# Species tree for RF04289 # Generated from Rfam version 15.00 | +--Eukaryota (229) | +--Metazoa (217) | | | +--Chordata (217) | | | +--Craniata (217) | | | +--Vertebrata (217) | | | +--Euteleostomi (217) | | | +--Actinopterygii (2) | | | | | +--Neopterygii (2) | | | | | +--Teleostei (2) | | | | | +--Anguilliformes (1) | | | | | | | +--Synaphobranchidae (1) | | | | | | | +--Synaphobranchus kaupii (Kaup's arrowtooth eel) (1) | | | | | +--Clupeomorpha (1) | | | | | +--Clupeiformes (1) | | | | | +--Clupeidae (1) | | | | | +--Clupea harengus (Atlantic herring) (1) | | | +--Mammalia (213) | | | | | +--Monotremata (1) | | | | | | | +--Ornithorhynchidae (1) | | | | | | | +--Ornithorhynchus anatinus (platypus) (1) | | | | | +--Metatheria (4) | | | | | | | +--Dasyuromorphia (1) | | | | | | | | | +--Dasyuridae (1) | | | | | | | | | +--Sarcophilus harrisii (Tasmanian devil) (1) | | | | | | | +--Didelphimorphia (1) | | | | | | | | | +--Didelphidae (1) | | | | | | | | | +--Monodelphis domestica (gray short-tailed opossum) (1) | | | | | | | +--Diprotodontia (2) | | | | | | | +--Vombatidae (1) | | | | | | | | | +--Vombatus ursinus (common wombat) (1) | | | | | | | +--Phascolarctidae (1) | | | | | | | +--Phascolarctos cinereus (koala) (1) | | | | | +--Eutheria (208) | | | | | +--Afrotheria (5) | | | | | | | +--Sirenia (2) | | | | | | | | | +--Trichechidae (2) | | | | | | | | | +--Trichechus manatus latirostris (2) | | | | | | | +--Proboscidea (1) | | | | | | | | | +--Elephantidae (1) | | | | | | | | | +--Loxodonta africana (African savanna elephant) (1) | | | | | | | +--Chrysochloridae (2) | | | | | | | +--Chrysochlorinae (2) | | | | | | | +--Chrysochloris asiatica (2) | | | | | +--Euarchontoglires (93) | | | | | | | +--Primates (49) | | | | | | | | | +--Haplorrhini (44) | | | | | | | | | | | +--Catarrhini (36) | | | | | | | | | | | | | +--Hominidae (10) | | | | | | | | | | | | | | | +--Pongo abelii (Sumatran orangutan) (2) | | | | | | | | | | | | | | | +--Gorilla gorilla gorilla (western lowland gorilla) (2) | | | | | | | | | | | | | | | +--Pan paniscus (pygmy chimpanzee) (2) | | | | | | | | | | | | | | | +--Homo sapiens (human) (2) | | | | | | | | | | | | | | | +--Pan troglodytes (chimpanzee) (2) | | | | | | | | | | | | | +--Cercopithecidae (24) | | | | | | | | | | | | | | | +--Cercopithecinae (16) | | | | | | | | | | | | | | | | | +--Papio anubis (Olive baboon) (2) | | | | | | | | | | | | | | | | | +--Theropithecus gelada (gelada baboon) (2) | | | | | | | | | | | | | | | | | +--Cercocebus atys (sooty mangabey) (2) | | | | | | | | | | | | | | | | | +--Macaca nemestrina (pig-tailed macaque) (2) | | | | | | | | | | | | | | | | | +--Chlorocebus sabaeus (2) | | | | | | | | | | | | | | | | | +--Macaca fascicularis (crab-eating macaque) (2) | | | | | | | | | | | | | | | | | +--Macaca mulatta (Rhesus monkey) (2) | | | | | | | | | | | | | | | | | +--Mandrillus leucophaeus (drill) (2) | | | | | | | | | | | | | | | +--Colobinae (8) | | | | | | | | | | | | | | | +--Colobus angolensis palliatus (2) | | | | | | | | | | | | | | | +--Rhinopithecus bieti (Black snub-nosed monkey) (2) | | | | | | | | | | | | | | | +--Piliocolobus tephrosceles (Ugandan red Colobus) (2) | | | | | | | | | | | | | | | +--Rhinopithecus roxellana (golden snub-nosed monkey) (2) | | | | | | | | | | | | | +--Hylobatidae (2) | | | | | | | | | | | | | +--Nomascus leucogenys (Northern white-cheeked gibbon) (2) | | | | | | | | | | | +--Platyrrhini (8) | | | | | | | | | | | +--Aotidae (2) | | | | | | | | | | | | | +--Aotus nancymaae (Ma's night monkey) (2) | | | | | | | | | | | +--Cebidae (6) | | | | | | | | | | | +--Saimiriinae (2) | | | | | | | | | | | | | +--Saimiri boliviensis boliviensis (Bolivian squirrel monkey) (2) | | | | | | | | | | | +--Cebinae (2) | | | | | | | | | | | | | +--Cebus apella (Tufted capuchin) (2) | | | | | | | | | | | +--Callitrichinae (2) | | | | | | | | | | | +--Callithrix jacchus (white-tufted-ear marmoset) (2) | | | | | | | | | +--Strepsirrhini (5) | | | | | | | | | +--Lemuriformes (4) | | | | | | | | | | | +--Indriidae (2) | | | | | | | | | | | | | +--Propithecus coquereli (Coquerel's sifaka) (2) | | | | | | | | | | | +--Cheirogaleidae (2) | | | | | | | | | | | +--Microcebus murinus (gray mouse lemur) (2) | | | | | | | | | +--Lorisiformes (1) | | | | | | | | | +--Galagidae (1) | | | | | | | | | +--Otolemur garnettii (small-eared galago) (1) | | | | | | | +--Scandentia (1) | | | | | | | | | +--Tupaiidae (1) | | | | | | | | | +--Tupaia chinensis (Chinese tree shrew) (1) | | | | | | | +--Glires (43) | | | | | | | +--Rodentia (43) | | | | | | | +--Hystricognathi (11) | | | | | | | | | +--Chinchillidae (3) | | | | | | | | | | | +--Chinchilla lanigera (3) | | | | | | | | | +--Caviidae (2) | | | | | | | | | | | +--Cavia porcellus (Domestic guinea pig) (2) | | | | | | | | | +--Bathyergidae (4) | | | | | | | | | | | +--Fukomys damarensis (Damara mole-rat) (2) | | | | | | | | | | | +--Heterocephalus glaber (naked mole-rat) (2) | | | | | | | | | +--Octodontidae (2) | | | | | | | | | +--Octodon degus (degu) (2) | | | | | | | +--Sciurognathi (32) | | | | | | | +--Sciuridae (12) | | | | | | | | | +--Xerinae (8) | | | | | | | | | | | +--Marmotini (8) | | | | | | | | | | | +--Marmota marmota marmota (Alpine marmot) (1) | | | | | | | | | | | +--Spermophilus tridecemlineatus (thirteen-lined ground squirrel) (2) | | | | | | | | | | | +--Spermophilus parryii (Arctic ground squirrel) (2) | | | | | | | | | | | +--Spermophilus dauricus (Daurian ground squirrel) (1) | | | | | | | | | | | +--Marmota monax (woodchuck) (2) | | | | | | | | | +--Sciurinae (4) | | | | | | | | | +--Sciurini (4) | | | | | | | | | +--Sciurus carolinensis (gray squirrel) (2) | | | | | | | | | +--Sciurus vulgaris (Eurasian red squirrel) (2) | | | | | | | +--Muroidea (15) | | | | | | | | | +--Spalacidae (2) | | | | | | | | | | | +--Spalacinae (2) | | | | | | | | | | | +--Nannospalax galili (Upper Galilee mountains blind mole rat) (2) | | | | | | | | | +--Muridae (6) | | | | | | | | | | | +--Murinae (6) | | | | | | | | | | | +--Rattus norvegicus (Norway rat) (2) | | | | | | | | | | | +--Mus (4) | | | | | | | | | | | +--Mus spicilegus (steppe mouse) (2) | | | | | | | | | | | +--Mus musculus (house mouse) (2) | | | | | | | | | +--Cricetidae (7) | | | | | | | | | +--Cricetinae (3) | | | | | | | | | | | +--Cricetulus griseus (Chinese hamster) (1) | | | | | | | | | | | +--Mesocricetus auratus (golden hamster) (2) | | | | | | | | | +--Arvicolinae (1) | | | | | | | | | | | +--Microtus ochrogaster (prairie vole) (1) | | | | | | | | | +--Neotominae (3) | | | | | | | | | +--Neotoma lepida (desert woodrat) (2) | | | | | | | | | +--Peromyscus maniculatus bairdii (prairie deer mouse) (1) | | | | | | | +--Heteromyidae (2) | | | | | | | | | +--Dipodomyinae (2) | | | | | | | | | +--Dipodomys ordii (Ord's kangaroo rat) (2) | | | | | | | +--Dipodidae (2) | | | | | | | | | +--Dipodinae (2) | | | | | | | | | +--Jaculus jaculus (lesser Egyptian jerboa) (2) | | | | | | | +--Castoridae (1) | | | | | | | +--Castor canadensis (American beaver) (1) | | | | | +--Laurasiatheria (110) | | | | | +--Carnivora (32) | | | | | | | +--Feliformia (6) | | | | | | | | | +--Hyaenidae (1) | | | | | | | | | | | +--Crocuta crocuta (spotted hyena) (1) | | | | | | | | | +--Herpestidae (1) | | | | | | | | | | | +--Suricata suricatta (meerkat) (1) | | | | | | | | | +--Felidae (4) | | | | | | | | | +--Pantherinae (1) | | | | | | | | | | | +--Panthera leo (lion) (1) | | | | | | | | | +--Felinae (2) | | | | | | | | | | | +--Felis catus (domestic cat) (1) | | | | | | | | | | | +--Lynx canadensis (Canada lynx) (1) | | | | | | | | | +--Acinonychinae (1) | | | | | | | | | +--Acinonyx jubatus (cheetah) (1) | | | | | | | +--Caniformia (26) | | | | | | | +--Otariidae (2) | | | | | | | | | +--Callorhinus ursinus (northern fur seal) (2) | | | | | | | +--Phocidae (2) | | | | | | | | | +--Monachus schauinslandi (Hawaiian monk seal) (1) | | | | | | | | | +--Leptonychotes weddellii (Weddell seal) (1) | | | | | | | +--Mustelidae (4) | | | | | | | | | +--Martinae (1) | | | | | | | | | | | +--Gulo gulo (wolverine) (1) | | | | | | | | | +--Lutrinae (1) | | | | | | | | | | | +--Enhydra lutris kenyoni (1) | | | | | | | | | +--Mustelinae (2) | | | | | | | | | +--Neovison vison (1) | | | | | | | | | +--Mustela putorius furo (domestic ferret) (1) | | | | | | | +--Ursidae (8) | | | | | | | | | +--Ursus americanus (American black bear) (2) | | | | | | | | | +--Ailuropoda melanoleuca (giant panda) (4) | | | | | | | | | +--Ursus maritimus (polar bear) (2) | | | | | | | +--Canidae (8) | | | | | | | | | +--Canis lupus dingo (dingo) (2) | | | | | | | | | +--Vulpes vulpes (red fox) (2) | | | | | | | | | +--Nyctereutes procyonoides (raccoon dog) (2) | | | | | | | | | +--Canis lupus familiaris (dog) (2) | | | | | | | +--Odobenidae (2) | | | | | | | +--Odobenus rosmarus divergens (Pacific walrus) (2) | | | | | +--Cetartiodactyla (53) | | | | | | | +--Tylopoda (5) | | | | | | | | | +--Camelidae (5) | | | | | | | | | +--Vicugna pacos (alpaca) (2) | | | | | | | | | +--Camelus dromedarius (Arabian camel) (1) | | | | | | | | | +--Camelus ferus (Wild Bactrian camel) (1) | | | | | | | | | +--Camelus bactrianus (Bactrian camel) (1) | | | | | | | +--Cetacea (22) | | | | | | | | | +--Odontoceti (16) | | | | | | | | | | | +--Monodontidae (5) | | | | | | | | | | | | | +--Monodon monoceros (narwhal) (2) | | | | | | | | | | | | | +--Delphinapterus leucas (beluga whale) (3) | | | | | | | | | | | +--Phocoenidae (2) | | | | | | | | | | | | | +--Phocoena sinus (vaquita) (2) | | | | | | | | | | | +--Physeteridae (3) | | | | | | | | | | | | | +--Physeter catodon (sperm whale) (3) | | | | | | | | | | | +--Lipotidae (2) | | | | | | | | | | | | | +--Lipotes vexillifer (Yangtze River dolphin) (2) | | | | | | | | | | | +--Delphinidae (4) | | | | | | | | | | | +--Sousa chinensis (Indo-pacific humpbacked dolphin) (2) | | | | | | | | | | | +--Tursiops truncatus (bottlenosed dolphin) (2) | | | | | | | | | +--Mysticeti (6) | | | | | | | | | +--Balaenopteridae (4) | | | | | | | | | | | +--Balaenoptera musculus (Blue whale) (2) | | | | | | | | | | | +--Balaenoptera physalus (Fin whale) (2) | | | | | | | | | +--Eschrichtiidae (2) | | | | | | | | | +--Eschrichtius robustus (grey whale) (2) | | | | | | | +--Ruminantia (24) | | | | | | | | | +--Pecora (24) | | | | | | | | | +--Bovidae (14) | | | | | | | | | | | +--Bovinae (10) | | | | | | | | | | | | | +--Bos grunniens (domestic yak) (2) | | | | | | | | | | | | | +--Bos indicus (2) | | | | | | | | | | | | | +--Bos (2) | | | | | | | | | | | | | | | +--Bos indicus x Bos taurus (hybrid cattle) (2) | | | | | | | | | | | | | +--Bos taurus (cattle) (2) | | | | | | | | | | | | | +--Bos grunniens mutus (2) | | | | | | | | | | | +--Caprinae (4) | | | | | | | | | | | +--Capra hircus (goat) (2) | | | | | | | | | | | +--Ovis aries (sheep) (2) | | | | | | | | | +--Moschidae (2) | | | | | | | | | | | +--Moschus moschiferus (Siberian musk deer) (2) | | | | | | | | | +--Cervidae (8) | | | | | | | | | +--Odocoileinae (2) | | | | | | | | | | | +--Odocoileus virginianus texanus (2) | | | | | | | | | +--Muntiacinae (2) | | | | | | | | | | | +--Muntiacus reevesi (Chinese muntjac) (2) | | | | | | | | | +--Cervinae (4) | | | | | | | | | +--Cervus elaphus yarkandensis (2) | | | | | | | | | +--Cervus elaphus hippelaphus (2) | | | | | | | +--Suina (2) | | | | | | | +--Suidae (1) | | | | | | | | | +--Sus scrofa (pig) (1) | | | | | | | +--Tayassuidae (1) | | | | | | | +--Catagonus wagneri (Chacoan peccary) (1) | | | | | +--Insectivora (4) | | | | | | | +--Talpidae (2) | | | | | | | | | +--Galemys pyrenaicus (2) | | | | | | | +--Erinaceidae (2) | | | | | | | +--Erinaceinae (2) | | | | | | | +--Erinaceus europaeus (western European hedgehog) (2) | | | | | +--Perissodactyla (8) | | | | | | | +--Equidae (6) | | | | | | | | | +--Equus caballus (horse) (4) | | | | | | | | | +--Equus asinus (ass) (2) | | | | | | | +--Rhinocerotidae (2) | | | | | | | +--Diceros bicornis minor (2) | | | | | +--Chiroptera (13) | | | | | +--Microchiroptera (10) | | | | | | | +--Rhinolophidae (3) | | | | | | | | | +--Hipposiderinae (2) | | | | | | | | | | | +--Hipposideros armiger (2) | | | | | | | | | +--Rhinolophinae (1) | | | | | | | | | +--Rhinolophus ferrumequinum (greater horseshoe bat) (1) | | | | | | | +--Phyllostomidae (2) | | | | | | | | | +--Phyllostominae (2) | | | | | | | | | +--Phyllostomus discolor (pale spear-nosed bat) (2) | | | | | | | +--Molossidae (2) | | | | | | | | | +--Molossus molossus (Pallas's mastiff bat) (2) | | | | | | | +--Vespertilionidae (3) | | | | | | | +--Eptesicus nilssoni (northern bat) (1) | | | | | | | +--Pipistrellus kuhlii (Kuhl's pipistrelle) (1) | | | | | | | +--Myotis myotis (1) | | | | | +--Megachiroptera (3) | | | | | +--Pteropodidae (3) | | | | | +--Pteropodinae (3) | | | | | +--Rousettus aegyptiacus (Egyptian rousette) (1) | | | | | +--Pteropus vampyrus (large flying fox) (1) | | | | | +--Pteropus alecto (black flying fox) (1) | | | +--Archosauria (2) | | | +--Dinosauria (2) | | | +--Saurischia (2) | | | +--Theropoda (2) | | | +--Coelurosauria (2) | | | +--Aves (2) | | | +--Neognathae (2) | | | +--Passeriformes (1) | | | | | +--Thamnophilidae (1) | | | | | +--Sakesphorus luctuosus (1) | | | +--Coraciiformes (1) | | | +--Brachypteraciidae (1) | | | +--Brachypteracias leptosomus (short-legged ground-roller) (1) | +--Opisthokonta (12) | +--Metazoa (12) | +--Eumetazoa (12) | +--Bilateria (12) | +--Deuterostomia (12) | +--Chordata (12) | +--Craniata (12) | +--Vertebrata (12) | +--Gnathostomata (12) | +--Teleostomi (12) | +--Euteleostomi (12) | +--Sarcopterygii (12) | +--Dipnotetrapodomorpha (12) | +--Tetrapoda (12) | +--Amniota (12) | +--Mammalia (12) | +--Theria (12) | +--Eutheria (12) | +--Afrotheria (2) | | | +--Tubulidentata (2) | | | +--Orycteropodidae (2) | | | +--Orycteropus (2) | | | +--Orycteropus afer afer (2) | +--Boreoeutheria (10) | +--Euarchontoglires (6) | | | +--Primates (6) | | | +--Haplorrhini (4) | | | | | +--Simiiformes (2) | | | | | | | +--Platyrrhini (2) | | | | | | | +--Cebidae (2) | | | | | | | +--Cebinae (2) | | | | | | | +--Cebus imitator (Panamanian white-faced capuchin) (2) | | | | | +--Tarsiiformes (2) | | | | | +--Tarsiidae (2) | | | | | +--Carlito syrichta (Philippine tarsier) (2) | | | +--Strepsirrhini (2) | | | +--Lemuriformes (2) | | | +--Lemuridae (2) | | | +--Prolemur simus (greater bamboo lemur) (2) | +--Laurasiatheria (4) | +--Artiodactyla (4) | +--Whippomorpha (2) | | | +--Cetacea (2) | | | +--Odontoceti (2) | | | +--Phocoenidae (2) | | | +--Neophocaena (2) | | | +--Neophocaena asiaeorientalis asiaeorientalis (yangtze finless porpoise) (2) | +--Ruminantia (2) | +--Pecora (2) | +--Bovidae (2) | +--Bovinae (2) | +--Bison (2) | +--Bison bison bison (north american plains bison) (2)