# Species tree for RF00006 # Generated from Rfam version 14.10 | +--Eukaryota (637) | +--Metazoa (631) | | | +--Brachiopoda (4) | | | | | +--Linguliformea (4) | | | | | +--Lingulata (4) | | | | | +--Lingulida (4) | | | | | +--Linguloidea (4) | | | | | +--Lingulidae (4) | | | | | +--Lingula anatina (4) | | | +--Chordata (532) | | | | | +--Cephalochordata (7) | | | | | | | +--Branchiostomidae (7) | | | | | | | +--Branchiostoma floridae (Florida lancelet) (7) | | | | | +--Tunicata (7) | | | | | | | +--Ascidiacea (7) | | | | | | | +--Enterogona (7) | | | | | | | +--Phlebobranchia (7) | | | | | | | +--Cionidae (7) | | | | | | | +--Ciona savignyi (3) | | | | | | | +--Ciona intestinalis (4) | | | | | +--Craniata (518) | | | | | +--Vertebrata (518) | | | | | +--Euteleostomi (517) | | | | | | | +--Lepidosauria (17) | | | | | | | | | +--Squamata (17) | | | | | | | | | +--Scleroglossa (7) | | | | | | | | | | | +--Serpentes (7) | | | | | | | | | | | +--Colubroidea (7) | | | | | | | | | | | +--Elapidae (7) | | | | | | | | | | | +--Elapinae (7) | | | | | | | | | | | +--Ophiophagus hannah (king cobra) (7) | | | | | | | | | +--Iguania (10) | | | | | | | | | +--Iguanidae (10) | | | | | | | | | +--Polychrotinae (10) | | | | | | | | | +--Anolis carolinensis (green anole) (10) | | | | | | | +--Actinopterygii (68) | | | | | | | | | +--Neopterygii (68) | | | | | | | | | +--Teleostei (65) | | | | | | | | | | | +--Osteoglossomorpha (2) | | | | | | | | | | | | | +--Osteoglossiformes (2) | | | | | | | | | | | | | +--Osteoglossidae (2) | | | | | | | | | | | | | +--Scleropages formosus (Asian bonytongue) (2) | | | | | | | | | | | +--Euteleostei (44) | | | | | | | | | | | | | +--Protacanthopterygii (6) | | | | | | | | | | | | | | | +--Salmoniformes (6) | | | | | | | | | | | | | | | +--Salmonidae (6) | | | | | | | | | | | | | | | +--Salmoninae (6) | | | | | | | | | | | | | | | +--Salmo salar (Atlantic salmon) (6) | | | | | | | | | | | | | +--Neoteleostei (38) | | | | | | | | | | | | | +--Acanthomorpha (38) | | | | | | | | | | | | | +--Acanthopterygii (38) | | | | | | | | | | | | | +--Percomorpha (38) | | | | | | | | | | | | | +--Perciformes (5) | | | | | | | | | | | | | | | +--Percoidei (5) | | | | | | | | | | | | | | | +--Sciaenidae (5) | | | | | | | | | | | | | | | +--Larimichthys crocea (5) | | | | | | | | | | | | | +--Gasterosteiformes (6) | | | | | | | | | | | | | | | +--Gasterosteidae (6) | | | | | | | | | | | | | | | +--Gasterosteus aculeatus (three-spined stickleback) (6) | | | | | | | | | | | | | +--Tetraodontiformes (12) | | | | | | | | | | | | | | | +--Tetradontoidea (12) | | | | | | | | | | | | | | | +--Tetraodontidae (12) | | | | | | | | | | | | | | | +--Takifugu rubripes (8) | | | | | | | | | | | | | | | +--Tetraodon nigroviridis (4) | | | | | | | | | | | | | +--Atherinomorpha (15) | | | | | | | | | | | | | +--Beloniformes (8) | | | | | | | | | | | | | | | +--Adrianichthyidae (8) | | | | | | | | | | | | | | | +--Oryziinae (8) | | | | | | | | | | | | | | | +--Oryzias latipes (Japanese medaka) (8) | | | | | | | | | | | | | +--Cyprinodontiformes (7) | | | | | | | | | | | | | +--Poeciliidae (7) | | | | | | | | | | | | | +--Poeciliinae (7) | | | | | | | | | | | | | +--Xiphophorus maculatus (southern platyfish) (2) | | | | | | | | | | | | | +--Poecilia formosa (5) | | | | | | | | | | | +--Ostariophysi (19) | | | | | | | | | | | +--Characiformes (8) | | | | | | | | | | | | | +--Characidae (8) | | | | | | | | | | | | | +--Characidaeincertaesedis (8) | | | | | | | | | | | | | +--Astyanaxclade (8) | | | | | | | | | | | | | +--Astyanax mexicanus (Mexican tetra) (8) | | | | | | | | | | | +--Cypriniformes (11) | | | | | | | | | | | +--Cyprinidae (11) | | | | | | | | | | | +--Danio rerio (zebrafish) (11) | | | | | | | | | +--Semionotiformes (3) | | | | | | | | | +--Lepisosteidae (3) | | | | | | | | | +--Lepisosteus oculatus (spotted gar) (3) | | | | | | | +--Coelacanthiformes (3) | | | | | | | | | +--Coelacanthidae (3) | | | | | | | | | +--Latimeria menadoensis (Menado coelacanth) (1) | | | | | | | | | +--Latimeria chalumnae (coelacanth) (2) | | | | | | | +--Amphibia (18) | | | | | | | | | +--Batrachia (18) | | | | | | | | | +--Anura (18) | | | | | | | | | +--Mesobatrachia (16) | | | | | | | | | | | +--Pipoidea (16) | | | | | | | | | | | +--Pipidae (16) | | | | | | | | | | | +--Xenopodinae (16) | | | | | | | | | | | +--Xenopus (16) | | | | | | | | | | | +--Xenopus (Silurana) tropicalis (western clawed frog) (6) | | | | | | | | | | | +--Xenopus laevis (African clawed frog) (10) | | | | | | | | | +--Neobatrachia (2) | | | | | | | | | +--Ranoidea (2) | | | | | | | | | +--Ranidae (2) | | | | | | | | | +--Raninae (2) | | | | | | | | | +--Rana (2) | | | | | | | | | +--Rana catesbeiana (bullfrog) (2) | | | | | | | +--Mammalia (391) | | | | | | | | | +--Monotremata (2) | | | | | | | | | | | +--Ornithorhynchidae (2) | | | | | | | | | | | +--Ornithorhynchus anatinus (platypus) (2) | | | | | | | | | +--Metatheria (16) | | | | | | | | | | | +--Didelphimorphia (15) | | | | | | | | | | | | | +--Didelphidae (15) | | | | | | | | | | | | | +--Monodelphis domestica (gray short-tailed opossum) (15) | | | | | | | | | | | +--Dasyuromorphia (1) | | | | | | | | | | | +--Dasyuridae (1) | | | | | | | | | | | +--Sarcophilus harrisii (Tasmanian devil) (1) | | | | | | | | | +--Eutheria (373) | | | | | | | | | +--Afrotheria (5) | | | | | | | | | | | +--Proboscidea (3) | | | | | | | | | | | | | +--Elephantidae (3) | | | | | | | | | | | | | +--Loxodonta africana (African savanna elephant) (3) | | | | | | | | | | | +--Tenrecidae (2) | | | | | | | | | | | +--Tenrecinae (2) | | | | | | | | | | | +--Echinops telfairi (small Madagascar hedgehog) (2) | | | | | | | | | +--Euarchontoglires (296) | | | | | | | | | | | +--Primates (98) | | | | | | | | | | | | | +--Haplorrhini (89) | | | | | | | | | | | | | | | +--Catarrhini (73) | | | | | | | | | | | | | | | | | +--Hominidae (42) | | | | | | | | | | | | | | | | | | | +--Pongo abelii (Sumatran orangutan) (7) | | | | | | | | | | | | | | | | | | | +--Homo sapiens (human) (14) | | | | | | | | | | | | | | | | | | | +--Gorilla gorilla gorilla (western lowland gorilla) (8) | | | | | | | | | | | | | | | | | | | +--Pan troglodytes (chimpanzee) (13) | | | | | | | | | | | | | | | | | +--Hylobatidae (6) | | | | | | | | | | | | | | | | | | | +--Nomascus leucogenys (Northern white-cheeked gibbon) (6) | | | | | | | | | | | | | | | | | +--Cercopithecidae (25) | | | | | | | | | | | | | | | | | +--Cercopithecinae (25) | | | | | | | | | | | | | | | | | +--Papio anubis (Olive baboon) (8) | | | | | | | | | | | | | | | | | +--Chlorocebus sabaeus (8) | | | | | | | | | | | | | | | | | +--Macaca mulatta (Rhesus monkey) (9) | | | | | | | | | | | | | | | +--Platyrrhini (16) | | | | | | | | | | | | | | | +--Cebidae (16) | | | | | | | | | | | | | | | +--Callitrichinae (16) | | | | | | | | | | | | | | | +--Callithrix jacchus (white-tufted-ear marmoset) (16) | | | | | | | | | | | | | +--Strepsirrhini (9) | | | | | | | | | | | | | +--Lemuriformes (1) | | | | | | | | | | | | | | | +--Cheirogaleidae (1) | | | | | | | | | | | | | | | +--Microcebus murinus (gray mouse lemur) (1) | | | | | | | | | | | | | +--Lorisiformes (8) | | | | | | | | | | | | | +--Galagidae (8) | | | | | | | | | | | | | +--Otolemur garnettii (small-eared galago) (8) | | | | | | | | | | | +--Scandentia (4) | | | | | | | | | | | | | +--Tupaiidae (4) | | | | | | | | | | | | | +--Tupaia belangeri (northern tree shrew) (2) | | | | | | | | | | | | | +--Tupaia chinensis (Chinese tree shrew) (2) | | | | | | | | | | | +--Glires (194) | | | | | | | | | | | +--Rodentia (184) | | | | | | | | | | | | | +--Hystricognathi (168) | | | | | | | | | | | | | | | +--Caviidae (163) | | | | | | | | | | | | | | | | | +--Cavia porcellus (Domestic guinea pig) (163) | | | | | | | | | | | | | | | +--Bathyergidae (5) | | | | | | | | | | | | | | | +--Fukomys damarensis (Damara mole-rat) (2) | | | | | | | | | | | | | | | +--Heterocephalus glaber (naked mole-rat) (3) | | | | | | | | | | | | | +--Sciurognathi (16) | | | | | | | | | | | | | +--Muroidea (11) | | | | | | | | | | | | | | | +--Muridae (5) | | | | | | | | | | | | | | | | | +--Murinae (5) | | | | | | | | | | | | | | | | | +--Rattus norvegicus (Norway rat) (2) | | | | | | | | | | | | | | | | | +--Mus (3) | | | | | | | | | | | | | | | | | +--Mus musculus (house mouse) (3) | | | | | | | | | | | | | | | +--Cricetidae (6) | | | | | | | | | | | | | | | +--Cricetinae (5) | | | | | | | | | | | | | | | | | +--Cricetulus griseus (Chinese hamster) (2) | | | | | | | | | | | | | | | | | +--Mesocricetus auratus (golden hamster) (3) | | | | | | | | | | | | | | | +--Neotominae (1) | | | | | | | | | | | | | | | +--Neotoma lepida (desert woodrat) (1) | | | | | | | | | | | | | +--Sciuridae (4) | | | | | | | | | | | | | | | +--Xerinae (4) | | | | | | | | | | | | | | | +--Marmotini (4) | | | | | | | | | | | | | | | +--Spermophilus tridecemlineatus (thirteen-lined ground squirrel) (4) | | | | | | | | | | | | | +--Heteromyidae (1) | | | | | | | | | | | | | +--Dipodomyinae (1) | | | | | | | | | | | | | +--Dipodomys ordii (Ord's kangaroo rat) (1) | | | | | | | | | | | +--Lagomorpha (10) | | | | | | | | | | | +--Leporidae (8) | | | | | | | | | | | | | +--Oryctolagus cuniculus (rabbit) (8) | | | | | | | | | | | +--Ochotonidae (2) | | | | | | | | | | | +--Ochotona princeps (American pika) (2) | | | | | | | | | +--Laurasiatheria (72) | | | | | | | | | +--Carnivora (7) | | | | | | | | | | | +--Feliformia (4) | | | | | | | | | | | | | +--Felidae (4) | | | | | | | | | | | | | +--Felinae (4) | | | | | | | | | | | | | +--Felis catus (domestic cat) (4) | | | | | | | | | | | +--Caniformia (3) | | | | | | | | | | | +--Ursidae (1) | | | | | | | | | | | | | +--Ailuropoda melanoleuca (giant panda) (1) | | | | | | | | | | | +--Canidae (2) | | | | | | | | | | | +--Canis lupus familiaris (dog) (2) | | | | | | | | | +--Cetartiodactyla (23) | | | | | | | | | | | +--Tylopoda (2) | | | | | | | | | | | | | +--Camelidae (2) | | | | | | | | | | | | | +--Camelus ferus (Wild Bactrian camel) (2) | | | | | | | | | | | +--Ruminantia (19) | | | | | | | | | | | | | +--Pecora (19) | | | | | | | | | | | | | +--Bovidae (19) | | | | | | | | | | | | | +--Caprinae (9) | | | | | | | | | | | | | | | +--Ovis aries (sheep) (9) | | | | | | | | | | | | | +--Bovinae (10) | | | | | | | | | | | | | +--Bos taurus (cattle) (10) | | | | | | | | | | | +--Suina (2) | | | | | | | | | | | +--Suidae (2) | | | | | | | | | | | +--Sus scrofa (pig) (2) | | | | | | | | | +--Insectivora (3) | | | | | | | | | | | +--Soricidae (1) | | | | | | | | | | | | | +--Soricinae (1) | | | | | | | | | | | | | +--Sorex araneus (European shrew) (1) | | | | | | | | | | | +--Erinaceidae (2) | | | | | | | | | | | +--Erinaceinae (2) | | | | | | | | | | | +--Erinaceus europaeus (western European hedgehog) (2) | | | | | | | | | +--Perissodactyla (4) | | | | | | | | | | | +--Equidae (4) | | | | | | | | | | | +--Equus caballus (horse) (4) | | | | | | | | | +--Chiroptera (35) | | | | | | | | | +--Microchiroptera (32) | | | | | | | | | | | +--Vespertilionidae (32) | | | | | | | | | | | +--Myotis lucifugus (little brown bat) (12) | | | | | | | | | | | +--Myotis davidii (10) | | | | | | | | | | | +--Myotis brandtii (10) | | | | | | | | | +--Megachiroptera (3) | | | | | | | | | +--Pteropodidae (3) | | | | | | | | | +--Pteropodinae (3) | | | | | | | | | +--Pteropus alecto (black flying fox) (3) | | | | | | | +--Testudines (4) | | | | | | | | | +--Cryptodira (4) | | | | | | | | | +--Chelonioidea (4) | | | | | | | | | +--Cheloniidae (4) | | | | | | | | | +--Chelonia mydas (green seaturtle) (4) | | | | | | | +--Archosauria (16) | | | | | | | +--Dinosauria (16) | | | | | | | +--Saurischia (16) | | | | | | | +--Theropoda (16) | | | | | | | +--Coelurosauria (16) | | | | | | | +--Aves (16) | | | | | | | +--Palaeognathae (1) | | | | | | | | | +--Struthioniformes (1) | | | | | | | | | +--Struthionidae (1) | | | | | | | | | +--Struthio camelus australis (1) | | | | | | | +--Neognathae (15) | | | | | | | +--Podicipediformes (1) | | | | | | | | | +--Podicipedidae (1) | | | | | | | | | +--Podiceps cristatus (great crested grebe) (1) | | | | | | | +--Phoenicopteriformes (2) | | | | | | | | | +--Phoenicopteridae (2) | | | | | | | | | +--Phoenicopterus ruber ruber (2) | | | | | | | +--Anseriformes (1) | | | | | | | | | +--Anatidae (1) | | | | | | | | | +--Anas platyrhynchos (1) | | | | | | | +--Musophagiformes (1) | | | | | | | | | +--Musophagidae (1) | | | | | | | | | +--Tauraco erythrolophus (red-crested turaco) (1) | | | | | | | +--Galliformes (4) | | | | | | | | | +--Phasianidae (4) | | | | | | | | | +--Meleagridinae (1) | | | | | | | | | | | +--Meleagris gallopavo (turkey) (1) | | | | | | | | | +--Phasianinae (3) | | | | | | | | | +--Gallus gallus (chicken) (3) | | | | | | | +--Gruiformes (4) | | | | | | | | | +--Gruidae (2) | | | | | | | | | | | +--Balearica pavonina gibbericeps (2) | | | | | | | | | +--Otididae (1) | | | | | | | | | | | +--Chlamydotis undulata macqueenii (1) | | | | | | | | | +--Mesitornithidae (1) | | | | | | | | | +--Mesitornis unicolor (brown roatelo) (1) | | | | | | | +--Apodiformes (2) | | | | | | | +--Apodidae (2) | | | | | | | +--Chaetura pelagica (chimney swift) (2) | | | | | +--Chondrichthyes (1) | | | | | +--Holocephali (1) | | | | | +--Chimaeriformes (1) | | | | | +--Callorhinchidae (1) | | | | | +--Callorhinchus milii (ghost shark) (1) | | | +--Arthropoda (18) | | | | | +--Myriapoda (5) | | | | | | | +--Chilopoda (5) | | | | | | | +--Pleurostigmophora (5) | | | | | | | +--Geophilomorpha (5) | | | | | | | +--Linotaeniidae (5) | | | | | | | +--Strigamia maritima (5) | | | | | +--Chelicerata (13) | | | | | +--Arachnida (13) | | | | | +--Araneae (13) | | | | | +--Araneomorphae (13) | | | | | +--Entelegynae (13) | | | | | +--Eresoidea (13) | | | | | +--Eresidae (13) | | | | | +--Stegodyphus mimosarum (13) | | | +--Annelida (7) | | | | | +--Clitellata (7) | | | | | +--Hirudinida (7) | | | | | +--Hirudinea (7) | | | | | +--Rhynchobdellida (7) | | | | | +--Glossiphoniidae (7) | | | | | +--Helobdella robusta (7) | | | +--Mollusca (21) | | | | | +--Gastropoda (7) | | | | | | | +--Patellogastropoda (7) | | | | | | | +--Lottioidea (7) | | | | | | | +--Lottiidae (7) | | | | | | | +--Lottia gigantea (7) | | | | | +--Cephalopoda (7) | | | | | | | +--Coleoidea (7) | | | | | | | +--Neocoleoidea (7) | | | | | | | +--Octopodiformes (7) | | | | | | | +--Octopoda (7) | | | | | | | +--Incirrata (7) | | | | | | | +--Octopodidae (7) | | | | | | | +--Octopus bimaculoides (7) | | | | | +--Bivalvia (7) | | | | | +--Pteriomorphia (7) | | | | | +--Ostreoida (7) | | | | | +--Ostreoidea (7) | | | | | +--Ostreidae (7) | | | | | +--Crassostrea gigas (Pacific oyster) (7) | | | +--Echinodermata (23) | | | | | +--Eleutherozoa (23) | | | | | +--Echinozoa (23) | | | | | +--Echinoidea (23) | | | | | +--Euechinoidea (23) | | | | | +--Echinacea (23) | | | | | +--Echinoida (23) | | | | | +--Strongylocentrotidae (23) | | | | | +--Strongylocentrotus purpuratus (23) | | | +--Platyhelminthes (20) | | | | | +--Turbellaria (20) | | | | | +--Macrostomorpha (20) | | | | | +--Macrostomida (20) | | | | | +--Macrostomidae (20) | | | | | +--Macrostomum lignano (20) | | | +--Porifera (6) | | | +--Demospongiae (6) | | | +--Ceractinomorpha (6) | | | +--Haplosclerida (6) | | | +--Niphatidae (6) | | | +--Amphimedon queenslandica (6) | +--Ichthyosporea (1) | | | +--Capsaspora owczarzaki ATCC 30864 (1) | +--Fungi (1) | | | +--Dikarya (1) | | | +--Basidiomycota (1) | | | +--Agaricomycotina (1) | | | +--Agaricomycetes (1) | | | +--Polyporales (1) | | | +--Postia placenta Mad-698-R (1) | +--Amoebozoa (2) | | | +--Discosea (2) | | | +--Longamoebia (2) | | | +--Centramoebida (2) | | | +--Acanthamoebidae (2) | | | +--Acanthamoeba (2) | | | +--Acanthamoeba castellanii str. Neff (2) | +--Opisthokonta (2) | +--Fungi (2) | +--Dikarya (2) | +--Basidiomycota (2) | +--Agaricomycotina (2) | +--Agaricomycetes (2) | +--Agaricomycetesincertaesedis (1) | | | +--Polyporales (1) | | | +--Polyporaceae (1) | | | +--Dichomitus (1) | | | +--Dichomitus squalens LYAD-421 SS1 (1) | +--Agaricomycetidae (1) | +--Agaricales (1) | +--Amanitaceae (1) | +--Amanita (1) | +--Amanita muscaria Koide BX008 (1)