | | | +--Caenispirillum salinarum AK4 (1) | | | | | | | | | +--Azospirillum amazonense Y2 (1) | | | | | | | | | +--Haematospirillum jordaniae (1) | | | | | | | | | +--Inquilinus (1) | | | | | | | | | | | +--Inquilinus limosus MP06 (1) | | | | | | | | | +--Magnetospirillum sp. 64-120 (1) | | | | | | | | | +--Azospirillum lipoferum 4B (1) | | | | | | | | | +--Elstera litoralis (1) | | | | | | | | | +--Magnetospirillum (1) | | | | | | | | | +--Magnetospirillumgryphiswaldense (1) | | | | | | | | | +--Magnetospirillum gryphiswaldense MSR-1 v2 (1) | | | | | | | +--Rhizobiales bacterium 8.047 (1) | | | | | | | +--Parvularculales (1) | | | | | | | | | +--Parvularculaceae (1) | | | | | | | | | +--Parvularcula bermudensis HTCC2503 (1) | | | | | | | +--Sphingomonadales (29) | | | | | | | | | +--Sphingomonadaceae (14) | | | | | | | | | | | +--Sphingomonas sp. JJ-A5 (1) | | | | | | | | | | | +--Blastomonas sp. AAP25 (1) | | | | | | | | | | | +--Sphingomonas sp. TDK1 (1) | | | | | | | | | | | +--Sphingobium sp. EP60837 (1) | | | | | | | | | | | +--Sphingobium sp. MI1205 (1) | | | | | | | | | | | +--Sphingomonas sp. SCN 67-18 (1) | | | | | | | | | | | +--Sphingobium sp. GW456-12-10-14-TSB1 (1) | | | | | | | | | | | +--Citromicrobium sp. RCC1885 (1) | | | | | | | | | | | +--Sphingobium sp. AP49 (1) | | | | | | | | | | | +--Sphingobium baderi (1) | | | | | | | | | | | +--Sphingobium (1) | | | | | | | | | | | | | +--Sphingobium japonicum BiD32 (1) | | | | | | | | | | | +--Sphingomonas panacis (1) | | | | | | | | | | | +--Pacificimonas flava (1) | | | | | | | | | | | +--Sphingomonas (1) | | | | | | | | | | | +--Sphingomonas changbaiensis NBRC 104936 (1) | | | | | | | | | +--Erythrobacteraceae (13) | | | | | | | | | | | +--Porphyrobacter neustonensis (1) | | | | | | | | | | | +--Porphyrobacter mercurialis (1) | | | | | | | | | | | +--Altererythrobacter sp. JM27 (1) | | | | | | | | | | | +--Erythrobacter sp. HI0063 (1) | | | | | | | | | | | +--Porphyrobacter (1) | | | | | | | | | | | | | +--Porphyrobacter dokdonensis DSW-74 (1) | | | | | | | | | | | +--Porphyrobacter sp. LM 6 (1) | | | | | | | | | | | +--Erythrobacter sp. HI00D59 (1) | | | | | | | | | | | +--Erythrobacter sp. AP23 (1) | | | | | | | | | | | +--Erythrobacter sp. SCN 62-14 (1) | | | | | | | | | | | +--Porphyrobacter sp. AAP60 (1) | | | | | | | | | | | +--Erythrobacter sp. NAP1 (1) | | | | | | | | | | | +--Erythrobacter litoralis HTCC2594 (1) | | | | | | | | | | | +--Erythrobacter sp. K7-2 (1) | | | | | | | | | +--Sphingomonadales bacterium BRH_c42 (1) | | | | | | | | | +--Sphingomonadales bacterium RIFCSPHIGHO2_01_FULL_65_20 (1) | | | | | | | +--Sneathiellales (1) | | | | | | | | | +--Sneathiellaceae (1) | | | | | | | | | +--Sneathiella sp. BFLP-8 (1) | | | | | | | +--unclassifiedAlphaproteobacteria (18) | | | | | | | | | +--Alphaproteobacteria bacterium 33-17 (1) | | | | | | | | | +--Alphaproteobacteria bacterium 43-37 (1) | | | | | | | | | +--Alphaproteobacteria bacterium 64-11 (1) | | | | | | | | | +--Alphaproteobacteria bacterium RBG_16_64_48 (1) | | | | | | | | | +--Alphaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_46_13 (1) | | | | | | | | | +--Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 (1) | | | | | | | | | +--Alphaproteobacteria bacterium 65-37 (1) | | | | | | | | | +--Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8 (1) | | | | | | | | | +--alpha proteobacterium AAP38 (1) | | | | | | | | | +--Alphaproteobacteria bacterium 62-8 (1) | | | | | | | | | +--Alphaproteobacteria bacterium BRH_c36 (1) | | | | | | | | | +--Alphaproteobacteria bacterium CG1_02_46_17 (1) | | | | | | | | | +--alpha proteobacterium Q-1 (1) | | | | | | | | | +--Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12 (1) | | | | | | | | | +--Alphaproteobacteria bacterium GWF2_58_20 (1) | | | | | | | | | +--Alphaproteobacteria bacterium 65-7 (1) | | | | | | | | | +--Alphaproteobacteria bacterium GWC2_42_16 (1) | | | | | | | | | +--Alphaproteobacteria bacterium 41-28 (1) | | | | | | | +--Rhizobiales (233) | | | | | | | | | +--Bartonellaceae (9) | | | | | | | | | | | +--Bartonella apis (1) | | | | | | | | | | | +--Bartonella (5) | | | | | | | | | | | | | +--Bartonella quintana JK 73 (1) | | | | | | | | | | | | | +--Bartonella tamiae Th239 (1) | | | | | | | | | | | | | +--Bartonella australis Aust/NH1 (1) | | | | | | | | | | | | | +--Bartonella alsatica IBS 382 (1) | | | | | | | | | | | | | +--Bartonella taylorii 8TBB (1) | | | | | | | | | | | +--Bartonella bacilliformis KC583 (1) | | | | | | | | | | | +--Bartonella rochalimae ATCC BAA-1498 (1) | | | | | | | | | | | +--Bartonella clarridgeiae (1) | | | | | | | | | +--Brucellaceae (5) | | | | | | | | | | | +--Ochrobactrum (1) | | | | | | | | | | | | | +--Ochrobactrum intermedium 229E (1) | | | | | | | | | | | +--Brucella melitensis biovar Abortus 2308 (1) | | | | | | | | | | | +--Ochrobactrum pseudogrignonense (1) | | | | | | | | | | | +--Ochrobactrum sp. P6BS-III (1) | | | | | | | | | | | +--Ochrobactrum anthropi ATCC 49188 (1) | | | | | | | | | +--Methylocystaceae (1) | | | | | | | | | | | +--Methylosinus sp. 3S-1 (1) | | | | | | | | | +--Bradyrhizobiaceae bacterium SG-6C (1) | | | | | | | | | +--Aurantimonadaceae (13) | | | | | | | | | | | +--Martelella sp. AD-3 (1) | | | | | | | | | | | +--Aurantimonas manganoxydans SI85-9A1 (1) | | | | | | | | | | | +--Aureimonas sp. Leaf454 (1) | | | | | | | | | | | +--Aurantimonas ureilytica (1) | | | | | | | | | | | +--Aurantimonas altamirensis (1) | | | | | | | | | | | +--Aurantimonas sp. USBA 369 (1) | | | | | | | | | | | +--Martelella endophytica (1) | | | | | | | | | | | +--Aureimonas sp. Leaf324 (1) | | | | | | | | | | | +--Aurantimonas sp. 22II-16-19i (1) | | | | | | | | | | | +--Aureimonas sp. AU20 (1) | | | | | | | | | | | +--Fulvimarina pelagi HTCC2506 (1) | | | | | | | | | | | +--Aureimonas sp. Leaf460 (1) | | | | | | | | | | | +--Martelella (1) | | | | | | | | | | | +--Martelella mediterranea DSM 17316 (1) | | | | | | | | | +--Phyllobacteriaceae (32) | | | | | | | | | | | +--Mesorhizobium loti MAFF303099 (1) | | | | | | | | | | | +--Mesorhizobium sp. L48C026A00 (1) | | | | | | | | | | | +--Mesorhizobium sp. LC103 (1) | | | | | | | | | | | +--Mesorhizobium loti (1) | | | | | | | | | | | +--Mesorhizobium sp. ORS3428 (1) | | | | | | | | | | | +--Hoeflea olei (1) | | | | | | | | | | | +--Mesorhizobium australicum (1) | | | | | | | | | | | +--Mesorhizobium sp. LSHC420B00 (1) | | | | | | | | | | | +--Mesorhizobium amorphae CCNWGS0123 (1) | | | | | | | | | | | +--Hoeflea phototrophica DFL-43 (1) | | | | | | | | | | | +--Mesorhizobium sp. SOD10 (1) | | | | | | | | | | | +--Mesorhizobium ciceri biovar biserrulae WSM1271 (1) | | | | | | | | | | | +--Nitratireductor (2) | | | | | | | | | | | | | +--Nitratireductor aquibiodomus RA22 (1) | | | | | | | | | | | | | +--Nitratireductor indicus C115 (1) | | | | | | | | | | | +--Aminobacter sp. Root100 (1) | | | | | | | | | | | +--Parvibaculum lavamentivorans DS-1 (1) | | | | | | | | | | | +--Nitratireductor basaltis (1) | | | | | | | | | | | +--Nitratireductor sp. Pht-3B (1) | | | | | | | | | | | +--Mesorhizobium sp. B7 (1) | | | | | | | | | | | +--Hoeflea sp. BRH_c9 (1) | | | | | | | | | | | +--Mesorhizobium sp. UASWS1009 (1) | | | | | | | | | | | +--Paramesorhizobium deserti (1) | | | | | | | | | | | +--Mesorhizobium sp. Root157 (1) | | | | | | | | | | | +--Mesorhizobium (3) | | | | | | | | | | | | | +--Mesorhizobium huakuii 7653R (1) | | | | | | | | | | | | | +--Mesorhizobium metallidurans STM 2683 (1) | | | | | | | | | | | | | +--Mesorhizobium alhagi CCNWXJ12-2 (1) | | | | | | | | | | | +--Mesorhizobium sp. 65-26 (1) | | | | | | | | | | | +--Mesorhizobium loti R7A (1) | | | | | | | | | | | +--Hoeflea sp. BAL378 (1) | | | | | | | | | | | +--Hoeflea sp. IMCC20628 (1) | | | | | | | | | | | +--Mesorhizobium sp. LNHC252B00 (1) | | | | | | | | | | | +--Chelativorans sp. BNC1 (1) | | | | | | | | | +--unclassifiedRhizobiales (19) | | | | | | | | | | | +--Methyloceanibacter marginalis (1) | | | | | | | | | | | +--Methylobrevis pamukkalensis (1) | | | | | | | | | | | +--Rhizobiales bacterium 63-22 (1) | | | | | | | | | | | +--Rhizobiales bacterium 65-9 (1) | | | | | | | | | | | +--Rhizobiales bacterium TMED28 (1) | | | | | | | | | | | +--Methyloceanibacter caenitepidi (1) | | | | | | | | | | | +--Rhizobiales bacterium 62-47 (1) | | | | | | | | | | | +--Methyloceanibacter methanicus (1) | | | | | | | | | | | +--Rhizobiales bacterium HL-109 (1) | | | | | | | | | | | +--Rhizobiales bacterium 64-17 (1) | | | | | | | | | | | +--Methyloceanibacter superfactus (1) | | | | | | | | | | | +--Rhizobiales bacterium 62-17 (1) | | | | | | | | | | | +--Methyloligella halotolerans (1) | | | | | | | | | | | +--Rhizobiales bacterium TMED162 (1) | | | | | | | | | | | +--Rhizobiales bacterium TMED143 (1) | | | | | | | | | | | +--Rhizobiales bacterium 65-79 (1) | | | | | | | | | | | +--Rhizobiales bacterium TMED29 (1) | | | | | | | | | | | +--Pseudorhodoplanes sinuspersici (1) | | | | | | | | | | | +--Candidatus Tokpelaia hoelldoblerii (1) | | | | | | | | | +--Hyphomicrobiaceae (29) | | | | | | | | | | | +--Devosia chinhatensis (1) | | | | | | | | | | | +--Devosia sp. L15 (1) | | | | | | | | | | | +--Devosia sp. 66-22 (1) | | | | | | | | | | | +--Rhodomicrobium vannielii ATCC 17100 (1) | | | | | | | | | | | +--Prosthecomicrobium enhydrum (1) | | | | | | | | | | | +--Pelagibacterium halotolerans B2 (1) | | | | | | | | | | | +--Candidatus Filomicrobium marinum (1) | | | | | | | | | | | +--Devosia soli (1) | | | | | | | | | | | +--Devosia geojensis (1) | | | | | | | | | | | +--Devosia riboflavina (1) | | | | | | | | | | | +--Prosthecomicrobium hirschii (1) | | | | | | | | | | | +--Pelagibacterium sp. SCN 64-44 (2) | | | | | | | | | | | +--Pelagibacterium sp. SCN 63-23 (2) | | | | | | | | | | | +--Hyphomicrobium sp. NL23 (1) | | | | | | | | | | | +--Devosia sp. Root413D1 (1) | | | | | | | | | | | +--Rhodoplanes sp. Z2-YC6860 (1) | | | | | | | | | | | +--Hyphomicrobium denitrificans ATCC 51888 (1) | | | | | | | | | | | +--Devosia sp. H5989 (1) | | | | | | | | | | | +--Hyphomicrobium sulfonivorans (1) | | | | | | | | | | | +--Hyphomicrobium sp. MC1 (1) | | | | | | | | | | | +--Devosia sp. Cr7-05 (1) | | | | | | | | | | | +--Blastochloris viridis (1) | | | | | | | | | | | +--Devosia sp. S37 (1) | | | | | | | | | | | +--Devosia sp. 67-54 (1) | | | | | | | | | | | +--Devosia sp. LC5 (1) | | | | | | | | | | | +--Hyphomicrobium denitrificans 1NES1 (1) | | | | | | | | | | | +--Pelagibacterium sp. SCN 63-126 (1) | | | | | | | | | +--Rhodobiaceae (2) | | | | | | | | | | | +--Tepidicaulis marinus (1) | | | | | | | | | | | +--Candidatus Phaeomarinobacter ectocarpi (1) | | | | | | | | | +--Xanthobacteraceae (5) | | | | | | | | | | | +--Starkeya novella DSM 506 (1) | | | | | | | | | | | +--Xanthobacter autotrophicus Py2 (1) | | | | | | | | | | | +--Pseudolabrys sp. Root1462 (1) | | | | | | | | | | | +--Pseudoxanthobacter (1) | | | | | | | | | | | | | +--Pseudoxanthobacter soli DSM 19599 (1) | | | | | | | | | | | +--Azorhizobium caulinodans ORS 571 (1) | | | | | | | | | +--Rhizobiaceae (57) | | | | | | | | | | | +--Kaistia (1) | | | | | | | | | | | | | +--Kaistia soli DSM 19436 (1) | | | | | | | | | | | +--Shinella sp. 65-6 (1) | | | | | | | | | | | +--Shinella sp. HZN7 (1) | | | | | | | | | | | +--Shinella sp. DD12 (1) | | | | | | | | | | | +--Kaistia sp. SCN 65-12 (3) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (41) | | | | | | | | | | | | | +--Rhizobium sp. Leaf306 (1) | | | | | | | | | | | | | +--Rhizobium sp. CCNWSX0483 (1) | | | | | | | | | | | | | +--Rhizobium lusitanum (1) | | | | | | | | | | | | | +--Rhizobium sp. RU36D (1) | | | | | | | | | | | | | +--Rhizobium sp. Root149 (1) | | | | | | | | | | | | | +--Rhizobium sp. NT-26 (1) | | | | | | | | | | | | | +--Rhizobium sp. Leaf453 (1) | | | | | | | | | | | | | +--Rhizobium sp. R72 (1) | | | | | | | | | | | | | +--Rhizobium (3) | | | | | | | | | | | | | | | +--Rhizobiumgallicum (1) | | | | | | | | | | | | | | | | | +--Rhizobium gallicum bv. gallicum R602 (1) | | | | | | | | | | | | | | | +--Rhizobium freirei PRF 81 (1) | | | | | | | | | | | | | | | +--Rhizobium mesoamericanum STM3625 (1) | | | | | | | | | | | | | +--Rhizobium yanglingense (1) | | | | | | | | | | | | | +--Rhizobium rhizosphaerae (1) | | | | | | | | | | | | | +--Rhizobium etli CFN 42 (1) | | | | | | | | | | | | | +--Rhizobium sp. CF080 (1) | | | | | | | | | | | | | +--Agrobacterium (1) | | | | | | | | | | | | | | | +--Agrobacterium albertimagni AOL15 (1) | | | | | | | | | | | | | +--Rhizobium sp. 58 (1) | | | | | | | | | | | | | +--Pararhizobium polonicum (1) | | | | | | | | | | | | | +--Rhizobium sp. Root1212 (1) | | | | | | | | | | | | | +--Agrobacterium tumefaciens str. C58 (1) | | | | | | | | | | | | | +--Rhizobium sp. PDO1-076 (1) | | | | | | | | | | | | | +--Rhizobium sp. Root482 (1) | | | | | | | | | | | | | +--Rhizobium tibeticum (1) | | | | | | | | | | | | | +--Agrobacterium radiobacter K84 (1) | | | | | | | | | | | | | +--Rhizobium sp. Pop5 (1) | | | | | | | | | | | | | +--Rhizobium sp. YS-1r (1) | | | | | | | | | | | | | +--Rhizobium oryzae (1) | | | | | | | | | | | | | +--Agrobacterium sp. DSM 25559 (1) | | | | | | | | | | | | | +--Rhizobium oryziradicis (1) | | | | | | | | | | | | | +--Rhizobium sp. AC27/96 (1) | | | | | | | | | | | | | +--Rhizobium sp. CF142 (1) | | | | | | | | | | | | | +--Rhizobium sp. Leaf371 (1) | | | | | | | | | | | | | +--Pseudorhizobium pelagicum (1) | | | | | | | | | | | | | +--Rhizobium sp. Root708 (1) | | | | | | | | | | | | | +--Agrobacterium vitis S4 (1) | | | | | | | | | | | | | +--Rhizobium sp. 63-7 (2) | | | | | | | | | | | | | +--Rhizobium sp. Root564 (1) | | | | | | | | | | | | | +--Rhizobium sp. LC145 (1) | | | | | | | | | | | | | +--Rhizobium etli CNPAF512 (1) | | | | | | | | | | | | | +--Rhizobium sp. Root483D2 (1) | | | | | | | | | | | +--Sinorhizobium/Ensifergroup (9) | | | | | | | | | | | +--Sinorhizobium saheli (1) | | | | | | | | | | | +--Ensifer (1) | | | | | | | | | | | | | +--Ensifer adhaerens OV14 (1) | | | | | | | | | | | +--Ensifer sp. LCM 4579 (1) | | | | | | | | | | | +--Ensifer sp. Root278 (1) | | | | | | | | | | | +--Sinorhizobium meliloti 1021 (1) | | | | | | | | | | | +--Sinorhizobium sp. RAC02 (1) | | | | | | | | | | | +--Ensifer sp. YIC4027 (1) | | | | | | | | | | | +--Sinorhizobium fredii NGR234 (1) | | | | | | | | | | | +--Sinorhizobium fredii GR64 (1) | | | | | | | | | +--Methylobacteriaceae (14) | | | | | | | | | | | +--Methylobacterium sp. Leaf104 (1) | | | | | | | | | | | +--Methylobacterium radiotolerans JCM 2831 (1) | | | | | | | | | | | +--Methylobacterium sp. Leaf93 (1) | | | | | | | | | | | +--Methylobacterium sp. Leaf456 (1) | | | | | | | | | | | +--Methylobacterium sp. 4-46 (1) | | | | | | | | | | | +--Microvirga vignae (1) | | | | | | | | | | | +--Methylobacterium nodulans ORS 2060 (1) | | | | | | | | | | | +--Methylobacterium extorquens AM1 (1) | | | | | | | | | | | +--Microvirga sp. BSC39 (1) | | | | | | | | | | | +--Methylobacterium sp. Leaf99 (1) | | | | | | | | | | | +--Microvirga ossetica (1) | | | | | | | | | | | +--Methylobacterium sp. Leaf399 (1) | | | | | | | | | | | +--Methylobacterium tarhaniae (1) | | | | | | | | | | | +--Methylobacterium indicum (1) | | | | | | | | | +--Bradyrhizobiaceae (42) | | | | | | | | | | | +--Bosea sp. Root381 (1) | | | | | | | | | | | +--Bradyrhizobium sp. BR 10245 (1) | | | | | | | | | | | +--Bosea sp. 67-29 (1) | | | | | | | | | | | +--Bosea vaviloviae (1) | | | | | | | | | | | +--Bradyrhizobium sp. STM 3843 (1) | | | | | | | | | | | +--Bradyrhizobium sp. LTSP849 (1) | | | | | | | | | | | +--Bosea sp. AAP35 (1) | | | | | | | | | | | +--Bradyrhizobium japonicum USDA 110 (1) | | | | | | | | | | | +--Bradyrhizobium sp. Leaf396 (1) | | | | | | | | | | | +--Bosea sp. RAC05 (1) | | | | | | | | | | | +--Bradyrhizobium erythrophlei (1) | | | | | | | | | | | +--Bradyrhizobium sp. LTSP885 (1) | | | | | | | | | | | +--Afipia (1) | | | | | | | | | | | | | +--Afipia broomeae ATCC 49717 (1) | | | | | | | | | | | +--Rhodopseudomonas palustris BisB18 (1) | | | | | | | | | | | +--Rhodopseudomonas sp. R-45977 (1) | | | | | | | | | | | +--Afipia sp. 64-13 (1) | | | | | | | | | | | +--Bradyrhizobium lablabi (1) | | | | | | | | | | | +--Bosea sp. WAO (1) | | | | | | | | | | | +--Bradyrhizobium yuanmingense (1) | | | | | | | | | | | +--Bradyrhizobium sp. NAS80.1 (1) | | | | | | | | | | | +--Nitrobacter hamburgensis X14 (1) | | | | | | | | | | | +--Rhodopseudomonas palustris (1) | | | | | | | | | | | +--Afipia sp. GAS231 (1) | | | | | | | | | | | +--Afipia sp. P52-10 (1) | | | | | | | | | | | +--Bradyrhizobium elkanii (1) | | | | | | | | | | | +--Bradyrhizobium sp. ORS 278 (1) | | | | | | | | | | | +--Nitrobacter sp. 62-23 (1) | | | | | | | | | | | +--Bosea sp. Leaf344 (1) | | | | | | | | | | | +--Bradyrhizobium sp. AS23.2 (1) | | | | | | | | | | | +--Bosea sp. PAMC 26642 (1) | | | | | | | | | | | +--Bosea sp. TND4EK4 (1) | | | | | | | | | | | +--Bosea thiooxidans (1) | | | | | | | | | | | +--Afipia sp. 62-7 (1) | | | | | | | | | | | +--Bradyrhizobium sp. S23321 (1) | | | | | | | | | | | +--Nitrobacter winogradskyi Nb-255 (1) | | | | | | | | | | | +--Oligotropha carboxidovorans OM5 (1) | | | | | | | | | | | +--Bradyrhizobium sp. BR3351 (1) | | | | | | | | | | | +--Bosea sp. Root483D1 (1) | | | | | | | | | | | +--Bosea sp. LC85 (1) | | | | | | | | | | | +--Afipia sp. Root123D2 (1) | | | | | | | | | | | +--Rhodopseudomonas palustris CGA009 (1) | | | | | | | | | | | +--Nitrobacter sp. Nb-311A (1) | | | | | | | | | +--Phyllobacteriaceae bacterium AMV1 (1) | | | | | | | | | +--Beijerinckiaceae (3) | | | | | | | | | +--Methylocella silvestris BL2 (1) | | | | | | | | | +--Beijerinckia indica subsp. indica ATCC 9039 (1) | | | | | | | | | +--Chelatococcus sp. CO-6 (1) | | | | | | | +--Caulobacterales (19) | | | | | | | | | +--Caulobacterales bacterium RIFCSPHIGHO2_12_FULL_68_13 (1) | | | | | | | | | +--Caulobacterales bacterium RIFOXYB1_FULL_67_16 (1) | | | | | | | | | +--Caulobacterales bacterium RIFCSPHIGHO2_01_FULL_70_19 (1) | | | | | | | | | +--Caulobacterales bacterium RIFCSPHIGHO2_01_FULL_67_30 (1) | | | | | | | | | +--Caulobacteraceae (15) | | | | | | | | | +--Phenylobacterium sp. RIFCSPHIGHO2_01_FULL_70_10 (1) | | | | | | | | | +--Brevundimonas diminuta ATCC 11568 (1) | | | | | | | | | +--Caulobacter crescentus CB15 (1) | | | | | | | | | +--Caulobacteraceae bacterium OTSz_A_272 (1) | | | | | | | | | +--Brevundimonas sp. KM4 (1) | | | | | | | | | +--Phenylobacterium zucineum (1) | | | | | | | | | +--Brevundimonas sp. Leaf363 (1) | | | | | | | | | +--Asticcacaulis excentricus CB 48 (1) | | | | | | | | | +--Phenylobacterium sp. SCN 69-14 (1) | | | | | | | | | +--Phenylobacterium zucineum HLK1 (1) | | | | | | | | | +--Phenylobacterium sp. RIFCSPHIGHO2_01_FULL_69_31 (1) | | | | | | | | | +--Brevundimonas (1) | | | | | | | | | | | +--Brevundimonas abyssalis TAR-001 (1) | | | | | | | | | +--Phenylobacterium sp. Root1277 (1) | | | | | | | | | +--Brevundimonas sp. Root1423 (2) | | | | | | | +--Rickettsiales (13) | | | | | | | | | +--Candidatus Caedibacter acanthamoebae (1) | | | | | | | | | +--unclassifiedRickettsiales (2) | | | | | | | | | | | +--Rickettsiales bacterium Ac37b (1) | | | | | | | | | | | +--Candidatus Arcanobacter lacustris (1) | | | | | | | | | +--Rickettsiaceae (2) | | | | | | | | | | | +--Rickettsieae (2) | | | | | | | | | | | +--Rickettsia (2) | | | | | | | | | | | +--spottedfevergroup (1) | | | | | | | | | | | | | +--Rickettsia amblyommatis str. GAT-30V (1) | | | | | | | | | | | +--Rickettsia prowazekii str. Madrid E (1) | | | | | | | | | +--endosymbiont of Acanthamoeba sp. UWC8 (1) | | | | | | | | | +--Anaplasmataceae (7) | | | | | | | | | +--Anaplasma marginale str. Florida (1) | | | | | | | | | +--CandidatusNeoehrlichia (1) | | | | | | | | | | | +--Candidatus Neoehrlichia lotoris str. RAC413 (1) | | | | | | | | | +--Wolbachieae (4) | | | | | | | | | | | +--Wolbachia pipientis (1) | | | | | | | | | | | +--Wolbachia endosymbiont of Onchocerca ochengi (1) | | | | | | | | | | | +--Wolbachia (1) | | | | | | | | | | | | | +--Wolbachia endosymbiont of Drosophila simulans wNo (1) | | | | | | | | | | | +--Wolbachia endosymbiont of Glossina morsitans morsitans (1) | | | | | | | | | +--Anaplasma (1) | | | | | | | | | +--Anaplasma phagocytophilum HZ (1) | | | | | | | +--Holosporales (3) | | | | | | | | | +--unclassifiedHolosporales (1) | | | | | | | | | | | +--Caedibacter varicaedens (1) | | | | | | | | | +--Caedibacter sp. 37-49 (1) | | | | | | | | | +--Caedibacter sp. 38-128 (1) | | | | | | | +--Magnetococcales (2) | | | | | | | | | +--Magnetococcaceae (2) | | | | | | | | | +--Magnetofaba (2) | | | | | | | | | +--Magnetofaba australis IT-1 (2) | | | | | | | +--Kiloniellales (1) | | | | | | | | | +--Kiloniellaceae (1) | | | | | | | | | +--Kiloniella litopenaei (1) | | | | | | | +--Rhodobacterales (34) | | | | | | | +--Hyphomonadaceae (5) | | | | | | | | | +--Maricaulis maris MCS10 (1) | | | | | | | | | +--Hyphomonadaceae bacterium BRH_c29 (1) | | | | | | | | | +--Hirschia baltica ATCC 49814 (1) | | | | | | | | | +--Oceanicaulis sp. HTCC2633 (1) | | | | | | | | | +--Oceanicaulis sp. HLUCCA04 (1) | | | | | | | +--Rhodobacteraceae (29) | | | | | | | +--Sulfitobacter sp. CB2047 (1) | | | | | | | +--Roseibium sp. TrichSKD4 (1) | | | | | | | +--Labrenzia alexandrii DFL-11 (1) | | | | | | | +--Thioclava indica (1) | | | | | | | +--Rhodovulum sp. PH10 (1) | | | | | | | +--Labrenzia sp. YC6927 (1) | | | | | | | +--Sulfitobacter geojensis (1) | | | | | | | +--Rhodobacteraceae bacterium HLUCCA09 (1) | | | | | | | +--Paracoccus contaminans (1) | | | | | | | +--Haematobacter massiliensis (1) | | | | | | | +--Paracoccus sanguinis (1) | | | | | | | +--Oceanibulbus sp. HI0023 (1) | | | | | | | +--Rhodobacteraceae bacterium HLUCCA08 (1) | | | | | | | +--Wenxinia (1) | | | | | | | | | +--Wenxinia marina DSM 24838 (1) | | | | | | | +--Nesiotobacter exalbescens (1) | | | | | | | +--Labrenzia sp. C1B10 (1) | | | | | | | +--Roseobacter sp. GAI101 (1) | | | | | | | +--Ahrensia sp. R2A130 (1) | | | | | | | +--Rubellimicrobium (1) | | | | | | | | | +--Rubellimicrobium thermophilum DSM 16684 (1) | | | | | | | +--Pseudooceanicola flagellatus (1) | | | | | | | +--Dinoroseobacter shibae DFL 12 (1) | | | | | | | +--Roseovarius sp. 22II1-1F6A (1) | | | | | | | +--Rhodovulum sp. P5 (1) | | | | | | | +--Defluviimonas alba (1) | | | | | | | +--Pseudovibrio sp. FO-BEG1 (1) | | | | | | | +--Pannonibacter phragmitetus (1) | | | | | | | +--Oceanibulbus indolifex HEL-45 (1) | | | | | | | +--Oceanicola granulosus HTCC2516 (1) | | | | | | | +--Stappia sp. ES.058 (1) | | | | | +--Oligoflexia (12) | | | | | | | +--Oligoflexales (2) | | | | | | | | | +--Pseudobacteriovoracaceae (2) | | | | | | | | | +--Pseudobacteriovorax antillogorgiicola (2) | | | | | | | +--Bdellovibrionales (8) | | | | | | | | | +--Bdellovibrionales bacterium RIFOXYC1_FULL_39_130 (1) | | | | | | | | | +--Bdellovibrionales bacterium RIFOXYD1_FULL_55_31 (1) | | | | | | | | | +--Bdellovibrionales bacterium GWA1_52_35 (1) | | | | | | | | | +--Bdellovibrionales bacterium RIFCSPHIGHO2_01_FULL_40_29 (1) | | | | | | | | | +--Bdellovibrionales bacterium RBG_16_40_8 (1) | | | | | | | | | +--Bdellovibrionales bacterium GWB1_55_8 (1) | | | | | | | | | +--Bdellovibrionales bacterium RIFOXYD1_FULL_53_11 (1) | | | | | | | | | +--Bdellovibrionales bacterium RIFOXYD1_FULL_44_7 (1) | | | | | | | +--Bacteriovoracales (1) | | | | | | | | | +--Bacteriovoracaceae (1) | | | | | | | | | +--Bacteriovorax sp. MedPE-SWde (1) | | | | | | | +--Silvanigrellales (1) | | | | | | | +--Silvanigrellaceae (1) | | | | | | | +--Silvanigrella aquatica (1) | | | | | +--Deltaproteobacteria (66) | | | | | | | +--Desulfuromonadales (19) | | | | | | | | | +--Desulfuromonadaceae (1) | | | | | | | | | | | +--Desulfuromonas acetoxidans DSM 684 (1) | | | | | | | | | +--Pelobacteraceae (4) | | | | | | | | | | | +--Pelobacter acetylenicus (2) | | | | | | | | | | | +--Pelobacter carbinolicus DSM 2380 (1) | | | | | | | | | | | +--Pelobacter propionicus DSM 2379 (1) | | | | | | | | | +--Geobacteraceae (14) | | | | | | | | | +--Geobacter pickeringii (1) | | | | | | | | | +--Geobacter uraniireducens Rf4 (3) | | | | | | | | | +--Geobacter sp. FRC-32 (2) | | | | | | | | | +--Geobacter sulfurreducens PCA (1) | | | | | | | | | +--Geoalkalibacter subterraneus (2) | | | | | | | | | +--Geobacter sp. M18 (1) | | | | | | | | | +--Geobacter lovleyi SZ (1) | | | | | | | | | +--Geobacter metallireducens GS-15 (1) | | | | | | | | | +--Geobacter bemidjiensis Bem (2) | | | | | | | +--Syntrophobacterales (4) | | | | | | | | | +--Syntrophobacteraceae (1) | | | | | | | | | | | +--Syntrophobacter fumaroxidans MPOB (1) | | | | | | | | | +--Syntrophaceae (3) | | | | | | | | | +--Desulfobacca acetoxidans DSM 11109 (1) | | | | | | | | | +--Syntrophus aciditrophicus SB (1) | | | | | | | | | +--Desulfomonile tiedjei DSM 6799 (1) | | | | | | | +--Desulfovibrionales (19) | | | | | | | | | +--Desulfomicrobiaceae (1) | | | | | | | | | | | +--Desulfomicrobium baculatum DSM 4028 (1) | | | | | | | | | +--Desulfohalobiaceae (2) | | | | | | | | | | | +--Desulfohalobium retbaense DSM 5692 (1) | | | | | | | | | | | +--Desulfonatronospira thiodismutans ASO3-1 (1) | | | | | | | | | +--Desulfovibrionaceae (16) | | | | | | | | | +--Desulfovibrio sp. X2 (1) | | | | | | | | | +--Desulfovibrio vulgaris str. 'Miyazaki F' (1) | | | | | | | | | +--Desulfovibrio aespoeensis Aspo-2 (1) | | | | | | | | | +--Desulfovibrio sp. 6_1_46AFAA (1) | | | | | | | | | +--Desulfovibrio piger ATCC 29098 (1) | | | | | | | | | +--Desulfovibrio africanus str. Walvis Bay (1) | | | | | | | | | +--Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 (1) | | | | | | | | | +--Desulfovibrio alaskensis G20 (1) | | | | | | | | | +--Desulfovibrio sp. FW1012B (1) | | | | | | | | | +--Desulfovibrio salexigens DSM 2638 (1) | | | | | | | | | +--Bilophila wadsworthia 3_1_6 (1) | | | | | | | | | +--Desulfovibrio desulfuricans ND132 (1) | | | | | | | | | +--Desulfovibrio mexicanus (1) | | | | | | | | | +--Desulfovibrio magneticus RS-1 (1) | | | | | | | | | +--Lawsonia intracellularis PHE/MN1-00 (1) | | | | | | | | | +--Desulfovibrio vulgaris str. Hildenborough (1) | | | | | | | +--Desulfarculales (1) | | | | | | | | | +--Desulfarculaceae (1) | | | | | | | | | +--Desulfarculus baarsii DSM 2075 (1) | | | | | | | +--Myxococcales (11) | | | | | | | | | +--Sorangiineae (2) | | | | | | | | | | | +--Polyangiaceae (1) | | | | | | | | | | | | | +--Sorangium cellulosum 'So ce 56' (1) | | | | | | | | | | | +--Sandaracinaceae (1) | | | | | | | | | | | +--Sandaracinus amylolyticus (1) | | | | | | | | | +--Nannocystineae (2) | | | | | | | | | | | +--Nannocystaceae (1) | | | | | | | | | | | | | +--Plesiocystis pacifica SIR-1 (1) | | | | | | | | | | | +--Kofleriaceae (1) | | | | | | | | | | | +--Haliangium ochraceum DSM 14365 (1) | | | | | | | | | +--Cystobacterineae (5) | | | | | | | | | | | +--Cystobacteraceae (3) | | | | | | | | | | | | | +--Stigmatella aurantiaca DW4/3-1 (1) | | | | | | | | | | | | | +--Archangium gephyra (1) | | | | | | | | | | | | | +--Hyalangium minutum (1) | | | | | | | | | | | +--Myxococcaceae (2) | | | | | | | | | | | +--Myxococcus xanthus DK 1622 (1) | | | | | | | | | | | +--Anaeromyxobacter dehalogenans 2CP-C (1) | | | | | | | | | +--Enhygromyxa salina (1) | | | | | | | | | +--Sorangiineae bacterium SBNa008 (1) | | | | | | | +--Desulfobacterales (8) | | | | | | | | | +--Desulfobulbaceae (3) | | | | | | | | | | | +--Desulfobulbus propionicus DSM 2032 (1) | | | | | | | | | | | +--Desulfotalea psychrophila LSv54 (1) | | | | | | | | | | | +--Desulfurivibrio alkaliphilus AHT2 (1) | | | | | | | | | +--Desulfobacteraceae (5) | | | | | | | | | +--Desulfatibacillum alkenivorans AK-01 (1) | | | | | | | | | +--Desulfobacula toluolica Tol2 (1) | | | | | | | | | +--Desulfococcus oleovorans Hxd3 (1) | | | | | | | | | +--Desulfobacter postgatei 2ac9 (1) | | | | | | | | | +--Desulfobacterium autotrophicum HRM2 (1) | | | | | | | +--Bdellovibrionales (3) | | | | | | | | | +--Bacteriovoracaceae (1) | | | | | | | | | | | +--Bacteriovorax marinus SJ (1) | | | | | | | | | +--Bdellovibrionaceae (2) | | | | | | | | | +--Bdellovibrio bacteriovorus HD100 (1) | | | | | | | | | +--Bdellovibrio bacteriovorus (1) | | | | | | | +--Desulfurellales (1) | | | | | | | +--Desulfurellaceae (1) | | | | | | | +--Hippea maritima DSM 10411 (1) | | | | | +--Candidatus Muproteobacteria bacterium RBG_16_64_11 (1) | | | | | +--Betaproteobacteria (305) | | | | | | | +--unclassifiedBetaproteobacteria (28) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_65_20 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17 (1) | | | | | | | | | +--Betaproteobacteria bacterium MOLA814 (1) | | | | | | | | | +--beta proteobacterium AAP99 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_67_12 (1) | | | | | | | | | +--Candidatus Accumulibacter sp. BA-93 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 (1) | | | | | | | | | +--Betaproteobacteria bacterium SG8_40 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_19 (1) | | | | | | | | | +--Candidatus Accumulibacter aalborgensis (1) | | | | | | | | | +--Betaproteobacteria bacterium CG2_30_68_42 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 (1) | | | | | | | | | +--Betaproteobacteria bacterium GR16-43 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 (1) | | | | | | | | | +--Betaproteobacteria bacterium RBG_16_66_20 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 (1) | | | | | | | | | +--Candidatus Accumulibacter sp. SK-11 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 (1) | | | | | | | | | +--Betaproteobacteria bacterium SG8_41 (1) | | | | | | | | | +--Betaproteobacteria bacterium RBG_16_64_9 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_65_24 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 (1) | | | | | | | | | +--Candidatus Accumulibacter sp. SK-12 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 (1) | | | | | | | | | +--Betaproteobacteria bacterium SG8_39 (1) | | | | | | | | | +--Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13 (1) | | | | | | | +--Methylophilales (1) | | | | | | | | | +--Methylophilaceae (1) | | | | | | | | | +--Methylobacillus sp. MM2 (1) | | | | | | | +--Burkholderiales (175) | | | | | | | | | +--Thiomonas sp. S10 (1) | | | | | | | | | +--Alcaligenaceae (30) | | | | | | | | | | | +--Oligella (1) | | | | | | | | | | | | | +--Oligella urethralis DNF00040 (1) | | | | | | | | | | | +--Bordetella sp. AU3182 (1) | | | | | | | | | | | +--Basilea (1) | | | | | | | | | | | | | +--Basilea psittacipulmonis DSM 24701 (1) | | | | | | | | | | | +--Bordetella genomosp. 9 (1) | | | | | | | | | | | +--Bordetella ansorpii (1) | | | | | | | | | | | +--Bordetella pertussis Tohama I (1) | | | | | | | | | | | +--Achromobacter xylosoxidans A8 (1) | | | | | | | | | | | +--Alcaligenes sp. EGD-AK7 (1) | | | | | | | | | | | +--Candidimonas nitroreducens (1) | | | | | | | | | | | +--Bordetella hinzii (1) | | | | | | | | | | | +--Achromobacter xylosoxidans AXX-A (1) | | | | | | | | | | | +--Bordetella sp. AU7206 (1) | | | | | | | | | | | +--Bordetella sp. SCN 67-23 (1) | | | | | | | | | | | +--Bordetella sp. N (1) | | | | | | | | | | | +--Bordetella petrii (1) | | | | | | | | | | | +--Kerstersia gyiorum (1) | | | | | | | | | | | +--Bordetella sp. H567 (1) | | | | | | | | | | | +--Castellaniella (1) | | | | | | | | | | | | | +--Castellaniella defragrans 65Phen (1) | | | | | | | | | | | +--Pusillimonas sp. T7-7 (1) | | | | | | | | | | | +--Bordetella sp. AU10664 (1) | | | | | | | | | | | +--Bordetella trematum (1) | | | | | | | | | | | +--Orrella dioscoreae (1) | | | | | | | | | | | +--Bordetella avium 197N (1) | | | | | | | | | | | +--Achromobacter piechaudii ATCC 43553 (1) | | | | | | | | | | | +--Achromobacter sp. DMS1 (2) | | | | | | | | | | | +--Paenalcaligenes hominis (1) | | | | | | | | | | | +--Bordetella genomosp. 8 (1) | | | | | | | | | | | +--Advenella (1) | | | | | | | | | | | | | +--Advenella mimigardefordensis DPN7 (1) | | | | | | | | | | | +--Achromobacter (1) | | | | | | | | | | | +--Achromobacter piechaudii HLE (1) | | | | | | | | | +--Oxalobacteraceae bacterium IMCC9480 (1) | | | | | | | | | +--Alcaligenaceae bacterium BZ59 (1) | | | | | | | | | +--Roseateles aquatilis (1) | | | | | | | | | +--Roseateles depolymerans (1) | | | | | | | | | +--Thiomonas delicata (1) | | | | | | | | | +--unclassifiedBurkholderiales (14) | | | | | | | | | | | +--Burkholderiales bacterium GWF1_66_17 (1) | | | | | | | | | | | +--Burkholderiales bacterium GJ-E10 (1) | | | | | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_99 (1) | | | | | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 (1) | | | | | | | | | | | +--Burkholderiales bacterium 70-64 (1) | | | | | | | | | | | +--BurkholderialesGeneraincertaesedis (7) | | | | | | | | | | | | | +--Rhizobacter sp. Root1221 (1) | | | | | | | | | | | | | +--Rhizobacter sp. Root404 (1) | | | | | | | | | | | | | +--Mitsuaria sp. 7 (1) | | | | | | | | | | | | | +--Rhizobacter sp. Root29 (1) | | | | | | | | | | | | | +--Rubrivivax sp. SCN 70-15 (1) | | | | | | | | | | | | | +--Xylophilus sp. Leaf220 (1) | | | | | | | | | | | | | +--Paucibacter sp. KCTC 42545 (1) | | | | | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_12_FULL_65_40 (1) | | | | | | | | | | | +--Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_69_20 (1) | | | | | | | | | +--Oxalobacteraceae (30) | | | | | | | | | | | +--Janthinobacterium sp. CG23_2 (1) | | | | | | | | | | | +--Oxalobacter formigenes HOxBLS (1) | | | | | | | | | | | +--Massilia sp. Leaf139 (1) | | | | | | | | | | | +--Duganella sp. Leaf126 (1) | | | | | | | | | | | +--Herbaspirillum sp. HZ10 (1) | | | | | | | | | | | +--Massilia sp. KIM (1) | | | | | | | | | | | +--Massilia sp. JS1662 (1) | | | | | | | | | | | +--Janthinobacterium sp. KBS0711 (1) | | | | | | | | | | | +--Janthinobacterium sp. Marseille (1) | | | | | | | | | | | +--Herminiimonas arsenicoxydans (1) | | | | | | | | | | | +--Herbaspirillum seropedicae SmR1 (1) | | | | | | | | | | | +--Janthinobacterium (1) | | | | | | | | | | | | | +--Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 (1) | | | | | | | | | | | +--Janthinobacterium sp. B9-8 (1) | | | | | | | | | | | +--Herbaspirillum sp. TSA66 (1) | | | | | | | | | | | +--Oxalobacter formigenes OXCC13 (1) | | | | | | | | | | | +--Collimonas fungivorans Ter331 (1) | | | | | | | | | | | +--Duganella sp. Sac-22 (1) | | | | | | | | | | | +--Herbaspirillum sp. YR522 (1) | | | | | | | | | | | +--Massilia sp. LC238 (1) | | | | | | | | | | | +--Massilia (1) | | | | | | | | | | | | | +--Massilia timonae CCUG 45783 (1) | | | | | | | | | | | +--Massilia sp. CF038 (1) | | | | | | | | | | | +--Noviherbaspirillum sp. Root189 (1) | | | | | | | | | | | +--Janthinobacterium sp. HH01 (1) | | | | | | | | | | | +--Massilia sp. NR 4-1 (1) | | | | | | | | | | | +--Duganella sp. Root198D2 (1) | | | | | | | | | | | +--Herbaspirillum sp. CF444 (1) | | | | | | | | | | | +--Massilia sp. WF1 (1) | | | | | | | | | | | +--Collimonas arenae (1) | | | | | | | | | | | +--Massilia sp. Root351 (1) | | | | | | | | | | | +--Massilia sp. BSC265 (1) | | | | | | | | | +--Advenella kashmirensis WT001 (1) | | | | | | | | | +--Burkholderiaceae (72) | | | | | | | | | | | +--Burkholderia xenovorans LB400 (1) | | | | | | | | | | | +--Ralstonia sp. PBA (1) | | | | | | | | | | | +--Burkholderia fungorum (1) | | | | | | | | | | | +--Burkholderia sp. ST111 (1) | | | | | | | | | | | +--Burkholderia glathei (1) | | | | | | | | | | | +--Paraburkholderia sp. SOS3 (1) | | | | | | | | | | | +--Burkholderia phenazinium (1) | | | | | | | | | | | +--Caballeronia peredens (1) | | | | | | | | | | | +--Burkholderia sp. SRS-W-2-2016 (1) | | | | | | | | | | | +--Ralstonia pickettii 12J (1) | | | | | | | | | | | +--Paraburkholderia piptadeniae (1) | | | | | | | | | | | +--Cupriavidus metallidurans CH34 (1) | | | | | | | | | | | +--Burkholderia caryophylli (1) | | | | | | | | | | | +--Cupriavidus sp. UYMMa02A (1) | | | | | | | | | | | +--Candidatus Burkholderia calva (1) | | | | | | | | | | | +--Burkholderia terricola (1) | | | | | | | | | | | +--Cupriavidus basilensis (1) | | | | | | | | | | | +--Burkholderia sp. SD3175 (1) | | | | | | | | | | | +--Chitinimonas (1) | | | | | | | | | | | | | +--Chitinimonas taiwanensis DSM 18899 (1) | | | | | | | | | | | +--Pandoraea pnomenusa (1) | | | | | | | | | | | +--Burkholderia rhizoxinica HKI 454 (1) | | | | | | | | | | | +--Burkholderia (8) | | | | | | | | | | | | | +--Burkholderia pseudomallei K96243 (1) | | | | | | | | | | | | | +--Burkholderia sp. TSV86 (1) | | | | | | | | | | | | | +--Burkholderia latens (1) | | | | | | | | | | | | | +--Burkholderia vietnamiensis G4 (1) | | | | | | | | | | | | | +--Burkholderia multivorans ATCC 17616 (1) | | | | | | | | | | | | | +--Burkholderia glumae PG1 (1) | | | | | | | | | | | | | +--Burkholderia cenocepacia J2315 (1) | | | | | | | | | | | | | +--Burkholderia singularis (1) | | | | | | | | | | | +--Burkholderia sp. Bk (1) | | | | | | | | | | | +--Caballeronia (1) | | | | | | | | | | | | | +--Caballeronia glathei PML1(12) (1) | | | | | | | | | | | +--Burkholderia sp. RPE64 (1) | | | | | | | | | | | +--Cupriavidus sp. USMAA2-4 (1) | | | | | | | | | | | +--Burkholderia sp. lig30 (1) | | | | | | | | | | | +--Polynucleobacter sp. VK13 (1) | | | | | | | | | | | +--Polynucleobacter duraquae (1) | | | | | | | | | | | +--Candidatus Burkholderia verschuerenii (1) | | | | | | | | | | | +--Burkholderia sp. CCGE1003 (1) | | | | | | | | | | | +--Paraburkholderia ribeironis (1) | | | | | | | | | | | +--Candidatus Burkholderia kirkii UZHbot1 (1) | | | | | | | | | | | +--Burkholderia sp. MR1 (1) | | | | | | | | | | | +--Burkholderia sp. LMG 22936 (1) | | | | | | | | | | | +--Burkholderia sp. TJI49 (1) | | | | | | | | | | | +--Burkholderia phymatum STM815 (1) | | | | | | | | | | | +--Burkholderia gladioli BSR3 (1) | | | | | | | | | | | +--Cupriavidus sp. SK-3 (1) | | | | | | | | | | | +--Candidatus Burkholderia schumannianae (1) | | | | | | | | | | | +--Burkholderia glumae BGR1 (1) | | | | | | | | | | | +--Polynucleobacter necessarius subsp. necessarius STIR1 (1) | | | | | | | | | | | +--Caballeronia calidae (1) | | | | | | | | | | | +--Burkholderia sp. ATSB16 (1) | | | | | | | | | | | +--Limnobacter sp. MED105 (1) | | | | | | | | | | | +--Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 (1) | | | | | | | | | | | +--Burkholderia sp. LMG 22934 (1) | | | | | | | | | | | +--Lautropia sp. SCN 69-89 (1) | | | | | | | | | | | +--Ralstonia solanacearum GMI1000 (1) | | | | | | | | | | | +--Paraburkholderia susongensis (1) | | | | | | | | | | | +--Paraburkholderia ginsengiterrae (1) | | | | | | | | | | | +--Burkholderia sp. H160 (1) | | | | | | | | | | | +--Burkholderia sp. AD24 (1) | | | | | | | | | | | +--Ralstonia eutropha H16 (1) | | | | | | | | | | | +--Caballeronia udeis (1) | | | | | | | | | | | +--Burkholderia andropogonis (1) | | | | | | | | | | | +--Burkholderia sp. OLGA172 (1) | | | | | | | | | | | +--Burkholderia sacchari (1) | | | | | | | | | | | +--Polynucleobacter sphagniphilus (1) | | | | | | | | | | | +--Burkholderia sp. LMG 22940 (1) | | | | | | | | | | | +--Ralstonia eutropha JMP134 (1) | | | | | | | | | | | +--Burkholderia sp. Leaf177 (1) | | | | | | | | | | | +--Burkholderia caribensis (1) | | | | | | | | | | | +--Burkholderia tropica (1) | | | | | | | | | | | +--Burkholderia ubonensis (1) | | | | | | | | | +--Methylibium petroleiphilum PM1 (1) | | | | | | | | | +--Comamonadaceae (21) | | | | | | | | | +--Limnohabitans (1) | | | | | | | | | | | +--Limnohabitans planktonicus II-D5 (1) | | | | | | | | | +--Limnohabitans sp. 103DPR2 (1) | | | | | | | | | +--Polaromonas naphthalenivorans CJ2 (1) | | | | | | | | | +--Ramlibacter tataouinensis TTB310 (1) | | | | | | | | | +--Acidovorax delafieldii 2AN (1) | | | | | | | | | +--Variovorax sp. JS1663 (1) | | | | | | | | | +--Hydrogenophaga sp. H7 (1) | | | | | | | | | +--Hydrogenophaga sp. T4 (1) | | | | | | | | | +--Polaromonas sp. CG9_12 (1) | | | | | | | | | +--Acidovorax sp. CF316 (1) | | | | | | | | | +--CandidatusSymbiobacter (1) | | | | | | | | | | | +--Candidatus Symbiobacter mobilis CR (1) | | | | | | | | | +--Hydrogenophaga crassostreae (1) | | | | | | | | | +--Hydrogenophaga sp. A37 (1) | | | | | | | | | +--Hydrogenophaga sp. IBVHS1 (1) | | | | | | | | | +--Hydrogenophaga sp. Root209 (1) | | | | | | | | | +--Acidovorax sp. JS42 (1) | | | | | | | | | +--Limnohabitans sp. 63ED37-2 (1) | | | | | | | | | +--Alicycliphilus denitrificans K601 (1) | | | | | | | | | +--Acidovorax sp. NA3 (1) | | | | | | | | | +--Acidovorax sp. SCN 68-22 (1) | | | | | | | | | +--Polaromonas sp. CF318 (1) | | | | | | | +--Rhodocyclales (18) | | | | | | | | | +--Rhodocyclaceae (16) | | | | | | | | | | | +--Thauera sp. 27 (1) | | | | | | | | | | | +--Azoarcus sp. BH72 (1) | | | | | | | | | | | +--Thauera (2) | | | | | | | | | | | | | +--Thauera linaloolentis 47Lol = DSM 12138 (1) | | | | | | | | | | | | | +--Thauera terpenica 58Eu (1) | | | | | | | | | | | +--Dechlorosoma suillum PS (1) | | | | | | | | | | | +--Thauera chlorobenzoica (1) | | | | | | | | | | | +--Dechloromonas denitrificans (1) | | | | | | | | | | | +--Methyloversatilis sp. RAC08 (1) | | | | | | | | | | | +--Methyloversatilis universalis FAM5 (1) | | | | | | | | | | | +--Azonexus hydrophilus (1) | | | | | | | | | | | +--Dechloromonas aromatica RCB (1) | | | | | | | | | | | +--Sulfuritalea (1) | | | | | | | | | | | | | +--Sulfuritalea hydrogenivorans sk43H (1) | | | | | | | | | | | +--Thauera sp. 63 (1) | | | | | | | | | | | +--Petrobacter sp. JHK30 (1) | | | | | | | | | | | +--Candidatus Propionivibrio aalborgensis (1) | | | | | | | | | | | +--Thauera sp. MZ1T (1) | | | | | | | | | +--Rhodocyclales bacterium GWA2_65_20 (1) | | | | | | | | | +--Rhodocyclales bacterium RIFCSPLOWO2_02_FULL_63_24 (1) | | | | | | | +--Sulfuricellales (1) | | | | | | | | | +--Sulfuricellaceae (1) | | | | | | | | | +--Sulfuricella (1) | | | | | | | | | +--Sulfuricella denitrificans skB26 (1) | | | | | | | +--Candidatus Accumulibacter phosphatis clade IIA str. UW-1 (1) | | | | | | | +--Burkholderiales bacterium JOSHI_001 (1) | | | | | | | +--Gallionellales (4) | | | | | | | | | +--Gallionellaceae (4) | | | | | | | | | +--Sideroxydans lithotrophicus ES-1 (1) | | | | | | | | | +--Gallionella capsiferriformans ES-2 (1) | | | | | | | | | +--Ferriphaselus amnicola (1) | | | | | | | | | +--Candidatus Gallionella acididurans (1) | | | | | | | +--Ferrovales (2) | | | | | | | | | +--Ferrovaceae (2) | | | | | | | | | +--Ferrovum sp. Z-31 (1) | | | | | | | | | +--Ferrovum sp. JA12 (1) | | | | | | | +--Neisseriales (40) | | | | | | | | | +--Chromobacteriaceae (8) | | | | | | | | | | | +--Jeongeupia sp. USM3 (1) | | | | | | | | | | | +--Vogesella sp. EB (1) | | | | | | | | | | | +--Aquaspirillum sp. LM1 (1) | | | | | | | | | | | +--Vogesella sp. LIG4 (1) | | | | | | | | | | | +--Chromobacteriumgroup (3) | | | | | | | | | | | | | +--Chromobacterium sp. LK11 (1) | | | | | | | | | | | | | +--Chromobacterium sphagni (1) | | | | | | | | | | | | | +--Chromobacterium amazonense (1) | | | | | | | | | | | +--Andreprevotia (1) | | | | | | | | | | | +--Andreprevotia lacus DSM 23236 (1) | | | | | | | | | +--Neisseriaceae (32) | | | | | | | | | +--Kingella kingae ATCC 23330 (1) | | | | | | | | | +--Neisseria weaveri LMG 5135 (1) | | | | | | | | | +--Neisseria bacilliformis ATCC BAA-1200 (1) | | | | | | | | | +--Neisseria mucosa C102 (1) | | | | | | | | | +--Pseudogulbenkiania sp. NH8B (1) | | | | | | | | | +--Eikenella corrodens ATCC 23834 (1) | | | | | | | | | +--Snodgrassella (4) | | | | | | | | | | | +--Snodgrassella alvi SCGC AB-598-O02 (1) | | | | | | | | | | | +--Snodgrassella alvi SCGC AB-598-O11 (1) | | | | | | | | | | | +--Snodgrassella alvi SCGC AB-598-P14 (1) | | | | | | | | | | | +--Snodgrassella alvi wkB2 (1) | | | | | | | | | +--Simonsiella muelleri ATCC 29453 (1) | | | | | | | | | +--Neisseria zoodegmatis (1) | | | | | | | | | +--Neisseria (1) | | | | | | | | | | | +--Neisseria sp. oral taxon 020 str. F0370 (1) | | | | | | | | | +--Crenobacter luteus (1) | | | | | | | | | +--Neisseria wadsworthii 9715 (1) | | | | | | | | | +--Aquitalea magnusonii (1) | | | | | | | | | +--Chromobacterium aquaticum (1) | | | | | | | | | +--Neisseria gonorrhoeae FA 1090 (1) | | | | | | | | | +--Neisseria mucosa ATCC 25996 (1) | | | | | | | | | +--Neisseria meningitidis MC58 (1) | | | | | | | | | +--Kingella denitrificans ATCC 33394 (1) | | | | | | | | | +--Neisseria sp. 10023 (1) | | | | | | | | | +--Neisseria dentiae (1) | | | | | | | | | +--Neisseria elongata subsp. glycolytica ATCC 29315 (1) | | | | | | | | | +--Kingella oralis ATCC 51147 (1) | | | | | | | | | +--Laribacter hongkongensis HLHK9 (1) | | | | | | | | | +--Neisseria arctica (1) | | | | | | | | | +--Neisseria shayeganii 871 (1) | | | | | | | | | +--Snodgrassella alvi (1) | | | | | | | | | +--Neisseria animaloris (1) | | | | | | | | | +--Chromobacterium violaceum ATCC 12472 (1) | | | | | | | | | +--Neisseriaceae bacterium IGB-41 (1) | | | | | | | +--[Polyangium] brachysporum (1) | | | | | | | +--Nitrosomonadales (27) | | | | | | | | | +--Gallionellales bacterium RIFOXYB12_FULL_54_9 (1) | | | | | | | | | +--Gallionellales bacterium RIFCSPLOWO2_02_FULL_57_47 (1) | | | | | | | | | +--Thiobacillaceae (4) | | | | | | | | | | | +--Thiobacillus sp. 65-1059 (1) | | | | | | | | | | | +--Thiobacillus sp. 65-29 (1) | | | | | | | | | | | +--Thiobacillus sp. GWE1_62_9 (1) | | | | | | | | | | | +--Thiobacillus sp. SCN 63-57 (1) | | | | | | | | | +--Gallionellales bacterium GWA2_60_142 (1) | | | | | | | | | +--Gallionellales bacterium GWA2_55_18 (1) | | | | | | | | | +--Gallionellales bacterium GWA2_60_18 (1) | | | | | | | | | +--Gallionellales bacterium RIFCSPLOWO2_12_FULL_59_22 (2) | | | | | | | | | +--Nitrosomonadaceae (11) | | | | | | | | | | | +--Nitrosomonas eutropha C91 (1) | | | | | | | | | | | +--Nitrosospira multiformis ATCC 25196 (1) | | | | | | | | | | | +--Nitrosomonas communis (1) | | | | | | | | | | | +--Nitrosospira sp. 56-18 (1) | | | | | | | | | | | +--Nitrosovibrio sp. Nv17 (1) | | | | | | | | | | | +--Nitrosospira briensis (1) | | | | | | | | | | | +--Nitrosospira sp. NpAV (1) | | | | | | | | | | | +--Nitrosospira sp. Nsp11 (1) | | | | | | | | | | | +--Nitrosomonas sp. AL212 (1) | | | | | | | | | | | +--Nitrosomonas europaea ATCC 19718 (1) | | | | | | | | | | | +--Nitrosomonas sp. Is79A3 (1) | | | | | | | | | +--Gallionellales bacterium RIFCSPLOWO2_02_60_31 (1) | | | | | | | | | +--Gallionellales bacterium RIFCSPHIGHO2_02_FULL_57_16 (2) | | | | | | | | | +--Gallionellales bacterium RBG_16_56_9 (2) | | | | | | | +--Hydrogenophilales (6) | | | | | | | +--Hydrogenophilaceae (6) | | | | | | | +--Thiobacillus sp. SCN 64-317 (1) | | | | | | | +--Thiobacillus sp. SCN 65-179 (1) | | | | | | | +--Thiobacillus sp. SCN 63-374 (1) | | | | | | | +--Thiobacillus sp. SCN 63-1177 (1) | | | | | | | +--Thiobacillus denitrificans (1) | | | | | | | +--Thiobacillus denitrificans ATCC 25259 (1) | | | | | +--unclassifiedProteobacteria (8) | | | | | | | +--Proteobacteria bacterium CG1_02_64_396 (1) | | | | | | | +--Proteobacteria bacterium SG_bin9 (1) | | | | | | | +--Proteobacteria bacterium ST_bin11 (1) | | | | | | | +--Proteobacteria bacterium SG_bin4 (1) | | | | | | | +--Proteobacteria bacterium HN_bin10 (1) | | | | | | | +--Proteobacteria bacterium ST_bin16 (1) | | | | | | | +--Proteobacteria bacterium SG_bin7 (1) | | | | | | | +--Proteobacteria bacterium SG_bin8 (1) | | | | | +--gamma proteobacterium HTCC5015 (1) | | | | | +--alpha proteobacterium USBA 355 (1) | | | | | +--delta proteobacterium MLMS-1 (1) | | | | | +--Candidatus Lambdaproteobacteria bacterium RIFOXYD2_FULL_56_26 (1) | | | | | +--Candidatus Muproteobacteria bacterium RBG_19FT_COMBO_61_10 (1) | | | | | +--gamma proteobacterium NOR51-B (1) | | | | | +--gamma proteobacterium IMCC2047 (1) | | | | | +--gamma proteobacterium HdN1 (1) | | | | | +--Candidatus Muproteobacteria bacterium RBG_16_62_13 (1) | | | | | +--delta/epsilonsubdivisions (163) | | | | | | | +--Deltaproteobacteria (163) | | | | | | | +--Desulfuromonadales (25) | | | | | | | | | +--Desulfuromonadaceae (11) | | | | | | | | | | | +--Desulfuromonadaceae bacterium GWC2_58_13 (2) | | | | | | | | | | | +--Malonomonas (2) | | | | | | | | | | | | | +--Malonomonas rubra DSM 5091 (2) | | | | | | | | | | | +--Desulfuromonas sp. SDB (1) | | | | | | | | | | | +--Pelobacter sp. SFB93 (2) | | | | | | | | | | | +--Desulfuromonas sp. DDH964 (2) | | | | | | | | | | | +--Desulfuromonas soudanensis (2) | | | | | | | | | +--Desulfuromonadales bacterium GWD2_54_10 (1) | | | | | | | | | +--Desulfuromonadales bacterium C00003093 (2) | | | | | | | | | +--Desulfuromonadales bacterium GWD2_61_12 (1) | | | | | | | | | +--Geobacteraceae (9) | | | | | | | | | | | +--Geobacter sp. OR-1 (2) | | | | | | | | | | | +--Geobacteraceae bacterium GWB2_52_12 (1) | | | | | | | | | | | +--Geoalkalibacter (3) | | | | | | | | | | | | | +--Geoalkalibacter ferrihydriticus DSM 17813 (3) | | | | | | | | | | | +--Geobacteraceae bacterium GWC2_58_44 (1) | | | | | | | | | | | +--Geothermobacter sp. EPR-M (2) | | | | | | | | | +--Desulfuromonadales bacterium C00003096 (1) | | | | | | | +--Syntrophobacterales (16) | | | | | | | | | +--Syntrophobacteraceae (4) | | | | | | | | | | | +--Syntrophobacteraceae bacterium CG2_30_61_12 (1) | | | | | | | | | | | +--Syntrophobacter sp. DG_60 (1) | | | | | | | | | | | +--Desulfacinum (2) | | | | | | | | | | | +--Desulfacinum hydrothermale DSM 13146 (1) | | | | | | | | | | | +--Desulfacinum infernum DSM 9756 (1) | | | | | | | | | +--Syntrophobacterales bacterium GWC2_56_13 (1) | | | | | | | | | +--Syntrophaceae (10) | | | | | | | | | | | +--Smithella sp. SDB (1) | | | | | | | | | | | +--Smithella sp. F21 (1) | | | | | | | | | | | +--Smithella sp. D17 (1) | | | | | | | | | | | +--Smithella sp. SCADC (1) | | | | | | | | | | | +--Smithella sp. ME-1 (1) | | | | | | | | | | | +--Syntrophus sp. RIFOXYC2_FULL_54_9 (1) | | | | | | | | | | | +--Syntrophus sp. GWC2_56_31 (1) | | | | | | | | | | | +--Syntrophaceae bacterium CG2_30_49_12 (1) | | | | | | | | | | | +--Desulfobacca sp. 4484_104 (1) | | | | | | | | | | | +--Syntrophaceae bacterium CG2_30_58_14 (1) | | | | | | | | | +--Syntrophobacterales bacterium RBG_19FT_COMBO_59_10 (1) | | | | | | | +--Myxococcales (9) | | | | | | | | | +--unclassifiedMyxococcales (1) | | | | | | | | | | | +--Myxococcales bacterium 68-20 (1) | | | | | | | | | +--Sorangiineae (2) | | | | | | | | | | | +--Polyangiaceae (1) | | | | | | | | | | | | | +--Sorangium (1) | | | | | | | | | | | | | +--Sorangium cellulosum So0157-2 (1) | | | | | | | | | | | +--Labilitrichaceae (1) | | | | | | | | | | | +--Labilithrix luteola (1) | | | | | | | | | +--Cystobacterineae (6) | | | | | | | | | +--Anaeromyxobacteraceae (1) | | | | | | | | | | | +--Anaeromyxobacter sp. RBG_16_69_14 (1) | | | | | | | | | +--Archangiaceae (1) | | | | | | | | | | | +--Cystobacter (1) | | | | | | | | | | | +--Cystobacter fuscus DSM 2262 (1) | | | | | | | | | +--Vulgatibacteraceae (1) | | | | | | | | | | | +--Vulgatibacter incomptus (1) | | | | | | | | | +--Myxococcaceae (3) | | | | | | | | | +--Myxococcus (1) | | | | | | | | | | | +--Myxococcus stipitatus DSM 14675 (1) | | | | | | | | | +--Corallococcus (2) | | | | | | | | | +--Corallococcus sp. CAG:1435 (1) | | | | | | | | | +--Corallococcus coralloides DSM 2259 (1) | | | | | | | +--Desulfovibrionales (16) | | | | | | | | | +--Desulfomicrobiaceae (2) | | | | | | | | | | | +--Desulfoplanes formicivorans (1) | | | | | | | | | | | +--Desulfomicrobium (1) | | | | | | | | | | | +--Desulfomicrobium orale DSM 12838 (1) | | | | | | | | | +--Desulfohalobiaceae (1) | | | | | | | | | | | +--Desulfonauticus sp. 38_4375 (1) | | | | | | | | | +--Desulfovibrionaceae (13) | | | | | | | | | +--Pseudodesulfovibrio indicus (1) | | | | | | | | | +--Desulfovibrio sp. S3730MH75 (1) | | | | | | | | | +--Desulfovibrionaceae bacterium CG1_02_65_16 (1) | | | | | | | | | +--Desulfovibrio sp. DV (1) | | | | | | | | | +--Desulfovibrio (6) | | | | | | | | | | | +--Desulfovibrio alkalitolerans DSM 16529 (1) | | | | | | | | | | | +--Desulfovibrio bizertensis DSM 18034 (1) | | | | | | | | | | | +--Desulfovibrio gracilis DSM 16080 (1) | | | | | | | | | | | +--Desulfovibrio litoralis DSM 11393 (1) | | | | | | | | | | | +--Desulfovibrio piezophilus C1TLV30 (1) | | | | | | | | | | | +--Desulfovibrio gigas DSM 1382 = ATCC 19364 (1) | | | | | | | | | +--Desulfovibrio sp. TomC (1) | | | | | | | | | +--Desulfovibrio sp. K3S (1) | | | | | | | | | +--Desulfovibrio sp. An276 (1) | | | | | | | +--CandidatusDesulfofervidaceae (1) | | | | | | | | | +--Candidatus Desulfofervidus auxilii (1) | | | | | | | +--Desulfarculales (2) | | | | | | | | | +--Desulfarculaceae (2) | | | | | | | | | +--Desulfocarbo indianensis (1) | | | | | | | | | +--Dethiosulfatarculus sandiegensis (1) | | | | | | | +--Desulfobacterales (41) | | | | | | | | | +--Desulfobacterales bacterium S3730MH5 (1) | | | | | | | | | +--Desulfobacterales bacterium CG2_30_60_27 (1) | | | | | | | | | +--Desulfobacterales bacterium SG8_35_2 (1) | | | | | | | | | +--Desulfobacterales bacterium GWB2_56_26 (1) | | | | | | | | | +--Desulfobacterales bacterium C00003106 (1) | | | | | | | | | +--Desulfobacterales bacterium S5133MH4 (1) | | | | | | | | | +--Desulfobacteraceae (21) | | | | | | | | | | | +--Desulfotignum (1) | | | | | | | | | | | | | +--Desulfotignum phosphitoxidans DSM 13687 (1) | | | | | | | | | | | +--Candidatus Magnetomorum sp. HK-1 (1) | | | | | | | | | | | +--Desulfobacterium sp. 4572_20 (1) | | | | | | | | | | | +--Desulfococcus (1) | | | | | | | | | | | | | +--Desulfococcus multivorans DSM 2059 (1) | | | | | | | | | | | +--CandidatusMagnetoglobus (1) | | | | | | | | | | | | | +--Candidatus Magnetoglobus multicellularis str. Araruama (1) | | | | | | | | | | | +--Desulfobacteraceae bacterium IS3 (3) | | | | | | | | | | | +--Desulfobacteraceae bacterium 4572_35.2 (1) | | | | | | | | | | | +--Desulfobacteraceae bacterium 4572_130 (1) | | | | | | | | | | | +--Desulfobacteraceae bacterium 4572_88 (1) | | | | | | | | | | | +--Desulfobacterium (1) | | | | | | | | | | | | | +--Desulfobacterium vacuolatum DSM 3385 (1) | | | | | | | | | | | +--Desulfobacteraceae bacterium 4572_187 (1) | | | | | | | | | | | +--Desulfobacteraceae bacterium 4484_190.3 (1) | | | | | | | | | | | +--Desulfobacteraceae bacterium 4572_123 (2) | | | | | | | | | | | +--Desulfobacula sp. RIFOXYA12_FULL_46_16 (1) | | | | | | | | | | | +--Desulfobacteraceae bacterium 4572_89 (1) | | | | | | | | | | | +--Desulfobacula sp. RIFOXYB2_FULL_45_6 (1) | | | | | | | | | | | +--Desulfatitalea sp. BRH_c12 (1) | | | | | | | | | | | +--Desulfamplus magnetovallimortis (1) | | | | | | | | | +--Desulfobacterales bacterium PC51MH44 (1) | | | | | | | | | +--Desulfobacterales bacterium S5133MH16 (1) | | | | | | | | | +--Desulfobacterales bacterium SG8_35 (1) | | | | | | | | | +--Desulfobacterales bacterium RIFOXYA12_FULL_46_15 (1) | | | | | | | | | +--Desulfobulbaceae (8) | | | | | | | | | | | +--Desulfobulbaceae bacterium BRH_c16a (1) | | | | | | | | | | | +--Desulfofustis (2) | | | | | | | | | | | | | +--uncultured Desulfofustis sp. PB-SRB1 (1) | | | | | | | | | | | | | +--Desulfofustis glycolicus DSM 9705 (1) | | | | | | | | | | | +--Desulfobulbus sp. Tol-SR (1) | | | | | | | | | | | +--Desulfobulbaceae bacterium DB1 (1) | | | | | | | | | | | +--Desulfopila (1) | | | | | | | | | | | | | +--Desulfopila aestuarii DSM 18488 (1) | | | | | | | | | | | +--Desulfobulbaceae bacterium S3730MH12 (1) | | | | | | | | | | | +--Desulfocapsa (1) | | | | | | | | | | | +--Desulfocapsa sulfexigens DSM 10523 (1) | | | | | | | | | +--Desulfobacterales bacterium C00003104 (1) | | | | | | | | | +--Desulfobacterales bacterium S7086C20 (1) | | | | | | | +--Bdellovibrionales (4) | | | | | | | | | +--Bacteriovoracaceae (2) | | | | | | | | | | | +--Bacteriovorax sp. BAL6_X (1) | | | | | | | | | | | +--Bacteriovorax sp. Seq25_V (1) | | | | | | | | | +--Bdellovibrionaceae (2) | | | | | | | | | +--Bdellovibrio (2) | | | | | | | | | +--Bdellovibrio exovorus JSS (1) | | | | | | | | | +--Bdellovibrio bacteriovorus W (1) | | | | | | | +--Desulfurellales (2) | | | | | | | | | +--Desulfurellaceae (2) | | | | | | | | | +--Desulfurella (1) | | | | | | | | | | | +--Desulfurella acetivorans A63 (1) | | | | | | | | | +--Desulfurella amilsii (1) | | | | | | | +--unclassifiedDeltaproteobacteria (47) | | | | | | | +--Deltaproteobacteria bacterium RBG_16_71_12 (1) | | | | | | | +--Deltaproteobacteria bacterium GWB2_55_19 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8 (1) | | | | | | | +--Deltaproteobacteria bacterium GWC2_42_11 (1) | | | | | | | +--Deltaproteobacteria bacterium GWF2_42_12 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_16 (1) | | | | | | | +--Deltaproteobacteria bacterium RBG_13_61_14 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFCSPLOWO2_01_FULL_45_74 (1) | | | | | | | +--Deltaproteobacteria bacterium GWA2_45_12 (1) | | | | | | | +--Dissulfuribacter thermophilus (1) | | | | | | | +--delta proteobacterium ML8_D (1) | | | | | | | +--delta proteobacterium MLS_D (1) | | | | | | | +--Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_57_26 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFOXYD12_FULL_55_16 (1) | | | | | | | +--Deltaproteobacteria bacterium RBG_19FT_COMBO_56_10 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_40_36 (1) | | | | | | | +--Deltaproteobacteria bacterium SG8_13 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFOXYD12_FULL_57_12 (1) | | | | | | | +--Deltaproteobacteria bacterium CG2_30_43_15 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12 (1) | | | | | | | +--Deltaproteobacteria bacterium GWA2_55_10 (1) | | | | | | | +--Deltaproteobacteria bacterium 13_1_40CM_4_68_19 (1) | | | | | | | +--Deltaproteobacteria bacterium RBG_16_64_85 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFCSPLOWO2_02_44_9 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFOXYC2_FULL_48_10 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_43_16 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFOXYD12_FULL_56_24 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFOXYA12_FULL_61_11 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_50_16 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_43_9 (1) | | | | | | | +--delta proteobacterium ML8_F1 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFOXYD12_FULL_53_23 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_44_16 (1) | | | | | | | +--Deltaproteobacteria bacterium SM23_61 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFOXYA2_FULL_55_11 (1) | | | | | | | +--Deltaproteobacteria bacterium RBG_19FT_COMBO_58_16 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFOXYD2_FULL_66_9 (1) | | | | | | | +--Deltaproteobacteria bacterium RBG_16_44_11 (1) | | | | | | | +--Deltaproteobacteria bacterium 13_1_40CM_3_69_14 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFOXYD12_FULL_50_9 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_55_12 (1) | | | | | | | +--Deltaproteobacteria bacterium GWA2_65_63 (1) | | | | | | | +--Deltaproteobacteria bacterium CG2_30_63_29 (1) | | | | | | | +--Deltaproteobacteria bacterium GWD2_55_8 (1) | | | | | | | +--Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22 (1) | | | | | | | +--Deltaproteobacteria bacterium GWA2_54_12 (1) | | | | | | | +--Deltaproteobacteria bacterium CSP1-8 (1) | | | | | +--Candidatus Muproteobacteria bacterium RBG_16_65_34 (1) | | | | | +--Proteobacteria bacterium CAG:495 (1) | | | | | +--Zetaproteobacteria (2) | | | | | | | +--Mariprofundales (2) | | | | | | | +--Mariprofundaceae (2) | | | | | | | +--Mariprofundus ferrooxydans PV-1 (2) | | | | | +--Magnetococcus sp. MC-1 (4) | | | | | +--Gammaproteobacteria (807) | | | | | | | +--unclassifiedGammaproteobacteria (44) | | | | | | | | | +--Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_45_9 (1) | | | | | | | | | +--Competibacteraceae (2) | | | | | | | | | | | +--CandidatusCompetibacter (1) | | | | | | | | | | | | | +--Candidatus Competibacter denitrificans Run_A_D11 (1) | | | | | | | | | | | +--CandidatusContendobacter (1) | | | | | | | | | | | +--Candidatus Contendobacter odensis Run_B_J11 (1) | | | | | | | | | +--Solemya velesiana gill symbiont (1) | | | | | | | | | +--Gammaproteobacteria bacterium RIFOXYD12_FULL_61_37 (1) | | | | | | | | | +--Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_56_15 (1) | | | | | | | | | +--Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 (1) | | | | | | | | | +--Gammaproteobacteria bacterium RIFCSPHIGHO2_12_38_15 (1) | | | | | | | | | +--Gammaproteobacteria bacterium SG8_47 (1) | | | | | | | | | +--Gammaproteobacteria bacterium RBG_16_51_14 (1) | | | | | | | | | +--Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11 (1) | | | | | | | | | +--Gammaproteobacteria bacterium SG8_30 (1) | | | | | | | | | +--Gammaproteobacteria bacterium 39-13 (1) | | | | | | | | | +--Gammaproteobacteria bacterium SG8_31 (2) | | | | | | | | | +--Gammaproteobacteria bacterium GWE2_42_36 (1) | | | | | | | | | +--Candidatus Thioglobus autotrophicus (1) | | | | | | | | | +--SAR86 cluster bacterium SAR86A (1) | | | | | | | | | +--Gammaproteobacteria bacterium RBG_16_66_13 (1) | | | | | | | | | +--OMGgroup (1) | | | | | | | | | | | +--OM182 bacterium BACL3 MAG-120619-bin3 (1) | | | | | | | | | +--Solemya elarraichensis gill symbiont (1) | | | | | | | | | +--Gammaproteobacteria bacterium LUC14_002_19_P1 (1) | | | | | | | | | +--Gammaproteobacteria bacterium MFB021 (1) | | | | | | | | | +--Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_57_10 (1) | | | | | | | | | +--Gammaproteobacteria bacterium MedPE (1) | | | | | | | | | +--Gammaproteobacteria bacterium GWE2_37_16 (1) | | | | | | | | | +--Gammaproteobacteria bacterium BRH_c0 (1) | | | | | | | | | +--Sedimenticola thiotaurini (1) | | | | | | | | | +--endosymbiont of unidentified scaly snail isolate Monju (1) | | | | | | | | | +--Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22 (1) | | | | | | | | | +--Thiolapillus brandeum (1) | | | | | | | | | +--Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_52_10 (1) | | | | | | | | | +--Gammaproteobacteria bacterium RBG_16_57_12 (1) | | | | | | | | | +--SAR86 cluster bacterium SAR86E (1) | | | | | | | | | +--Wohlfahrtiimonas (1) | | | | | | | | | | | +--Wohlfahrtiimonas chitiniclastica SH04 (1) | | | | | | | | | +--sulfur-oxidizingsymbionts (3) | | | | | | | | | | | +--endosymbiont of Bathymodiolus septemdierum str. Myojin knoll (1) | | | | | | | | | | | +--Candidatus Thiodiazotropha endoloripes (1) | | | | | | | | | | | +--Candidatus Thiodiazotropha endolucinida (1) | | | | | | | | | +--Pseudohongiella spirulinae (1) | | | | | | | | | +--Gammaproteobacteria bacterium 13_2_20CM_66_19 (1) | | | | | | | | | +--Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_41_15 (1) | | | | | | | | | +--Gammaproteobacteria bacterium GWF2_41_13 (1) | | | | | | | | | +--CandidatusThioglobus (1) | | | | | | | | | | | +--Candidatus Thioglobus singularis PS1 (1) | | | | | | | | | +--Pseudohongiella acticola (1) | | | | | | | +--Solemya pervernicosa gill symbiont (1) | | | | | | | +--Reinekea blandensis MED297 (1) | | | | | | | +--Pasteurellales (33) | | | | | | | | | +--Haemophilus felis (1) | | | | | | | | | +--Pasteurellaceae (32) | | | | | | | | | +--Mannheimia succiniciproducens MBEL55E (1) | | | | | | | | | +--Pasteurella multocida subsp. multocida str. Pm70 (1) | | | | | | | | | +--Gallibacterium anatis UMN179 (1) | | | | | | | | | +--Haemophilus somnus 2336 (1) | | | | | | | | | +--Actinobacillus pleuropneumoniae serovar 5b str. L20 (1) | | | | | | | | | +--Haemophilus parasuis SH0165 (1) | | | | | | | | | +--Actinobacillus muris (1) | | | | | | | | | +--Avibacterium (1) | | | | | | | | | | | +--Avibacterium paragallinarum JF4211 (1) | | | | | | | | | +--Pasteurella (3) | | | | | | | | | | | +--Pasteurella bettyae CCUG 2042 (1) | | | | | | | | | | | +--Pasteurellamultocida (2) | | | | | | | | | | | +--Pasteurella multocida subsp. multocida str. Anand1_buffalo (1) | | | | | | | | | | | +--Pasteurella multocida subsp. multocida str. Anand1_cattle (1) | | | | | | | | | +--Aggregatibacter actinomycetemcomitans D11S-1 (1) | | | | | | | | | +--Haemophilus sp. HK 2154 (1) | | | | | | | | | +--Rodentibacter rarus (1) | | | | | | | | | +--Haemophilus ducreyi 35000HP (1) | | | | | | | | | +--Bibersteinia (1) | | | | | | | | | | | +--Bibersteinia trehalosi USDA-ARS-USMARC-192 (1) | | | | | | | | | +--Haemophilus influenzae Rd KW20 (1) | | | | | | | | | +--Haemophilus (1) | | | | | | | | | | | +--Haemophilus parahaemolyticus HK385 (1) | | | | | | | | | +--Haemophilus paracuniculus (1) | | | | | | | | | +--Haemophilus haemoglobinophilus (1) | | | | | | | | | +--Gallibacterium salpingitidis (1) | | | | | | | | | +--Rodentibacter heylii (1) | | | | | | | | | +--Chelonobacter oris (1) | | | | | | | | | +--Avibacterium paragallinarum (1) | | | | | | | | | +--Haemophilus pittmaniae HK 85 (1) | | | | | | | | | +--Rodentibacter myodis (1) | | | | | | | | | +--unclassifiedPasteurellaceae (2) | | | | | | | | | | | +--Pasteurellaceae bacterium NI1060 (1) | | | | | | | | | | | +--Pasteurellaceae bacterium 15-036681 (1) | | | | | | | | | +--Mannheimia (1) | | | | | | | | | | | +--Mannheimia haemolytica M42548 (1) | | | | | | | | | +--Actinobacillus succinogenes 130Z (1) | | | | | | | | | +--Actinobacillus minor NM305 (1) | | | | | | | | | +--Rodentibacter heidelbergensis (1) | | | | | | | +--Enterobacterales (47) | | | | | | | | | +--Yersiniaceae (6) | | | | | | | | | | | +--Serratia (2) | | | | | | | | | | | | | +--Serratiamarcescens (1) | | | | | | | | | | | | | | | +--Serratia marcescens subsp. marcescens Db11 (1) | | | | | | | | | | | | | +--Serratia marcescens FGI94 (1) | | | | | | | | | | | +--Serratia sp. Leaf50 (1) | | | | | | | | | | | +--Serratia sp. DD3 (1) | | | | | | | | | | | +--Rahnella (1) | | | | | | | | | | | | | +--Rahnella aquatilis CIP 78.65 = ATCC 33071 (1) | | | | | | | | | | | +--Chania (1) | | | | | | | | | | | +--Chania multitudinisentens RB-25 (1) | | | | | | | | | +--Pectobacteriaceae (2) | | | | | | | | | | | +--Sodalis praecaptivus (1) | | | | | | | | | | | +--Sodalis sp. TME1 (1) | | | | | | | | | +--Morganellaceae (8) | | | | | | | | | | | +--Moellerella (1) | | | | | | | | | | | | | +--Moellerella wisconsensis ATCC 35017 (1) | | | | | | | | | | | +--Xenorhabdus (3) | | | | | | | | | | | | | +--Xenorhabdus cabanillasii JM26 (1) | | | | | | | | | | | | | +--Xenorhabdus poinarii G6 (1) | | | | | | | | | | | | | +--Xenorhabdus szentirmaii DSM 16338 (1) | | | | | | | | | | | +--Morganella (1) | | | | | | | | | | | | | +--Morganellamorganii (1) | | | | | | | | | | | | | +--Morganella morganii subsp. morganii KT (1) | | | | | | | | | | | +--Providencia (3) | | | | | | | | | | | +--Providencia rettgeri Dmel1 (1) | | | | | | | | | | | +--Providencia sneebia DSM 19967 (1) | | | | | | | | | | | +--Providencia burhodogranariea DSM 19968 (1) | | | | | | | | | +--Enterobacteriaceae (21) | | | | | | | | | | | +--Cedecea (1) | | | | | | | | | | | | | +--Cedecea davisae DSM 4568 (1) | | | | | | | | | | | +--Salmonella (3) | | | | | | | | | | | | | +--Salmonellaenterica (3) | | | | | | | | | | | | | +--Salmonellaentericasubsp.enterica (3) | | | | | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 (1) | | | | | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Enteritidis str. LA5 (1) | | | | | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Newport str. S09097 (1) | | | | | | | | | | | +--Kluyvera (1) | | | | | | | | | | | | | +--Kluyvera ascorbata ATCC 33433 (1) | | | | | | | | | | | +--Izhakiella australiensis (1) | | | | | | | | | | | +--Yokenella (1) | | | | | | | | | | | | | +--Yokenella regensburgei ATCC 43003 (1) | | | | | | | | | | | +--Trabulsiella (1) | | | | | | | | | | | | | +--Trabulsiella guamensis ATCC 49490 (1) | | | | | | | | | | | +--Mangrovibacter sp. MFB070 (1) | | | | | | | | | | | +--Klebsiella sp. RIT-PI-d (1) | | | | | | | | | | | +--Escherichia (2) | | | | | | | | | | | | | +--Escherichia vulneris NBRC 102420 (1) | | | | | | | | | | | | | +--Escherichia coli ISC11 (1) | | | | | | | | | | | +--Enterobacter (1) | | | | | | | | | | | | | +--Enterobactercloacaecomplex (1) | | | | | | | | | | | | | +--Enterobacter cloacae S611 (1) | | | | | | | | | | | +--Klebsiella (5) | | | | | | | | | | | | | +--Klebsiella pneumoniae IS43 (1) | | | | | | | | | | | | | +--Klebsiella pneumoniae IS46 (1) | | | | | | | | | | | | | +--Klebsiella pneumoniae IS39 (1) | | | | | | | | | | | | | +--Klebsiella pneumoniae ISC21 (1) | | | | | | | | | | | | | +--Klebsiellapneumoniae (1) | | | | | | | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae DSM 30104 (1) | | | | | | | | | | | +--Buttiauxella (1) | | | | | | | | | | | | | +--Buttiauxella agrestis ATCC 33320 (1) | | | | | | | | | | | +--Atlantibacter (1) | | | | | | | | | | | | | +--Atlantibacter hermannii NBRC 105704 (1) | | | | | | | | | | | +--[Kluyvera] intestini (1) | | | | | | | | | +--Budviciaceae (1) | | | | | | | | | | | +--Leminorella (1) | | | | | | | | | | | +--Leminorella grimontii ATCC 33999 = DSM 5078 (1) | | | | | | | | | +--unclassifiedEnterobacterales (1) | | | | | | | | | | | +--Plesiomonas (1) | | | | | | | | | | | +--Plesiomonas shigelloides 302-73 (1) | | | | | | | | | +--Erwiniaceae (7) | | | | | | | | | | | +--Pantoea sp. PSNIH2 (1) | | | | | | | | | | | +--Pantoea latae (1) | | | | | | | | | | | +--Erwinia iniecta (1) | | | | | | | | | | | +--Erwinia sp. Leaf53 (1) | | | | | | | | | | | +--Pantoea sp. PSNIH1 (1) | | | | | | | | | | | +--Tatumella (1) | | | | | | | | | | | | | +--Tatumella ptyseos ATCC 33301 (1) | | | | | | | | | | | +--Erwinia gerundensis (1) | | | | | | | | | +--Hafniaceae (1) | | | | | | | | | +--Hafnia (1) | | | | | | | | | +--Hafnia alvei FB1 (1) | | | | | | | +--Aeromonadales (9) | | | | | | | | | +--Aeromonadaceae (7) | | | | | | | | | | | +--Tolumonas auensis DSM 9187 (1) | | | | | | | | | | | +--Oceanimonas sp. GK1 (1) | | | | | | | | | | | +--Aeromonas (2) | | | | | | | | | | | | | +--Aeromonas molluscorum 848 (1) | | | | | | | | | | | | | +--Aeromonas diversa CDC 2478-85 (1) | | | | | | | | | | | +--Aeromonas schubertii (1) | | | | | | | | | | | +--Aeromonas sp. RU39B (1) | | | | | | | | | | | +--Aeromonas hydrophila subsp. hydrophila ATCC 7966 (1) | | | | | | | | | +--Succinivibrionaceae (2) | | | | | | | | | +--Succinatimonas (1) | | | | | | | | | | | +--Succinatimonas sp. CAG:777 (1) | | | | | | | | | +--Succinatimonas hippei YIT 12066 (1) | | | | | | | +--Thiohalorhabdus denitrificans (1) | | | | | | | +--Orbales (6) | | | | | | | | | +--Orbaceae (6) | | | | | | | | | +--Gilliamella bombicola (1) | | | | | | | | | +--Frischella perrara (1) | | | | | | | | | +--Gilliamella (2) | | | | | | | | | | | +--Gilliamella apicola SCGC AB-598-I20 (1) | | | | | | | | | | | +--Gilliamella apicola SCGC AB-598-P17 (1) | | | | | | | | | +--Gilliamella sp. N-G2 (1) | | | | | | | | | +--Gilliamella apicola (1) | | | | | | | +--OMGgroup (7) | | | | | | | | | +--marine gamma proteobacterium HTCC2143 (1) | | | | | | | | | +--gamma proteobacterium HIMB55 (1) | | | | | | | | | +--gamma proteobacterium IMCC3088 (1) | | | | | | | | | +--marine gamma proteobacterium HTCC2080 (1) | | | | | | | | | +--OM60clade (1) | | | | | | | | | | | +--Congregibacter litoralis KT71 (1) | | | | | | | | | +--gamma proteobacterium HTCC2207 (1) | | | | | | | | | +--marine gamma proteobacterium HTCC2148 (1) | | | | | | | +--Cardiobacteriales (3) | | | | | | | | | +--Cardiobacteriaceae (3) | | | | | | | | | +--Dichelobacter nodosus VCS1703A (1) | | | | | | | | | +--Cardiobacterium (1) | | | | | | | | | | | +--Cardiobacterium valvarum F0432 (1) | | | | | | | | | +--Cardiobacterium hominis ATCC 15826 (1) | | | | | | | +--Gallaecimonas sp. 3-C-1 (1) | | | | | | | +--Methylococcales (16) | | | | | | | | | +--Crenotrichaceae (2) | | | | | | | | | | | +--Crenothrix sp. D3 (1) | | | | | | | | | | | +--Crenothrix polyspora (1) | | | | | | | | | +--Methylothermaceae (1) | | | | | | | | | | | +--Methylothermaceae bacteria B42 (1) | | | | | | | | | +--Methylococcaceae (12) | | | | | | | | | | | +--Methylomicrobium (1) | | | | | | | | | | | | | +--Methylomicrobium alcaliphilum 20Z (1) | | | | | | | | | | | +--Methylomagnum ishizawai (1) | | | | | | | | | | | +--Methylobacter tundripaludum SV96 (1) | | | | | | | | | | | +--Methylomonas sp. DH-1 (1) | | | | | | | | | | | +--Methyloprofundus sedimenti (1) | | | | | | | | | | | +--Methylococcus capsulatus str. Bath (1) | | | | | | | | | | | +--Methylomonas methanica MC09 (1) | | | | | | | | | | | +--Methylomonas sp. LWB (1) | | | | | | | | | | | +--Methylococcaceae bacterium Sn10-6 (1) | | | | | | | | | | | +--Methylomicrobium album BG8 (1) | | | | | | | | | | | +--Methylomonas denitrificans (1) | | | | | | | | | | | +--Methylomonas lenta (1) | | | | | | | | | +--Methylococcaceae bacterium KoM1 (1) | | | | | | | +--Legionellales (48) | | | | | | | | | +--Legionella-like amoebal pathogen HT99 (1) | | | | | | | | | +--Legionellaceae (41) | | | | | | | | | | | +--Legionella londiniensis (1) | | | | | | | | | | | +--Legionella jordanis (2) | | | | | | | | | | | +--Legionella nautarum (2) | | | | | | | | | | | +--Legionella brunensis (3) | | | | | | | | | | | +--Legionella spiritensis (2) | | | | | | | | | | | +--Legionella lansingensis (1) | | | | | | | | | | | +--Legionella israelensis (1) | | | | | | | | | | | +--Legionella clemsonensis (2) | | | | | | | | | | | +--Legionella jamestowniensis (1) | | | | | | | | | | | +--Legionella tucsonensis (2) | | | | | | | | | | | +--Legionella longbeachae NSW150 (1) | | | | | | | | | | | +--Legionella norrlandica (2) | | | | | | | | | | | +--Legionella waltersii (2) | | | | | | | | | | | +--Legionella pneumophila subsp. pneumophila str. Philadelphia 1 (1) | | | | | | | | | | | +--Legionella quinlivanii (2) | | | | | | | | | | | +--Legionella feeleii (3) | | | | | | | | | | | +--Legionella drancourtii LLAP12 (1) | | | | | | | | | | | +--Legionella sp. LegA (1) | | | | | | | | | | | +--Legionella sp. 40-6 (1) | | | | | | | | | | | +--Legionella (5) | | | | | | | | | | | | | +--Legionella shakespearei DSM 23087 (2) | | | | | | | | | | | | | +--Legionella fallonii LLAP-10 (2) | | | | | | | | | | | | | +--Legionella oakridgensis ATCC 33761 = DSM 21215 (1) | | | | | | | | | | | +--Legionella rubrilucens (1) | | | | | | | | | | | +--Legionella geestiana (1) | | | | | | | | | | | +--Tatlockia micdadei (2) | | | | | | | | | | | +--Legionella adelaidensis (1) | | | | | | | | | +--Coxiellaceae (5) | | | | | | | | | | | +--Rickettsiella grylli (2) | | | | | | | | | | | +--Coxiella sp. RIFCSPHIGHO2_12_FULL_44_14 (1) | | | | | | | | | | | +--Coxiella sp. RIFCSPHIGHO2_12_FULL_42_15 (1) | | | | | | | | | | | +--Coxiella burnetii RSA 493 (1) | | | | | | | | | +--Legionella-like amoebal pathogen CC99 (1) | | | | | | | +--Alteromonadales (96) | | | | | | | | | +--Moritellaceae (1) | | | | | | | | | | | +--Moritella viscosa (1) | | | | | | | | | +--Alteromonadalesgeneraincertaesedis (1) | | | | | | | | | | | +--Teredinibacter turnerae T7901 (1) | | | | | | | | | +--Colwelliaceae (9) | | | | | | | | | | | +--Thalassomonas actiniarum (1) | | | | | | | | | | | +--Thalassotalea sp. ND16A (1) | | | | | | | | | | | +--Thalassotalea sp. PP2-459 (1) | | | | | | | | | | | +--Colwellia sp. 39_35_sub15_T18 (1) | | | | | | | | | | | +--Colwellia psychrerythraea 34H (1) | | | | | | | | | | | +--Colwellia sp. PAMC 21821 (1) | | | | | | | | | | | +--Colwellia sp. Phe_37 (1) | | | | | | | | | | | +--Colwellia sp. PAMC 20917 (1) | | | | | | | | | | | +--Colwellia sp. MT41 (1) | | | | | | | | | +--gamma proteobacterium IMCC1989 (1) | | | | | | | | | +--Ferrimonadaceae (2) | | | | | | | | | | | +--Ferrimonas balearica DSM 9799 (1) | | | | | | | | | | | +--Ferrimonas marina (1) | | | | | | | | | +--Pseudoalteromonadaceae (19) | | | | | | | | | | | +--Pseudoalteromonas sp. OCN003 (1) | | | | | | | | | | | +--Pseudoalteromonas ulvae (1) | | | | | | | | | | | +--Pseudoalteromonas amylolytica (1) | | | | | | | | | | | +--Pseudoalteromonas atlantica T6c (1) | | | | | | | | | | | +--Pseudoalteromonas sp. A601 (1) | | | | | | | | | | | +--Pseudoalteromonas porphyrae (1) | | | | | | | | | | | +--Pseudoalteromonas rubra (1) | | | | | | | | | | | +--Pseudoalteromonas haloplanktis TAC125 (1) | | | | | | | | | | | +--Pseudoalteromonas fuliginea (1) | | | | | | | | | | | +--Pseudoalteromonas ruthenica (1) | | | | | | | | | | | +--Pseudoalteromonas tunicata D2 (1) | | | | | | | | | | | +--Pseudoalteromonas piscicida (1) | | | | | | | | | | | +--Pseudoalteromonas (5) | | | | | | | | | | | | | +--Pseudoalteromonas luteoviolacea B = ATCC 29581 (1) | | | | | | | | | | | | | +--Pseudoalteromonas marina DSM 17587 (1) | | | | | | | | | | | | | +--Pseudoalteromonas luteoviolacea S4054 (1) | | | | | | | | | | | | | +--Pseudoalteromonas lipolytica SCSIO 04301 (1) | | | | | | | | | | | | | +--Pseudoalteromonas citrea DSM 8771 (1) | | | | | | | | | | | +--Pseudoalteromonas phenolica (1) | | | | | | | | | | | +--Pseudoalteromonas sp. P1-25 (1) | | | | | | | | | +--Shewanellaceae (13) | | | | | | | | | | | +--Shewanella oneidensis MR-1 (1) | | | | | | | | | | | +--Shewanella sp. P1-14-1 (1) | | | | | | | | | | | +--Shewanella loihica PV-4 (1) | | | | | | | | | | | +--Shewanella violacea DSS12 (1) | | | | | | | | | | | +--Shewanella algae (1) | | | | | | | | | | | +--Shewanella amazonensis SB2B (1) | | | | | | | | | | | +--Shewanella frigidimarina NCIMB 400 (1) | | | | | | | | | | | +--Shewanella woodyi ATCC 51908 (1) | | | | | | | | | | | +--Shewanella putrefaciens CN-32 (1) | | | | | | | | | | | +--Shewanella pealeana ATCC 700345 (1) | | | | | | | | | | | +--Shewanella denitrificans OS217 (1) | | | | | | | | | | | +--Shewanella mangrovi (1) | | | | | | | | | | | +--Shewanella benthica KT99 (1) | | | | | | | | | +--Psychromonadaceae (2) | | | | | | | | | | | +--Psychromonas ingrahamii 37 (1) | | | | | | | | | | | +--Psychromonas sp. CNPT3 (1) | | | | | | | | | +--Idiomarinaceae (9) | | | | | | | | | | | +--Idiomarina woesei (1) | | | | | | | | | | | +--Idiomarina loihiensis L2TR (1) | | | | | | | | | | | +--Idiomarina planktonica (1) | | | | | | | | | | | +--Idiomarina sp. 10-D-4 (1) | | | | | | | | | | | +--Pseudidiomarina salinarum (1) | | | | | | | | | | | +--Idiomarina atlantica (1) | | | | | | | | | | | +--Idiomarina baltica OS145 (1) | | | | | | | | | | | +--Idiomarina sp. A28L (1) | | | | | | | | | | | +--Idiomarinaceae bacterium HL-53 (1) | | | | | | | | | +--Alteromonadaceae (39) | | | | | | | | | +--Marinobacter (2) | | | | | | | | | | | +--Marinobacter santoriniensis NKSG1 (1) | | | | | | | | | | | +--Marinobacter excellens HL-55 (1) | | | | | | | | | +--Glaciecola sp. BSs20135 (1) | | | | | | | | | +--Marinobacter algicola DG893 (1) | | | | | | | | | +--Paraglaciecola (1) | | | | | | | | | | | +--Paraglaciecola psychrophila 170 (1) | | | | | | | | | +--Alteromonas sp. H17 (1) | | | | | | | | | +--Marinobacterium stanieri (1) | | | | | | | | | +--Marinobacter sp. AC-23 (1) | | | | | | | | | +--Aliiglaciecola (1) | | | | | | | | | | | +--Aliiglaciecola lipolytica E3 (1) | | | | | | | | | +--Aestuariibacter aggregatus (1) | | | | | | | | | +--Saccharophagus degradans 2-40 (1) | | | | | | | | | +--Catenovulum (1) | | | | | | | | | | | +--Catenovulum agarivorans DS-2 (1) | | | | | | | | | +--Marinobacter similis (1) | | | | | | | | | +--Marinobacter sp. D15-8W (1) | | | | | | | | | +--Microbulbifer thermotolerans (1) | | | | | | | | | +--Alteromonas (1) | | | | | | | | | | | +--Alteromonas macleodii str. 'Black Sea 11' (1) | | | | | | | | | +--Marinobacter sp. BSs20148 (1) | | | | | | | | | +--Alteromonadaceae bacterium Bs31 (1) | | | | | | | | | +--Agarivorans (1) | | | | | | | | | | | +--Agarivorans albus MKT 106 (1) | | | | | | | | | +--Marinobacter sp. HL-58 (1) | | | | | | | | | +--Marinobacter sp. X15-166B (1) | | | | | | | | | +--Marinobacter sp. ZS2-30 (1) | | | | | | | | | +--Microbulbifer donghaiensis (1) | | | | | | | | | +--Alishewanella (1) | | | | | | | | | | | +--Alishewanella agri BL06 (1) | | | | | | | | | +--Glaciecola (2) | | | | | | | | | | | +--Glaciecola punicea ACAM 611 (1) | | | | | | | | | | | +--Glaciecola pallidula DSM 14239 = ACAM 615 (1) | | | | | | | | | +--Alteromonas confluentis (1) | | | | | | | | | +--Marinobacter subterrani (1) | | | | | | | | | +--Marinobacter salinus (1) | | | | | | | | | +--Catenovulum maritimum (1) | | | | | | | | | +--Microbulbifer agarilyticus (1) | | | | | | | | | +--Marinobacter sp. T13-3 (1) | | | | | | | | | +--Alteromonas sp. RW2A1 (1) | | | | | | | | | +--Paraglaciecola sp. S66 (1) | | | | | | | | | +--Lacimicrobium alkaliphilum (1) | | | | | | | | | +--Alteromonas sp. SN2 (1) | | | | | | | | | +--Alteromonas lipolytica (1) | | | | | | | | | +--Glaciecola nitratireducens FR1064 (1) | | | | | | | | | +--Marinobacter lutaoensis (1) | | | | | | | +--Bathymodiolus thermophilus thioautotrophic gill symbiont (1) | | | | | | | +--endosymbiont of Tevnia jerichonana (vent Tica) (1) | | | | | | | +--Xanthomonadales (72) | | | | | | | | | +--Xanthomonadales bacterium 63-13 (1) | | | | | | | | | +--Rhodanobacteraceae (22) | | | | | | | | | | | +--Rhodanobacter sp. 115 (1) | | | | | | | | | | | +--Rhodanobacter sp. Soil772 (1) | | | | | | | | | | | +--Luteibacter sp. UNCMF366Tsu5.1 (1) | | | | | | | | | | | +--Rhodanobacter sp. C06 (1) | | | | | | | | | | | +--Frateuria sp. Soil773 (1) | | | | | | | | | | | +--Oleiagrimonas soli (1) | | | | | | | | | | | +--Dyella jiangningensis (1) | | | | | | | | | | | +--Rhodanobacter sp. C03 (1) | | | | | | | | | | | +--Rhodanobacter sp. SCN 67-45 (1) | | | | | | | | | | | +--Frateuria (1) | | | | | | | | | | | | | +--Frateuria aurantia DSM 6220 (1) | | | | | | | | | | | +--Rhodanobacter sp. SCN 69-32 (1) | | | | | | | | | | | +--Rhodanobacter sp. FW510-R10 (1) | | | | | | | | | | | +--Luteibacter sp. 22Crub2.1 (1) | | | | | | | | | | | +--Rhodanobacter sp. OK091 (1) | | | | | | | | | | | +--Luteibacter (1) | | | | | | | | | | | | | +--Luteibacter rhizovicinus DSM 16549 (1) | | | | | | | | | | | +--Rhodanobacter sp. SCN 68-63 (1) | | | | | | | | | | | +--Rhodanobacter sp. B05 (1) | | | | | | | | | | | +--Rhodanobacter (2) | | | | | | | | | | | | | +--Rhodanobacter fulvus Jip2 (1) | | | | | | | | | | | | | +--Rhodanobacter spathiphylli B39 (1) | | | | | | | | | | | +--Dokdonella (1) | | | | | | | | | | | | | +--Dokdonella koreensis DS-123 (1) | | | | | | | | | | | +--Rhodanobacter sp. RIFOXYA1_FULL_67_6 (1) | | | | | | | | | | | +--Rhodanobacter sp. B04 (1) | | | | | | | | | +--Sinobacteraceae (2) | | | | | | | | | | | +--Steroidobacter denitrificans (1) | | | | | | | | | | | +--Hydrocarboniphaga daqingensis (1) | | | | | | | | | +--Xanthomonadales bacterium RIFOXYA1_FULL_69_10 (1) | | | | | | | | | +--Xanthomonadaceae (46) | | | | | | | | | +--Dyella sp. ATSB10 (1) | | | | | | | | | +--Xanthomonas translucens pv. undulosa (1) | | | | | | | | | +--Xanthomonas sp. Mitacek01 (1) | | | | | | | | | +--Pseudoxanthomonas sp. Root65 (1) | | | | | | | | | +--Pseudoxanthomonas suwonensis 11-1 (1) | | | | | | | | | +--Lysobacter enzymogenes (1) | | | | | | | | | +--Luteimonas sp. JM171 (1) | | | | | | | | | +--Stenotrophomonas chelatiphaga (1) | | | | | | | | | +--Xylella taiwanensis (1) | | | | | | | | | +--Lysobacter sp. Root494 (1) | | | | | | | | | +--Lysobacter sp. Root96 (1) | | | | | | | | | +--Xanthomonas (1) | | | | | | | | | | | +--Xanthomonas albilineans GPE PC73 (1) | | | | | | | | | +--Stenotrophomonas sp. LM091 (1) | | | | | | | | | +--Stenotrophomonas terrae (1) | | | | | | | | | +--Xylella fastidiosa 9a5c (1) | | | | | | | | | +--Pseudoxanthomonas dokdonensis (1) | | | | | | | | | +--Stenotrophomonas daejeonensis (1) | | | | | | | | | +--Xanthomonas oryzae pv. oryzae KACC10331 (1) | | | | | | | | | +--Stenotrophomonas sp. Leaf70 (1) | | | | | | | | | +--Luteibacter yeojuensis (1) | | | | | | | | | +--Pseudoxanthomonas spadix BD-a59 (1) | | | | | | | | | +--Stenotrophomonas sp. BIIR7 (1) | | | | | | | | | +--Pseudoxanthomonas suwonensis (1) | | | | | | | | | +--Stenotrophomonas panacihumi (1) | | | | | | | | | +--Stenotrophomonas (2) | | | | | | | | | | | +--Stenotrophomonas maltophilia (1) | | | | | | | | | | | +--Stenotrophomonasmaltophiliagroup (1) | | | | | | | | | | | +--Stenotrophomonas maltophilia SKK35 (1) | | | | | | | | | +--Lysobacter sp. ZS79 (1) | | | | | | | | | +--Xanthomonas campestris pv. campestris str. ATCC 33913 (1) | | | | | | | | | +--Pseudoxanthomonas sp. P15 (1) | | | | | | | | | +--Arenimonas (5) | | | | | | | | | | | +--Arenimonas donghaensis DSM 18148 = HO3-R19 (1) | | | | | | | | | | | +--Arenimonas oryziterrae DSM 21050 = YC6267 (1) | | | | | | | | | | | +--Arenimonas composti TR7-09 = DSM 18010 (1) | | | | | | | | | | | +--Arenimonas malthae CC-JY-1 (1) | | | | | | | | | | | +--Arenimonas metalli CF5-1 (1) | | | | | | | | | +--Lysobacter sp. A03 (1) | | | | | | | | | +--Xanthomonas fragariae (1) | | | | | | | | | +--Luteimonas sp. FCS-9 (1) | | | | | | | | | +--Stenotrophomonas koreensis (1) | | | | | | | | | +--Lysobacter gummosus (1) | | | | | | | | | +--Lysobacter antibioticus (1) | | | | | | | | | +--unclassifiedXanthomonadaceae (1) | | | | | | | | | | | +--Xanthomonadaceae bacterium SCN 69-320 (1) | | | | | | | | | +--Lysobacter (5) | | | | | | | | | +--Lysobacter daejeonensis GH1-9 (1) | | | | | | | | | +--Lysobacter capsici AZ78 (1) | | | | | | | | | +--Lysobacter concretionis Ko07 = DSM 16239 (1) | | | | | | | | | +--Lysobacter dokdonensis DS-58 (1) | | | | | | | | | +--Lysobacter spongiicola DSM 21749 (1) | | | | | | | +--Enterobacteriales (66) | | | | | | | | | +--primary endosymbiont of Sitophilus oryzae (1) | | | | | | | | | +--Enterobacteriaceae (65) | | | | | | | | | +--Serratia fonticola (1) | | | | | | | | | +--Pantoea gaviniae (1) | | | | | | | | | +--Leclercia adecarboxylata (1) | | | | | | | | | +--Dickeya dadantii 3937 (1) | | | | | | | | | +--Pantoea stewartii subsp. stewartii DC283 (1) | | | | | | | | | +--Sodalis glossinidius str. 'morsitans' (1) | | | | | | | | | +--Kluyvera intermedia (1) | | | | | | | | | +--Xenorhabdus vietnamensis (1) | | | | | | | | | +--Brenneria sp. EniD312 (1) | | | | | | | | | +--Enterobacter aerogenes KCTC 2190 (1) | | | | | | | | | +--Serratia sp. ATCC 39006 (1) | | | | | | | | | +--Proteus penneri ATCC 35198 (1) | | | | | | | | | +--Salmonella (1) | | | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1) | | | | | | | | | +--Escherichia coli (1) | | | | | | | | | +--Pantoea ananatis LMG 20103 (1) | | | | | | | | | +--Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- (1) | | | | | | | | | +--Pectobacterium atrosepticum SCRI1043 (1) | | | | | | | | | +--Xenorhabdus innexi (1) | | | | | | | | | +--Raoultella ornithinolytica (1) | | | | | | | | | +--Escherichia coli K-12 (1) | | | | | | | | | +--Xenorhabdus nematophila ATCC 19061 (1) | | | | | | | | | +--Xenorhabdus doucetiae (1) | | | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (1) | | | | | | | | | +--Xenorhabdus sp. SF87 (1) | | | | | | | | | +--Shigella dysenteriae Sd197 (1) | | | | | | | | | +--Yersinia sp. M24tronco3 (1) | | | | | | | | | +--Yersinia ruckeri (1) | | | | | | | | | +--Serratia odorifera DSM 4582 (1) | | | | | | | | | +--aphidsecondarysymbionts (3) | | | | | | | | | | | +--Candidatus Regiella insecticola R5.15 (1) | | | | | | | | | | | +--Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) (1) | | | | | | | | | | | +--Candidatus Regiella insecticola LSR1 (1) | | | | | | | | | +--Erwinia tasmaniensis (1) | | | | | | | | | +--Serratia proteamaculans 568 (1) | | | | | | | | | +--Tatumella morbirosei (1) | | | | | | | | | +--Enterobacter sp. 638 (1) | | | | | | | | | +--Enterobacter gergoviae (1) | | | | | | | | | +--Edwardsiella ictaluri 93-146 (1) | | | | | | | | | +--Raoultella planticola (1) | | | | | | | | | +--Pantoea dispersa (1) | | | | | | | | | +--Photorhabdus luminescens subsp. laumondii TTO1 (1) | | | | | | | | | +--Enterobacter (1) | | | | | | | | | | | +--Enterobacter cloacae SCF1 (1) | | | | | | | | | +--Citrobacter koseri ATCC BAA-895 (1) | | | | | | | | | +--Pantoea sp. At-9b (1) | | | | | | | | | +--Yersinia pestis CO92 (1) | | | | | | | | | +--Erwinia billingiae (1) | | | | | | | | | +--Yersinia mollaretii ATCC 43969 (1) | | | | | | | | | +--Pragia fontium (1) | | | | | | | | | +--Brenneria goodwinii (1) | | | | | | | | | +--Cronobacter sakazakii ATCC BAA-894 (1) | | | | | | | | | +--Erwinia mallotivora (1) | | | | | | | | | +--Serratia (1) | | | | | | | | | | | +--Serratia symbiotica str. Tucson (1) | | | | | | | | | +--Providencia rettgeri (1) | | | | | | | | | +--Citrobacter rodentium ICC168 (1) | | | | | | | | | +--Erwinia tracheiphila (1) | | | | | | | | | +--Enterobacter pulveris (1) | | | | | | | | | +--Pantoea vagans C9-1 (1) | | | | | | | | | +--Escherichia blattae DSM 4481 (1) | | | | | | | | | +--Proteus mirabilis (1) | | | | | | | | | +--Serratia symbiotica (1) | | | | | | | | | +--Providencia rettgeri DSM 1131 (1) | | | | | | | | | +--Pantoea wallisii (1) | | | | | | | | | +--Xenorhabdus bovienii SS-2004 (1) | | | | | | | | | +--Yersinia pseudotuberculosis IP 32953 (1) | | | | | | | | | +--Xenorhabdus beddingii (1) | | | | | | | | | +--Lonsdalea quercina (1) | | | | | | | +--Oceanospirillales (79) | | | | | | | | | +--Marinomonas aquimarina (1) | | | | | | | | | +--Oceanospirillum linum (1) | | | | | | | | | +--Oceanospirillaceae (19) | | | | | | | | | | | +--Bacterioplanes sanyensis (1) | | | | | | | | | | | +--Marinospirillum (1) | | | | | | | | | | | | | +--Marinospirillum alkaliphilum DSM 21637 (1) | | | | | | | | | | | +--Osedax symbiont Rs1 (1) | | | | | | | | | | | +--Oleispira (1) | | | | | | | | | | | | | +--Oleispira antarctica RB-8 (1) | | | | | | | | | | | +--Nitrincola nitratireducens (1) | | | | | | | | | | | +--Nitrincola sp. A-D6 (1) | | | | | | | | | | | +--Thalassolituus (1) | | | | | | | | | | | | | +--Thalassolituus oleivorans MIL-1 (1) | | | | | | | | | | | +--Oceanobacter sp. HI0075 (2) | | | | | | | | | | | +--Neptuniibacter sp. Phe_28 (2) | | | | | | | | | | | +--Motiliproteus sp. MSK22-1 (1) | | | | | | | | | | | +--Osedax symbiont Rs2 (1) | | | | | | | | | | | +--Marinomonas spartinae (1) | | | | | | | | | | | +--Thalassolituus sp. HI0120 (2) | | | | | | | | | | | +--Marinobacterium sp. AK27 (1) | | | | | | | | | | | +--Marinomonas (1) | | | | | | | | | | | | | +--Marinomonas ushuaiensis DSM 15871 (1) | | | | | | | | | | | +--Marinobacterium sp. ST58-10 (1) | | | | | | | | | +--Marinomonas sp. MWYL1 (1) | | | | | | | | | +--Endozoicomonaceae (2) | | | | | | | | | | | +--Parendozoicomonas haliclonae (1) | | | | | | | | | | | +--Endozoicomonas sp. (ex Bugula neritina AB1) (1) | | | | | | | | | +--Neptunomonas sp. S3-22 (1) | | | | | | | | | +--unclassifiedOceanospirillales (2) | | | | | | | | | | | +--Oceanospirillales bacterium LUC14_002_19_P2 (1) | | | | | | | | | | | +--SUP05cluster (1) | | | | | | | | | | | +--uncultured SUP05 cluster bacterium (1) | | | | | | | | | +--Oceanospirillum multiglobuliferum (1) | | | | | | | | | +--Neptuniibacter caesariensis (1) | | | | | | | | | +--Bermanella marisrubri (1) | | | | | | | | | +--Marinomonas posidonica IVIA-Po-181 (1) | | | | | | | | | +--Hahellaceae (4) | | | | | | | | | | | +--Endozoicomonas numazuensis (1) | | | | | | | | | | | +--Hahella chejuensis KCTC 2396 (1) | | | | | | | | | | | +--Endozoicomonas elysicola (1) | | | | | | | | | | | +--Endozoicomonas montiporae (1) | | | | | | | | | +--Oleiphilaceae (4) | | | | | | | | | | | +--Oleiphilus sp. HI0065 (2) | | | | | | | | | | | +--Oleiphilus sp. HI0009 (1) | | | | | | | | | | | +--Oleiphilus sp. HI0069 (1) | | | | | | | | | +--Saccharospirillaceae (1) | | | | | | | | | | | +--Gynuella (1) | | | | | | | | | | | +--Gynuella sunshinyii YC6258 (1) | | | | | | | | | +--Halomonadaceae (29) | | | | | | | | | | | +--Halotalea alkalilenta (1) | | | | | | | | | | | +--Chromohalobacter salexigens DSM 3043 (1) | | | | | | | | | | | +--Halomonas huangheensis (1) | | | | | | | | | | | +--Halomonas (3) | | | | | | | | | | | | | +--Halomonas ilicicola DSM 19980 (1) | | | | | | | | | | | | | +--Halomonas desiderata SP1 (1) | | | | | | | | | | | | | +--Halomonas anticariensis FP35 = DSM 16096 (1) | | | | | | | | | | | +--Cobetia sp. UCD-24C (1) | | | | | | | | | | | +--Halomonas elongata (1) | | | | | | | | | | | +--Kushneria sp. YCWA18 (1) | | | | | | | | | | | +--Kushneria marisflavi (1) | | | | | | | | | | | +--Halomonas sp. SUBG004 (1) | | | | | | | | | | | +--Halomonas sp. JB380 (1) | | | | | | | | | | | +--Halomonas subglaciescola (1) | | | | | | | | | | | +--Halomonas campaniensis (1) | | | | | | | | | | | +--Halomonas elongata DSM 2581 (1) | | | | | | | | | | | +--Halomonas sp. S2151 (1) | | | | | | | | | | | +--Halomonas aestuarii (1) | | | | | | | | | | | +--Halomonas sp. 1513 (1) | | | | | | | | | | | +--Halomonas sp. 'Soap Lake #7' (1) | | | | | | | | | | | +--Halomonas sp. 54_146 (1) | | | | | | | | | | | +--Halomonas sp. QHL1 (1) | | | | | | | | | | | +--Halomonas sp. PBN3 (1) | | | | | | | | | | | +--Halomonas meridiana (1) | | | | | | | | | | | +--Halomonas sp. BC04 (1) | | | | | | | | | | | +--Salinicola sp. MIT1003 (1) | | | | | | | | | | | +--Halomonadaceae bacterium T82-2 (1) | | | | | | | | | | | +--Halomonas chromatireducens (1) | | | | | | | | | | | +--Halomonas salina (1) | | | | | | | | | | | +--Halomonas sp. HL-48 (1) | | | | | | | | | +--Alcanivoracaceae (6) | | | | | | | | | | | +--Alcanivorax sp. W11-5 (1) | | | | | | | | | | | +--Alcanivorax sp. Nap_24 (1) | | | | | | | | | | | +--Kangiella sp. YCS-5 (1) | | | | | | | | | | | +--Alcanivorax (1) | | | | | | | | | | | | | +--Alcanivorax dieselolei B5 (1) | | | | | | | | | | | +--Alcanivorax borkumensis SK2 (1) | | | | | | | | | | | +--Kangiella koreensis DSM 16069 (1) | | | | | | | | | +--Marinomonas mediterranea MMB-1 (1) | | | | | | | | | +--Marinomonas sp. S3726 (1) | | | | | | | | | +--Halomonadaceae bacterium PH27A (1) | | | | | | | | | +--Nitrincola lacisaponensis (1) | | | | | | | +--Pseudomonadales (129) | | | | | | | | | +--unclassifiedPseudomonadales (4) | | | | | | | | | | | +--Pseudomonadales bacterium RIFCSPHIGHO2_02_FULL_60_43 (1) | | | | | | | | | | | +--Pseudomonadales bacterium RIFCSPLOWO2_12_59_9 (1) | | | | | | | | | | | +--Pseudomonadales bacterium GWC1_66_9 (1) | | | | | | | | | | | +--Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210 (1) | | | | | | | | | +--Pseudomonadaceae (74) | | | | | | | | | | | +--Pseudomonas sp. Chol1 (1) | | | | | | | | | | | +--Pseudomonas sp. HUK17 (1) | | | | | | | | | | | +--Pseudomonas lutea (1) | | | | | | | | | | | +--Pseudomonas sp. M30-35 (1) | | | | | | | | | | | +--Pseudomonas sp. G5(2012) (1) | | | | | | | | | | | +--Pseudomonas alkylphenolia (1) | | | | | | | | | | | +--Pseudomonas aeruginosa PAO1 (1) | | | | | | | | | | | +--Pseudomonas sp. 1 R 17 (1) | | | | | | | | | | | +--Pseudomonas sp. URMO17WK12:I11 (1) | | | | | | | | | | | +--Pseudomonas sp. StFLB209 (1) | | | | | | | | | | | +--Serpens flexibilis (1) | | | | | | | | | | | +--Pseudomonas sp. UW4 (1) | | | | | | | | | | | +--Azotobacter vinelandii DJ (1) | | | | | | | | | | | +--Pseudomonas sp. ABAC61 (1) | | | | | | | | | | | +--Pseudomonas saudiphocaensis (1) | | | | | | | | | | | +--Pseudomonas sp. VI4.1 (1) | | | | | | | | | | | +--Pseudomonas mendocina ymp (1) | | | | | | | | | | | +--Pseudomonas entomophila L48 (1) | | | | | | | | | | | +--Pseudomonas fluorescens SBW25 (1) | | | | | | | | | | | +--Pseudomonas stutzeri A1501 (1) | | | | | | | | | | | +--Pseudomonas putida CSV86 (1) | | | | | | | | | | | +--Pseudomonas sp. FeS53a (1) | | | | | | | | | | | +--Pseudomonas putida (1) | | | | | | | | | | | +--Pseudomonas syringae pv. tomato str. DC3000 (1) | | | | | | | | | | | +--Pseudomonas sp. M47T1 (1) | | | | | | | | | | | +--Pseudomonas floridensis (1) | | | | | | | | | | | +--Pseudomonas (17) | | | | | | | | | | | | | +--Pseudomonassyringaegroup (2) | | | | | | | | | | | | | | | +--Pseudomonas cichorii JBC1 (1) | | | | | | | | | | | | | | | +--Pseudomonassyringaegroupgenomosp.1 (1) | | | | | | | | | | | | | | | +--Pseudomonassyringae (1) | | | | | | | | | | | | | | | +--Pseudomonassyringaegrouppathovarsincertaesedis (1) | | | | | | | | | | | | | | | +--Pseudomonas syringae pv. actinidiae ICMP 19096 (1) | | | | | | | | | | | | | +--Pseudomonasstutzerigroup (1) | | | | | | | | | | | | | | | +--Pseudomonas balearica DSM 6083 (1) | | | | | | | | | | | | | +--Pseudomonasfluorescensgroup (2) | | | | | | | | | | | | | | | +--Pseudomonas fluorescens F113 (1) | | | | | | | | | | | | | | | +--Pseudomonas fluorescens ABAC62 (1) | | | | | | | | | | | | | +--Pseudomonas syringae pv. japonica str. M301072PT (1) | | | | | | | | | | | | | +--Pseudomonasaeruginosagroup (3) | | | | | | | | | | | | | | | +--Pseudomonasoleovorans/pseudoalcaligenesgroup (1) | | | | | | | | | | | | | | | | | +--Pseudomonas pseudoalcaligenes KF707 = NBRC 110670 (1) | | | | | | | | | | | | | | | +--Pseudomonas alcaligenes NBRC 14159 (1) | | | | | | | | | | | | | | | +--Pseudomonas resinovorans NBRC 106553 (1) | | | | | | | | | | | | | +--Pseudomonas knackmussii B13 (1) | | | | | | | | | | | | | +--Pseudomonas taeanensis MS-3 (1) | | | | | | | | | | | | | +--Pseudomonas syringae pv. spinaceae (1) | | | | | | | | | | | | | +--Pseudomonasputidagroup (1) | | | | | | | | | | | | | | | +--Pseudomonas putida S11 (1) | | | | | | | | | | | | | +--Pseudomonas caspiana (1) | | | | | | | | | | | | | +--Pseudomonaspertucinogenagroup (1) | | | | | | | | | | | | | | | +--Pseudomonas denitrificans ATCC 13867 (1) | | | | | | | | | | | | | +--Pseudomonas syringae pv. pisi str. 1704B (1) | | | | | | | | | | | | | +--Pseudomonas sp. Lz4W (1) | | | | | | | | | | | +--Pseudomonas sp. 21C1 (1) | | | | | | | | | | | +--Pseudomonas sp. J237 (1) | | | | | | | | | | | +--Pseudomonas oryzihabitans (1) | | | | | | | | | | | +--Pseudomonas sp. Bc-h (1) | | | | | | | | | | | +--Pseudomonas fluorescens Pf-5 (1) | | | | | | | | | | | +--Pseudomonas fulva 12-X (1) | | | | | | | | | | | +--Pseudomonas sp. 5 (1) | | | | | | | | | | | +--Oblitimonas alkaliphila (1) | | | | | | | | | | | +--Pseudomonas brenneri (1) | | | | | | | | | | | +--Pseudomonas fluorescens HK44 (1) | | | | | | | | | | | +--Pseudomonas syringae (1) | | | | | | | | | | | +--Pseudomonas sp. EGD-AK9 (1) | | | | | | | | | | | +--Pseudomonas batumici (1) | | | | | | | | | | | +--Pseudomonas sp. GM78 (1) | | | | | | | | | | | +--Pseudomonas monteilii (1) | | | | | | | | | | | +--Pseudomonas chlororaphis subsp. aureofaciens 30-84 (1) | | | | | | | | | | | +--Pseudomonas putida KT2440 (1) | | | | | | | | | | | +--Cellvibrio japonicus Ueda107 (1) | | | | | | | | | | | +--Pseudomonas agarici (1) | | | | | | | | | | | +--Pseudomonas sp. TTU2014-080ASC (1) | | | | | | | | | | | +--Pseudomonas sp. 63_8 (1) | | | | | | | | | | | +--Pseudomonas cremoricolorata (1) | | | | | | | | | | | +--Pseudomonas stutzeri (1) | | | | | | | | | | | +--Pseudomonas sp. MF4836 (1) | | | | | | | | | | | +--Pseudomonas sp. HPB0071 (1) | | | | | | | | | | | +--Pseudomonas rhizosphaerae (1) | | | | | | | | | | | +--Pseudomonas sp. BZ93 (1) | | | | | | | | | | | +--Pseudomonas fuscovaginae (1) | | | | | | | | | | | +--Pseudomonas sp. BAY1663 (1) | | | | | | | | | | | +--Pseudomonas sp. BRH_c35 (1) | | | | | | | | | | | +--Pseudomonas hussainii (1) | | | | | | | | | +--Moraxellaceae (49) | | | | | | | | | | | +--Acinetobacter sp. ANC 4558 (1) | | | | | | | | | | | +--Acinetobacter pragensis (1) | | | | | | | | | | | +--Acinetobacter sp. RIFCSPHIGHO2_12_41_5 (1) | | | | | | | | | | | +--Psychrobacter sp. PRwf-1 (1) | | | | | | | | | | | +--Moraxella (4) | | | | | | | | | | | | | +--Moraxella bovoculi 237 (1) | | | | | | | | | | | | | +--Moraxella cuniculi DSM 21768 (1) | | | | | | | | | | | | | +--Moraxella macacae 0408225 (1) | | | | | | | | | | | | | +--Moraxella catarrhalis BBH18 (1) | | | | | | | | | | | +--Moraxella sp. SN9-4M (1) | | | | | | | | | | | +--Acinetobacter sp. TTH0-4 (1) | | | | | | | | | | | +--Acinetobacter sp. Ver3 (1) | | | | | | | | | | | +--Acinetobacter sp. SFC (1) | | | | | | | | | | | +--Moraxella atlantae (1) | | | | | | | | | | | +--Enhydrobacter aerosaccus SK60 (1) | | | | | | | | | | | +--Acinetobacter populi (1) | | | | | | | | | | | +--Psychrobacter arcticus 273-4 (1) | | | | | | | | | | | +--Moraxella caviae (1) | | | | | | | | | | | +--Acinetobacter radioresistens SK82 (1) | | | | | | | | | | | +--Acinetobacter sp. ANC 3832 (1) | | | | | | | | | | | +--Acinetobacter sp. NCu2D-2 (1) | | | | | | | | | | | +--Enhydrobacter aerosaccus (1) | | | | | | | | | | | +--Acinetobacter sp. CIP 102637 (1) | | | | | | | | | | | +--Acinetobacter sp. TGL-Y2 (1) | | | | | | | | | | | +--Acinetobacter qingfengensis (1) | | | | | | | | | | | +--Acinetobacter sp. G30 (1) | | | | | | | | | | | +--Acinetobacter johnsonii SH046 (1) | | | | | | | | | | | +--Acinetobacter sp. ANC 3813 (1) | | | | | | | | | | | +--Moraxella bovis (1) | | | | | | | | | | | +--Moraxella nonliquefaciens (1) | | | | | | | | | | | +--Acinetobacter celticus (1) | | | | | | | | | | | +--Acinetobacter sp. ANC 4218 (1) | | | | | | | | | | | +--Acinetobacter equi (1) | | | | | | | | | | | +--Acinetobacter towneri (1) | | | | | | | | | | | +--Acinetobacter sp. 38-8 (1) | | | | | | | | | | | +--Acinetobacter (10) | | | | | | | | | | | | | +--Acinetobacter haemolyticus CIP 64.3 (1) | | | | | | | | | | | | | +--Acinetobacter gerneri DSM 14967 = CIP 107464 (1) | | | | | | | | | | | | | +--Acinetobacter nectaris CIP 110549 (1) | | | | | | | | | | | | | +--Acinetobacter tandoii DSM 14970 = CIP 107469 (1) | | | | | | | | | | | | | +--Acinetobacter brisouii CIP 110357 (1) | | | | | | | | | | | | | +--Acinetobacter baumannii (1) | | | | | | | | | | | | | +--Acinetobacter bouvetii DSM 14964 = CIP 107468 (1) | | | | | | | | | | | | | +--Acinetobacter bohemicus ANC 3994 (1) | | | | | | | | | | | | | +--Acinetobacter guillouiae CIP 63.46 (1) | | | | | | | | | | | | | +--Acinetobacter sp. CAG:196 (1) | | | | | | | | | | | +--Alkanindiges sp. H1 (1) | | | | | | | | | | | +--Acinetobacter sp. ADP1 (1) | | | | | | | | | | | +--Acinetobacter larvae (1) | | | | | | | | | | | +--Moraxella lacunata (1) | | | | | | | | | | | +--Moraxella lincolnii (1) | | | | | | | | | +--Oceanicoccus sagamiensis (1) | | | | | | | | | +--Ventosimonadaceae (1) | | | | | | | | | +--Ventosimonas gracilis (1) | | | | | | | +--Nevskiales (1) | | | | | | | | | +--Sinobacteraceae (1) | | | | | | | | | +--Hydrocarboniphaga (1) | | | | | | | | | +--Hydrocarboniphaga effusa AP103 (1) | | | | | | | +--Solemya velum gill symbiont (1) | | | | | | | +--Immundisolibacterales (1) | | | | | | | | | +--Immundisolibacteraceae (1) | | | | | | | | | +--Immundisolibacter cernigliae (1) | | | | | | | +--Salinisphaerales (2) | | | | | | | | | +--Salinisphaeraceae (2) | | | | | | | | | +--Salinisphaera shabanensis E1L3A (1) | | | | | | | | | +--Salinisphaera (1) | | | | | | | | | +--Salinisphaera hydrothermalis C41B8 (1) | | | | | | | +--Vibrionales (60) | | | | | | | | | +--Vibrionaceae (60) | | | | | | | | | +--Vibrio mytili (1) | | | | | | | | | +--Vibrio vulnificus YJ016 (1) | | | | | | | | | +--Vibrio sp. R-40493 (1) | | | | | | | | | +--Vibrio caribbenthicus ATCC BAA-2122 (1) | | | | | | | | | +--Vibrio metschnikovii CIP 69.14 (1) | | | | | | | | | +--Photobacterium aquae (1) | | | | | | | | | +--Vibrio tubiashii ATCC 19109 (1) | | | | | | | | | +--Vibrio coralliilyticus (1) | | | | | | | | | +--Vibrio cholerae O1 biovar El Tor str. N16961 (1) | | | | | | | | | +--Photobacterium proteolyticum (1) | | | | | | | | | +--Vibrio panuliri (1) | | | | | | | | | +--Vibrio sp. N418 (1) | | | | | | | | | +--Vibrio fischeri ES114 (1) | | | | | | | | | +--Vibrio sp. F10 (1) | | | | | | | | | +--Photobacterium halotolerans (1) | | | | | | | | | +--Vibrio harveyi ATCC BAA-1116 (1) | | | | | | | | | +--Photobacterium sp. CECT 7614 (1) | | | | | | | | | +--Vibrio sp. AND4 (1) | | | | | | | | | +--Photobacterium angustum S14 (1) | | | | | | | | | +--Photobacterium iliopiscarium (1) | | | | | | | | | +--Vibrio (7) | | | | | | | | | | | +--Vibrio rumoiensis 1S-45 (1) | | | | | | | | | | | +--Vibrio cincinnatiensis DSM 19608 (1) | | | | | | | | | | | +--Vibrioharveyigroup (1) | | | | | | | | | | | | | +--Vibrio azureus NBRC 104587 (1) | | | | | | | | | | | +--Vibrio ezurae NBRC 102218 (1) | | | | | | | | | | | +--Vibrio aerogenes CECT 7868 (1) | | | | | | | | | | | +--Vibrio genomosp. F6 str. FF-238 (1) | | | | | | | | | | | +--Vibrio proteolyticus NBRC 13287 (1) | | | | | | | | | +--Enterovibrio sp. sw014 (1) | | | | | | | | | +--Photobacterium damselae subsp. damselae CIP 102761 (1) | | | | | | | | | +--Vibrio anguillarum 775 (1) | | | | | | | | | +--Vibrio palustris (1) | | | | | | | | | +--Photobacterium jeanii (1) | | | | | | | | | +--Vibrio sp. C7 (1) | | | | | | | | | +--Vibrio cidicii (1) | | | | | | | | | +--Photobacterium (1) | | | | | | | | | | | +--Photobacteriumdamselae (1) | | | | | | | | | | | +--Photobacterium damselae subsp. piscicida DI21 (1) | | | | | | | | | +--Vibrio shilonii (1) | | | | | | | | | +--Vibrio furnissii NCTC 11218 (1) | | | | | | | | | +--Vibrio mangrovi (1) | | | | | | | | | +--Vibrio sp. qd031 (1) | | | | | | | | | +--Vibrio sp. EJY3 (1) | | | | | | | | | +--Photobacterium profundum SS9 (1) | | | | | | | | | +--Enterovibrio coralii (1) | | | | | | | | | +--Photobacterium sp. Gung47 (1) | | | | | | | | | +--Enterovibrio (1) | | | | | | | | | | | +--Enterovibrio nigricans DSM 22720 (1) | | | | | | | | | +--Grimontia sp. AD028 (1) | | | | | | | | | +--Photobacterium galatheae (1) | | | | | | | | | +--Vibrio splendidus LGP32 (1) | | | | | | | | | +--Vibrio nigripulchritudo (1) | | | | | | | | | +--Vibrio variabilis (1) | | | | | | | | | +--Photobacterium ganghwense (1) | | | | | | | | | +--Vibrio nereis (1) | | | | | | | | | +--Vibrio sp. JCM 19236 (1) | | | | | | | | | +--Vibrio sp. MEBiC08052 (1) | | | | | | | | | +--Vibrio ponticus (1) | | | | | | | | | +--Vibrio sinaloensis (1) | | | | | | | | | +--Salinivibrio sp. KP-1 (1) | | | | | | | | | +--Vibrio hepatarius (1) | | | | | | | | | +--Vibrio ishigakensis (1) | | | | | | | | | +--Vibrio parahaemolyticus RIMD 2210633 (1) | | | | | | | | | +--Photobacterium marinum (1) | | | | | | | +--Cellvibrionales (9) | | | | | | | | | +--Cellvibrionaceae (2) | | | | | | | | | | | +--Cellvibrio sp. BR (1) | | | | | | | | | | | +--Simiduia (1) | | | | | | | | | | | +--Simiduia agarivorans SA1 = DSM 21679 (1) | | | | | | | | | +--Microbulbiferaceae (1) | | | | | | | | | | | +--Microbulbifer sp. ZGT114 (1) | | | | | | | | | +--Halieaceae (2) | | | | | | | | | | | +--Halioglobus sp. HI00S01 (1) | | | | | | | | | | | +--Pseudohaliea (1) | | | | | | | | | | | +--Pseudohaliea rubra DSM 19751 (1) | | | | | | | | | +--Porticoccaceae (2) | | | | | | | | | | | +--unclassifiedPorticoccaceae (2) | | | | | | | | | | | +--SAR92 bacterium BACL26 MAG-121220-bin70 (1) | | | | | | | | | | | +--SAR92 bacterium BACL16 MAG-120619-bin48 (1) | | | | | | | | | +--Spongiibacteraceae (2) | | | | | | | | | +--Spongiibacter sp. IMCC21906 (1) | | | | | | | | | +--gamma proteobacterium BDW918 (1) | | | | | | | +--Chromatiales (41) | | | | | | | | | +--Ectothiorhodospiraceae (15) | | | | | | | | | | | +--Thiorhodospira sibirica ATCC 700588 (1) | | | | | | | | | | | +--Alkalilimnicola ehrlichii MLHE-1 (1) | | | | | | | | | | | +--Oceanococcus atlanticus (1) | | | | | | | | | | | +--Thioalkalivibrio denitrificans (1) | | | | | | | | | | | +--Thioalkalivibrio sulfidophilus HL-EbGr7 (1) | | | | | | | | | | | +--Halorhodospira (1) | | | | | | | | | | | | | +--Halorhodospira halochloris str. A (1) | | | | | | | | | | | +--Thioalkalivibrio (1) | | | | | | | | | | | | | +--Thioalkalivibrio nitratireducens DSM 14787 (1) | | | | | | | | | | | +--Nitrococcus mobilis Nb-231 (1) | | | | | | | | | | | +--Spiribacter (1) | | | | | | | | | | | | | +--Spiribacter salinus M19-40 (1) | | | | | | | | | | | +--Halorhodospira halophila SL1 (1) | | | | | | | | | | | +--Acidiferrobacter thiooxydans (1) | | | | | | | | | | | +--Thioalkalivibrio halophilus (1) | | | | | | | | | | | +--Spiribacter curvatus (1) | | | | | | | | | | | +--Thioalkalivibrio sp. K90mix (1) | | | | | | | | | | | +--Ectothiorhodospira sp. PHS-1 (1) | | | | | | | | | +--Chromatiales bacterium RIFOXYA1_FULL_46_5 (1) | | | | | | | | | +--Chromatiaceae (18) | | | | | | | | | | | +--Thiorhodococcus drewsii AZ1 (1) | | | | | | | | | | | +--Rheinheimera sp. A13L (1) | | | | | | | | | | | +--Candidatus Tenderia electrophaga (1) | | | | | | | | | | | +--Thiocapsa sp. KS1 (1) | | | | | | | | | | | +--Rheinheimera sp. E407-8 (1) | | | | | | | | | | | +--Allochromatium vinosum DSM 180 (1) | | | | | | | | | | | +--Rheinheimera sp. SA_1 (1) | | | | | | | | | | | +--Rheinheimera sp. F8 (2) | | | | | | | | | | | +--Thiocapsa marina 5811 (1) | | | | | | | | | | | +--Thiohalocapsa (1) | | | | | | | | | | | | | +--uncultured Thiohalocapsa sp. PB-PSB1 (1) | | | | | | | | | | | +--Thiorhodovibrio sp. 970 (1) | | | | | | | | | | | +--Marichromatium purpuratum 984 (1) | | | | | | | | | | | +--Thiocystis violascens DSM 198 (1) | | | | | | | | | | | +--Thioflavicoccus (1) | | | | | | | | | | | | | +--Thioflavicoccus mobilis 8321 (1) | | | | | | | | | | | +--Nitrosococcus oceani ATCC 19707 (1) | | | | | | | | | | | +--Arsukibacterium sp. MJ3 (1) | | | | | | | | | | | +--Nitrosococcus halophilus Nc4 (1) | | | | | | | | | +--Chromatiales bacterium USCg_Taylor (1) | | | | | | | | | +--Halothiobacillaceae (3) | | | | | | | | | | | +--Halothiobacillus sp. XI15 (1) | | | | | | | | | | | +--Halothiobacillus neapolitanus c2 (1) | | | | | | | | | | | +--Halothiobacillus sp. LS2 (1) | | | | | | | | | +--Woeseiaceae (1) | | | | | | | | | | | +--Woeseia oceani (1) | | | | | | | | | +--Chromatiales bacterium (ex Bugula neritina AB1) (1) | | | | | | | | | +--Wenzhouxiangellaceae (1) | | | | | | | | | +--Wenzhouxiangella marina (1) | | | | | | | +--Thiotrichales (27) | | | | | | | | | +--Francisellaceae (4) | | | | | | | | | | | +--Francisella (1) | | | | | | | | | | | | | +--Francisellanoatunensis (1) | | | | | | | | | | | | | +--Francisella noatunensis subsp. orientalis str. Toba 04 (1) | | | | | | | | | | | +--Francisella sp. CA97-1460 (1) | | | | | | | | | | | +--Francisella tularensis subsp. tularensis SCHU S4 (1) | | | | | | | | | | | +--Francisella cantonensis (1) | | | | | | | | | +--Thiotrichaceae (9) | | | | | | | | | | | +--Beggiatoa sp. IS2 (1) | | | | | | | | | | | +--Beggiatoa alba B18LD (1) | | | | | | | | | | | +--Achromatium sp. WMS2 (1) | | | | | | | | | | | +--Thiothrix eikelboomii (1) | | | | | | | | | | | +--Thiothrix nivea DSM 5205 (1) | | | | | | | | | | | +--Thiothrix lacustris (3) | | | | | | | | | | | +--Achromatium sp. WMS3 (1) | | | | | | | | | +--Piscirickettsiaceae (12) | | | | | | | | | | | +--Cycloclasticus sp. symbiont of Bathymodiolus heckerae (1) | | | | | | | | | | | +--Methylophaga sp. 41_12_T18 (1) | | | | | | | | | | | +--Cycloclasticus sp. symbiont of Poecilosclerida sp. N (1) | | | | | | | | | | | +--Piscirickettsia litoralis (1) | | | | | | | | | | | +--Cycloclasticus sp. P1 (1) | | | | | | | | | | | +--Methylophaga thiooxydans DMS010 (1) | | | | | | | | | | | +--Methylophaga sp. JAM1 (1) | | | | | | | | | | | +--Methylophaga sp. JAM7 (1) | | | | | | | | | | | +--Piscirickettsia salmonis (1) | | | | | | | | | | | +--Cycloclasticus sp. symbiont of Poecilosclerida sp. M (1) | | | | | | | | | | | +--Methylophaga aminisulfidivorans MP (1) | | | | | | | | | | | +--Methylophaga (1) | | | | | | | | | | | +--Methylophaga lonarensis MPL (1) | | | | | | | | | +--unclassifiedThiotrichales (1) | | | | | | | | | | | +--Thiotrichales bacterium SG8_50 (1) | | | | | | | | | +--Francisella endosymbiont of Amblyomma maculatum (1) | | | | | | | +--Acidithiobacillales (4) | | | | | | | +--Acidithiobacillaceae (4) | | | | | | | +--Acidithiobacillus ferrooxidans ATCC 23270 (1) | | | | | | | +--Acidithiobacillus caldus SM-1 (1) | | | | | | | +--Acidithiobacillus sp. GGI-221 (1) | | | | | | | +--Acidithiobacillus thiooxidans (1) | | | | | +--Candidatus Lambdaproteobacteria bacterium RIFOXYD2_FULL_50_16 (1) | | | | | +--magnetite-containing magnetic vibrio (1) | | | | | +--Candidatus Muproteobacteria bacterium RBG_16_65_31 (1) | | | | | +--Hydrogenophilalia (3) | | | | | | | +--Hydrogenophilales (3) | | | | | | | +--Hydrogenophilales bacterium RIFOXYA1_FULL_63_33 (1) | | | | | | | +--Hydrogenophilaceae (1) | | | | | | | | | +--Hydrogenophilaceae bacterium CG1_02_62_390 (1) | | | | | | | +--Hydrogenophilales bacterium RIFOXYD1_FULL_62_11 (1) | | | | | +--Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18 (1) | | | +--unclassifiedBacteria (73) | | | | | +--bacterium 42_11 (1) | | | | | +--Candidatus Vecturithrix granuli (1) | | | | | +--bacteria symbiont BFo1 of Frankliniella occidentalis (1) | | | | | +--bacterium SM23_31 (1) | | | | | +--Candidatus Moduliflexus flocculans (1) | | | | | +--bacteria symbiont BFo2 of Frankliniella occidentalis (1) | | | | | +--bacterium E08(2017) (1) | | | | | +--bacterium B13(2017) (1) | | | | | +--bacterium AM6 (1) | | | | | +--bacterium SCN 62-11 (1) | | | | | +--Bacteriacandidatephyla (63) | | | | | +--candidatedivisionNC10 (3) | | | | | | | +--candidate division NC10 bacterium CSP1-5 (1) | | | | | | | +--candidate division NC10 bacterium RIFCSPLOWO2_02_FULL_66_22 (1) | | | | | | | +--candidate division NC10 bacterium RBG_16_65_8 (1) | | | | | +--Candidatus Wirthbacteria bacterium CG2_30_54_11 (1) | | | | | +--Candidatus Rokubacteria bacterium 13_2_20CM_2_64_8 (1) | | | | | +--Candidatus Margulisbacteria bacterium GWE2_39_32 (1) | | | | | +--candidate division TA06 bacterium DG_26 (1) | | | | | +--Candidatus Glassbacteria bacterium RBG_16_58_8 (1) | | | | | +--Candidatus Rokubacteria bacterium RIFCSPHIGHO2_02_FULL_69_13 (1) | | | | | +--candidatedivisionKSB1 (2) | | | | | | | +--candidate division KSB1 bacterium 4484_87 (1) | | | | | | | +--candidate division KSB1 bacterium 4484_188 (1) | | | | | +--Candidatus Desantisbacteria bacterium CG1_02_38_46 (1) | | | | | +--Candidatus Edwardsbacteria bacterium GWF2_54_11 (1) | | | | | +--Candidatus Glassbacteria bacterium GWA2_58_10 (1) | | | | | +--Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_72_37 (1) | | | | | +--Candidatus Rokubacteria bacterium GWA2_70_23 (1) | | | | | +--candidate division CPR1 bacterium GW2011_GWC1_49_13 (1) | | | | | +--CandidatusAtribacteria (3) | | | | | | | +--Candidatus Atribacteria bacterium CG2_30_33_13 (1) | | | | | | | +--Candidatus Atribacteria bacterium RBG_16_35_8 (1) | | | | | | | +--Candidatus Atribacteria bacterium RBG_19FT_COMBO_35_14 (1) | | | | | +--Candidatus Rokubacteria bacterium 13_1_20CM_70_15 (1) | | | | | +--Candidatus Fischerbacteria bacterium RBG_13_37_8 (1) | | | | | +--Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11 (1) | | | | | +--candidate division TA06 bacterium DG_78 (1) | | | | | +--candidatedivisionBRC1 (1) | | | | | | | +--candidate division BRC1 bacterium SM23_51 (1) | | | | | +--Patescibacteriagroup (5) | | | | | | | +--Microgenomatesgroup (3) | | | | | | | | | +--Candidatus Daviesbacteria bacterium GW2011_GWC2_40_12 (1) | | | | | | | | | +--Candidatus Chisholmbacteria bacterium RIFCSPLOWO2_01_FULL_49_14 (1) | | | | | | | | | +--Microgenomates group bacterium RIFCSPHIGHO2_01_FULL_45_11 (1) | | | | | | | +--Parcubacteriagroup (2) | | | | | | | +--Parcubacteria group bacterium CG1_02_44_65 (1) | | | | | | | +--Candidatus Portnoybacteria bacterium RBG_19FT_COMBO_36_7 (1) | | | | | +--Candidatus Schekmanbacteria bacterium RIFCSPLOWO2_12_FULL_38_15 (1) | | | | | +--Candidatus Rokubacteria bacterium 13_1_40CM_4_69_5 (1) | | | | | +--Candidatus Rokubacteria bacterium RIFCSPHIGHO2_02_FULL_73_26 (1) | | | | | +--Candidatus Schekmanbacteria bacterium RBG_13_48_7 (1) | | | | | +--candidate division WOR-3 bacterium 4484_100 (1) | | | | | +--Candidatus Lindowbacteria bacterium RIFCSPLOWO2_12_FULL_62_27 (1) | | | | | +--Candidatus Rokubacteria bacterium 13_1_20CM_2_70_7 (1) | | | | | +--Candidatus Rokubacteria bacterium 13_1_40CM_68_15 (1) | | | | | +--candidate division WOR_3 bacterium SM1_77 (1) | | | | | +--CandidatusPeregrinibacteria (8) | | | | | | | +--Candidatus Peregrinibacteria bacterium GW2011_GWF2_39_17 (1) | | | | | | | +--CandidatusPeribacteria (1) | | | | | | | | | +--Candidatus Peribacteria bacterium RIFCSPHIGHO2_01_FULL_51_9 (1) | | | | | | | +--Candidatus Peregrinibacteria bacterium GW2011_GWF2_38_29 (1) | | | | | | | +--Candidatus Peregrinibacteria bacterium GW2011_GWF2_43_17 (1) | | | | | | | +--Candidatus Peregrinibacteria bacterium RIFCSPLOWO2_02_FULL_39_10 (1) | | | | | | | +--Candidatus Peregrinibacteria bacterium RIFOXYB2_FULL_32_7 (1) | | | | | | | +--Candidatus Peregrinibacteria bacterium CG2_30_44_17 (1) | | | | | | | +--Candidatus Peregrinibacteria bacterium GW2011_GWA2_44_7 (1) | | | | | +--candidate division KD3-62 bacterium DG_56 (1) | | | | | +--candidate division WOR_3 bacterium SM23_42 (1) | | | | | +--Candidatus Glassbacteria bacterium RIFCSPLOWO2_12_FULL_58_11 (1) | | | | | +--Candidatus Rokubacteria bacterium 13_1_40CM_2_68_8 (1) | | | | | +--Candidatus Rokubacteria bacterium 13_1_20CM_4_68_9 (1) | | | | | +--Candidatus Rokubacteria bacterium 13_1_20CM_4_70_14 (1) | | | | | +--candidate division WOR-3 bacterium RBG_13_43_14 (1) | | | | | +--candidate division TA06 bacterium 34_109 (1) | | | | | +--Candidatus Rokubacteria bacterium 13_2_20CM_2_70_11 (1) | | | | | +--candidate division WOR_1 bacterium DG_54_3 (1) | | | | | +--Candidatus Schekmanbacteria bacterium RBG_16_38_10 (2) | | | | | +--Candidatus Firestonebacteria bacterium RIFOXYC2_FULL_39_67 (1) | | | | | +--Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22 (1) | | | | | +--Candidatus Eisenbacteria bacterium RBG_16_71_46 (1) | | | | | +--Candidatus Firestonebacteria bacterium RIFOXYA2_FULL_40_8 (1) | | | +--Planctomycetes (4) | | | | | +--Planctomycetacia (4) | | | | | +--Planctomycetales (4) | | | | | +--planctomycete KSU-1 (1) | | | | | +--Candidatus Scalindua brodae (1) | | | | | +--Planctomycetaceae (2) | | | | | +--Planctomyces limnophilus DSM 3776 (1) | | | | | +--Isosphaera pallida ATCC 43644 (1) | | | +--Spirochaetes (15) | | | | | +--Spirochaetes bacterium GWF1_41_5 (1) | | | | | +--Spirochaetes bacterium GWF1_49_6 (1) | | | | | +--Spirochaetes bacterium RBG_13_51_14 (1) | | | | | +--Spirochaetes bacterium GWF1_31_7 (1) | | | | | +--Spirochaetales (2) | | | | | | | +--Spirochaetaceae (2) | | | | | | | +--Spirochaeta smaragdinae DSM 11293 (1) | | | | | | | +--Spirochaeta sp. Grapes (1) | | | | | +--Spirochaetes bacterium RBG_16_49_21 (1) | | | | | +--Spirochaetes bacterium RBG_16_67_19 (1) | | | | | +--Spirochaetes bacterium GWF1_51_8 (1) | | | | | +--Spirochaetes bacterium DG_61 (1) | | | | | +--Spirochaetia (2) | | | | | | | +--Brachyspirales (1) | | | | | | | | | +--Brachyspiraceae (1) | | | | | | | | | +--Brachyspira (1) | | | | | | | | | +--Brachyspira sp. CAG:484 (1) | | | | | | | +--Spirochaetales (1) | | | | | | | +--Spirochaetaceae (1) | | | | | | | +--Spirochaetaceae bacterium 4572_59 (1) | | | | | +--Spirochaetes bacterium GWB1_27_13 (1) | | | | | +--Spirochaetes bacterium GWB1_66_5 (1) | | | | | +--Spirochaetes bacterium GWC2_52_13 (1) | | | +--Synergistetes bacterium SGP1 (1) | | | +--Synergistetes (5) | | | | | +--Synergistia (5) | | | | | +--Synergistales (5) | | | | | +--Synergistales bacterium 58_81 (1) | | | | | +--Synergistaceae (3) | | | | | | | +--Thermanaerovibrio acidaminovorans DSM 6589 (1) | | | | | | | +--Aminomonas paucivorans DSM 12260 (1) | | | | | | | +--Dethiosulfovibrio peptidovorans DSM 11002 (1) | | | | | +--Synergistales bacterium 54_24 (1) | | | +--Firmicutes (539) | | | | | +--Clostridia (222) | | | | | | | +--butyrate-producing bacterium SM4/1 (1) | | | | | | | +--Clostridiales bacterium BV3C26 (1) | | | | | | | +--Natranaerobiales (2) | | | | | | | | | +--Natranaerobiaceae (2) | | | | | | | | | +--Natranaerobius trueperi (1) | | | | | | | | | +--Natranaerobius thermophilus JW/NM-WN-LF (1) | | | | | | | +--Clostridiales (193) | | | | | | | | | +--Heliobacteriaceae (1) | | | | | | | | | | | +--Heliobacterium modesticaldum Ice1 (1) | | | | | | | | | +--ClostridialesFamilyXII.IncertaeSedis (1) | | | | | | | | | | | +--Fusibacter sp. 3-D3-R-P8ASC2010 (1) | | | | | | | | | +--Lachnospiraceae bacterium ACC2 (1) | | | | | | | | | +--Lachnospiraceae bacterium 9_1_43BFAA (1) | | | | | | | | | +--Peptostreptococcaceae (2) | | | | | | | | | | | +--Filifactor alocis ATCC 35896 (1) | | | | | | | | | | | +--Peptostreptococcus stomatis DSM 17678 (1) | | | | | | | | | +--Eubacteriaceae (16) | | | | | | | | | | | +--Eubacterium ventriosum ATCC 27560 (1) | | | | | | | | | | | +--Eubacterium limosum KIST612 (1) | | | | | | | | | | | +--Eubacterium saphenum ATCC 49989 (1) | | | | | | | | | | | +--Acetobacterium bakii (1) | | | | | | | | | | | +--Eubacterium rectale ATCC 33656 (1) | | | | | | | | | | | +--Eubacterium uniforme (1) | | | | | | | | | | | +--Anaerofustis stercorihominis DSM 17244 (1) | | | | | | | | | | | +--Pseudoramibacter alactolyticus ATCC 23263 (1) | | | | | | | | | | | +--Acetobacterium wieringae (1) | | | | | | | | | | | +--Eubacterium ruminantium (1) | | | | | | | | | | | +--Eubacterium siraeum 70/3 (1) | | | | | | | | | | | +--Eubacterium angustum (1) | | | | | | | | | | | +--Eubacterium hadrum (1) | | | | | | | | | | | +--Eubacterium eligens ATCC 27750 (1) | | | | | | | | | | | +--Eubacterium coprostanoligenes (1) | | | | | | | | | | | +--Eubacterium cellulosolvens 6 (1) | | | | | | | | | +--Lachnospiraceae (15) | | | | | | | | | | | +--Marvinbryantia formatexigens DSM 14469 (1) | | | | | | | | | | | +--Roseburia hominis A2-183 (1) | | | | | | | | | | | +--Catonella morbi ATCC 51271 (1) | | | | | | | | | | | +--Pseudobutyrivibrio ruminis (1) | | | | | | | | | | | +--Oribacterium sinus F0268 (1) | | | | | | | | | | | +--Butyrivibrio hungatei (1) | | | | | | | | | | | +--Coprococcus catus GD/7 (1) | | | | | | | | | | | +--Clostridium lentocellum DSM 5427 (1) | | | | | | | | | | | +--Butyrivibrio proteoclasticus B316 (1) | | | | | | | | | | | +--Roseburia intestinalis XB6B4 (1) | | | | | | | | | | | +--Clostridium proteoclasticum (1) | | | | | | | | | | | +--Oribacterium sp. ACB1 (1) | | | | | | | | | | | +--Lachnobacterium bovis (1) | | | | | | | | | | | +--Butyrivibrio fibrisolvens 16/4 (1) | | | | | | | | | | | +--Johnsonella ignava ATCC 51276 (1) | | | | | | | | | +--ClostridialesFamilyXVIII.IncertaeSedis (3) | | | | | | | | | | | +--Symbiobacterium thermophilum (2) | | | | | | | | | | | +--Symbiobacterium thermophilum IAM 14863 (1) | | | | | | | | | +--Oscillospiraceae (1) | | | | | | | | | | | +--Oscillibacter valericigenes Sjm18-20 (1) | | | | | | | | | +--Lachnospiraceae bacterium ICM7 (1) | | | | | | | | | +--Eubacteriaceae bacterium ACC19a (1) | | | | | | | | | +--Ruminococcaceae (17) | | | | | | | | | | | +--Ruminococcus sp. 18P13 (1) | | | | | | | | | | | +--Anaerotruncus colihominis DSM 17241 (1) | | | | | | | | | | | +--Faecalibacterium prausnitzii (1) | | | | | | | | | | | +--Faecalibacterium prausnitzii SL3/3 (1) | | | | | | | | | | | +--Faecalibacterium prausnitzii A2-165 (1) | | | | | | | | | | | +--Ruminococcus sp. SR1/5 (1) | | | | | | | | | | | +--Ethanoligenens harbinense YUAN-3 (1) | | | | | | | | | | | +--Ruminococcaceae bacterium D16 (1) | | | | | | | | | | | +--Bacteroides cellulosolvens ATCC 35603 (2) | | | | | | | | | | | +--Faecalibacterium cf. prausnitzii KLE1255 (1) | | | | | | | | | | | +--Faecalibacterium prausnitzii L2-6 (1) | | | | | | | | | | | +--Acetivibrio ethanolgignens (1) | | | | | | | | | | | +--Ruminococcus flavefaciens (1) | | | | | | | | | | | +--Ruminococcus torques L2-14 (1) | | | | | | | | | | | +--Ruminococcus lactaris ATCC 29176 (1) | | | | | | | | | | | +--Subdoligranulum variabile DSM 15176 (1) | | | | | | | | | +--Lachnospiraceae bacterium 3_1_57FAA_CT1 (1) | | | | | | | | | +--ClostridialesFamilyXI.IncertaeSedis (9) | | | | | | | | | | | +--Peptoniphilus lacrimalis 315-B (1) | | | | | | | | | | | +--Peptoniphilus asaccharolyticus DSM 20463 (1) | | | | | | | | | | | +--Anaerococcus prevotii ACS-065-V-Col13 (1) | | | | | | | | | | | +--Peptoniphilus duerdenii ATCC BAA-1640 (1) | | | | | | | | | | | +--Peptoniphilus sp. oral taxon 375 str. F0436 (1) | | | | | | | | | | | +--Peptoniphilus indolicus ATCC 29427 (1) | | | | | | | | | | | +--Anaerococcus vaginalis ATCC 51170 (1) | | | | | | | | | | | +--Peptoniphilus sp. RMA 16757 (1) | | | | | | | | | | | +--Peptoniphilus sp. oral taxon 386 str. F0131 (1) | | | | | | | | | +--Lachnospiraceae bacterium A2 (1) | | | | | | | | | +--ClostridialesFamilyXIII.IncertaeSedis (2) | | | | | | | | | | | +--Mogibacterium sp. CM50 (1) | | | | | | | | | | | +--Mogibacterium pumilum (1) | | | | | | | | | +--Clostridiaceae (82) | | | | | | | | | | | +--Thermotalea metallivorans (1) | | | | | | | | | | | +--Clostridium saccharolyticum WM1 (1) | | | | | | | | | | | +--Clostridium pasteurianum BC1 (2) | | | | | | | | | | | +--Clostridium aceticum (2) | | | | | | | | | | | +--Clostridium tetani E88 (1) | | | | | | | | | | | +--Clostridium beijerinckii NCIMB 8052 (2) | | | | | | | | | | | +--Clostridium carboxidivorans P7 (4) | | | | | | | | | | | +--Clostridium thermoalcaliphilum (1) | | | | | | | | | | | +--Clostridium formicaceticum (2) | | | | | | | | | | | +--Clostridium disporicum (1) | | | | | | | | | | | +--Clostridium methylpentosum DSM 5476 (1) | | | | | | | | | | | +--Clostridium perfringens str. 13 (1) | | | | | | | | | | | +--Clostridium sp. D5 (1) | | | | | | | | | | | +--Clostridium cellulosi (1) | | | | | | | | | | | +--Clostridium fallax (1) | | | | | | | | | | | +--Clostridium cellulolyticum H10 (1) | | | | | | | | | | | +--Clostridium phytofermentans ISDg (1) | | | | | | | | | | | +--Clostridium saccharoperbutylacetonicum ATCC 27021 (1) | | | | | | | | | | | +--Clostridium cellulovorans 743B (1) | | | | | | | | | | | +--Clostridium hiranonis DSM 13275 (1) | | | | | | | | | | | +--Clostridium purinilyticum (1) | | | | | | | | | | | +--Clostridium sticklandii DSM 519 (1) | | | | | | | | | | | +--Clostridium hathewayi WAL-18680 (1) | | | | | | | | | | | +--Clostridium roseum (2) | | | | | | | | | | | +--Oxobacter pfennigii (3) | | | | | | | | | | | +--Clostridium sordellii (1) | | | | | | | | | | | +--Clostridium sulfidigenes (2) | | | | | | | | | | | +--Clostridium novyi NT (2) | | | | | | | | | | | +--Clostridium sp. ASF502 (1) | | | | | | | | | | | +--Clostridium botulinum D str. 1873 (2) | | | | | | | | | | | +--Clostridium cf. saccharolyticum K10 (1) | | | | | | | | | | | +--Clostridium botulinum B str. Eklund 17B (1) | | | | | | | | | | | +--Clostridium estertheticum subsp. estertheticum (1) | | | | | | | | | | | +--Clostridium asparagiforme DSM 15981 (1) | | | | | | | | | | | +--Clostridium acetobutylicum ATCC 824 (3) | | | | | | | | | | | +--Clostridium chromoreductans (3) | | | | | | | | | | | +--Clostridium kluyveri DSM 555 (2) | | | | | | | | | | | +--Clostridium hungatei (1) | | | | | | | | | | | +--Clostridium taeniosporum (1) | | | | | | | | | | | +--Clostridium butyricum E4 str. BoNT E BL5262 (1) | | | | | | | | | | | +--Clostridium cadaveris (1) | | | | | | | | | | | +--Clostridium sp. DL-VIII (2) | | | | | | | | | | | +--Clostridium paraputrificum (1) | | | | | | | | | | | +--Clostridium puniceum (1) | | | | | | | | | | | +--Clostridium sp. MSTE9 (1) | | | | | | | | | | | +--Caloramator australicus RC3 (1) | | | | | | | | | | | +--Alkaliphilus oremlandii OhILAs (2) | | | | | | | | | | | +--Clostridium sp. SY8519 (1) | | | | | | | | | | | +--Clostridium halophilum (2) | | | | | | | | | | | +--Clostridium thermocellum ATCC 27405 (1) | | | | | | | | | | | +--Alkaliphilus metalliredigens QYMF (2) | | | | | | | | | | | +--Clostridium celerecrescens (1) | | | | | | | | | | | +--Clostridium difficile (1) | | | | | | | | | | | +--Clostridium sp. ASF356 (1) | | | | | | | | | | | +--Clostridium hylemonae DSM 15053 (1) | | | | | | | | | | | +--Clostridium symbiosum WAL-14163 (1) | | | | | | | | | | | +--Clostridium neopropionicum (1) | | | | | | | | | | | +--Clostridium botulinum A str. ATCC 3502 (1) | | | | | | | | | | | +--Caloramator mitchellensis (2) | | | | | | | | | +--Christensenellaceae (1) | | | | | | | | | | | +--Christensenella minuta (1) | | | | | | | | | +--Lachnospiraceae bacterium 3-1 (1) | | | | | | | | | +--Syntrophomonadaceae (3) | | | | | | | | | | | +--Syntrophothermus lipocalidus DSM 12680 (1) | | | | | | | | | | | +--Dethiobacter alkaliphilus AHT 1 (1) | | | | | | | | | | | +--Syntrophomonas wolfei subsp. wolfei str. Goettingen (1) | | | | | | | | | +--Pseudoflavonifractor capillosus ATCC 29799 (1) | | | | | | | | | +--Lachnospiraceae bacterium 2_1_46FAA (1) | | | | | | | | | +--Peptococcaceae (24) | | | | | | | | | | | +--Desulfosporosinus meridiei DSM 13257 (1) | | | | | | | | | | | +--Thermincola potens JR (1) | | | | | | | | | | | +--Desulfitobacterium (1) | | | | | | | | | | | | | +--Desulfitobacterium sp. enrichment culture clone CEB3 (1) | | | | | | | | | | | +--Desulfotomaculum kuznetsovii DSM 6115 (1) | | | | | | | | | | | +--Syntrophobotulus glycolicus DSM 8271 (1) | | | | | | | | | | | +--Desulfosporosinus acidiphilus SJ4 (2) | | | | | | | | | | | +--Desulfosporosinus orientis DSM 765 (1) | | | | | | | | | | | +--Desulfitobacterium hafniense Y51 (1) | | | | | | | | | | | +--Candidatus Desulforudis audaxviator MP104C (1) | | | | | | | | | | | +--Desulfotomaculum reducens MI-1 (2) | | | | | | | | | | | +--Desulfotomaculum acetoxidans DSM 771 (2) | | | | | | | | | | | +--Desulfitobacterium metallireducens DSM 15288 (1) | | | | | | | | | | | +--Desulfosporosinus sp. OT (1) | | | | | | | | | | | +--Desulfotomaculum carboxydivorans CO-1-SRB (2) | | | | | | | | | | | +--Pelotomaculum thermopropionicum SI (1) | | | | | | | | | | | +--Desulfotomaculum ruminis DSM 2154 (2) | | | | | | | | | | | +--Desulfotomaculum gibsoniae DSM 7213 (2) | | | | | | | | | | | +--Desulfosporosinus youngiae DSM 17734 (1) | | | | | | | | | +--ClostridialesFamilyXVII.IncertaeSedis (3) | | | | | | | | | | | +--Sulfobacillus thermosulfidooxidans (1) | | | | | | | | | | | +--Sulfobacillus acidophilus TPY (1) | | | | | | | | | | | +--Thermaerobacter marianensis DSM 12885 (1) | | | | | | | | | +--Catabacteriaceae (1) | | | | | | | | | | | +--Catabacter hongkongensis (1) | | | | | | | | | +--Lachnospiraceae bacterium A4 (1) | | | | | | | | | +--Lachnospiraceae bacterium 5_1_57FAA (1) | | | | | | | | | +--Lachnospiraceae bacterium 28-4 (1) | | | | | | | +--Thermoanaerobacterales (17) | | | | | | | | | +--Thermodesulfobiaceae (1) | | | | | | | | | | | +--Coprothermobacter proteolyticus DSM 5265 (1) | | | | | | | | | +--ThermoanaerobacteralesFamilyIV.IncertaeSedis (1) | | | | | | | | | | | +--Mahella australiensis 50-1 BON (1) | | | | | | | | | +--ThermoanaerobacteralesFamilyIII.IncertaeSedis (5) | | | | | | | | | | | +--Thermovenabulum sp. R270 (1) | | | | | | | | | | | +--Syntrophaceticus schinkii (1) | | | | | | | | | | | +--Caldicellulosiruptor saccharolyticus DSM 8903 (1) | | | | | | | | | | | +--Caldicellulosiruptor owensensis OL (1) | | | | | | | | | | | +--Thermosediminibacter oceani DSM 16646 (1) | | | | | | | | | +--Thermoanaerobacteraceae (10) | | | | | | | | | +--Thermoanaerobacter tengcongensis MB4 (2) | | | | | | | | | +--Moorellagroup (3) | | | | | | | | | | | +--Ammonifex degensii KC4 (1) | | | | | | | | | | | +--Moorella glycerini (1) | | | | | | | | | | | +--Moorella thermoacetica ATCC 39073 (1) | | | | | | | | | +--Tepidanaerobacter syntrophicus (1) | | | | | | | | | +--Carboxydothermus hydrogenoformans Z-2901 (1) | | | | | | | | | +--Fervidicola ferrireducens (1) | | | | | | | | | +--Thermoanaerobacter pseudethanolicus ATCC 33223 (2) | | | | | | | +--butyrate-producing bacterium SS3/4 (1) | | | | | | | +--Clostridiales bacterium 1_7_47FAA (1) | | | | | | | +--Halanaerobiales (6) | | | | | | | +--Halobacteroidaceae (2) | | | | | | | | | +--Selenihalanaerobacter shriftii (1) | | | | | | | | | +--Acetohalobium arabaticum DSM 5501 (1) | | | | | | | +--Halanaerobiaceae (4) | | | | | | | +--Halothermothrix orenii H 168 (1) | | | | | | | +--Halanaerobium hydrogeniformans (1) | | | | | | | +--Halanaerobium kushneri (1) | | | | | | | +--Halanaerobium praevalens DSM 2228 (1) | | | | | +--Lactobacillales (58) | | | | | | | +--Carnobacteriaceae (5) | | | | | | | | | +--Trichococcus sp. EX-07 (1) | | | | | | | | | +--Carnobacterium sp. LMG 26642 (1) | | | | | | | | | +--Granulicatella elegans ATCC 700633 (1) | | | | | | | | | +--Granulicatella adiacens ATCC 49175 (1) | | | | | | | | | +--Trichococcus sp. R210 (1) | | | | | | | +--Streptococcaceae (20) | | | | | | | | | +--Streptococcus henryi (1) | | | | | | | | | +--Streptococcus parauberis NCFD 2020 (1) | | | | | | | | | +--Streptococcus phocae (1) | | | | | | | | | +--Streptococcus thermophilus LMG 18311 (1) | | | | | | | | | +--Streptococcus ictaluri 707-05 (1) | | | | | | | | | +--Lactococcus lactis subsp. lactis Il1403 (1) | | | | | | | | | +--Streptococcus uberis 0140J (1) | | | | | | | | | +--Streptococcus urinalis 2285-97 (1) | | | | | | | | | +--Streptococcus gallolyticus (1) | | | | | | | | | +--Streptococcus equi subsp. zooepidemicus (1) | | | | | | | | | +--Lactococcus garvieae Lg2 (1) | | | | | | | | | +--Streptococcus mutans UA159 (1) | | | | | | | | | +--Streptococcus infantis SK970 (1) | | | | | | | | | +--Streptococcus macacae NCTC 11558 (1) | | | | | | | | | +--Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 (1) | | | | | | | | | +--Lactococcus sp. MKFS47 (1) | | | | | | | | | +--Streptococcus sinensis (1) | | | | | | | | | +--Streptococcus suis 05ZYH33 (1) | | | | | | | | | +--Streptococcus pseudoporcinus LQ 940-04 (1) | | | | | | | | | +--Streptococcus uberis (1) | | | | | | | +--Enterococcaceae (19) | | | | | | | | | +--Pilibacter termitis (1) | | | | | | | | | +--Enterococcus ratti (1) | | | | | | | | | +--Enterococcus aquimarinus (1) | | | | | | | | | +--Enterococcus italicus DSM 15952 (1) | | | | | | | | | +--Enterococcus faecalis V583 (1) | | | | | | | | | +--Enterococcus sp. CCM4360 (1) | | | | | | | | | +--Tetragenococcus halophilus NBRC 12172 (1) | | | | | | | | | +--Enterococcus devriesei (1) | | | | | | | | | +--Vagococcus penaei (1) | | | | | | | | | +--Melissococcus plutonius ATCC 35311 (1) | | | | | | | | | +--Enterococcus faecium DO (1) | | | | | | | | | +--Enterococcus sp. HAMBI 3055 (1) | | | | | | | | | +--Enterococcus casseliflavus EC20 (1) | | | | | | | | | +--Enterococcus canis (1) | | | | | | | | | +--Enterococcus hermanniensis (1) | | | | | | | | | +--Enterococcus thailandicus (1) | | | | | | | | | +--Enterococcus termitis (1) | | | | | | | | | +--Enterococcus hirae ATCC 9790 (1) | | | | | | | | | +--Vagococcus teuberi (1) | | | | | | | +--Lactobacillaceae (7) | | | | | | | | | +--Lactobacillus sp. 1.1424 (1) | | | | | | | | | +--Lactobacillus plantarum WCFS1 (1) | | | | | | | | | +--Lactobacillus backi (1) | | | | | | | | | +--Pediococcus cellicola (1) | | | | | | | | | +--Lactobacillus salivarius UCC118 (1) | | | | | | | | | +--Pediococcus acidilactici DSM 20284 (1) | | | | | | | | | +--Lactobacillus fermentum CECT 5716 (1) | | | | | | | +--Aerococcaceae (7) | | | | | | | +--Aerococcus urinaehominis (1) | | | | | | | +--Aerococcus viridans ATCC 11563 (1) | | | | | | | +--Aerococcus urinae ACS-120-V-Col10a (1) | | | | | | | +--Aerococcus sanguinicola (1) | | | | | | | +--Eremococcus coleocola ACS-139-V-Col8 (1) | | | | | | | +--Abiotrophia defectiva ATCC 49176 (1) | | | | | | | +--Aerococcus christensenii (1) | | | | | +--Negativicutes (32) | | | | | | | +--Selenomonadales (32) | | | | | | | +--Acidaminococcaceae (3) | | | | | | | | | +--Acidaminococcus fermentans DSM 20731 (1) | | | | | | | | | +--Acidaminococcus intestini RyC-MR95 (1) | | | | | | | | | +--Phascolarctobacterium sp. YIT 12067 (1) | | | | | | | +--Veillonellaceae (29) | | | | | | | +--Megasphaera sp. DJF_B143 (1) | | | | | | | +--Thermosinus carboxydivorans Nor1 (2) | | | | | | | +--Megasphaera elsdenii DSM 20460 (1) | | | | | | | +--Veillonella sp. oral taxon 780 str. F0422 (1) | | | | | | | +--Megasphaera genomosp. type_1 str. 28L (1) | | | | | | | +--Acetonema longum DSM 6540 (2) | | | | | | | +--Selenomonas ruminantium (1) | | | | | | | +--Pelosinus sp. UFO1 (4) | | | | | | | +--Selenomonas sputigena ATCC 35185 (1) | | | | | | | +--Sporomusa sp. An4 (4) | | | | | | | +--Megamonas hypermegale ART12/1 (1) | | | | | | | +--Sporomusa malonica (3) | | | | | | | +--Megasphaera sp. UPII 135-E (1) | | | | | | | +--Dialister micraerophilus DSM 19965 (1) | | | | | | | +--Mitsuokella multacida DSM 20544 (1) | | | | | | | +--Megasphaera sp. BV3C16-1 (1) | | | | | | | +--Veillonella parvula DSM 2008 (1) | | | | | | | +--Megasphaera micronuciformis F0359 (1) | | | | | | | +--Selenomonas noxia ATCC 43541 (1) | | | | | +--Bacillales (223) | | | | | | | +--Staphylococcus carnosus subsp. carnosus TM300 (1) | | | | | | | +--Staphylococcus pseudintermedius (1) | | | | | | | +--Alicyclobacillaceae (4) | | | | | | | | | +--Alicyclobacillus macrosporangiidus (1) | | | | | | | | | +--Alicyclobacillus ferrooxydans (2) | | | | | | | | | +--Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 (1) | | | | | | | +--Staphylococcus saprophyticus (1) | | | | | | | +--Sporolactobacillaceae (1) | | | | | | | | | +--Sporolactobacillus inulinus CASD (1) | | | | | | | +--Staphylococcus cohnii subsp. cohnii (1) | | | | | | | +--Staphylococcus simiae CCM 7213 (1) | | | | | | | +--Bacillus tusciae DSM 2912 (1) | | | | | | | +--BacillalesFamilyXII.IncertaeSedis (2) | | | | | | | | | +--Exiguobacterium sp. AT1b (1) | | | | | | | | | +--Exiguobacterium sibiricum 255-15 (1) | | | | | | | +--Staphylococcus capitis (1) | | | | | | | +--Planococcaceae (17) | | | | | | | | | +--Planococcus rifietoensis (1) | | | | | | | | | +--'Jeotgalibacillus soli' Cunha et al. 2011 (2) | | | | | | | | | +--Planomicrobium glaciei (1) | | | | | | | | | +--Jeotgalibacillus campisalis (2) | | | | | | | | | +--Sporosarcina newyorkensis 2681 (2) | | | | | | | | | +--Caryophanon tenue (2) | | | | | | | | | +--Solibacillus silvestris StLB046 (2) | | | | | | | | | +--Rummeliibacillus stabekisii (3) | | | | | | | | | +--Sporosarcina psychrophila (2) | | | | | | | +--Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 (1) | | | | | | | +--Staphylococcus succinus (1) | | | | | | | +--Staphylococcus epidermidis RP62A (1) | | | | | | | +--Listeriaceae (2) | | | | | | | | | +--Listeria grayi DSM 20601 (1) | | | | | | | | | +--Listeria monocytogenes EGD-e (1) | | | | | | | +--Macrococcus caseolyticus JCSC5402 (1) | | | | | | | +--BacillalesFamilyXI.IncertaeSedis (2) | | | | | | | | | +--Gemella haemolysans ATCC 10379 (1) | | | | | | | | | +--Gemella sp. WAL 1945J (1) | | | | | | | +--Salinicoccus halodurans (1) | | | | | | | +--Paenibacillaceae (29) | | | | | | | | | +--Brevibacillus sp. WF146 (2) | | | | | | | | | +--Paenibacillus naphthalenovorans (1) | | | | | | | | | +--Paenibacillus stellifer (1) | | | | | | | | | +--Paenibacillus riograndensis SBR5 (1) | | | | | | | | | +--Paenibacillus macerans (1) | | | | | | | | | +--Brevibacillus brevis NBRC 100599 (2) | | | | | | | | | +--Paenibacillus rhizosphaerae (1) | | | | | | | | | +--Paenibacillus sp. D9 (1) | | | | | | | | | +--Paenibacillus sp. HGF7 (1) | | | | | | | | | +--Paenibacillus sp. Y412MC10 (1) | | | | | | | | | +--Brevibacillus laterosporus LMG 15441 (1) | | | | | | | | | +--Brevibacillus parabrevis (2) | | | | | | | | | +--Paenibacillus curdlanolyticus YK9 (1) | | | | | | | | | +--Paenibacillus sp. oral taxon 786 str. D14 (1) | | | | | | | | | +--Paenibacillus wynnii (1) | | | | | | | | | +--Paenibacillus polymyxa SC2 (1) | | | | | | | | | +--Thermobacillus composti KWC4 (1) | | | | | | | | | +--Brevibacillus choshinensis (2) | | | | | | | | | +--Paenibacillus sp. MY03 (1) | | | | | | | | | +--Paenibacillus antarcticus (1) | | | | | | | | | +--Paenibacillus pectinilyticus (1) | | | | | | | | | +--Paenibacillus sp. JDR-2 (1) | | | | | | | | | +--Paenibacillus sp. IHB B 3415 (1) | | | | | | | | | +--Aneurinibacillusgroup (2) | | | | | | | | | +--Aneurinibacillus migulanus (2) | | | | | | | +--Bacillaceae (147) | | | | | | | | | +--Oceanobacillus iheyensis HTE831 (2) | | | | | | | | | +--Bacillus sp. NIOC03 (2) | | | | | | | | | +--Bacillus pseudalcaliphilus (2) | | | | | | | | | +--Virgibacillus pantothenticus (2) | | | | | | | | | +--Bacillus niacini (1) | | | | | | | | | +--Bacillus sporothermodurans (2) | | | | | | | | | +--Bacillus thermozeamaize (1) | | | | | | | | | +--Bacillus coagulans 36D1 (2) | | | | | | | | | +--Bacillus galactosidilyticus (2) | | | | | | | | | +--Bacillus atrophaeus 1942 (2) | | | | | | | | | +--Bacillus pseudofirmus OF4 (2) | | | | | | | | | +--Bacillus macroides (2) | | | | | | | | | +--Bacillus thermoamylovorans (2) | | | | | | | | | +--Virgibacillus sp. CC-YMP-6 (2) | | | | | | | | | +--Bacillus methanolicus MGA3 (2) | | | | | | | | | +--Bacillus beveridgei (2) | | | | | | | | | +--Bacillus litoralis (2) | | | | | | | | | +--Bacillus indicus (2) | | | | | | | | | +--Virgibacillus chiguensis (2) | | | | | | | | | +--Bacillus koreensis (2) | | | | | | | | | +--Aeribacillus pallidus (1) | | | | | | | | | +--Bacillus subterraneus (1) | | | | | | | | | +--Gracilibacillus sp. K170 (1) | | | | | | | | | +--Bacillus megaterium QM B1551 (3) | | | | | | | | | +--Caldalkalibacillus thermarum TA2.A1 (1) | | | | | | | | | +--Bacillus sp. MNA4 (2) | | | | | | | | | +--Bacillus sp. BL4-6 (2) | | | | | | | | | +--Bacillus ginsengihumi (2) | | | | | | | | | +--Bacillus amyloliquefaciens FZB42 (1) | | | | | | | | | +--Bacillus okhensis (1) | | | | | | | | | +--Bacillus macyae (2) | | | | | | | | | +--Bacillus badius (2) | | | | | | | | | +--Bacillus marisflavi (2) | | | | | | | | | +--Virgibacillus sp. SK37 (2) | | | | | | | | | +--Bacillus halodurans C-125 (2) | | | | | | | | | +--Bacillus selenitireducens MLS10 (2) | | | | | | | | | +--Geobacillus debilis (1) | | | | | | | | | +--Halobacillus mangrovi (1) | | | | | | | | | +--Bacillus sp. 2_A_57_CT2 (3) | | | | | | | | | +--Bacillus pumilus SAFR-032 (2) | | | | | | | | | +--Virgibacillus necropolis (2) | | | | | | | | | +--Geobacillus kaustophilus HTA426 (2) | | | | | | | | | +--Bacillus shackletonii (2) | | | | | | | | | +--Bacillus krulwichiae (2) | | | | | | | | | +--Sediminibacillus halophilus (2) | | | | | | | | | +--Bacillus arseniciselenatis (2) | | | | | | | | | +--Geobacillus sp. WCH70 (2) | | | | | | | | | +--Bacillus licheniformis ATCC 14580 (2) | | | | | | | | | +--Bacillus sp. 1NLA3E (2) | | | | | | | | | +--Bacillus vietnamensis (3) | | | | | | | | | +--Halobacillus karajensis (1) | | | | | | | | | +--Bacillus smithii (1) | | | | | | | | | +--Oceanobacillus oncorhynchi (2) | | | | | | | | | +--Bacillus arsenicus (2) | | | | | | | | | +--Bacillus subtilis subsp. subtilis str. 168 (2) | | | | | | | | | +--Anaerobacillus alkalilacustre (2) | | | | | | | | | +--Bacillus clausii KSM-K16 (2) | | | | | | | | | +--Bacillus endophyticus (1) | | | | | | | | | +--Salimicrobium sp. ISL-25 (1) | | | | | | | | | +--Geobacillus sp. Y4.1MC1 (2) | | | | | | | | | +--Bacillus sp. SG-1 (2) | | | | | | | | | +--Lysinibacillus xylanilyticus (2) | | | | | | | | | +--Bacillus cellulosilyticus DSM 2522 (3) | | | | | | | | | +--Bacillus circulans (1) | | | | | | | | | +--Halobacillus halophilus DSM 2266 (1) | | | | | | | | | +--Geobacillus thermodenitrificans NG80-2 (2) | | | | | | | | | +--Bacillus aminovorans (2) | | | | | | | | | +--Ornithinibacillus sp. G8B(2010) (2) | | | | | | | | | +--Oceanobacillus picturae (2) | | | | | | | | | +--Bacillus sp. NIOC16 (2) | | | | | | | | | +--Bacillus (12) | | | | | | | | | | | +--Bacillus cereus Rock4-18 (2) | | | | | | | | | | | +--Bacillus cytotoxicus NVH 391-98 (2) | | | | | | | | | | | +--Bacillus cereus ATCC 14579 (2) | | | | | | | | | | | +--Bacillus cereus Rock3-44 (2) | | | | | | | | | | | +--Bacillus gaemokensis (2) | | | | | | | | | | | +--Bacillus anthracis str. 'Ames Ancestor' (2) | | | | | | | | | +--Anoxybacillus flavithermus (1) | | | | | | | | | +--Anoxybacillus amylolyticus (2) | | | | | | | | | +--Anoxybacillus flavithermus WK1 (1) | | | | | | | | | +--Terribacillus aidingensis (1) | | | | | | | | | +--Bacillus sp. OxB-1 (2) | | | | | | | +--Staphylococcus hyicus (1) | | | | | | | +--Staphylococcus haemolyticus JCSC1435 (1) | | | | | | | +--Thermoactinomycetaceae (3) | | | | | | | | | +--Thermoactinomyces vulgaris (1) | | | | | | | | | +--Seinonella peptonophila (1) | | | | | | | | | +--Desmospora sp. 8437 (1) | | | | | | | +--Staphylococcus aureus subsp. aureus NCTC 8325 (1) | | | | | | | +--Staphylococcus microti (1) | | | | | +--Erysipelotrichi (4) | | | | | +--Erysipelotrichales (4) | | | | | +--Erysipelotrichaceae (4) | | | | | +--Coprobacillus sp. 29_1 (1) | | | | | +--Turicibacter sanguinis PC909 (2) | | | | | +--Erysipelothrix rhusiopathiae str. Fujisawa (1) | | | +--Chloroflexi (11) | | | | | +--Sphaerobacteridae (1) | | | | | | | +--Sphaerobacterales (1) | | | | | | | +--Sphaerobacterineae (1) | | | | | | | +--Sphaerobacteraceae (1) | | | | | | | +--Sphaerobacter thermophilus DSM 20745 (1) | | | | | +--Chloroflexales (2) | | | | | | | +--Chloroflexaceae (1) | | | | | | | | | +--Roseiflexus sp. RS-1 (1) | | | | | | | +--Oscillochloridaceae (1) | | | | | | | +--Oscillochloris trichoides DG-6 (1) | | | | | +--Herpetosiphonales (1) | | | | | | | +--Herpetosiphonaceae (1) | | | | | | | +--Herpetosiphon aurantiacus DSM 785 (1) | | | | | +--Kouleothrix aurantiaca (1) | | | | | +--Anaerolineae (6) | | | | | +--Anaerolineales (6) | | | | | +--Anaerolineaceae (6) | | | | | +--Thermanaerothrix daxensis (1) | | | | | +--Bellilinea caldifistulae (1) | | | | | +--Longilinea arvoryzae (1) | | | | | +--Leptolinea tardivitalis (1) | | | | | +--Levilinea saccharolytica (1) | | | | | +--Anaerolinea thermophila UNI-1 (1) | | | +--Thermodesulfobacteria (2) | | | | | +--Thermodesulfobacteriales (2) | | | | | +--Thermodesulfobacteriaceae bacterium S95 (1) | | | | | +--Thermodesulfobacteriaceae (1) | | | | | +--Thermodesulfatator indicus DSM 15286 (1) | | | +--Verrucomicrobia (8) | | | | | +--Spartobacteria bacterium NM5 (1) | | | | | +--Opitutae (3) | | | | | | | +--Puniceicoccales (1) | | | | | | | | | +--Puniceicoccaceae (1) | | | | | | | | | +--Coraliomargarita akajimensis DSM 45221 (1) | | | | | | | +--Opitutales (2) | | | | | | | +--Opitutaceae bacterium TAV4 (1) | | | | | | | +--Opitutaceae (1) | | | | | | | +--Opitutus terrae PB90-1 (1) | | | | | +--Spartobacteria (1) | | | | | | | +--Chthoniobacter flavus Ellin428 (1) | | | | | +--Verrucomicrobiae (3) | | | | | +--Verrucomicrobiae bacterium DG1235 (1) | | | | | +--Verrucomicrobiales (2) | | | | | +--Verrucomicrobiaceae (1) | | | | | | | +--Prosthecobacter debontii (1) | | | | | +--Verrucomicrobiasubdivision3 (1) | | | | | +--Pedosphaera parvula Ellin514 (1) | | | +--Terrabacteriagroup (931) | | | | | +--Tenericutes (6) | | | | | | | +--Mollicutes (6) | | | | | | | +--Mycoplasmatales (5) | | | | | | | | | +--Mycoplasmataceae (5) | | | | | | | | | +--Mycoplasma (5) | | | | | | | | | +--Mycoplasma sp. CAG:472 (1) | | | | | | | | | +--Mycoplasma sp. CAG:956 (1) | | | | | | | | | +--Mycoplasma sp. CAG:611 (1) | | | | | | | | | +--Mycoplasma sp. CAG:776 (1) | | | | | | | | | +--Mycoplasma sp. CAG:877 (1) | | | | | | | +--Acholeplasmatales (1) | | | | | | | +--Acholeplasmataceae (1) | | | | | | | +--Acholeplasma (1) | | | | | | | +--Acholeplasma sp. CAG:878 (1) | | | | | +--Actinobacteria (21) | | | | | | | +--Actinobacteria bacterium 13_1_20CM_3_68_9 (1) | | | | | | | +--Actinobacteria (6) | | | | | | | | | +--Streptomycetales (1) | | | | | | | | | | | +--Streptomycetaceae (1) | | | | | | | | | | | +--Streptomyces sp. WAC00263 (1) | | | | | | | | | +--Propionibacteriales (2) | | | | | | | | | | | +--Nocardioidaceae (2) | | | | | | | | | | | +--Mumia flava (2) | | | | | | | | | +--unclassifiedActinobacteria(class) (1) | | | | | | | | | | | +--Actinobacteria bacterium 66_15 (1) | | | | | | | | | +--Corynebacteriales (1) | | | | | | | | | | | +--Mycobacteriaceae (1) | | | | | | | | | | | +--Mycobacterium (1) | | | | | | | | | | | +--Mycobacteriumchelonaegroup (1) | | | | | | | | | | | +--Mycobacteriumabscessussubgroup (1) | | | | | | | | | | | +--Mycobacterium abscessus subsp. abscessus (1) | | | | | | | | | +--Micrococcales (1) | | | | | | | | | +--Microbacteriaceae (1) | | | | | | | | | +--Microbacterium sp. SUBG005 (1) | | | | | | | +--Actinobacteria bacterium RBG_13_63_9 (1) | | | | | | | +--Actinobacteria bacterium 13_2_20CM_68_14 (1) | | | | | | | +--Actinobacteria bacterium RBG_13_55_18 (1) | | | | | | | +--Actinobacteria bacterium GWC2_53_9 (1) | | | | | | | +--Actinobacteria bacterium 13_1_20CM_3_68_10 (1) | | | | | | | +--Coriobacteriia (3) | | | | | | | | | +--Eggerthellales (1) | | | | | | | | | | | +--Eggerthellaceae (1) | | | | | | | | | | | +--Eggerthella (1) | | | | | | | | | | | +--Eggerthella sp. CAG:368 (1) | | | | | | | | | +--Coriobacteriales (2) | | | | | | | | | +--Coriobacteriaceae (1) | | | | | | | | | | | +--Coriobacteriaceae bacterium EMTCatB1 (1) | | | | | | | | | +--Atopobiaceae (1) | | | | | | | | | +--Olsenella scatoligenes (1) | | | | | | | +--Thermoleophilia (2) | | | | | | | | | +--Solirubrobacterales (2) | | | | | | | | | +--Solirubrobacterales bacterium 70-9 (1) | | | | | | | | | +--Solirubrobacterales bacterium 67-14 (1) | | | | | | | +--Actinobacteria bacterium RBG_13_35_12 (1) | | | | | | | +--Actinobacteria bacterium CG2_30_50_142 (1) | | | | | | | +--Actinobacteria bacterium RBG_16_64_13 (1) | | | | | | | +--Actinobacteria bacterium 13_1_20CM_4_68_12 (1) | | | | | +--Armatimonadetes (5) | | | | | | | +--Armatimonadetes bacterium RBG_16_67_12 (1) | | | | | | | +--Armatimonadetes bacterium RBG_19FT_COMBO_69_19 (1) | | | | | | | +--Armatimonadetes bacterium 13_1_40CM_64_14 (1) | | | | | | | +--Armatimonadetes bacterium CG2_30_66_41 (1) | | | | | | | +--Armatimonadetes bacterium CG2_30_59_28 (1) | | | | | +--Cyanobacteria/Melainabacteriagroup (62) | | | | | | | +--CandidatusMelainabacteria (2) | | | | | | | | | +--Candidatus Melainabacteria bacterium RIFOXYA2_FULL_32_9 (1) | | | | | | | | | +--Candidatus Melainabacteria bacterium GWA2_34_9 (1) | | | | | | | +--Cyanobacteria (60) | | | | | | | +--unclassifiedCyanobacteria (2) | | | | | | | | | +--unclassifiedCyanobacteria(miscellaneous) (1) | | | | | | | | | | | +--cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko (1) | | | | | | | | | +--cyanobacterium BACL30 MAG-120619-bin27 (1) | | | | | | | +--Gloeoemargaritales (1) | | | | | | | | | +--Gloeomargaritaceae (1) | | | | | | | | | +--Gloeomargarita (1) | | | | | | | | | +--Gloeomargarita lithophora Alchichica-D10 (1) | | | | | | | +--Gloeobacteria (1) | | | | | | | | | +--Gloeobacterales (1) | | | | | | | | | +--Gloeobacteraceae (1) | | | | | | | | | +--Gloeobacter (1) | | | | | | | | | +--Gloeobacter kilaueensis JS1 (1) | | | | | | | +--Chroococcidiopsidales (1) | | | | | | | | | +--Chroococcidiopsidaceae (1) | | | | | | | | | +--Aliterella (1) | | | | | | | | | +--Aliterella atlantica CENA595 (1) | | | | | | | +--Synechococcales (19) | | | | | | | | | +--Chamaesiphonaceae (1) | | | | | | | | | | | +--Chamaesiphon (1) | | | | | | | | | | | +--Chamaesiphon minutus PCC 6605 (1) | | | | | | | | | +--Leptolyngbyaceae (6) | | | | | | | | | | | +--Halomicronema (1) | | | | | | | | | | | | | +--Halomicronema hongdechloris C2206 (1) | | | | | | | | | | | +--Neosynechococcus (1) | | | | | | | | | | | | | +--Neosynechococcus sphagnicola sy1 (1) | | | | | | | | | | | +--Phormidesmis (1) | | | | | | | | | | | | | +--Phormidesmis priestleyi Ana (1) | | | | | | | | | | | +--Leptolyngbya sp. 'hensonii' (1) | | | | | | | | | | | +--Leptolyngbya sp. Heron Island J (1) | | | | | | | | | | | +--Leptolyngbya sp. NIES-2104 (1) | | | | | | | | | +--Synechococcaceae (10) | | | | | | | | | | | +--Synechococcus sp. PCC 7502 (1) | | | | | | | | | | | +--Synechococcus sp. Tous (1) | | | | | | | | | | | +--Synechococcus sp. MIT S9508 (1) | | | | | | | | | | | +--Synechococcus sp. KORDI-100 (1) | | | | | | | | | | | +--Synechococcus sp. GFB01 (1) | | | | | | | | | | | +--Synechococcus (3) | | | | | | | | | | | | | +--Candidatus Synechococcus spongiarum 142 (1) | | | | | | | | | | | | | +--Candidatus Synechococcus spongiarum SP3 (1) | | | | | | | | | | | | | +--Candidatus Synechococcus spongiarum 15L (1) | | | | | | | | | | | +--Synechococcus sp. SynAce01 (1) | | | | | | | | | | | +--Cyanobium (1) | | | | | | | | | | | +--Cyanobium gracile PCC 6307 (1) | | | | | | | | | +--Pseudanabaenaceae (2) | | | | | | | | | +--Limnothrix sp. P13C2 (1) | | | | | | | | | +--Pseudanabaena (1) | | | | | | | | | +--Pseudanabaena biceps PCC 7429 (1) | | | | | | | +--Nostocales (18) | | | | | | | | | +--Nostocaceae (6) | | | | | | | | | | | +--Nostoc sp. NIES-3756 (1) | | | | | | | | | | | +--Anabaena sp. CRKS33 (1) | | | | | | | | | | | +--Nostoc (1) | | | | | | | | | | | | | +--Nostoc calcicola FACHB-389 (1) | | | | | | | | | | | +--Nostoc sp. PCC 7107 (1) | | | | | | | | | | | +--Richelia (2) | | | | | | | | | | | +--Richelia intracellularis HH01 (1) | | | | | | | | | | | +--Richelia intracellularis HM01 (1) | | | | | | | | | +--Hapalosiphonaceae (2) | | | | | | | | | | | +--Hapalosiphon sp. MRB220 (1) | | | | | | | | | | | +--Mastigocladus (1) | | | | | | | | | | | +--Mastigocladus laminosus UU774 (1) | | | | | | | | | +--Aphanizomenonaceae (2) | | | | | | | | | | | +--Aphanizomenon (2) | | | | | | | | | | | +--Aphanizomenon flos-aquae 2012/KM1/D3 (1) | | | | | | | | | | | +--Aphanizomenon flos-aquae LD13 (1) | | | | | | | | | +--Scytonemataceae (2) | | | | | | | | | | | +--Scytonema (2) | | | | | | | | | | | +--Scytonema millei VB511283 (1) | | | | | | | | | | | +--Scytonema tolypothrichoides VB-61278 (1) | | | | | | | | | +--Tolypothrichaceae (3) | | | | | | | | | | | +--Hassallia (1) | | | | | | | | | | | | | +--Hassallia byssoidea VB512170 (1) | | | | | | | | | | | +--Tolypothrix (2) | | | | | | | | | | | +--Tolypothrix campylonemoides VB511288 (1) | | | | | | | | | | | +--Tolypothrix bouteillei VB521301 (1) | | | | | | | | | +--Rivulariaceae (3) | | | | | | | | | +--Calothrix sp. HK-06 (1) | | | | | | | | | +--Calothrix (1) | | | | | | | | | | | +--Calothrix sp. PCC 6303 (1) | | | | | | | | | +--Calothrix sp. 336/3 (1) | | | | | | | +--Oscillatoriophycideae (18) | | | | | | | +--Oscillatoriales (13) | | | | | | | | | +--Oscillatoriaceae (4) | | | | | | | | | | | +--Phormidium (1) | | | | | | | | | | | | | +--Phormidium tenue NIES-30 (1) | | | | | | | | | | | +--Lyngbya (1) | | | | | | | | | | | | | +--Lyngbya confervoides BDU141951 (1) | | | | | | | | | | | +--Limnoraphis (2) | | | | | | | | | | | +--Limnoraphis robusta CS-951 (2) | | | | | | | | | +--Coleofasciculaceae (2) | | | | | | | | | | | +--Geitlerinema sp. PCC 7407 (1) | | | | | | | | | | | +--Roseofilum (1) | | | | | | | | | | | +--Roseofilum reptotaenium AO1-A (1) | | | | | | | | | +--Gomontiellaceae (1) | | | | | | | | | | | +--Crinalium (1) | | | | | | | | | | | +--Crinalium epipsammum PCC 9333 (1) | | | | | | | | | +--Microcoleaceae (3) | | | | | | | | | | | +--Arthrospira (1) | | | | | | | | | | | | | +--Arthrospira platensis NIES-39 (1) | | | | | | | | | | | +--Microcoleus sp. PCC 7113 (1) | | | | | | | | | | | +--Planktothricoides sp. SR001 (1) | | | | | | | | | +--Desertifilaceae (1) | | | | | | | | | | | +--Desertifilum sp. IPPAS B-1220 (1) | | | | | | | | | +--unclassifiedOscillatoriales (2) | | | | | | | | | +--Oscillatoriales cyanobacterium USR001 (1) | | | | | | | | | +--Oscillatoriales cyanobacterium CG2_30_44_21 (1) | | | | | | | +--Chroococcales (5) | | | | | | | +--Cyanobacteriaceae (1) | | | | | | | | | +--Cyanobacterium (1) | | | | | | | | | +--Cyanobacterium aponinum PCC 10605 (1) | | | | | | | +--Aphanothecaceae (1) | | | | | | | | | +--CandidatusAtelocyanobacterium (1) | | | | | | | | | +--Candidatus Atelocyanobacterium thalassa isolate ALOHA (1) | | | | | | | +--Chroococcaceae (3) | | | | | | | +--Gloeocapsa sp. PCC 7428 (1) | | | | | | | +--Geminocystis sp. NIES-3708 (1) | | | | | | | +--Geminocystis sp. NIES-3709 (1) | | | | | +--Chloroflexi (41) | | | | | | | +--Caldilineae (1) | | | | | | | | | +--Caldilineales (1) | | | | | | | | | +--Caldilineaceae (1) | | | | | | | | | +--Caldilinea (1) | | | | | | | | | +--Caldilinea aerophila DSM 14535 = NBRC 104270 (1) | | | | | | | +--unclassifiedChloroflexi (26) | | | | | | | | | +--Chloroflexi bacterium 54-19 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_19FT_COMBO_62_14 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_13_56_8 (1) | | | | | | | | | +--Chloroflexi bacterium RIFOXYD12_FULL_57_15 (1) | | | | | | | | | +--Chloroflexi bacterium OLB15 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_19FT_COMBO_49_13 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_16_54_11 (1) | | | | | | | | | +--Chloroflexi bacterium 13_1_20CM_2_59_7 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_16_47_49 (1) | | | | | | | | | +--Chloroflexi bacterium OLB14 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_19FT_COMBO_56_12 (1) | | | | | | | | | +--Chloroflexi bacterium GWB2_49_20 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_16_48_8 (1) | | | | | | | | | +--Chloroflexi bacterium GWB2_54_36 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_16_64_43 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_13_60_9 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_13_68_17 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_16_57_9 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_16_63_12 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_13_50_21 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_13_48_10 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_16_51_16 (1) | | | | | | | | | +--Chloroflexi bacterium 44-23 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_19FT_COMBO_55_16 (1) | | | | | | | | | +--Chloroflexi bacterium OLB13 (1) | | | | | | | | | +--Chloroflexi bacterium RBG_16_54_18 (1) | | | | | | | +--Anaerolineae (13) | | | | | | | | | +--Anaerolineae bacterium SM23_84 (1) | | | | | | | | | +--Anaerolineales (6) | | | | | | | | | | | +--Anaerolineaceae (6) | | | | | | | | | | | +--Anaerolinaceae bacterium 46_22 (1) | | | | | | | | | | | +--Anaerolineaceae bacterium 4572_32.1 (1) | | | | | | | | | | | +--Flexilinea flocculi (1) | | | | | | | | | | | +--Anaerolineaceae bacterium oral taxon 439 (1) | | | | | | | | | | | +--Ornatilinea apprima (1) | | | | | | | | | | | +--Anaerolinea sp. 4484_236 (1) | | | | | | | | | +--Anaerolineae bacterium CG1_02_58_13 (1) | | | | | | | | | +--Anaerolineae bacterium CG2_30_58_95 (1) | | | | | | | | | +--Anaerolineae bacterium 49_20 (1) | | | | | | | | | +--Anaerolineae bacterium SM23_ 63 (2) | | | | | | | | | +--Anaerolineae bacterium CG2_30_57_67 (1) | | | | | | | +--Thermomicrobia (1) | | | | | | | +--Sphaerobacteridae (1) | | | | | | | +--Sphaerobacterales (1) | | | | | | | +--Sphaerobacterineae (1) | | | | | | | +--Sphaerobacteraceae (1) | | | | | | | +--Nitrolancea (1) | | | | | | | +--Nitrolancea hollandica Lb (1) | | | | | +--Firmicutes (796) | | | | | +--Firmicutes bacterium CAG:170 (1) | | | | | +--Firmicutes bacterium CAG:882 (1) | | | | | +--Firmicutes bacterium CAG:124 (1) | | | | | +--Erysipelotrichia (9) | | | | | | | +--Erysipelotrichales (9) | | | | | | | +--Erysipelotrichaceae (9) | | | | | | | +--Turicibacter sp. H121 (4) | | | | | | | +--Candidatus Stoquefichus sp. KLE1796 (1) | | | | | | | +--Eggerthia (1) | | | | | | | | | +--Eggerthia catenaformis OT 569 = DSM 20559 (1) | | | | | | | +--Coprobacillus (2) | | | | | | | | | +--Coprobacillus sp. CAG:235 (1) | | | | | | | | | +--Coprobacillus sp. CAG:605 (1) | | | | | | | +--Catenibacterium (1) | | | | | | | +--Catenibacterium sp. CAG:290 (1) | | | | | +--Firmicutes bacterium CAG:534 (1) | | | | | +--Firmicutes bacterium CAG:65 (1) | | | | | +--Firmicutes bacterium CAG:424 (1) | | | | | +--Firmicutes bacterium CAG:95 (1) | | | | | +--Firmicutes bacterium CAG:466 (1) | | | | | +--Firmicutes bacterium CAG:227 (1) | | | | | +--Firmicutes bacterium CAG:94 (1) | | | | | +--Firmicutes bacterium CAG:110 (1) | | | | | +--Firmicutes bacterium CAG:24 (1) | | | | | +--Limnochordia (1) | | | | | | | +--Limnochordales (1) | | | | | | | +--Limnochordaceae (1) | | | | | | | +--Limnochorda pilosa (1) | | | | | +--Firmicutes bacterium CAG:41 (1) | | | | | +--Firmicutes bacterium CAG:884 (1) | | | | | +--Firmicutes bacterium CAG:83 (1) | | | | | +--Firmicutes bacterium CAG:56 (1) | | | | | +--Bacilli (356) | | | | | | | +--Lactobacillales (88) | | | | | | | | | +--Carnobacteriaceae (10) | | | | | | | | | | | +--Marinilactibacillus sp. 15R (1) | | | | | | | | | | | +--Alkalibacterium sp. AK22 (1) | | | | | | | | | | | +--Carnobacterium (2) | | | | | | | | | | | | | +--Carnobacterium inhibens subsp. gilichinskyi (1) | | | | | | | | | | | | | +--Carnobacterium maltaromaticum LMA28 (1) | | | | | | | | | | | +--Alloiococcus (1) | | | | | | | | | | | | | +--Alloiococcus otitis ATCC 51267 (1) | | | | | | | | | | | +--Alkalibacterium sp. 20 (1) | | | | | | | | | | | +--Carnobacterium sp. CP1 (1) | | | | | | | | | | | +--Jeotgalibaca sp. PTS2502 (1) | | | | | | | | | | | +--Atopostipes (1) | | | | | | | | | | | | | +--Atopostipes suicloacalis DSM 15692 (1) | | | | | | | | | | | +--Dolosigranulum (1) | | | | | | | | | | | +--Dolosigranulum pigrum ATCC 51524 (1) | | | | | | | | | +--Streptococcaceae (17) | | | | | | | | | | | +--Streptococcus pantholopis (1) | | | | | | | | | | | +--Streptococcus cuniculi (1) | | | | | | | | | | | +--Streptococcus (7) | | | | | | | | | | | | | +--Streptococcus sobrinus W1703 (1) | | | | | | | | | | | | | +--Streptococcus pyogenes serotype M1 (1) | | | | | | | | | | | | | +--Streptococcusdysgalactiaegroup (1) | | | | | | | | | | | | | | | +--Streptococcusdysgalactiae (1) | | | | | | | | | | | | | | | +--Streptococcus dysgalactiae subsp. equisimilis RE378 (1) | | | | | | | | | | | | | +--Streptococcus agalactiae LMG 14747 (1) | | | | | | | | | | | | | +--Streptococcus iniae IUSA1 (1) | | | | | | | | | | | | | +--Streptococcus ratti FA-1 = DSM 20564 (1) | | | | | | | | | | | | | +--Streptococcus lutetiensis 033 (1) | | | | | | | | | | | +--Streptococcus sp. DD13 (1) | | | | | | | | | | | +--Streptococcus sp. HSISM1 (1) | | | | | | | | | | | +--Streptococcus sp. DD12 (1) | | | | | | | | | | | +--Streptococcus sp. 'caviae' (1) | | | | | | | | | | | +--Streptococcus sp. HSISB1 (1) | | | | | | | | | | | +--Floricoccus tropicus (1) | | | | | | | | | | | +--Streptococcus varani (1) | | | | | | | | | | | +--Lactococcus (1) | | | | | | | | | | | +--Lactococcuslactis (1) | | | | | | | | | | | +--Lactococcus lactis subsp. cremoris TIFN6 (1) | | | | | | | | | +--Enterococcaceae (30) | | | | | | | | | | | +--Enterococcus sp. HSIEG1 (1) | | | | | | | | | | | +--Enterococcus sp. 9E7_DIV0242 (1) | | | | | | | | | | | +--Enterococcus sp. 6C8_DIV0013 (1) | | | | | | | | | | | +--Enterococcus sp. 7F3_DIV0205 (1) | | | | | | | | | | | +--Enterococcus (15) | | | | | | | | | | | | | +--Enterococcus dispar ATCC 51266 (1) | | | | | | | | | | | | | +--Enterococcus durans ATCC 6056 (1) | | | | | | | | | | | | | +--Enterococcus phoeniculicola ATCC BAA-412 (1) | | | | | | | | | | | | | +--Enterococcus pallens ATCC BAA-351 (1) | | | | | | | | | | | | | +--Enterococcus columbae DSM 7374 = ATCC 51263 (1) | | | | | | | | | | | | | +--Enterococcus villorum ATCC 700913 (1) | | | | | | | | | | | | | +--Enterococcus mundtii QU 25 (1) | | | | | | | | | | | | | +--Enterococcus sulfureus ATCC 49903 (1) | | | | | | | | | | | | | +--Enterococcus asini ATCC 700915 (1) | | | | | | | | | | | | | +--Enterococcus cecorum DSM 20682 = ATCC 43198 (1) | | | | | | | | | | | | | +--Enterococcus avium ATCC 14025 (1) | | | | | | | | | | | | | +--Enterococcus gilvus ATCC BAA-350 (1) | | | | | | | | | | | | | +--Enterococcussaccharolyticus (1) | | | | | | | | | | | | | | | +--Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076 (1) | | | | | | | | | | | | | +--Enterococcus faecalis 13-SD-W-01 (1) | | | | | | | | | | | | | +--Enterococcus haemoperoxidus ATCC BAA-382 (1) | | | | | | | | | | | +--Catellicoccus (1) | | | | | | | | | | | | | +--Catellicoccus marimammalium M35/04/3 (1) | | | | | | | | | | | +--Enterococcus sp. 2G9_DIV0600 (1) | | | | | | | | | | | +--Enterococcus sp. 4G2_DIV0659 (1) | | | | | | | | | | | +--Enterococcus sp. RIT-PI-f (1) | | | | | | | | | | | +--Enterococcus sp. 9D6_DIV0238 (1) | | | | | | | | | | | +--Vagococcus (2) | | | | | | | | | | | | | +--Vagococcus fluvialis bH819 (1) | | | | | | | | | | | | | +--Vagococcus lutrae LBD1 (1) | | | | | | | | | | | +--Enterococcus sp. 3H8_DIV0648 (1) | | | | | | | | | | | +--Enterococcus sp. 8G7_MSG3316 (1) | | | | | | | | | | | +--Tetragenococcus (1) | | | | | | | | | | | | | +--Tetragenococcus muriaticus 3MR10-3 (1) | | | | | | | | | | | +--Enterococcus sp. 10A9_DIV0425 (1) | | | | | | | | | +--Lactobacillaceae (28) | | | | | | | | | | | +--Lactobacillus mixtipabuli (1) | | | | | | | | | | | +--Lactobacillus (25) | | | | | | | | | | | | | +--Lactobacillus fabifermentans T30PCM01 (1) | | | | | | | | | | | | | +--Lactobacillus cacaonum DSM 21116 (1) | | | | | | | | | | | | | +--Lactobacillus oryzae JCM 18671 (1) | | | | | | | | | | | | | +--Lactobacillus algidus DSM 15638 (1) | | | | | | | | | | | | | +--Lactobacillus frumenti DSM 13145 (1) | | | | | | | | | | | | | +--Lactobacillusaviarius (1) | | | | | | | | | | | | | | | +--Lactobacillus aviarius subsp. araffinosus DSM 20653 (1) | | | | | | | | | | | | | +--Lactobacilluscoryniformis (1) | | | | | | | | | | | | | | | +--Lactobacillus coryniformis subsp. coryniformis CECT 5711 (1) | | | | | | | | | | | | | +--Lactobacillus similis DSM 23365 = JCM 2765 (1) | | | | | | | | | | | | | +--Lactobacillus namurensis DSM 19117 (1) | | | | | | | | | | | | | +--Lactobacillus harbinensis DSM 16991 (1) | | | | | | | | | | | | | +--Lactobacillus bifermentans DSM 20003 (1) | | | | | | | | | | | | | +--Lactobacillus capillatus DSM 19910 (1) | | | | | | | | | | | | | +--Lactobacillus perolens DSM 12744 (1) | | | | | | | | | | | | | +--Lactobacillus silagei JCM 19001 (1) | | | | | | | | | | | | | +--Lactobacillus odoratitofui DSM 19909 = JCM 15043 (1) | | | | | | | | | | | | | +--Lactobacillus oeni DSM 19972 (1) | | | | | | | | | | | | | +--Lactobacillus composti DSM 18527 = JCM 14202 (1) | | | | | | | | | | | | | +--Lactobacillus sharpeae JCM 1186 = DSM 20505 (1) | | | | | | | | | | | | | +--Lactobacillus hayakitensis DSM 18933 = JCM 14209 (1) | | | | | | | | | | | | | +--Lactobacillus suebicus DSM 5007 = KCTC 3549 (1) | | | | | | | | | | | | | +--Lactobacillus saerimneri 30a (1) | | | | | | | | | | | | | +--Lactobacillus rennini DSM 20253 (1) | | | | | | | | | | | | | +--Lactobacillus shenzhenensis LY-73 (1) | | | | | | | | | | | | | +--Lactobacillus vaccinostercus DSM 20634 (1) | | | | | | | | | | | | | +--Lactobacillus vini DSM 20605 (1) | | | | | | | | | | | +--Pediococcus (1) | | | | | | | | | | | | | +--Pediococcus claussenii ATCC BAA-344 (1) | | | | | | | | | | | +--Lactobacillus wasatchensis (1) | | | | | | | | | +--Aerococcaceae (3) | | | | | | | | | +--Facklamia (2) | | | | | | | | | | | +--Facklamia languida CCUG 37842 (1) | | | | | | | | | | | +--Facklamia hominis CCUG 36813 (1) | | | | | | | | | +--Globicatella sp. HMSC072A10 (1) | | | | | | | +--Bacillales (266) | | | | | | | | | +--Staphylococcaceae (10) | | | | | | | | | | | +--Salinicoccus (1) | | | | | | | | | | | | | +--Salinicoccus alkaliphilus DSM 16010 (1) | | | | | | | | | | | +--Staphylococcus sp. NAM3COL9 (1) | | | | | | | | | | | +--Staphylococcus sp. HMSC078E07 (1) | | | | | | | | | | | +--Staphylococcus sp. HGB0015 (1) | | | | | | | | | | | +--Jeotgalicoccus saudimassiliensis (1) | | | | | | | | | | | +--Staphylococcus (5) | | | | | | | | | | | +--Staphylococcus massiliensis S46 (1) | | | | | | | | | | | +--Staphylococcus pettenkoferi VCU012 (1) | | | | | | | | | | | +--Staphylococcus chromogenes MU 970 (1) | | | | | | | | | | | +--Staphylococcus sp. CAG:324 (1) | | | | | | | | | | | +--Staphylococcus aureus C0673 (1) | | | | | | | | | +--Planococcaceae (17) | | | | | | | | | | | +--Sporosarcina sp. HYO08 (3) | | | | | | | | | | | +--Bhargavaea (2) | | | | | | | | | | | | | +--Bhargavaea cecembensis DSE10 (2) | | | | | | | | | | | +--Kurthia sp. 11kri321 (2) | | | | | | | | | | | +--Viridibacillus (2) | | | | | | | | | | | | | +--Viridibacillus arenosi FSL R5-213 (2) | | | | | | | | | | | +--Jeotgalibacillus malaysiensis (2) | | | | | | | | | | | +--Planococcus massiliensis (1) | | | | | | | | | | | +--Paenisporosarcina sp. HGH0030 (2) | | | | | | | | | | | +--Sporosarcina sp. P33 (2) | | | | | | | | | | | +--Planococcus sp. PAMC 21323 (1) | | | | | | | | | +--Listeriaceae (7) | | | | | | | | | | | +--Listeria booriae (1) | | | | | | | | | | | +--Brochothrix (2) | | | | | | | | | | | | | +--Brochothrix campestris FSL F6-1037 (1) | | | | | | | | | | | | | +--Brochothrix thermosphacta DSM 20171 = FSL F6-1036 (1) | | | | | | | | | | | +--Listeria (3) | | | | | | | | | | | | | +--Listeria floridensis FSL S10-1187 (1) | | | | | | | | | | | | | +--Listeria fleischmannii subsp. coloradonensis (1) | | | | | | | | | | | | | +--Listeria aquatica FSL S10-1188 (1) | | | | | | | | | | | +--Listeriaceae bacterium FSL A5-0209 (1) | | | | | | | | | +--Bacillaceae (160) | | | | | | | | | | | +--Halobacillus sp. BBL2006 (1) | | | | | | | | | | | +--Geobacillus sp. CAMR12739 (2) | | | | | | | | | | | +--Bacillus sp. JCM 19045 (2) | | | | | | | | | | | +--Anaerobacillus sp. NB2006 (1) | | | | | | | | | | | +--Bacillus sp. LF1 (2) | | | | | | | | | | | +--Bacillus sp. TS-2 (2) | | | | | | | | | | | +--Bacillus sp. CHD6a (2) | | | | | | | | | | | +--Bacillus xerothermodurans (1) | | | | | | | | | | | +--Domibacillus iocasae (2) | | | | | | | | | | | +--Bacillus sp. FJAT-26390 (1) | | | | | | | | | | | +--Anoxybacillus sp. B7M1 (2) | | | | | | | | | | | +--Lysinibacillus sp. BF-4 (2) | | | | | | | | | | | +--Domibacillus antri (3) | | | | | | | | | | | +--Pontibacillus (6) | | | | | | | | | | | | | +--Pontibacillus marinus BH030004 = DSM 16465 (1) | | | | | | | | | | | | | +--Pontibacillus chungwhensis BH030062 (2) | | | | | | | | | | | | | +--Pontibacillus litoralis JSM 072002 (1) | | | | | | | | | | | | | +--Pontibacillus yanchengensis Y32 (1) | | | | | | | | | | | | | +--Pontibacillus halophilus JSM 076056 = DSM 19796 (1) | | | | | | | | | | | +--[Bacillus] sp. KCTC 13219 (1) | | | | | | | | | | | +--Gracilibacillus (2) | | | | | | | | | | | | | +--Gracilibacillus boraciitolerans JCM 21714 (1) | | | | | | | | | | | | | +--Gracilibacillus halophilus YIM-C55.5 (1) | | | | | | | | | | | +--Bacillus sp. X1(2014) (2) | | | | | | | | | | | +--Salimicrobium jeotgali (1) | | | | | | | | | | | +--Bacillus sp. OV166 (2) | | | | | | | | | | | +--Bacillus sp. FJAT-27916 (2) | | | | | | | | | | | +--Bacillus obstructivus (2) | | | | | | | | | | | +--Fictibacillus (2) | | | | | | | | | | | | | +--Fictibacillus macauensis ZFHKF-1 (2) | | | | | | | | | | | +--Bacillus sp. HMSC76G11 (2) | | | | | | | | | | | +--Lysinibacillus contaminans (2) | | | | | | | | | | | +--Bacillus sp. FJAT-27264 (1) | | | | | | | | | | | +--Bacillus sp. VT-16-64 (1) | | | | | | | | | | | +--Psychrobacillus sp. FJAT-21963 (3) | | | | | | | | | | | +--Anoxybacillus sp. BCO1 (1) | | | | | | | | | | | +--Bacillus sp. FJAT-25509 (1) | | | | | | | | | | | +--Bacillus sp. FJAT-22058 (3) | | | | | | | | | | | +--Geobacillus sp. B4113_201601 (2) | | | | | | | | | | | +--Halobacillus sp. BAB-2008 (1) | | | | | | | | | | | +--Fictibacillus phosphorivorans (2) | | | | | | | | | | | +--Bacillus glycinifermentans (2) | | | | | | | | | | | +--Bacillus sp. SGD-V-76 (2) | | | | | | | | | | | +--Bacillus sp. MRMR6 (2) | | | | | | | | | | | +--Bacillus campisalis (2) | | | | | | | | | | | +--Bacillus sp. FJAT-27997 (2) | | | | | | | | | | | +--Bacillus solimangrovi (2) | | | | | | | | | | | +--Amphibacillus (1) | | | | | | | | | | | | | +--Amphibacillus xylanus NBRC 15112 (1) | | | | | | | | | | | +--Bacillus sp. FJAT-27231 (2) | | | | | | | | | | | +--Paraliobacillus sp. PM-2 (1) | | | | | | | | | | | +--Virgibacillus massiliensis (2) | | | | | | | | | | | +--Quasibacillus thermotolerans (2) | | | | | | | | | | | +--Lysinibacillus sp. F5 (2) | | | | | | | | | | | +--Lysinibacillus (16) | | | | | | | | | | | | | +--Lysinibacillus manganicus DSM 26584 (3) | | | | | | | | | | | | | +--Lysinibacillus odysseyi 34hs-1 = NBRC 100172 (2) | | | | | | | | | | | | | +--Lysinibacillus sphaericus OT4b.31 (2) | | | | | | | | | | | | | +--Lysinibacillus sinduriensis BLB-1 = JCM 15800 (6) | | | | | | | | | | | | | +--Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 (3) | | | | | | | | | | | +--Bacillus sp. SJS (2) | | | | | | | | | | | +--Bacillus sp. FJAT-18017 (2) | | | | | | | | | | | +--Bacillus sp. LL01 (3) | | | | | | | | | | | +--Bacillus sp. MUM 116 (2) | | | | | | | | | | | +--Virgibacillus sp. LM2416 (2) | | | | | | | | | | | +--Lentibacillus amyloliquefaciens (2) | | | | | | | | | | | +--Bacillus sp. FJAT-27986 (2) | | | | | | | | | | | +--Bacillus nakamurai (2) | | | | | | | | | | | +--Bacillus sp. FJAT-21945 (2) | | | | | | | | | | | +--Bacillus gobiensis (3) | | | | | | | | | | | +--Bacillus sp. MUM 13 (3) | | | | | | | | | | | +--Tepidibacillus decaturensis (1) | | | | | | | | | | | +--Bacillus (22) | | | | | | | | | | | | | +--Bacillus infantis NRRL B-14911 (3) | | | | | | | | | | | | | +--Bacillus lehensis G1 (2) | | | | | | | | | | | | | +--Bacillus selenatarsenatis SF-1 (1) | | | | | | | | | | | | | +--Bacillus akibai JCM 9157 (3) | | | | | | | | | | | | | +--Bacillus alcalophilus ATCC 27647 = CGMCC 1.3604 (2) | | | | | | | | | | | | | +--Bacillus wakoensis JCM 9140 (2) | | | | | | | | | | | | | +--Bacillus vireti LMG 21834 (2) | | | | | | | | | | | | | +--Bacillus hemicellulosilyticus JCM 9152 (1) | | | | | | | | | | | | | +--Bacillus coahuilensis p1.1.43 (1) | | | | | | | | | | | | | +--Bacillus azotoformans LMG 9581 (3) | | | | | | | | | | | | | +--Bacillus bataviensis LMG 21833 (2) | | | | | | | | | | | +--Bacillus weihaiensis (2) | | | | | | | | | | | +--Bacillus sp. B-jedd (2) | | | | | | | | | | | +--Parageobacillus (2) | | | | | | | | | | | | | +--Parageobacillus caldoxylosilyticus NBRC 107762 (2) | | | | | | | | | | | +--Bacillus enclensis (2) | | | | | | | | | | | +--Bacillus sp. SA1-12 (2) | | | | | | | | | | | +--Geobacillus sp. BCO2 (2) | | | | | | | | | +--Paenibacillaceae (51) | | | | | | | | | | | +--Paenibacillaceae bacterium GAS479 (1) | | | | | | | | | | | +--Paenibacillus sp. Leaf72 (1) | | | | | | | | | | | +--Paenibacillus sp. JCM 10914 (1) | | | | | | | | | | | +--Paenibacillus sp. FSL A5-0031 (1) | | | | | | | | | | | +--Paenibacillus sp. IHBB 10380 (1) | | | | | | | | | | | +--Saccharibacillus (1) | | | | | | | | | | | | | +--Saccharibacillus sacchari DSM 19268 (1) | | | | | | | | | | | +--Paenibacillus sp. FSL R5-0912 (1) | | | | | | | | | | | +--Paenibacillus sp. TCA20 (1) | | | | | | | | | | | +--Paenibacillus sp. FSL H7-0331 (1) | | | | | | | | | | | +--Paenibacillus sp. Soil787 (1) | | | | | | | | | | | +--Paenibacillus sp. Soil522 (1) | | | | | | | | | | | +--Paenibacillus swuensis (1) | | | | | | | | | | | +--Paenibacillus sp. 32O-W (1) | | | | | | | | | | | +--Paenibacillus bovis (1) | | | | | | | | | | | +--Paenibacillus (8) | | | | | | | | | | | | | +--Paenibacillus mucilaginosus 3016 (1) | | | | | | | | | | | | | +--Paenibacillus alvei DSM 29 (1) | | | | | | | | | | | | | +--Paenibacillus popilliae ATCC 14706 (1) | | | | | | | | | | | | | +--Paenibacilluslarvae (1) | | | | | | | | | | | | | | | +--Paenibacillus larvae subsp. larvae DSM 25430 (1) | | | | | | | | | | | | | +--Paenibacillus pini JCM 16418 (1) | | | | | | | | | | | | | +--Paenibacillus uliginis N3/975 (1) | | | | | | | | | | | | | +--Paenibacillus dendritiformis C454 (1) | | | | | | | | | | | | | +--Paenibacillus sabinae T27 (1) | | | | | | | | | | | +--Paenibacillus sp. MAEPY2 (1) | | | | | | | | | | | +--Paenibacillus sp. FSL H8-0548 (1) | | | | | | | | | | | +--Brevibacillus sp. CF112 (2) | | | | | | | | | | | +--Paenibacillus sp. TI45-13ar (1) | | | | | | | | | | | +--Paenibacillus sp. LPB0068 (1) | | | | | | | | | | | +--Paenibacillus sp. UNCCL117 (1) | | | | | | | | | | | +--Aneurinibacillusgroup (2) | | | | | | | | | | | | | +--Aneurinibacillus sp. XH2 (2) | | | | | | | | | | | +--Paenibacillus darwinianus (1) | | | | | | | | | | | +--Paenibacillus beijingensis (1) | | | | | | | | | | | +--Paenibacillus ferrarius (1) | | | | | | | | | | | +--Paenibacillus oryzae (1) | | | | | | | | | | | +--Paenibacillus yonginensis (1) | | | | | | | | | | | +--Paenibacillus aquistagni (1) | | | | | | | | | | | +--Paenibacillus sp. FSL H7-0737 (1) | | | | | | | | | | | +--Paenibacillus sp. VKM B-2647 (1) | | | | | | | | | | | +--Paenibacillus selenitireducens (1) | | | | | | | | | | | +--Paenibacillus sp. Soil750 (1) | | | | | | | | | | | +--Paenibacillus sp. FSL R7-0331 (1) | | | | | | | | | | | +--Paenibacillus sp. DMB20 (1) | | | | | | | | | | | +--Paenibacillus tyrfis (1) | | | | | | | | | | | +--Paenibacillus sp. FSL H7-0357 (1) | | | | | | | | | | | +--Brevibacillus (4) | | | | | | | | | | | | | +--Brevibacillus borstelensis AK1 (2) | | | | | | | | | | | | | +--Brevibacillus panacihumi W25 (2) | | | | | | | | | | | +--Cohnella kolymensis (1) | | | | | | | | | | | +--Paenibacillus sp. P1XP2 (1) | | | | | | | | | +--Alicyclobacillaceae (11) | | | | | | | | | | | +--Alicyclobacillus (3) | | | | | | | | | | | | | +--Alicyclobacillus hesperidum URH17-3-68 (1) | | | | | | | | | | | | | +--Alicyclobacillus acidoterrestris ATCC 49025 (2) | | | | | | | | | | | +--Alicyclobacillus sp. USBA-503 (1) | | | | | | | | | | | +--Alicyclobacillus sp. RIFOXYA1_FULL_53_8 (1) | | | | | | | | | | | +--Tumebacillus algifaecis (2) | | | | | | | | | | | +--Tumebacillus flagellatus (2) | | | | | | | | | | | +--Tumebacillus sp. AR23208 (2) | | | | | | | | | +--Sporolactobacillaceae (1) | | | | | | | | | | | +--Sporolactobacillus (1) | | | | | | | | | | | +--Sporolactobacillus laevolacticus DSM 442 (1) | | | | | | | | | +--unclassifiedBacillales (4) | | | | | | | | | | | +--Acidibacillus ferrooxidans (1) | | | | | | | | | | | +--Geomicrobium sp. JCM 19039 (1) | | | | | | | | | | | +--Desulfuribacillus stibiiarsenatis (1) | | | | | | | | | | | +--Geomicrobium sp. JCM 19038 (1) | | | | | | | | | +--Thermoactinomycetaceae (5) | | | | | | | | | +--Thermoactinomyces sp. Gus2-1 (2) | | | | | | | | | +--Marininema halotolerans (1) | | | | | | | | | +--Thermoactinomyces sp. DSM 45891 (1) | | | | | | | | | +--Novibacillus thermophilus (1) | | | | | | | +--unclassifiedBacilli (2) | | | | | | | +--Bacilli bacterium VT-13-104 (2) | | | | | +--Firmicutes bacterium CAG:238 (1) | | | | | +--Firmicutes bacterium CAG:321 (1) | | | | | +--Firmicutes bacterium CAG:129 (1) | | | | | +--Firmicutes bacterium CAG:582 (1) | | | | | +--Tissierellia (16) | | | | | | | +--Tissierellales (10) | | | | | | | | | +--Sporanaerobacter sp. PP17-6a (1) | | | | | | | | | +--Sporanaerobacter (1) | | | | | | | | | | | +--Sporanaerobacter acetigenes DSM 13106 (1) | | | | | | | | | +--Tissierellaceae (2) | | | | | | | | | | | +--Tissierella (2) | | | | | | | | | | | +--Tissierella creatinophila DSM 6911 (1) | | | | | | | | | | | +--Tissierella praeacuta DSM 18095 (1) | | | | | | | | | +--Peptoniphilaceae (6) | | | | | | | | | +--Peptoniphilus (2) | | | | | | | | | | | +--Peptoniphilus lacrimalis DNF00528 (2) | | | | | | | | | +--Peptoniphilus sp. ING2-D1G (1) | | | | | | | | | +--Anaerosphaera sp. HMSC064C01 (1) | | | | | | | | | +--Anaerosphaera (1) | | | | | | | | | | | +--Anaerosphaera aminiphila DSM 21120 (1) | | | | | | | | | +--Peptoniphilus grossensis (1) | | | | | | | +--unclassifiedTissierellia (6) | | | | | | | +--Dethiosulfatibacter (1) | | | | | | | | | +--Dethiosulfatibacter aminovorans DSM 17477 (1) | | | | | | | +--Tissierellia bacterium S7-1-4 (1) | | | | | | | +--[Clostridium] ultunense Esp (2) | | | | | | | +--Tissierellia bacterium S5-A11 (2) | | | | | +--Firmicutes bacterium CAG:212 (1) | | | | | +--unclassifiedFirmicutessensustricto (7) | | | | | | | +--Firmicutes bacterium CAG:176_63_11 (1) | | | | | | | +--Firmicutes bacterium ASF500 (1) | | | | | | | +--Firmicutes bacterium CAG:129_59_24 (1) | | | | | | | +--Firmicutes bacterium CAG:137_57_8 (1) | | | | | | | +--Firmicutes bacterium RBG_13_65_8 (1) | | | | | | | +--Firmicutes bacterium M10-2 (1) | | | | | | | +--Firmicutes bacterium ML8_F2 (1) | | | | | +--Firmicutes bacterium CAG:646 (1) | | | | | +--Firmicutes bacterium CAG:137 (1) | | | | | +--Negativicutes (29) | | | | | | | +--Selenomonadales (15) | | | | | | | | | +--Selenomonadaceae (4) | | | | | | | | | | | +--Schwartzia (1) | | | | | | | | | | | | | +--Schwartzia succinivorans DSM 10502 (1) | | | | | | | | | | | +--Mitsuokella (1) | | | | | | | | | | | | | +--Mitsuokella sp. oral taxon 131 str. W9106 (1) | | | | | | | | | | | +--Megamonas (1) | | | | | | | | | | | | | +--Megamonas funiformis YIT 11815 (1) | | | | | | | | | | | +--Selenomonas (1) | | | | | | | | | | | +--Selenomonasruminantium (1) | | | | | | | | | | | +--Selenomonas ruminantium subsp. lactilytica TAM6421 (1) | | | | | | | | | +--Sporomusaceae (11) | | | | | | | | | +--Anaerosporomusa subterranea (3) | | | | | | | | | +--Pelosinus (3) | | | | | | | | | | | +--Pelosinus fermentans B4 (3) | | | | | | | | | +--Sporomusa (2) | | | | | | | | | | | +--Sporomusa sphaeroides DSM 2875 (2) | | | | | | | | | +--Propionispora sp. 2/2-37 (3) | | | | | | | +--Acidaminococcales (2) | | | | | | | | | +--Acidaminococcaceae (2) | | | | | | | | | +--Phascolarctobacterium sp. CAG:266 (1) | | | | | | | | | +--Phascolarctobacterium sp. CAG:207 (1) | | | | | | | +--Veillonellales (12) | | | | | | | +--Veillonellaceae (12) | | | | | | | +--Veillonella (2) | | | | | | | | | +--Veillonella montpellierensis DNF00314 (1) | | | | | | | | | +--Veillonella sp. CAG:933 (1) | | | | | | | +--Veillonellaceae bacterium DNF00626 (1) | | | | | | | +--Negativicoccus (2) | | | | | | | | | +--Negativicoccus succinicivorans DORA_17_25 (2) | | | | | | | +--Anaeroglobus (1) | | | | | | | | | +--Anaeroglobus geminatus F0357 (1) | | | | | | | +--Dialister (5) | | | | | | | | | +--Dialister succinatiphilus YIT 11850 (1) | | | | | | | | | +--Dialister sp. CAG:357 (1) | | | | | | | | | +--Dialister invisus CAG:218 (1) | | | | | | | | | +--Dialister sp. CAG:486 (1) | | | | | | | | | +--Dialister sp. CAG:588 (1) | | | | | | | +--Megasphaera (1) | | | | | | | +--Megasphaera cerevisiae DSM 20462 (1) | | | | | +--Firmicutes bacterium CAG:194 (1) | | | | | +--Firmicutes bacterium CAG:145 (1) | | | | | +--Firmicutes bacterium CAG:552 (1) | | | | | +--Firmicutes bacterium CAG:240 (1) | | | | | +--Clostridia (347) | | | | | | | +--Thermoanaerobacterales (8) | | | | | | | | | +--Thermodesulfobiaceae (1) | | | | | | | | | | | +--Thermodesulfobium (1) | | | | | | | | | | | +--Thermodesulfobium narugense DSM 14796 (1) | | | | | | | | | +--Thermoanaerobacterales bacterium 50_218 (1) | | | | | | | | | +--Thermoanaerobacteraceae (4) | | | | | | | | | | | +--Moorellagroup (1) | | | | | | | | | | | | | +--Moorella sp. 60_41 (1) | | | | | | | | | | | +--Thermanaeromonas (1) | | | | | | | | | | | | | +--Thermanaeromonas toyohensis ToBE (1) | | | | | | | | | | | +--Tepidanaerobacter (1) | | | | | | | | | | | | | +--Tepidanaerobacter acetatoxydans Re1 (1) | | | | | | | | | | | +--Thermacetogenium (1) | | | | | | | | | | | +--Thermacetogenium phaeum DSM 12270 (1) | | | | | | | | | +--ThermoanaerobacteralesFamilyIII.IncertaeSedis (2) | | | | | | | | | +--Thermoanaerobacterium (2) | | | | | | | | | +--Thermoanaerobacterium saccharolyticum JW/SL-YS485 (2) | | | | | | | +--unclassifiedClostridia (3) | | | | | | | | | +--Clostridia bacterium BRH_c25 (2) | | | | | | | | | +--Clostridia bacterium 41_269 (1) | | | | | | | +--Halanaerobiales (3) | | | | | | | | | +--Halanaerobiaceae (1) | | | | | | | | | | | +--Halanaerobium (1) | | | | | | | | | | | +--Halanaerobiumsaccharolyticum (1) | | | | | | | | | | | +--Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 (1) | | | | | | | | | +--Halobacteroidaceae (2) | | | | | | | | | +--Halobacteroidaceae bacterium T328-2 (1) | | | | | | | | | +--Orenia metallireducens (1) | | | | | | | +--Clostridiales (333) | | | | | | | +--Ruminococcaceae (34) | | | | | | | | | +--Ruminiclostridium sp. KB18 (1) | | | | | | | | | +--Sporobacter (1) | | | | | | | | | | | +--Sporobacter termitidis DSM 10068 (1) | | | | | | | | | +--Subdoligranulum sp. 4_3_54A2FAA (1) | | | | | | | | | +--Faecalibacterium sp. CAG:82-related_59_9 (1) | | | | | | | | | +--Anaerotruncus (1) | | | | | | | | | | | +--Anaerotruncus sp. CAG:528 (1) | | | | | | | | | +--Ruminococcus sp. 37_24 (1) | | | | | | | | | +--Ruminococcus (15) | | | | | | | | | | | +--Ruminococcus sp. CAG:254 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:330 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:353 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:403 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:177 (1) | | | | | | | | | | | +--Ruminococcus flavefaciens 007c (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:563 (1) | | | | | | | | | | | +--Ruminococcus callidus ATCC 27760 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:108 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:9 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:60 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:17 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:624 (1) | | | | | | | | | | | +--Ruminococcus torques CAG:61 (1) | | | | | | | | | | | +--Ruminococcus gnavus CAG:126 (1) | | | | | | | | | +--Subdoligranulum sp. 60_17 (1) | | | | | | | | | +--Ruminococcaceae bacterium CPB6 (1) | | | | | | | | | +--Ruminococcus sp. DSM 100440 (1) | | | | | | | | | +--Ruminiclostridium (4) | | | | | | | | | | | +--[Clostridium] termitidis CT1112 (1) | | | | | | | | | | | +--[Clostridium] clariflavum DSM 19732 (1) | | | | | | | | | | | +--[Clostridium] straminisolvens JCM 21531 (1) | | | | | | | | | | | +--[Clostridium]stercorarium (1) | | | | | | | | | | | +--[Clostridium] stercorarium subsp. stercorarium DSM 8532 (1) | | | | | | | | | +--Faecalibacterium (3) | | | | | | | | | | | +--Faecalibacterium sp. CAG:74 (1) | | | | | | | | | | | +--Faecalibacterium sp. CAG:1138 (1) | | | | | | | | | | | +--Faecalibacterium sp. CAG:82 (1) | | | | | | | | | +--Ruminococcus sp. CAG:9-related_41_34 (1) | | | | | | | | | +--Papillibacter (1) | | | | | | | | | | | +--Papillibacter cinnamivorans DSM 12816 (1) | | | | | | | | | +--Subdoligranulum (1) | | | | | | | | | +--Subdoligranulum sp. CAG:314 (1) | | | | | | | +--Peptostreptococcaceae (9) | | | | | | | | | +--Peptoclostridium (2) | | | | | | | | | | | +--Peptoclostridium litorale DSM 5388 (1) | | | | | | | | | | | +--Peptoclostridium acidaminophilum DSM 3953 (1) | | | | | | | | | +--Terrisporobacter othiniensis (1) | | | | | | | | | +--Paraclostridium benzoelyticum (1) | | | | | | | | | +--Criibacterium bergeronii (1) | | | | | | | | | +--Paeniclostridium (1) | | | | | | | | | | | +--Paeniclostridium sordellii ATCC 9714 (1) | | | | | | | | | +--unclassifiedPeptostreptococcaceae (2) | | | | | | | | | | | +--Peptostreptococcaceae bacterium oral taxon 113 str. W5053 (1) | | | | | | | | | | | +--[Clostridium] paradoxum JW-YL-7 = DSM 7308 (1) | | | | | | | | | +--Peptostreptococcus (1) | | | | | | | | | +--Peptostreptococcus anaerobius CAG:621 (1) | | | | | | | +--Eubacteriaceae (25) | | | | | | | | | +--Eubacterium sp. 68-3-10 (1) | | | | | | | | | +--Eubacterium sp. 3_1_31 (1) | | | | | | | | | +--Eubacterium (15) | | | | | | | | | | | +--Eubacterium sp. CAG:603 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:274 (1) | | | | | | | | | | | +--Eubacterium plexicaudatum ASF492 (1) | | | | | | | | | | | +--Eubacterium hallii CAG:12 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:202 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:76 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:786 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:38 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:192 (1) | | | | | | | | | | | +--Eubacterium dolichum CAG:375 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:161 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:156 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:252 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:581 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:86 (1) | | | | | | | | | +--Eubacterium sp. An11 (1) | | | | | | | | | +--Alkalibacter (1) | | | | | | | | | | | +--Alkalibacter saccharofermentans DSM 14828 (1) | | | | | | | | | +--Eubacteriaceae bacterium CHKCI004 (1) | | | | | | | | | +--Garciella (2) | | | | | | | | | | | +--Garciella nitratireducens DSM 15102 (2) | | | | | | | | | +--Eubacterium sp. 14-2 (1) | | | | | | | | | +--Eubacteriaceae bacterium CHKCI005 (1) | | | | | | | | | +--Acetobacterium (1) | | | | | | | | | +--Acetobacterium woodii DSM 1030 (1) | | | | | | | +--Clostridiaceae (138) | | | | | | | | | +--Clostridium sp. 26_22 (1) | | | | | | | | | +--Clostridium sp. BL8 (1) | | | | | | | | | +--Clostridium sp. C105KSO13 (1) | | | | | | | | | +--Thermobrachium (1) | | | | | | | | | | | +--Thermobrachium celere DSM 8682 (1) | | | | | | | | | +--Caloramator quimbayensis (1) | | | | | | | | | +--Clostridium sp. 27_14 (1) | | | | | | | | | +--Clostridium amylolyticum (1) | | | | | | | | | +--Clostridium sp. Maddingley MBC34-26 (3) | | | | | | | | | +--Clostridium oryzae (1) | | | | | | | | | +--Caminicella (1) | | | | | | | | | | | +--Caminicella sporogenes DSM 14501 (1) | | | | | | | | | +--Lutispora (2) | | | | | | | | | | | +--Lutispora thermophila DSM 19022 (2) | | | | | | | | | +--Clostridium sp. KLE 1755 (1) | | | | | | | | | +--Caloranaerobacter (1) | | | | | | | | | | | +--Caloranaerobacter azorensis H53214 (1) | | | | | | | | | +--Clostridium bornimense (1) | | | | | | | | | +--Clostridium (97) | | | | | | | | | | | +--Clostridium sp. CAG:75 (1) | | | | | | | | | | | +--Clostridium sp. CAG:7 (1) | | | | | | | | | | | +--Clostridium sp. CAG:217 (1) | | | | | | | | | | | +--Clostridium tepidiprofundi DSM 19306 (2) | | | | | | | | | | | +--Clostridium magnum DSM 2767 (4) | | | | | | | | | | | +--Clostridium sp. CAG:1013 (1) | | | | | | | | | | | +--Clostridium sp. CAG:343 (1) | | | | | | | | | | | +--Clostridium sp. CAG:413 (1) | | | | | | | | | | | +--Clostridium sp. CAG:470 (1) | | | | | | | | | | | +--Clostridium chauvoei JF4335 (1) | | | | | | | | | | | +--Clostridium sp. CAG:62 (1) | | | | | | | | | | | +--Clostridium pasteurianum DSM 525 = ATCC 6013 (3) | | | | | | | | | | | +--Clostridium cylindrosporum DSM 605 (2) | | | | | | | | | | | +--Clostridium sp. CAG:230 (1) | | | | | | | | | | | +--Clostridium sp. CAG:226 (1) | | | | | | | | | | | +--Clostridium sp. CAG:169 (1) | | | | | | | | | | | +--Clostridium sp. CAG:299 (1) | | | | | | | | | | | +--Clostridium acidisoli DSM 12555 (2) | | | | | | | | | | | +--Clostridium sp. CAG:440 (1) | | | | | | | | | | | +--Clostridium sp. CAG:127 (1) | | | | | | | | | | | +--Clostridium sp. CAG:1024 (1) | | | | | | | | | | | +--Clostridium colicanis DSM 13634 (2) | | | | | | | | | | | +--Clostridium sp. CAG:964 (1) | | | | | | | | | | | +--Clostridium tyrobutyricum DIVETGP (2) | | | | | | | | | | | +--Clostridium sp. CAG:242 (1) | | | | | | | | | | | +--Clostridium sp. CAG:221 (2) | | | | | | | | | | | +--Clostridium sp. CAG:492 (1) | | | | | | | | | | | +--Clostridium autoethanogenum DSM 10061 (2) | | | | | | | | | | | +--Clostridium sp. CAG:448 (1) | | | | | | | | | | | +--Clostridium homopropionicum DSM 5847 (2) | | | | | | | | | | | +--Clostridium nexile CAG:348 (1) | | | | | | | | | | | +--Clostridium celatum DSM 1785 (1) | | | | | | | | | | | +--Clostridium grantii DSM 8605 (1) | | | | | | | | | | | +--Clostridium sp. CAG:43 (1) | | | | | | | | | | | +--Clostridium sp. CAG:780 (1) | | | | | | | | | | | +--Clostridium clostridioforme CAG:132 (1) | | | | | | | | | | | +--Clostridium sp. CAG:567 (1) | | | | | | | | | | | +--Clostridium sp. CAG:352 (1) | | | | | | | | | | | +--Clostridium sp. CAG:1193 (1) | | | | | | | | | | | +--Clostridium argentinense CDC 2741 (1) | | | | | | | | | | | +--Clostridium intestinale URNW (1) | | | | | | | | | | | +--Clostridium sp. CAG:356 (1) | | | | | | | | | | | +--Clostridium sp. CAG:253 (1) | | | | | | | | | | | +--Clostridium sp. CAG:590 (1) | | | | | | | | | | | +--Clostridium sp. CAG:510 (1) | | | | | | | | | | | +--Clostridium tetanomorphum DSM 665 (4) | | | | | | | | | | | +--Clostridium sp. CAG:167 (1) | | | | | | | | | | | +--Clostridium sp. CAG:557 (1) | | | | | | | | | | | +--Clostridium sp. CAG:762 (1) | | | | | | | | | | | +--Clostridium saccharobutylicum DSM 13864 (2) | | | | | | | | | | | +--Clostridium sp. CAG:417 (1) | | | | | | | | | | | +--Clostridium sp. CAG:452 (1) | | | | | | | | | | | +--Clostridium sp. CAG:609 (1) | | | | | | | | | | | +--Clostridium sp. CAG:798 (1) | | | | | | | | | | | +--Clostridium sp. CAG:594 (1) | | | | | | | | | | | +--Clostridium sp. CAG:273 (1) | | | | | | | | | | | +--Clostridium sp. CAG:575 (1) | | | | | | | | | | | +--Clostridium acetireducens DSM 10703 (2) | | | | | | | | | | | +--Clostridium bolteae CAG:59 (1) | | | | | | | | | | | +--Clostridium sp. CAG:533 (1) | | | | | | | | | | | +--Clostridium sp. CAG:269 (1) | | | | | | | | | | | +--Clostridium sp. CAG:58 (1) | | | | | | | | | | | +--Clostridium sp. CAG:302 (1) | | | | | | | | | | | +--Clostridium sp. CAG:433 (1) | | | | | | | | | | | +--Clostridium leptum CAG:27 (1) | | | | | | | | | | | +--Clostridium sp. CAG:914 (1) | | | | | | | | | | | +--Clostridium colicanis 209318 (1) | | | | | | | | | | | +--Clostridium hathewayi CAG:224 (1) | | | | | | | | | | | +--Clostridium baratii str. Sullivan (1) | | | | | | | | | | | +--Clostridium sp. CAG:277 (1) | | | | | | | | | | | +--Clostridium sp. CAG:632 (1) | | | | | | | | | | | +--Clostridium sp. CAG:793 (1) | | | | | | | | | | | +--Clostridium sp. CAG:571 (1) | | | | | | | | | | | +--Clostridium collagenovorans DSM 3089 (1) | | | | | | | | | | | +--Clostridium sp. CAG:710 (1) | | | | | | | | | | | +--Clostridium bartlettii CAG:1329 (1) | | | | | | | | | | | +--Clostridium sp. CAG:245 (1) | | | | | | | | | | | +--Clostridium sp. CAG:411 (1) | | | | | | | | | | | +--Clostridium sp. CAG:354 (1) | | | | | | | | | +--Caldisalinibacter kiritimatiensis (1) | | | | | | | | | +--Geosporobacter ferrireducens (1) | | | | | | | | | +--Paramaledivibacter (2) | | | | | | | | | | | +--Paramaledivibacter caminithermalis DSM 15212 (2) | | | | | | | | | +--Clostridium sp. USBA 49 (1) | | | | | | | | | +--Clostridium sp. W14A (1) | | | | | | | | | +--Lactonifactor (1) | | | | | | | | | | | +--Lactonifactor longoviformis DSM 17459 (1) | | | | | | | | | +--Clostridium sp. N3C (1) | | | | | | | | | +--Fervidicella (2) | | | | | | | | | | | +--Fervidicella metallireducens AeB (2) | | | | | | | | | +--Butyricicoccus (1) | | | | | | | | | | | +--Butyricicoccus pullicaecorum 1.2 (1) | | | | | | | | | +--Geosporobacter (1) | | | | | | | | | | | +--Geosporobacter subterraneus DSM 17957 (1) | | | | | | | | | +--Clostridium sp. HMP27 (5) | | | | | | | | | +--Clostridium tepidum (2) | | | | | | | | | +--Clostridium sp. SCN 57-10 (1) | | | | | | | | | +--Clostridium sp. FS41 (1) | | | | | | | | | +--Clostridiaceae bacterium BRH_c20a (3) | | | | | | | +--Clostridialesincertaesedis (4) | | | | | | | | | +--ClostridialesFamilyXVI.IncertaeSedis (1) | | | | | | | | | | | +--Carboxydocella (1) | | | | | | | | | | | +--Carboxydocella sporoproducens DSM 16521 (1) | | | | | | | | | +--ClostridialesFamilyXIII.IncertaeSedis (3) | | | | | | | | | +--Clostridiales bacterium S5-A14a (1) | | | | | | | | | +--Eubacterium brachy ATCC 33089 (1) | | | | | | | | | +--Eubacterium nodatum ATCC 33099 (1) | | | | | | | +--Syntrophomonadaceae (1) | | | | | | | | | +--Syntrophomonas (1) | | | | | | | | | +--Syntrophomonas zehnderi OL-4 (1) | | | | | | | +--Lachnospiraceae (58) | | | | | | | | | +--Lachnospiraceae bacterium 10-1 (1) | | | | | | | | | +--Blautia sp. An249 (1) | | | | | | | | | +--Lachnospiraceae bacterium (1) | | | | | | | | | +--Roseburia sp. 499 (1) | | | | | | | | | +--Lachnospiraceae bacterium CAG:364 (1) | | | | | | | | | +--Blautia sp. YL58 (1) | | | | | | | | | +--Anaerobium acetethylicum (1) | | | | | | | | | +--Dorea (4) | | | | | | | | | | | +--Dorea sp. CAG:105 (1) | | | | | | | | | | | +--Dorea sp. CAG:317 (1) | | | | | | | | | | | +--Dorea formicigenerans CAG:28 (1) | | | | | | | | | | | +--Dorea longicatena CAG:42 (1) | | | | | | | | | +--Lachnobacterium (1) | | | | | | | | | | | +--Lachnobacterium bovis DSM 14045 (1) | | | | | | | | | +--Pseudobutyrivibrio (1) | | | | | | | | | | | +--Pseudobutyrivibrio xylanivorans DSM 14809 (1) | | | | | | | | | +--Anaerocolumna (2) | | | | | | | | | | | +--Anaerocolumna jejuensis DSM 15929 (1) | | | | | | | | | | | +--Anaerocolumna xylanovorans DSM 12503 (1) | | | | | | | | | +--Hespellia (1) | | | | | | | | | | | +--Hespellia stercorisuis DSM 15480 (1) | | | | | | | | | +--Anaerostipes (1) | | | | | | | | | | | +--Anaerostipes sp. CAG:276 (1) | | | | | | | | | +--Lachnospiraceae bacterium CAG:215 (1) | | | | | | | | | +--Anaerostipes sp. 992a (1) | | | | | | | | | +--Lachnoclostridium sp. An169 (1) | | | | | | | | | +--Roseburia sp. 831b (1) | | | | | | | | | +--Lachnoclostridium sp. An118 (1) | | | | | | | | | +--Lachnoclostridium sp. An196 (1) | | | | | | | | | +--Lachnoclostridium sp. An298 (1) | | | | | | | | | +--Lachnoclostridium sp. YL32 (1) | | | | | | | | | +--Blautia sp. An46 (1) | | | | | | | | | +--Lachnospiraceae bacterium M18-1 (1) | | | | | | | | | +--Lachnoclostridium sp. An131 (1) | | | | | | | | | +--Roseburia (9) | | | | | | | | | | | +--Roseburia sp. CAG:50 (1) | | | | | | | | | | | +--Roseburia inulinivorans CAG:15 (1) | | | | | | | | | | | +--Roseburia sp. CAG:45 (1) | | | | | | | | | | | +--Roseburia sp. CAG:197 (1) | | | | | | | | | | | +--Roseburia sp. CAG:303 (1) | | | | | | | | | | | +--Roseburia sp. CAG:100 (1) | | | | | | | | | | | +--Roseburia sp. CAG:18 (1) | | | | | | | | | | | +--Roseburia sp. CAG:309 (1) | | | | | | | | | | | +--Roseburia sp. CAG:182 (1) | | | | | | | | | +--Lachnospiraceae bacterium 3-2 (1) | | | | | | | | | +--Coprococcus (2) | | | | | | | | | | | +--Coprococcus eutactus CAG:665 (1) | | | | | | | | | | | +--Coprococcus comes CAG:19 (1) | | | | | | | | | +--Dorea sp. 42_8 (1) | | | | | | | | | +--Lachnospiraceae bacterium JC7 (1) | | | | | | | | | +--Butyrivibrio (2) | | | | | | | | | | | +--Butyrivibrio crossotus CAG:259 (1) | | | | | | | | | | | +--Butyrivibrio sp. CAG:318 (1) | | | | | | | | | +--Lachnospiraceae bacterium COE1 (1) | | | | | | | | | +--Anaerosporobacter (1) | | | | | | | | | | | +--Anaerosporobacter mobilis DSM 15930 (1) | | | | | | | | | +--Parasporobacterium (1) | | | | | | | | | | | +--Parasporobacterium paucivorans DSM 15970 (1) | | | | | | | | | +--Lachnoclostridium sp. An14 (1) | | | | | | | | | +--Lachnoclostridium sp. An76 (1) | | | | | | | | | +--Robinsoniella sp. RHS (1) | | | | | | | | | +--Herbinix luporum (1) | | | | | | | | | +--Dorea sp. 5-2 (1) | | | | | | | | | +--Blautia (5) | | | | | | | | | | | +--Blautia sp. CAG:237 (1) | | | | | | | | | | | +--Blautia sp. CAG:257 (1) | | | | | | | | | | | +--Blautia sp. CAG:37 (1) | | | | | | | | | | | +--Blautia sp. CAG:52 (1) | | | | | | | | | | | +--Blautia hydrogenotrophica CAG:147 (1) | | | | | | | | | +--Roseburia sp. 40_7 (1) | | | | | | | +--Oscillospiraceae (4) | | | | | | | | | +--Oscillibacter sp. 1-3 (1) | | | | | | | | | +--Oscillibacter (1) | | | | | | | | | | | +--Oscillibacter sp. CAG:155 (1) | | | | | | | | | +--Oscillibacter sp. 57_20 (1) | | | | | | | | | +--Oscillibacter sp. KLE 1745 (1) | | | | | | | +--Peptococcaceae (29) | | | | | | | | | +--Desulfitobacterium (1) | | | | | | | | | | | +--Desulfitobacterium dichloroeliminans LMG P-21439 (1) | | | | | | | | | +--Desulfotomaculum sp. 46_80 (1) | | | | | | | | | +--Dehalobacter sp. CF (1) | | | | | | | | | +--Desulfotomaculum (7) | | | | | | | | | | | +--Desulfotomaculum putei DSM 12395 (2) | | | | | | | | | | | +--Desulfotomaculum hydrothermale Lam5 = DSM 18033 (2) | | | | | | | | | | | +--Desulfotomaculum australicum DSM 11792 (1) | | | | | | | | | | | +--Desulfotomaculum aeronauticum DSM 10349 (2) | | | | | | | | | +--Desulfosporosinus sp. OL (1) | | | | | | | | | +--Desulfotomaculum copahuensis (1) | | | | | | | | | +--Peptococcaceae bacterium BRH_c4b (1) | | | | | | | | | +--Peptococcaceae bacterium BRH_c8a (2) | | | | | | | | | +--Peptococcaceae bacterium SCADC1_2_3 (1) | | | | | | | | | +--Desulfosporosinus (1) | | | | | | | | | | | +--Desulfosporosinus lacus DSM 15449 (1) | | | | | | | | | +--Desulfotomaculum sp. 46_296 (1) | | | | | | | | | +--Desulfonispora (2) | | | | | | | | | | | +--Desulfonispora thiosulfatigenes DSM 11270 (2) | | | | | | | | | +--Peptococcaceae bacterium 1109 (1) | | | | | | | | | +--Desulfosporosinus sp. I2 (1) | | | | | | | | | +--Desulfosporosinus sp. BRH_c37 (1) | | | | | | | | | +--Desulfotomaculum ferrireducens (2) | | | | | | | | | +--Desulfosporosinus sp. Tol-M (1) | | | | | | | | | +--Peptococcaceae bacterium BRH_c4a (1) | | | | | | | | | +--Peptococcaceae bacterium BRH_c23 (1) | | | | | | | | | +--Desulfitibacter sp. BRH_c19 (1) | | | | | | | +--unclassifiedClostridiales (30) | | | | | | | | | +--Gottschalkia (1) | | | | | | | | | | | +--[Clostridium] acidurici 9a (1) | | | | | | | | | +--Proteiniborus sp. DW1 (1) | | | | | | | | | +--Epulopiscium sp. SCG-B10WGA-EpuloA2 (1) | | | | | | | | | +--Clostridiales bacterium CHKCI006 (1) | | | | | | | | | +--Clostridiales bacterium KLE1615 (1) | | | | | | | | | +--Clostridiales bacterium 38-18 (1) | | | | | | | | | +--Clostridiales bacterium 38_11 (1) | | | | | | | | | +--Clostridiales bacterium GWF2_36_10 (1) | | | | | | | | | +--Epulopiscium sp. Nele67-Bin004 (1) | | | | | | | | | +--Clostridiales bacterium KA00274 (1) | | | | | | | | | +--Clostridiales bacterium GWE2_32_10 (1) | | | | | | | | | +--Epulopiscium sp. AS2M-Bin002 (1) | | | | | | | | | +--Clostridiales bacterium 43-6 (2) | | | | | | | | | +--Intestinimonas butyriciproducens (1) | | | | | | | | | +--Epulopiscium sp. Nuni2H_MBin001 (1) | | | | | | | | | +--Clostridiales bacterium GWB2_37_7 (1) | | | | | | | | | +--Clostridiales bacterium PH28_bin88 (1) | | | | | | | | | +--Epulopiscium sp. SCG-C07WGA-EpuloA2 (1) | | | | | | | | | +--Flavonifractor (1) | | | | | | | | | | | +--Flavonifractor plautii ATCC 29863 (1) | | | | | | | | | +--Epulopiscium sp. Nuni2H_MBin003 (1) | | | | | | | | | +--Clostridiales bacterium CHKCI001 (1) | | | | | | | | | +--Clostridiales bacterium 42_27 (1) | | | | | | | | | +--Clostridiales bacterium GWD2_32_59 (1) | | | | | | | | | +--Clostridiales bacterium 41_12_two_minus (1) | | | | | | | | | +--unclassifiedClostridiales(miscellaneous) (2) | | | | | | | | | | | +--Clostridiales bacterium oral taxon 876 str. F0540 (2) | | | | | | | | | +--Clostridiales bacterium KA00134 (1) | | | | | | | | | +--Epulopiscium sp. Nele67-Bin005 (1) | | | | | | | | | +--Epulopiscium sp. SCG-B11WGA-EpuloA1 (1) | | | | | | | +--Gracilibacteraceae (1) | | | | | | | +--Gracilibacter sp. BRH_c7a (1) | | | | | +--Firmicutes bacterium CAG:114 (1) | | | | | +--Firmicutes bacterium CAG:102 (1) | | | | | +--Firmicutes bacterium CAG:555 (1) | | | | | +--Firmicutes bacterium CAG:822 (1) | | | +--Nitrospinae/Tectomicrobiagroup (4) | | | | | +--Nitrospinae (3) | | | | | | | +--Nitrospinae bacterium RIFCSPLOWO2_02_39_17 (2) | | | | | | | +--Nitrospinia (1) | | | | | | | +--Nitrospinales (1) | | | | | | | +--Nitrospinaceae (1) | | | | | | | +--Nitrospina (1) | | | | | | | +--Nitrospina gracilis 3/211 (1) | | | | | +--CandidatusTectomicrobia (1) | | | | | +--Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37 (1) | | | +--FCBgroup (9) | | | +--CandidatusHydrogenedentes (1) | | | | | +--Candidatus Hydrogenedentes bacterium CG1_02_42_14 (1) | | | +--CandidatusCloacimonetes (2) | | | | | +--Candidatus Cloacimonas sp. SDB (1) | | | | | +--Candidatus Cloacimonas sp. 4484_209 (1) | | | +--CandidatusLatescibacteria (1) | | | | | +--Latescibacteria bacterium DG_63 (1) | | | +--Bacteroidetes/Chlorobigroup (4) | | | | | +--Ignavibacteriae (2) | | | | | | | +--Ignavibacteria (2) | | | | | | | +--Ignavibacteria bacterium GWA2_54_16 (1) | | | | | | | +--Ignavibacteria bacterium RIFCSPLOWO2_12_FULL_56_21 (1) | | | | | +--Bacteroidetes (2) | | | | | +--Sphingobacteriia (1) | | | | | | | +--Sphingobacteriales (1) | | | | | | | +--Sphingobacteriaceae (1) | | | | | | | +--Sphingobacterium (1) | | | | | | | +--Sphingobacterium faecium PCAi_F2.5 (1) | | | | | +--Bacteroidia (1) | | | | | +--Bacteroidales (1) | | | | | +--Bacteroidaceae (1) | | | | | +--Bacteroides (1) | | | | | +--Bacteroides pectinophilus CAG:437 (1) | | | +--Gemmatimonadetes (1) | | | +--Gemmatimonadetes bacterium 13_2_20CM_2_69_23 (1) | +--Plautia stali symbiont (1)