# Species tree for RF03086 # Generated from Rfam version 15.00 | +--Eukaryota (5) | | | +--Metazoa (3) | | | | | +--Chordata (3) | | | | | +--Craniata (3) | | | | | +--Vertebrata (3) | | | | | +--Euteleostomi (3) | | | | | +--Mammalia (2) | | | | | | | +--Eutheria (2) | | | | | | | +--Euarchontoglires (1) | | | | | | | | | +--Primates (1) | | | | | | | | | +--Haplorrhini (1) | | | | | | | | | +--Platyrrhini (1) | | | | | | | | | +--Cebidae (1) | | | | | | | | | +--Cebinae (1) | | | | | | | | | +--Cebus apella (Tufted capuchin) (1) | | | | | | | +--Laurasiatheria (1) | | | | | | | +--Chiroptera (1) | | | | | | | +--Microchiroptera (1) | | | | | | | +--Molossidae (1) | | | | | | | +--Molossus molossus (Pallas's mastiff bat) (1) | | | | | +--Archosauria (1) | | | | | +--Dinosauria (1) | | | | | +--Saurischia (1) | | | | | +--Theropoda (1) | | | | | +--Coelurosauria (1) | | | | | +--Aves (1) | | | | | +--Neognathae (1) | | | | | +--Passeriformes (1) | | | | | +--Thamnophilidae (1) | | | | | +--Sakesphorus luctuosus (1) | | | +--Viridiplantae (1) | | | | | +--Streptophyta (1) | | | | | +--Embryophyta (1) | | | | | +--Tracheophyta (1) | | | | | +--Spermatophyta (1) | | | | | +--Magnoliophyta (1) | | | | | +--eudicotyledons (1) | | | | | +--coreeudicotyledons (1) | | | | | +--rosids (1) | | | | | +--fabids (1) | | | | | +--Malpighiales (1) | | | | | +--Euphorbiaceae (1) | | | | | +--Acalyphoideae (1) | | | | | +--Acalypheae (1) | | | | | +--Ricinus communis (castor bean) (1) | | | +--Opisthokonta (1) | | | +--Metazoa (1) | | | +--Eumetazoa (1) | | | +--Bilateria (1) | | | +--Deuterostomia (1) | | | +--Chordata (1) | | | +--Craniata (1) | | | +--Vertebrata (1) | | | +--Gnathostomata (1) | | | +--Teleostomi (1) | | | +--Euteleostomi (1) | | | +--Sarcopterygii (1) | | | +--Dipnotetrapodomorpha (1) | | | +--Tetrapoda (1) | | | +--Amniota (1) | | | +--Mammalia (1) | | | +--Theria (1) | | | +--Eutheria (1) | | | +--Boreoeutheria (1) | | | +--Euarchontoglires (1) | | | +--Primates (1) | | | +--Haplorrhini (1) | | | +--Simiiformes (1) | | | +--Platyrrhini (1) | | | +--Cebidae (1) | | | +--Cebinae (1) | | | +--Cebus imitator (Panamanian white-faced capuchin) (1) | +--Bacteria (171) | +--Proteobacteria (66) | | | +--Alphaproteobacteria (48) | | | | | +--Rhizobiales (15) | | | | | | | +--unclassifiedRhizobiales (1) | | | | | | | | | +--Pseudorhodoplanes sinuspersici (1) | | | | | | | +--Hyphomicrobiaceae (2) | | | | | | | | | +--Rhodoplanes sp. Z2-YC6860 (2) | | | | | | | +--Xanthobacteraceae (2) | | | | | | | | | +--Pseudolabrys sp. Root1462 (2) | | | | | | | +--Phyllobacteriaceae (1) | | | | | | | | | +--Mesorhizobium albiziae (1) | | | | | | | +--Bradyrhizobiaceae (9) | | | | | | | +--Bradyrhizobium sp. LTSP885 (1) | | | | | | | +--Bradyrhizobium sp. LMTR 3 (2) | | | | | | | +--Bradyrhizobium japonicum USDA 110 (2) | | | | | | | +--Afipia sp. GAS231 (2) | | | | | | | +--Nitrobacter sp. Nb-311A (1) | | | | | | | +--Bradyrhizobium sp. STM 3843 (1) | | | | | +--Caulobacterales (2) | | | | | | | +--Caulobacteraceae (2) | | | | | | | +--Brevundimonas variabilis (1) | | | | | | | +--Brevundimonas sp. Leaf363 (1) | | | | | +--Sphingomonadales (30) | | | | | | | +--Erythrobacteraceae (3) | | | | | | | | | +--Erythrobacter sp. UST081027-248 (1) | | | | | | | | | +--Altererythrobacter sp. Root672 (1) | | | | | | | | | +--Croceicoccus naphthovorans (1) | | | | | | | +--Sphingomonadaceae (27) | | | | | | | +--Blastomonas sp. AAP25 (1) | | | | | | | +--Novosphingobium sp. AP12 (1) | | | | | | | +--Novosphingobium sp. LL02 (1) | | | | | | | +--Novosphingobium sp. Leaf2 (1) | | | | | | | +--Sphingopyxis macrogoltabida (2) | | | | | | | +--Sphingomonas sp. Leaf33 (1) | | | | | | | +--Sphingopyxis alaskensis RB2256 (2) | | | | | | | +--Novosphingobium sp. ST904 (1) | | | | | | | +--Sphingobium sp. 469 (1) | | | | | | | +--Novosphingobium (1) | | | | | | | | | +--Novosphingobium tardaugens NBRC 16725 (1) | | | | | | | +--Sphingobium sp. Chen 16-4 (1) | | | | | | | +--Sphingobium sp. TCM1 (1) | | | | | | | +--Novosphingobium hassiacum (1) | | | | | | | +--Novosphingobium sp. HU1-AH51 (1) | | | | | | | +--Sphingomonas sp. Leaf339 (1) | | | | | | | +--Sphingomonas desiccabilis (1) | | | | | | | +--Novosphingobium aromaticivorans DSM 12444 (1) | | | | | | | +--Novosphingobium nitrogenifigens DSM 19370 (2) | | | | | | | +--Sphingomonas sp. Leaf42 (1) | | | | | | | +--Sphingobium sp. C100 (1) | | | | | | | +--Sphingobium baderi (1) | | | | | | | +--Sphingobium (2) | | | | | | | | | +--Sphingobium japonicum BiD32 (1) | | | | | | | | | +--Sphingobium ummariense RL-3 (1) | | | | | | | +--Sphingopyxis sp. 113P3 (1) | | | | | +--Sneathiellales (1) | | | | | +--Sneathiellaceae (1) | | | | | +--Sneathiella sp. BFLP-8 (1) | | | +--alpha proteobacterium BAL199 (1) | | | +--Betaproteobacteria (16) | | | | | +--unclassifiedBetaproteobacteria (1) | | | | | | | +--Betaproteobacteria bacterium SCGC AG-212-J23 (1) | | | | | +--Gallionellales (1) | | | | | | | +--Gallionellaceae (1) | | | | | | | +--Candidatus Gallionella acididurans (1) | | | | | +--Methylophilales (1) | | | | | | | +--Methylophilaceae (1) | | | | | | | +--Methylotenera mobilis JLW8 (1) | | | | | +--Burkholderiales (11) | | | | | | | +--Comamonadaceae (11) | | | | | | | +--Rhodoferax koreense (1) | | | | | | | +--Ramlibacter tataouinensis (2) | | | | | | | +--Acidovorax sp. CF316 (1) | | | | | | | +--Polaromonas sp. JS666 (1) | | | | | | | +--Hydrogenophaga sp. A37 (1) | | | | | | | +--Ramlibacter sp. BXN5-27 (1) | | | | | | | +--Ramlibacter tataouinensis TTB310 (1) | | | | | | | +--Acidovorax valerianellae (1) | | | | | | | +--Ramlibacter sp. Leaf400 (2) | | | | | +--Rhodocyclales (1) | | | | | | | +--Rhodocyclaceae (1) | | | | | | | +--Rugosibacter aromaticivorans (1) | | | | | +--Nitrosomonadales (1) | | | | | +--Nitrosomonadaceae (1) | | | | | +--Nitrosospira sp. Nl5 (1) | | | +--alpha proteobacterium USBA 355 (1) | +--Pseudomonadota (105) | +--Alphaproteobacteria (66) | | | +--Hyphomicrobiales (12) | | | | | +--Nitrobacteraceae (7) | | | | | | | +--Bradyrhizobium ivorense (2) | | | | | | | +--Bradyrhizobium (5) | | | | | | | +--Bradyrhizobium sp. Leo170 (5) | | | | | +--Phreatobacteraceae (1) | | | | | | | +--Phreatobacter cathodiphilus (1) | | | | | +--Boseaceae (1) | | | | | | | +--Bosea (1) | | | | | | | +--Bosea sp. OK403 (1) | | | | | +--Phyllobacteriaceae (3) | | | | | +--Mesorhizobium ephedrae (1) | | | | | +--Mesorhizobium (1) | | | | | | | +--Mesorhizobium sp. L-8-10 (1) | | | | | +--Pseudaminobacter soli (1) | | | +--Rhodospirillales (4) | | | | | +--Thalassobaculaceae (1) | | | | | | | +--Thalassobaculum fulvum (1) | | | | | +--Dongiaceae (1) | | | | | | | +--Aliidongia dinghuensis (1) | | | | | +--Rhodospirillaceae (1) | | | | | | | +--Ferrovibrio terrae (1) | | | | | +--Fodinicurvataceae (1) | | | | | +--Limibacillus halophilus (1) | | | +--Caulobacterales (6) | | | | | +--Caulobacteraceae (6) | | | | | +--Caulobacteraceae bacterium (1) | | | | | +--Caulobacter (1) | | | | | | | +--Caulobacter sp. S6 (1) | | | | | +--Phenylobacterium glaciei (1) | | | | | +--Phenylobacterium hankyongense (1) | | | | | +--Brevundimonas goettingensis (2) | | | +--Parvularculales (1) | | | | | +--Parvularculaceae (1) | | | | | +--Marinicaulis flavus (1) | | | +--Sphingomonadales (43) | | | +--Erythrobacteraceae (7) | | | | | +--Alteraurantiacibacter buctensis (2) | | | | | +--Altererythrobacter (3) | | | | | | | +--Altererythrobacter sp. TH136 (1) | | | | | | | +--Altererythrobacter sp. BO-6 (1) | | | | | | | +--Altererythrobacter sp. B11 (1) | | | | | +--Tsuneonella aeria (1) | | | | | +--Croceibacterium salegens (1) | | | +--Sphingomonadaceae (36) | | | +--Sphingopyxis (2) | | | | | +--Sphingopyxis sp. QXT-31 (2) | | | +--Sphingomonas guangdongensis (1) | | | +--Sphingopyxis lindanitolerans (1) | | | +--Novosphingobium arvoryzae (1) | | | +--Parasphingorhabdus halotolerans (1) | | | +--Novosphingobium chloroacetimidivorans (2) | | | +--Sphingomonas metalli (1) | | | +--Novosphingobium umbonatum (1) | | | +--Novosphingobium olei (1) | | | +--Novosphingobium (5) | | | | | +--Novosphingobium sp. (1) | | | | | +--Novosphingobium sp. 9U (2) | | | | | +--Novosphingobium sp. CF614 (1) | | | | | +--Novosphingobium sp. Gsoil 351 (1) | | | +--Sphingobium phenoxybenzoativorans (1) | | | +--Novosphingobium ginsenosidimutans (1) | | | +--Sphingomonas (2) | | | | | +--Sphingomonas sp. CFBP 13720 (1) | | | | | +--Sphingomonas sp. AX6 (1) | | | +--Sphingomonas gilva (1) | | | +--Sphingobium nicotianae (1) | | | +--Sphingomonas baiyangensis (1) | | | +--Novosphingobium endophyticum (1) | | | +--Novosphingobium silvae (1) | | | +--Sphingobium fluviale (1) | | | +--Sphingomonas cavernae (1) | | | +--Novosphingobium colocasiae (1) | | | +--Sphingomonas spermidinifaciens (1) | | | +--Novosphingobium piscinae (1) | | | +--Sphingobium (5) | | | | | +--Sphingobium sp. (1) | | | | | +--Sphingobium sp. YR768 (1) | | | | | +--Sphingobium sp. YG1 (1) | | | | | +--Sphingobium sp. RAC03 (1) | | | | | +--Sphingobium yanoikuyae ATCC 51230 (1) | | | +--Novosphingobium fluoreni (1) | +--Betaproteobacteria (39) | +--Burkholderiales (31) | | | +--Burkholderialesgeneraincertaesedis (1) | | | | | +--Aquabacterium soli (1) | | | +--Burkholderiales bacterium (1) | | | +--Comamonadaceae (29) | | | +--Hydrogenophaga (1) | | | | | +--Hydrogenophaga sp. RAC07 (1) | | | +--Ramlibacter pinisoli (1) | | | +--Polaromonas (2) | | | | | +--Polaromonas sp. Pch-P (1) | | | | | +--Polaromonas sp. A23 (1) | | | +--Ramlibacter montanisoli (2) | | | +--Ramlibacter monticola (2) | | | +--Variovorax terrae (1) | | | +--Ramlibacter (2) | | | | | +--Ramlibacter sp. WS9 (1) | | | | | +--Ramlibacter sp. (1) | | | +--Ramlibacter humi (1) | | | +--Hydrogenophaga aromaticivorans (1) | | | +--Ramlibacter rhizophilus (1) | | | +--Comamonadaceae bacterium (1) | | | +--Polaromonas eurypsychrophila (1) | | | +--Caenimonas aquaedulcis (3) | | | +--Ramlibacter cellulosilyticus (1) | | | +--Ramlibacter agri (2) | | | +--Caenimonas sedimenti (3) | | | +--Comamonas (2) | | | | | +--Comamonas sp. 26 (1) | | | | | +--Comamonas sp. JNW (1) | | | +--Ramlibacter albus (2) | +--Betaproteobacteria bacterium (1) | +--Nitrosomonadales (7) | +--Gallionellaceae (1) | | | +--Sideroxydans (1) | | | +--Sideroxydans sp. CL21 (1) | +--Methylophilaceae (2) | | | +--Methyloradius palustris (1) | | | +--Novimethylophilus kurashikiensis (1) | +--Usitatibacteraceae (4) | +--Usitatibacter palustris (2) | +--Usitatibacter rugosus (2)