# Species tree for RF03142 # Generated from Rfam version 15.00 | +--Eukaryota (1) | | | +--Alveolata (1) | | | +--Dinophyceae (1) | | | +--Suessiales (1) | | | +--Symbiodiniaceae (1) | | | +--Symbiodinium natans (1) | +--Bacteria (315) | +--Proteobacteria (178) | | | +--Alphaproteobacteria (174) | | | | | +--Rhodobacterales bacterium HTCC2255 (1) | | | | | +--Rhodobacterales bacterium Y4I (1) | | | | | +--Rhodobacterales (172) | | | | | +--Rhodobacteraceae bacterium SH6-1 (1) | | | | | +--Rhodobacteraceae bacterium KLH11 (1) | | | | | +--Rhodobacteraceae bacterium ISL-46 (1) | | | | | +--Rhodobacteraceae bacterium KAUST-100406-0324 (1) | | | | | +--Rhodobacteraceae bacterium SH4-1 (1) | | | | | +--Shimia marina (1) | | | | | +--Rhodobacteraceae (165) | | | | | | | +--Celeribacter (1) | | | | | | | | | +--Celeribacter baekdonensis B30 (1) | | | | | | | +--Roseisalinus antarcticus (1) | | | | | | | +--Pararhodobacter aggregans (1) | | | | | | | +--Ponticoccus sp. SJ5A-1 (1) | | | | | | | +--Jannaschia helgolandensis (1) | | | | | | | +--Thalassobius sp. CECT 5114 (1) | | | | | | | +--Ruegeria sp. TM1040 (1) | | | | | | | +--Thiobacimonas profunda (1) | | | | | | | +--Tropicibacter (1) | | | | | | | | | +--Tropicibacter litoreus R37 (1) | | | | | | | +--Thalassobacter sp. 16PALIMAR09 (1) | | | | | | | +--Oceanicola batsensis HTCC2597 (1) | | | | | | | +--Puniceibacterium sp. IMCC21224 (1) | | | | | | | +--Marivita geojedonensis (1) | | | | | | | +--Sagittula stellata E-37 (1) | | | | | | | +--Thioclava sp. SK-1 (1) | | | | | | | +--Rhodovulum thermophilus (1) | | | | | | | +--Loktanella marina (1) | | | | | | | +--Rhodobacter capsulatus SB 1003 (1) | | | | | | | +--Rubellimicrobium sp. MSL 20 (1) | | | | | | | +--Roseovarius pacificus (1) | | | | | | | +--Ruegeria sp. CC-GIMAT-2 (1) | | | | | | | +--Thioclava (1) | | | | | | | | | +--Thioclava pacifica DSM 10166 (1) | | | | | | | +--Roseivivax atlanticus (1) | | | | | | | +--Maritimibacter alkaliphilus HTCC2654 (1) | | | | | | | +--Actibacterium (1) | | | | | | | | | +--Actibacterium mucosum KCTC 23349 (1) | | | | | | | +--Ruegeria sp. ANG-S4 (1) | | | | | | | +--Gemmobacter aquatilis (1) | | | | | | | +--Jannaschia rubra (1) | | | | | | | +--Boseongicola aestuarii (1) | | | | | | | +--Catellibacterium aquatile (1) | | | | | | | +--Antarctobacter sp. JLT354-W (1) | | | | | | | +--Citreimonas salinaria (1) | | | | | | | +--Sulfitobacter marinus (1) | | | | | | | +--Roseivivax (2) | | | | | | | | | +--Roseivivax isoporae LMG 25204 (1) | | | | | | | | | +--Roseivivax halodurans JCM 10272 (1) | | | | | | | +--Loktanella sp. S4079 (1) | | | | | | | +--Ketogulonigenium vulgarum WSH-001 (1) | | | | | | | +--Rhodobacteraceae bacterium PD-2 (1) | | | | | | | +--Rhodobacter sp. SW2 (1) | | | | | | | +--Defluviimonas denitrificans (1) | | | | | | | +--Pelagicola litorisediminis (1) | | | | | | | +--Maritimibacter sp. HL-12 (1) | | | | | | | +--Octadecabacter temperatus (1) | | | | | | | +--Maribius salinus (1) | | | | | | | +--Thalassococcus halodurans (1) | | | | | | | +--Actibacterium atlanticum (1) | | | | | | | +--Loktanella koreensis (1) | | | | | | | +--Roseicyclus mahoneyensis (1) | | | | | | | +--Citreicella sp. CK-I3-6 (1) | | | | | | | +--Roseobacter denitrificans OCh 114 (1) | | | | | | | +--Rhodobacteraceae bacterium SB2 (1) | | | | | | | +--Roseovarius aestuarii (1) | | | | | | | +--Pelagibaca bermudensis HTCC2601 (1) | | | | | | | +--Roseovarius albus (1) | | | | | | | +--Albidovulum inexpectatum (1) | | | | | | | +--Halocynthiibacter arcticus (1) | | | | | | | +--Palleronia marisminoris (1) | | | | | | | +--Oceanibulbus sp. HI0023 (1) | | | | | | | +--Pelagibaca abyssi (1) | | | | | | | +--Thalassobius mediterraneus (1) | | | | | | | +--Jannaschia sp. CCS1 (1) | | | | | | | +--Roseivivax jejudonensis (1) | | | | | | | +--Loktanella vestfoldensis SKA53 (1) | | | | | | | +--Roseovarius nubinhibens ISM (1) | | | | | | | +--Roseovarius halotolerans (1) | | | | | | | +--Jannaschia donghaensis (1) | | | | | | | +--Sulfitobacter (1) | | | | | | | | | +--Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565 (1) | | | | | | | +--Sulfitobacter noctilucicola (1) | | | | | | | +--Pseudooceanicola flagellatus (1) | | | | | | | +--Roseovarius sp. NH52J (1) | | | | | | | +--Pseudooctadecabacter jejudonensis (1) | | | | | | | +--Oceanicola sp. JLT1210 (1) | | | | | | | +--Pseudopelagicola gijangensis (1) | | | | | | | +--Pseudorhodobacter sp. ZS3-33 (1) | | | | | | | +--Roseobacter sp. SK209-2-6 (1) | | | | | | | +--Octadecabacter antarcticus 238 (1) | | | | | | | +--Pseudoruegeria sp. HD-43 (1) | | | | | | | +--Roseovarius tolerans (1) | | | | | | | +--Wenxinia saemankumensis (1) | | | | | | | +--Loktanella salsilacus (1) | | | | | | | +--Ketogulonicigenium robustum (1) | | | | | | | +--Tropicibacter naphthalenivorans (1) | | | | | | | +--Aestuariivita atlantica (1) | | | | | | | +--Tropicimonas sp. M97 (1) | | | | | | | +--Marinovum algicola (1) | | | | | | | +--Catellibacterium sp. Orc-4 (1) | | | | | | | +--Loktanella (1) | | | | | | | | | +--Loktanella hongkongensis DSM 17492 (1) | | | | | | | +--Ruegeria sp. ZGT118 (1) | | | | | | | +--Pacificibacter maritimus (1) | | | | | | | +--Rhodobacter sp. LPB0142 (1) | | | | | | | +--Salipiger (1) | | | | | | | | | +--Salipiger mucosus DSM 16094 (1) | | | | | | | +--Rhodobacteraceae bacterium EhC02 (1) | | | | | | | +--Thioclava indica (1) | | | | | | | +--Pseudoruegeria aquimaris (1) | | | | | | | +--Antarctobacter heliothermus (1) | | | | | | | +--Sulfitobacter mediterraneus (1) | | | | | | | +--Jannaschia seohaensis (1) | | | | | | | +--Phaeobacter gallaeciensis (1) | | | | | | | +--Nereida ignava (1) | | | | | | | +--Litoreibacter (1) | | | | | | | | | +--Litoreibacter arenae DSM 19593 (1) | | | | | | | +--Citreicella sp. ADB (1) | | | | | | | +--Oceanicella actignis (1) | | | | | | | +--Thalassobius sp. GSW-6 (1) | | | | | | | +--Rubellimicrobium (1) | | | | | | | | | +--Rubellimicrobium thermophilum DSM 16684 (1) | | | | | | | +--Phaeobacter sp. CECT 7735 (1) | | | | | | | +--Loktanella sp. 3ANDIMAR09 (1) | | | | | | | +--Candidatus Rhodobacter lobularis (1) | | | | | | | +--Citreicella thiooxidans (1) | | | | | | | +--Jannaschia seosinensis (1) | | | | | | | +--Marivita sp. DPG-28 (1) | | | | | | | +--Roseivivax sp. YIM D21 (1) | | | | | | | +--Roseovarius sp. B108 (1) | | | | | | | +--Rubellimicrobium roseum (1) | | | | | | | +--Jannaschia pohangensis (1) | | | | | | | +--Ruegeria sp. ANG-R (1) | | | | | | | +--Pelagicola litoralis (1) | | | | | | | +--Thalassobius gelatinovorus (1) | | | | | | | +--Roseovarius azorensis (1) | | | | | | | +--Loktanella fryxellensis (1) | | | | | | | +--Rhodobacter sphaeroides 2.4.1 (1) | | | | | | | +--Sulfitobacter pontiacus (1) | | | | | | | +--Loktanella rosea (1) | | | | | | | +--Roseivivax halotolerans (1) | | | | | | | +--Oceanicola litoreus (1) | | | | | | | +--Loktanella atrilutea (1) | | | | | | | +--Jannaschia sp. GSW-M26 (1) | | | | | | | +--Catellibacterium sp. CF17 (1) | | | | | | | +--Roseibacterium (1) | | | | | | | | | +--Roseibacterium elongatum DSM 19469 (1) | | | | | | | +--Sulfitobacter guttiformis (1) | | | | | | | +--Thalassiobium sp. R2A62 (1) | | | | | | | +--Lutimaribacter saemankumensis (1) | | | | | | | +--Tateyamaria sp. ANG-S1 (1) | | | | | | | +--Maribius sp. Y26 (1) | | | | | | | +--Confluentimicrobium lipolyticum (1) | | | | | | | +--Ruegeria sp. ZH17 (1) | | | | | | | +--Maliponia aquimaris (1) | | | | | | | +--Rhodobacter ovatus (1) | | | | | | | +--Oceanicola nanhaiensis (1) | | | | | | | +--Roseovarius sp. HDW-9 (1) | | | | | | | +--Loktanella tamlensis (1) | | | | | | | +--Yangia sp. CCB-MM3 (1) | | | | | | | +--Haematobacter massiliensis (1) | | | | | | | +--Sulfitobacter pseudonitzschiae (1) | | | | | | | +--Nautella italica (1) | | | | | | | +--Thioclava dalianensis (1) | | | | | | | +--Donghicola xiamenensis (1) | | | | | | | +--Dinoroseobacter shibae DFL 12 (1) | | | | | | | +--Pseudooceanicola atlanticus (1) | | | | | | | +--Oceanicola granulosus HTCC2516 (1) | | | | | | | +--Oceaniovalibus (1) | | | | | | | | | +--Oceaniovalibus guishaninsula JLT2003 (1) | | | | | | | +--Rhodobacteraceae bacterium O3.65 (1) | | | | | | | +--Oceanicola marinus (1) | | | | | | | +--Tropicimonas isoalkanivorans (1) | | | | | | | +--Rhodobacteraceae bacterium HIMB11 (1) | | | | | | | +--Wenxinia (1) | | | | | | | | | +--Wenxinia marina DSM 24838 (1) | | | | | | | +--Catellibacterium sp. Ruye-53 (1) | | | | | | | +--Sulfitobacter brevis (1) | | | | | | | +--Ruegeria pomeroyi DSS-3 (1) | | | | | | | +--Roseovarius mucosus (1) | | | | | | | +--Loktanella sediminum (1) | | | | | | | +--Rhodobacter sp. CACIA14H1 (1) | | | | | | | +--Tropicibacter sp. CECT 7557 (1) | | | | | | | +--Sedimentitalea nanhaiensis (1) | | | | | | | +--Primorskyibacter sedentarius (1) | | | | | | | +--Roseovarius crassostreae (1) | | | | | +--Rhodobacteraceae bacterium HTCC2150 (1) | | | +--alpha proteobacterium KMM 9010 (1) | | | +--alpha proteobacterium KMM 9023 (1) | | | +--alpha proteobacterium F028-2 (1) | | | +--alpha proteobacterium ZXM100 (1) | +--Terrabacteriagroup (1) | | | +--Deinococcota (1) | | | +--Deinococci (1) | | | +--Trueperales (1) | | | +--Trueperaceae (1) | | | +--Truepera (1) | | | +--Truepera sp. (1) | +--Pseudomonadota (136) | +--Alphaproteobacteria (136) | +--Hyphomicrobiales (1) | | | +--Stappiaceae (1) | | | +--Roseibium (1) | | | +--Roseibium sp. RKSG952 (1) | +--Rhodobacterales (135) | +--Roseobacteraceae (58) | | | +--Sulfitobacter albidus (1) | | | +--Roseobacter ponti (1) | | | +--Roseobacter insulae (1) | | | +--Sulfitobacter undariae (1) | | | +--Actibacterium pelagium (1) | | | +--Thalassovita litoralis (1) | | | +--Phaeobacter (1) | | | | | +--Phaeobacter sp. 22II1-1F12B (1) | | | +--Thalassococcus profundi (1) | | | +--Roseovarius gaetbuli (1) | | | +--Roseovarius bejariae (1) | | | +--Roseobacter (1) | | | | | +--Roseobacter sp. HKCCD8822 (1) | | | +--Salipiger pallidus (1) | | | +--Palleronia caenipelagi (1) | | | +--Roseovarius (3) | | | | | +--Roseovarius sp. THAF27 (1) | | | | | +--Roseovarius sp. TE539 (1) | | | | | +--Roseovarius sp. A46 (1) | | | +--Oceanicola (1) | | | | | +--Oceanicola sp. 22II-s10i (1) | | | +--Tropicimonas (1) | | | | | +--Tropicimonas sp. IMCC6043 (1) | | | +--Seohaeicola zhoushanensis (1) | | | +--Palleronia pontilimi (1) | | | +--Sulfitobacter (5) | | | | | +--Sulfitobacter sp. THAF37 (1) | | | | | +--Sulfitobacter sp. SK012 (1) | | | | | +--Sulfitobacter sp. JL08 (1) | | | | | +--Sulfitobacter sp. SK011 (1) | | | | | +--Sulfitobacter sp. D7 (1) | | | +--Palleronia abyssalis (1) | | | +--Sulfitobacter sediminilitoris (1) | | | +--Rubellimicrobium (1) | | | | | +--Rubellimicrobium sp. CFH 75288 (1) | | | +--Thalassobius vesicularis (1) | | | +--Sulfitobacter aestuariivivens (1) | | | +--Maritimibacter harenae (1) | | | +--Roseibacterium persicicum (1) | | | +--Sagittula salina (1) | | | +--Citreicella (1) | | | | | +--Citreicella sp. C3M06 (1) | | | +--Ruegeria arenilitoris (1) | | | +--Shimia abyssi (1) | | | +--Palleronia sediminis (1) | | | +--Epibacterium ulvae (1) | | | +--Roseovarius spongiae (1) | | | +--Pontibaca salina (1) | | | +--Oceaniovalibus (1) | | | | | +--Oceaniovalibus sp. ACAM 378 (1) | | | +--Roseobacter cerasinus (1) | | | +--Thetidibacter halocola (1) | | | +--Roseivivax (1) | | | | | +--Roseivivax sp. THAF197b (1) | | | +--Mesobaculum littorinae (1) | | | +--Rubellimicrobium rubrum (1) | | | +--Roseovarius faecimaris (1) | | | +--Maritimibacter fusiformis (1) | | | +--Sulfitobacter sabulilitoris (1) | | | +--Loktanella (1) | | | | | +--Loktanella sp. IMCC34160 (1) | | | +--Litoreibacter ponti (1) | | | +--Roseovarius litoreus (1) | | | +--Aliiruegeria haliotis (1) | | | +--Salibaculum griseiflavum (1) | | | +--Thalassococcus (1) | | | | | +--Thalassococcus sp. S3 (1) | | | +--Octadecabacter (1) | | | | | +--Octadecabacter sp. SW4 (1) | | | +--Salipiger (1) | | | | | +--Salipiger sp. IMCC34102 (1) | | | +--Roseovarius gahaiensis (1) | +--Paracoccaceae (77) | +--Rhodobacteraceae bacterium 63075 (1) | +--Yoonia litorea (1) | +--Ascidiaceihabitans donghaensis (1) | +--Rhodobacter (2) | | | +--Rhodobacter sp. SGA-6-6 (1) | | | +--Rhodobacter sp. 24-YEA-8 (1) | +--Neotabrizicola shimadae (1) | +--Aliiroseovarius sediminilitoris (1) | +--Pseudooceanicola algae (1) | +--Tritonibacter litoralis (1) | +--Tabrizicola (1) | | | +--Tabrizicola sp. TH137 (1) | +--Paenihalocynthiibacter styelae (1) | +--Rhodosalinus sediminis (1) | +--Pseudorhodobacter turbinis (1) | +--Fuscibacter oryzae (1) | +--Tabrizicola piscis (1) | +--Litorivita pollutaquae (1) | +--Fuscovulum (1) | | | +--Fuscovulum blasticum DSM 2131 (1) | +--Aliiroseovarius pelagivivens (1) | +--Pararhodobacter oceanensis (1) | +--Pseudoprimorskyibacter insulae (1) | +--Histidinibacterium lentulum (1) | +--Allosediminivita pacifica (1) | +--Pseudogemmobacter humi (1) | +--Rhodosalinus halophilus (1) | +--Antarcticimicrobium sediminis (1) | +--Tabrizicola oligotrophica (1) | +--Fertoeibacter niger (1) | +--Pontivivens insulae (1) | +--Aliishimia ponticola (1) | +--Sinirhodobacter hankyongi (1) | +--Amylibacter cionae (1) | +--Gemmobacter lutimaris (1) | +--Marinibacterium profundimaris (1) | +--Pseudooceanicola albus (1) | +--Rhodobacteraceae bacterium THAF1 (1) | +--Marivivensgroup (2) | | | +--Marivivens niveibacter (1) | | | +--Marivivens (1) | | | +--Marivivens sp. JLT3646 (1) | +--Zongyanglinia huanghaiensis (1) | +--Pukyongiella litopenaei (1) | +--Pseudooceanicola pacificus (1) | +--Pelagivirga sediminicola (1) | +--Rhodobacteraceae bacterium F11138 (1) | +--Falsirhodobacter algicola (1) | +--Rhodobacteraceae bacterium R_SAG7 (1) | +--Gemmobacter fulvus (1) | +--Pararhodobacter marinus (1) | +--Pseudoroseicyclus tamaricis (1) | +--Defluviimonas aquaemixtae (1) | +--Amylibacter kogurei (1) | +--Pseudorhodobacter (3) | | | +--Pseudorhodobacter sp. PARRP1 (1) | | | +--Pseudorhodobacter sp. MZDSW-24AT (1) | | | +--Pseudorhodobacter sp. E13 (1) | +--Arenibacterium arenosum (1) | +--Thalassorhabdomicrobium marinisediminis (1) | +--Yoonia sediminilitoris (1) | +--Amylibacter (1) | | | +--Amylibacter sp. SFDW26 (1) | +--Gemmobacter aquarius (1) | +--Histidinibacterium aquaticum (1) | +--Mangrovicoccus algicola (1) | +--Pseudooceanicola spongiae (1) | +--Szabonella alba (1) | +--Rhodophyticola porphyridii (1) | +--Cereibacter (1) | | | +--Cereibacter changlensis JA139 (1) | +--Pseudooceanicola lipolyticus (1) | +--Cribrihabitans marinus (1) | +--Pelagovum pacificum (1) | +--Yoonia ponticola (1) | +--Falsigemmobacter intermedius (1) | +--Gemmobacter aestuarii (1) | +--Puniceibacterium antarcticum (1) | +--Rhodobacteraceae bacterium AsT-22 (1) | +--Puniceibacterium sediminis (1) | +--Oceanomicrobium pacificus (1) | +--Silicimonas algicola (1) | +--Rhodobacteraceae bacterium W635 (1) | +--Pseudoroseicyclus aestuarii (1) | +--Rhodobacteraceae bacterium CCMM004 (1)