# Species tree for RF03163 # Generated from Rfam version 15.00 | +--Eukaryota (25) | | | +--Metazoa (22) | | | | | +--Nematoda (2) | | | | | | | +--Chromadorea (2) | | | | | | | +--Oxyurida (1) | | | | | | | | | +--Oxyuroidea (1) | | | | | | | | | +--Oxyuridae (1) | | | | | | | | | +--Enterobius vermicularis (1) | | | | | | | +--Rhabditida (1) | | | | | | | +--Rhabditoidea (1) | | | | | | | +--Rhabditidae (1) | | | | | | | +--Mesorhabditinae (1) | | | | | | | +--Mesorhabditis spiculigera (1) | | | | | +--Chordata (14) | | | | | | | +--Craniata (14) | | | | | | | +--Vertebrata (14) | | | | | | | +--Euteleostomi (14) | | | | | | | +--Archosauria (14) | | | | | | | +--Dinosauria (14) | | | | | | | +--Saurischia (14) | | | | | | | +--Theropoda (14) | | | | | | | +--Coelurosauria (14) | | | | | | | +--Aves (14) | | | | | | | +--Neognathae (14) | | | | | | | +--Passeriformes (14) | | | | | | | +--Corvoidea (7) | | | | | | | | | +--Irenidae (7) | | | | | | | | | +--Chloropsis hardwickii (7) | | | | | | | +--Timaliidae (7) | | | | | | | +--Pteruthius melanotis (7) | | | | | +--Arthropoda (6) | | | | | +--Hexapoda (6) | | | | | +--Insecta (6) | | | | | +--Pterygota (6) | | | | | +--Neoptera (6) | | | | | +--Endopterygota (2) | | | | | | | +--Coleoptera (2) | | | | | | | +--Polyphaga (2) | | | | | | | +--Cucujiformia (2) | | | | | | | +--Curculionidae (1) | | | | | | | | | +--Scolytinae (1) | | | | | | | | | +--Dendroctonus ponderosae (mountain pine beetle) (1) | | | | | | | +--Chrysomeloidea (1) | | | | | | | +--Chrysomelidae (1) | | | | | | | +--Bruchinae (1) | | | | | | | +--Bruchini (1) | | | | | | | +--Callosobruchus maculatus (cowpea weevil) (1) | | | | | +--Paraneoptera (4) | | | | | +--Hemiptera (4) | | | | | +--Euhemiptera (4) | | | | | +--Heteroptera (4) | | | | | +--Panheteroptera (4) | | | | | +--Cimicomorpha (4) | | | | | +--Reduviidae (3) | | | | | | | +--Triatominae (3) | | | | | | | +--Rhodnius prolixus (3) | | | | | +--Miridae (1) | | | | | +--Dicyphina (1) | | | | | +--Nesidiocoris tenuis (1) | | | +--Fungi (2) | | | | | +--Dikarya (1) | | | | | | | +--Basidiomycota (1) | | | | | | | +--Ustilaginomycotina (1) | | | | | | | +--Exobasidiomycetes (1) | | | | | | | +--Tilletiales (1) | | | | | | | +--Tilletiaceae (1) | | | | | | | +--Tilletia indica (1) | | | | | +--Microsporidia (1) | | | | | +--Enterocytozoonidae (1) | | | | | +--Enterocytozoon bieneusi H348 (1) | | | +--Opisthokonta (1) | | | +--Metazoa (1) | | | +--Eumetazoa (1) | | | +--Bilateria (1) | | | +--Protostomia (1) | | | +--Ecdysozoa (1) | | | +--Nematoda (1) | | | +--Chromadorea (1) | | | +--Rhabditida (1) | | | +--Rhabditina (1) | | | +--Rhabditomorpha (1) | | | +--Rhabditoidea (1) | | | +--Rhabditidae (1) | | | +--Rhabditidaeincertaesedis (1) | | | +--Diploscapter pachys (1) | +--Bacteria (249) | | | +--Proteobacteria (198) | | | | | +--Alphaproteobacteria (2) | | | | | | | +--Rhodospirillales (2) | | | | | | | +--Rhodospirillaceae (2) | | | | | | | +--Haematospirillum jordaniae (2) | | | | | +--Gammaproteobacteria (184) | | | | | | | +--Enterobacterales (10) | | | | | | | | | +--Yersiniaceae (2) | | | | | | | | | | | +--Rahnella (2) | | | | | | | | | | | +--Rahnella aquatilis CIP 78.65 = ATCC 33071 (2) | | | | | | | | | +--Pectobacteriaceae (3) | | | | | | | | | | | +--Sodalis sp. TME1 (3) | | | | | | | | | +--Enterobacteriaceae (4) | | | | | | | | | | | +--Klebsiella michiganensis (2) | | | | | | | | | | | +--Mangrovibacter sp. MFB070 (2) | | | | | | | | | +--Erwiniaceae (1) | | | | | | | | | +--Tatumella (1) | | | | | | | | | +--Tatumella ptyseos ATCC 33301 (1) | | | | | | | +--Xanthomonadales (11) | | | | | | | | | +--Xanthomonadaceae (10) | | | | | | | | | | | +--Stenotrophomonas (1) | | | | | | | | | | | | | +--Stenotrophomonas maltophilia K279a (1) | | | | | | | | | | | +--Aquimonas voraii (2) | | | | | | | | | | | +--Dokdonella sp. PYM5-11 (5) | | | | | | | | | | | +--Dyella soli (1) | | | | | | | | | | | +--Pseudoxanthomonas taiwanensis (1) | | | | | | | | | +--Pseudomonas boreopolis (1) | | | | | | | +--Thiotrichales (1) | | | | | | | | | +--Thiotrichaceae (1) | | | | | | | | | +--Thiothrix eikelboomii (1) | | | | | | | +--Enterobacteriales (30) | | | | | | | | | +--primary endosymbiont of Sitophilus oryzae (1) | | | | | | | | | +--Enterobacteriaceae (29) | | | | | | | | | +--Shigella sonnei Ss046 (1) | | | | | | | | | +--Dickeya dadantii 3937 (3) | | | | | | | | | +--Shigella boydii CDC 3083-94 (1) | | | | | | | | | +--Sodalis glossinidius str. 'morsitans' (3) | | | | | | | | | +--Cedecea neteri (1) | | | | | | | | | +--Enterobacter (2) | | | | | | | | | | | +--Enterobacter cloacae SCF1 (2) | | | | | | | | | +--Leminorella richardii (1) | | | | | | | | | +--Salmonella (1) | | | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1) | | | | | | | | | +--Shigella flexneri 2a str. 301 (1) | | | | | | | | | +--Trabulsiella odontotermitis (1) | | | | | | | | | +--Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- (1) | | | | | | | | | +--Brenneria goodwinii (1) | | | | | | | | | +--Cronobacter sakazakii ATCC BAA-894 (2) | | | | | | | | | +--Escherichia coli O157:H7 (1) | | | | | | | | | +--Erwinia tracheiphila (5) | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Poona (1) | | | | | | | | | +--Shigella dysenteriae Sd197 (1) | | | | | | | | | +--Yersinia ruckeri (1) | | | | | | | | | +--Klebsiella pneumoniae subsp. ozaenae (1) | | | | | | | +--Chromatiales (1) | | | | | | | | | +--Chromatiaceae (1) | | | | | | | | | +--Nitrosococcus halophilus Nc4 (1) | | | | | | | +--Oceanospirillales (6) | | | | | | | | | +--Saccharospirillaceae (1) | | | | | | | | | | | +--Saccharospirillum salsuginis (1) | | | | | | | | | +--Halomonadaceae (5) | | | | | | | | | +--Halotalea alkalilenta (1) | | | | | | | | | +--Salinicola sp. MIT1003 (2) | | | | | | | | | +--Halomonas gudaonensis (1) | | | | | | | | | +--Halomonas (1) | | | | | | | | | +--Halomonas ilicicola DSM 19980 (1) | | | | | | | +--Pseudomonadales (125) | | | | | | | +--Pseudomonadaceae (125) | | | | | | | +--Pseudomonas fulva 12-X (1) | | | | | | | +--Pseudomonas asplenii (8) | | | | | | | +--Pseudomonas salomonii (9) | | | | | | | +--Oblitimonas alkaliphila (1) | | | | | | | +--Pseudomonas corrugata (19) | | | | | | | +--Pseudomonas fluorescens HK44 (15) | | | | | | | +--Pseudomonas aeruginosa PAO1 (1) | | | | | | | +--Pseudomonas panipatensis (2) | | | | | | | +--Pseudomonas sp. StFLB209 (4) | | | | | | | +--Pseudomonas putida KT2440 (9) | | | | | | | +--Pseudomonas jinjuensis (3) | | | | | | | +--Pseudomonas cremoricolorata (1) | | | | | | | +--Pseudomonas fluorescens SBW25 (3) | | | | | | | +--Pseudomonas japonica (15) | | | | | | | +--Pseudomonas sp. HPB0071 (1) | | | | | | | +--Pseudomonas benzenivorans (2) | | | | | | | +--Pseudomonas rhizosphaerae (2) | | | | | | | +--Pseudomonas indica (6) | | | | | | | +--Pseudomonas sp. FeS53a (7) | | | | | | | +--Pseudomonas syringae pv. tomato str. DC3000 (1) | | | | | | | +--Pseudomonas sp. M47T1 (4) | | | | | | | +--Pseudomonas sp. BAY1663 (2) | | | | | | | +--Azomonas agilis (1) | | | | | | | +--Pseudomonas (3) | | | | | | | | | +--Pseudomonasaeruginosagroup (2) | | | | | | | | | | | +--Pseudomonas resinovorans NBRC 106553 (2) | | | | | | | | | +--Pseudomonas knackmussii B13 (1) | | | | | | | +--Pseudomonas sp. 21C1 (3) | | | | | | | +--Azomonas macrocytogenes (2) | | | | | +--Betaproteobacteria (9) | | | | | | | +--unclassifiedBetaproteobacteria (1) | | | | | | | | | +--Candidatus Accumulibacter sp. BA-93 (1) | | | | | | | +--Burkholderiales (4) | | | | | | | | | +--Paucibacter toxinivorans (1) | | | | | | | | | +--Burkholderiaceae (3) | | | | | | | | | +--Cupriavidus basilensis (3) | | | | | | | +--Nitrosomonadales (4) | | | | | | | +--Nitrosomonadaceae (4) | | | | | | | +--Nitrosomonas nitrosa (1) | | | | | | | +--Nitrosospira sp. Nl5 (1) | | | | | | | +--Nitrosomonas aestuarii (1) | | | | | | | +--Nitrosomonas oligotropha (1) | | | | | +--Deltaproteobacteria (1) | | | | | | | +--Desulfobacterales (1) | | | | | | | +--Desulfobulbaceae (1) | | | | | | | +--Desulfobulbus propionicus DSM 2032 (1) | | | | | +--gamma proteobacterium HTCC5015 (1) | | | | | +--delta/epsilonsubdivisions (1) | | | | | +--Deltaproteobacteria (1) | | | | | +--Desulfuromonadales (1) | | | | | +--Desulfuromonadaceae (1) | | | | | +--Desulfuromonas sp. DDH964 (1) | | | +--Pseudomonadota (51) | | | +--Gammaproteobacteria (49) | | | | | +--Enterobacterales (17) | | | | | | | +--Yersiniaceae (2) | | | | | | | | | +--Rouxiella badensis (1) | | | | | | | | | +--Candidatus Fukatsuia symbiotica (1) | | | | | | | +--Pectobacteriaceae (2) | | | | | | | | | +--Affinibrenneria salicis (2) | | | | | | | +--Enterobacteriaceae (9) | | | | | | | | | +--Jejubacter calystegiae (1) | | | | | | | | | +--Kosakonia (1) | | | | | | | | | | | +--Kosakonia cowanii JCM 10956 = DSM 18146 (1) | | | | | | | | | +--Kluyvera genomosp. 3 (1) | | | | | | | | | +--Enterobacteriaceaeincertaesedis (6) | | | | | | | | | +--ant,tsetse,mealybug,aphid,etc.endosymbionts (6) | | | | | | | | | +--Symbiopectobacterium (6) | | | | | | | | | +--Candidatus Symbiopectobacterium sp. Dall1.0 (4) | | | | | | | | | +--Candidatus Symbiopectobacterium sp. PLON1 (1) | | | | | | | | | +--Candidatus Symbiopectobacterium sp. Clec_Harlan (1) | | | | | | | +--Erwiniaceae (3) | | | | | | | | | +--Izhakiella capsodis (1) | | | | | | | | | +--Erwinia sorbitola (1) | | | | | | | | | +--Erwinia (1) | | | | | | | | | +--Erwinia sp. 198 (1) | | | | | | | +--Bruguierivoracaceae (1) | | | | | | | +--Sodalis ligni (1) | | | | | +--Xanthomonadales (1) | | | | | | | +--Rhodanobacteraceae (1) | | | | | | | +--Dyella tabacisoli (1) | | | | | +--Oceanospirillales (3) | | | | | | | +--Halomonadaceae (1) | | | | | | | | | +--Larsenimonas rhizosphaerae (1) | | | | | | | +--Oceanospirillaceae (2) | | | | | | | +--Marinospirillum celere (2) | | | | | +--Pseudomonadales (28) | | | | | +--Pseudomonadaceae (28) | | | | | +--Thiopseudomonas denitrificans (1) | | | | | +--Pseudomonas (25) | | | | | | | +--Pseudomonas sp. HLS-6 (5) | | | | | | | +--Pseudomonas sp. MRSN 12121 (3) | | | | | | | +--Pseudomonas sp. Boi14 (6) | | | | | | | +--Pseudomonas sp. 1239 (1) | | | | | | | +--Pseudomonas sp. THAF187a (2) | | | | | | | +--Pseudomonas sp. v388 (1) | | | | | | | +--Pseudomonas sp. SDI (6) | | | | | | | +--Pseudomonas sp. GV071 (1) | | | | | +--Pseudomonas carbonaria (1) | | | | | +--Pseudomonas cavernae (1) | | | +--Betaproteobacteria (2) | | | +--Neisseriales (2) | | | +--Neisseriaceae (1) | | | | | +--Craterilacuibacter sinensis (1) | | | +--Chitinibacteraceae (1) | | | +--Iodobacter ciconiae (1) | +--Viruses (21) | +--Enterobacteria phage YYZ-2008 (1) | +--Duplodnaviria (11) | | | +--Heunggongvirae (11) | | | +--Uroviricota (11) | | | +--Caudoviricetes (11) | | | +--Marienburgvirus (1) | | | | | +--Escherichia phage JLK-2012 (1) | | | +--Klebsiella phage 48ST307 (1) | | | +--Pankowvirus (1) | | | | | +--Stx2-converting phage Stx2a_WGPS6 (1) | | | +--Escherichia phage D6 (1) | | | +--Punavirus (4) | | | | | +--Escherichia phage JL22 (1) | | | | | +--Escherichia phage vB_EcoM-Ro157c2YLVW (2) | | | | | +--Escherichia phage RCS47 (1) | | | +--Sepvirinae (2) | | | | | +--Traversvirus (2) | | | | | +--Stx2-converting phage Stx2a_F723 (1) | | | | | +--Escherichia phage PA28 (1) | | | +--Bacillus phage vB_BspP_Dartukuta (1) | +--dsDNAviruses,noRNAstage (9) | +--Caudovirales (9) | +--Klebsiella phage phiKO2 (1) | +--Pseudomonas phage PAJU2 (1) | +--Enterobacteria phage VT2-Sakai (1) | +--Endosymbiont phage APSE-1 (1) | +--Myoviridae (2) | | | +--P1virus (1) | | | | | +--Salmonella phage SJ46 (1) | | | +--Enterobacteria phage P1 (1) | +--Siphoviridae (2) | | | +--Lambda-likeviruses (1) | | | | | +--Stx2 converting phage II (1) | | | +--Pseudomonas phage YMC11/02/R656 (1) | +--Podoviridae (1) | +--Sepvirinae (1) | +--Nona33virus (1) | +--Escherichia phage vB_EcoP_24B (1)