# Species tree for RF03064 # Generated from Rfam version 15.00 | +--Eukaryota (4) | | | +--Metazoa (3) | | | | | +--Nematoda (3) | | | | | +--Chromadorea (3) | | | | | +--Ascaridida (2) | | | | | | | +--Ascaridoidea (2) | | | | | | | +--Toxocaridae (2) | | | | | | | +--Toxocara canis (2) | | | | | +--Rhabditida (1) | | | | | +--Strongylida (1) | | | | | +--Strongyloidea (1) | | | | | +--Strongylidae (1) | | | | | +--Cyathostominae (1) | | | | | +--Cylicocyclus nassatus (1) | | | +--Viridiplantae (1) | | | +--Streptophyta (1) | | | +--Embryophyta (1) | | | +--Tracheophyta (1) | | | +--Spermatophyta (1) | | | +--Magnoliophyta (1) | | | +--Liliopsida (1) | | | +--Poales (1) | | | +--Poaceae (1) | | | +--BEPclade (1) | | | +--Ehrhartoideae (1) | | | +--Oryzeae (1) | | | +--Oryza granulata (1) | +--Bacteria (487) | | | +--Actinobacteria (1) | | | | | +--Actinobacteridae (1) | | | | | +--Bifidobacteriales (1) | | | | | +--Bifidobacteriaceae (1) | | | | | +--Bifidobacterium magnum (1) | | | +--Fusobacteria (2) | | | | | +--Fusobacteriales (2) | | | | | +--Fusobacteriaceae (2) | | | | | +--Fusobacterium necrogenes (1) | | | | | +--Cetobacterium ceti (1) | | | +--Fusobacteriota (2) | | | | | +--Fusobacteriia (2) | | | | | +--Fusobacteriales (2) | | | | | +--Fusobacteriaceae (2) | | | | | +--Fusobacterium hominis (2) | | | +--Terrabacteriagroup (330) | | | | | +--Bacillota (173) | | | | | | | +--Firmicutes bacterium AF12-30 (2) | | | | | | | +--Clostridia (124) | | | | | | | | | +--Peptostreptococcales (11) | | | | | | | | | | | +--Natronincolaceae (4) | | | | | | | | | | | | | +--Alkaliphilus pronyensis (1) | | | | | | | | | | | | | +--Serpentinicella alkaliphila (1) | | | | | | | | | | | | | +--Alkaliphilus (2) | | | | | | | | | | | | | +--Alkaliphilus sp. B6464 (2) | | | | | | | | | | | +--Peptostreptococcaceae (7) | | | | | | | | | | | +--Tepidibacter (4) | | | | | | | | | | | | | +--Tepidibacter thalassicus DSM 15285 (4) | | | | | | | | | | | +--Romboutsia maritimum (3) | | | | | | | | | +--Eubacteriales (90) | | | | | | | | | | | +--Syntrophomonadaceae (5) | | | | | | | | | | | | | +--Thermosyntropha (5) | | | | | | | | | | | | | +--Thermosyntropha lipolytica DSM 11003 (5) | | | | | | | | | | | +--Desulfitobacteriaceae (1) | | | | | | | | | | | | | +--Desulfosporosinus (1) | | | | | | | | | | | | | +--Desulfosporosinus sp. HMP52 (1) | | | | | | | | | | | +--Clostridiaceae (84) | | | | | | | | | | | +--Crassaminicella thermophila (1) | | | | | | | | | | | +--Clostridium liquoris (7) | | | | | | | | | | | +--Clostridium (35) | | | | | | | | | | | | | +--Clostridium sp. cel8 (1) | | | | | | | | | | | | | +--Clostridium sp. JN-9 (12) | | | | | | | | | | | | | +--Clostridium sp. DSM 8431 (20) | | | | | | | | | | | | | +--Clostridium sp. SM-530-WT-3G (2) | | | | | | | | | | | +--Clostridium luticellarii (1) | | | | | | | | | | | +--Clostridium senegalense (9) | | | | | | | | | | | +--Clostridium manihotivorum (21) | | | | | | | | | | | +--Clostridiaceae bacterium AF18-31LB (2) | | | | | | | | | | | +--Clostridiaceae bacterium 14S0207 (1) | | | | | | | | | | | +--Proteiniclasticum aestuarii (5) | | | | | | | | | | | +--Clostridium fungisolvens (1) | | | | | | | | | | | +--Oceanirhabdus seepicola (1) | | | | | | | | | +--Koleobacterales (1) | | | | | | | | | | | +--Koleobacteraceae (1) | | | | | | | | | | | +--Koleobacter methoxysyntrophicus (1) | | | | | | | | | +--Lachnospirales (22) | | | | | | | | | +--Lachnospiraceae (22) | | | | | | | | | +--Lachnospiraceae bacterium AM48-27BH (4) | | | | | | | | | +--Agathobacter ruminis (1) | | | | | | | | | +--Lachnospiraceae bacterium A10 (1) | | | | | | | | | +--Lachnospiraceae bacterium XBB1006 (2) | | | | | | | | | +--Blautia faecicola (7) | | | | | | | | | +--Anaerocolumna sedimenticola (1) | | | | | | | | | +--Dorea (1) | | | | | | | | | | | +--Dorea sp. AF36-15AT (1) | | | | | | | | | +--Anaerosacchariphilus hominis (1) | | | | | | | | | +--Mediterraneibacter (1) | | | | | | | | | | | +--Mediterraneibacter sp. gm002 (1) | | | | | | | | | +--Blautia (3) | | | | | | | | | +--Blautia sp. OF03-15BH (3) | | | | | | | +--Bacilli (37) | | | | | | | | | +--Bacillales (37) | | | | | | | | | +--Planococcaceae (3) | | | | | | | | | | | +--Sporosarcina (1) | | | | | | | | | | | | | +--Sporosarcina sp. Marseille-Q4063 (1) | | | | | | | | | | | +--Savagea serpentis (1) | | | | | | | | | | | +--Kurthia (1) | | | | | | | | | | | +--Kurthia sp. 3B1D (1) | | | | | | | | | +--Paenibacillaceae (5) | | | | | | | | | | | +--Gorillibacterium (1) | | | | | | | | | | | | | +--Gorillibacterium sp. (1) | | | | | | | | | | | +--Paenibacillus (1) | | | | | | | | | | | | | +--Paenibacillus sp. yr247 (1) | | | | | | | | | | | +--Aneurinibacillusgroup (3) | | | | | | | | | | | +--Aneurinibacillus soli (3) | | | | | | | | | +--Bacillaceae (11) | | | | | | | | | | | +--Priestia taiwanensis (1) | | | | | | | | | | | +--Niallia taxi (1) | | | | | | | | | | | +--Bacillus (3) | | | | | | | | | | | | | +--Bacillus sp. AFS041924 (3) | | | | | | | | | | | +--Bacillaceae bacterium SAS-127 (2) | | | | | | | | | | | +--Niallia endozanthoxylica (4) | | | | | | | | | +--Thermoactinomycetaceae (18) | | | | | | | | | +--Paenactinomyces guangxiensis (8) | | | | | | | | | +--Desmospora (3) | | | | | | | | | | | +--Desmospora activa DSM 45169 (3) | | | | | | | | | +--Thermoflavimicrobium daqui (6) | | | | | | | | | +--Shimazuella alba (1) | | | | | | | +--Negativicutes (3) | | | | | | | | | +--Selenomonadales (3) | | | | | | | | | +--Sporomusaceae (3) | | | | | | | | | +--Sporomusa (3) | | | | | | | | | +--Sporomusa silvacetica DSM 10669 (3) | | | | | | | +--Firmicutes bacterium AF36-19BH (2) | | | | | | | +--Tissierellia (3) | | | | | | | | | +--Tissierellales (3) | | | | | | | | | +--Sporanaerobacteraceae (3) | | | | | | | | | +--Anaerosalibacter massiliensis (3) | | | | | | | +--Erysipelotrichia (2) | | | | | | | +--Erysipelotrichales (2) | | | | | | | +--Erysipelotrichaceae (2) | | | | | | | +--Intestinibaculum porci (2) | | | | | +--Firmicutes (157) | | | | | +--Firmicutes bacterium CAG:41 (1) | | | | | +--unclassifiedFirmicutessensustricto (9) | | | | | | | +--Firmicutes bacterium M10-2 (9) | | | | | +--Erysipelotrichia (3) | | | | | | | +--Erysipelotrichales (3) | | | | | | | +--Erysipelotrichaceae (3) | | | | | | | +--Erysipelatoclostridium (1) | | | | | | | | | +--[Clostridium] innocuum 2959 (1) | | | | | | | +--Catenibacterium (2) | | | | | | | +--Catenibacterium sp. CAG:290 (2) | | | | | +--Clostridia (111) | | | | | | | +--Clostridiales (111) | | | | | | | +--Lachnospiraceae (16) | | | | | | | | | +--Robinsoniella sp. RHS (1) | | | | | | | | | +--Roseburia (1) | | | | | | | | | | | +--Roseburia sp. CAG:197 (1) | | | | | | | | | +--Blautia (2) | | | | | | | | | | | +--Blautia sp. CAG:37 (2) | | | | | | | | | +--Anaerostipes sp. 992a (12) | | | | | | | +--Peptococcaceae (1) | | | | | | | | | +--Desulfosporosinus sp. I2 (1) | | | | | | | +--unclassifiedClostridiales (34) | | | | | | | | | +--Epulopiscium sp. Nuni2H_MBin003 (1) | | | | | | | | | +--Clostridiales bacterium CHKCI001 (6) | | | | | | | | | +--Gottschalkia (8) | | | | | | | | | | | +--[Clostridium] acidurici 9a (8) | | | | | | | | | +--Epulopiscium sp. Nele67-Bin004 (12) | | | | | | | | | +--Epulopiscium sp. SCG-C07WGA-EpuloA2 (3) | | | | | | | | | +--unclassifiedClostridiales(miscellaneous) (1) | | | | | | | | | | | +--Clostridiales bacterium oral taxon 876 str. F0540 (1) | | | | | | | | | +--Clostridiales bacterium KLE1615 (1) | | | | | | | | | +--Epulopiscium sp. Nuni2H_MBin001 (2) | | | | | | | +--Peptostreptococcaceae (10) | | | | | | | | | +--Peptoclostridium (8) | | | | | | | | | | | +--Peptoclostridium litorale DSM 5388 (1) | | | | | | | | | | | +--Peptoclostridium acidaminophilum DSM 3953 (7) | | | | | | | | | +--Paraclostridium benzoelyticum (1) | | | | | | | | | +--Peptostreptococcus (1) | | | | | | | | | +--Peptostreptococcus anaerobius CAG:621 (1) | | | | | | | +--Eubacteriaceae (3) | | | | | | | | | +--Eubacterium (3) | | | | | | | | | +--Eubacterium rectale CAG:36 (2) | | | | | | | | | +--Eubacterium sp. CAG:274 (1) | | | | | | | +--Clostridiaceae (47) | | | | | | | +--Clostridium sp. BL8 (5) | | | | | | | +--Clostridium bornimense (2) | | | | | | | +--Clostridium (34) | | | | | | | | | +--Clostridium saccharobutylicum DSM 13864 (3) | | | | | | | | | +--Clostridium sp. CAG:265 (2) | | | | | | | | | +--Clostridium homopropionicum DSM 5847 (1) | | | | | | | | | +--Clostridium sp. CAG:7 (1) | | | | | | | | | +--Clostridium argentinense CDC 2741 (4) | | | | | | | | | +--Clostridium acetireducens DSM 10703 (1) | | | | | | | | | +--Clostridium tepidiprofundi DSM 19306 (7) | | | | | | | | | +--Clostridium grantii DSM 8605 (5) | | | | | | | | | +--Clostridium magnum DSM 2767 (3) | | | | | | | | | +--Clostridium pasteurianum DSM 525 = ATCC 6013 (5) | | | | | | | | | +--Clostridium cylindrosporum DSM 605 (2) | | | | | | | +--Fervidicella (1) | | | | | | | | | +--Fervidicella metallireducens AeB (1) | | | | | | | +--Hathewaya (1) | | | | | | | | | +--Hathewaya proteolytica DSM 3090 (1) | | | | | | | +--Clostridium amylolyticum (2) | | | | | | | +--Paramaledivibacter (1) | | | | | | | | | +--Paramaledivibacter caminithermalis DSM 15212 (1) | | | | | | | +--Clostridium sp. USBA 49 (1) | | | | | +--Bacilli (27) | | | | | | | +--Lactobacillales (10) | | | | | | | | | +--Enterococcaceae (5) | | | | | | | | | | | +--Enterococcus (2) | | | | | | | | | | | | | +--Enterococcus columbae DSM 7374 = ATCC 51263 (2) | | | | | | | | | | | +--Enterococcus sp. 10A9_DIV0425 (3) | | | | | | | | | +--Lactobacillaceae (5) | | | | | | | | | +--Lactobacillus mixtipabuli (5) | | | | | | | +--Bacillales (17) | | | | | | | +--Planococcaceae (3) | | | | | | | | | +--Sporosarcina sp. HYO08 (3) | | | | | | | +--Alicyclobacillaceae (1) | | | | | | | | | +--Alicyclobacillus sp. USBA-503 (1) | | | | | | | +--Paenibacillaceae (2) | | | | | | | | | +--Paenibacillus (1) | | | | | | | | | | | +--Paenibacillus popilliae ATCC 14706 (1) | | | | | | | | | +--Brevibacillus (1) | | | | | | | | | +--Brevibacillus panacihumi W25 (1) | | | | | | | +--Bacillaceae (11) | | | | | | | +--Anoxybacillus sp. B7M1 (1) | | | | | | | +--Bacillus sp. SGD-V-76 (1) | | | | | | | +--Bacillus (9) | | | | | | | +--Bacillus smithii 7_3_47FAA (9) | | | | | +--Firmicutes bacterium CAG:56 (1) | | | | | +--Firmicutes bacterium CAG:95 (1) | | | | | +--Firmicutes bacterium CAG:227 (1) | | | | | +--Tissierellia (3) | | | | | +--Tissierellales (3) | | | | | +--Sporanaerobacter (1) | | | | | | | +--Sporanaerobacter acetigenes DSM 13106 (1) | | | | | +--Tissierellaceae (2) | | | | | +--Tissierella (2) | | | | | +--Tissierella creatinophila DSM 6911 (2) | | | +--Firmicutes (152) | | | +--Clostridia (99) | | | | | +--Thermoanaerobacterales (1) | | | | | | | +--Thermoanaerobacteraceae (1) | | | | | | | +--Tepidanaerobacter syntrophicus (1) | | | | | +--Clostridiales genomosp. BVAB3 str. UPII9-5 (1) | | | | | +--Clostridiales (97) | | | | | +--Ruminococcaceae (5) | | | | | | | +--Acetivibrio ethanolgignens (1) | | | | | | | +--Ruminococcus torques (3) | | | | | | | +--Ruminococcus lactaris ATCC 29176 (1) | | | | | +--Blautia luti (6) | | | | | +--Lachnospiraceae (10) | | | | | | | +--Coprococcus catus (1) | | | | | | | +--Butyrivibrio fibrisolvens (1) | | | | | | | +--Lachnospira multipara (4) | | | | | | | +--Coprococcus comes ATCC 27758 (3) | | | | | | | +--Roseburia inulinivorans (1) | | | | | +--ClostridialesFamilyXI.IncertaeSedis (1) | | | | | | | +--Finegoldia magna ATCC 29328 (1) | | | | | +--Blautia wexlerae (4) | | | | | +--Peptococcaceae (4) | | | | | | | +--Desulfotomaculum acetoxidans DSM 771 (3) | | | | | | | +--Desulfosporosinus sp. M1 (1) | | | | | +--Eubacteriaceae (9) | | | | | | | +--Eubacterium angustum (1) | | | | | | | +--Eubacterium tarantellae (6) | | | | | | | +--Eubacterium ruminantium (2) | | | | | +--Clostridiaceae (58) | | | | | +--Thermotalea metallivorans (2) | | | | | +--Clostridium sp. D3RC-2 (1) | | | | | +--Clostridium ljungdahlii (5) | | | | | +--Clostridium aceticum (1) | | | | | +--Clostridium pasteurianum BC1 (3) | | | | | +--Clostridium tetani E88 (3) | | | | | +--Clostridium carboxidivorans P7 (2) | | | | | +--Caloramator fervidus (1) | | | | | +--Clostridium kluyveri DSM 555 (3) | | | | | +--Clostridium taeniosporum (2) | | | | | +--Clostridium perfringens str. 13 (8) | | | | | +--Clostridium uliginosum (3) | | | | | +--Clostridium phytofermentans ISDg (3) | | | | | +--Clostridium aciditolerans (2) | | | | | +--Clostridium saccharoperbutylacetonicum ATCC 27021 (2) | | | | | +--Clostridium hiranonis DSM 13275 (1) | | | | | +--Clostridium purinilyticum (5) | | | | | +--Alkaliphilus metalliredigens QYMF (1) | | | | | +--Clostridium sticklandii DSM 519 (2) | | | | | +--Clostridium difficile (1) | | | | | +--Clostridium putrefaciens (2) | | | | | +--Anaerobacter polyendosporus (3) | | | | | +--Clostridium sp. ASF356 (1) | | | | | +--Clostridium sulfidigenes (1) | | | +--Lactobacillales (8) | | | | | +--Carnobacteriaceae (5) | | | | | | | +--Granulicatella balaenopterae (3) | | | | | | | +--Trichococcus palustris (2) | | | | | +--Enterococcaceae (2) | | | | | | | +--Enterococcus italicus DSM 15952 (1) | | | | | | | +--Enterococcus canis (1) | | | | | +--Lactobacillaceae (1) | | | | | +--Sharpea azabuensis (1) | | | +--Negativicutes (6) | | | | | +--Selenomonadales (6) | | | | | +--Veillonellaceae (6) | | | | | +--Mitsuokella jalaludinii (3) | | | | | +--Sporomusa sp. An4 (2) | | | | | +--Pectinatus sp. TY (1) | | | +--Bacillales (39) | | | +--Thermoactinomycetaceae bacterium NariEX (2) | | | +--Planococcaceae (2) | | | | | +--Sporosarcina luteola (1) | | | | | +--Caryophanon tenue (1) | | | +--Bacillaceae (19) | | | | | +--Bacillus taeanensis (2) | | | | | +--Bacillus asahii (1) | | | | | +--Bacillus sp. BL4-6 (2) | | | | | +--Bacillus (1) | | | | | | | +--Bacillus anthracis str. 'Ames Ancestor' (1) | | | | | +--Vulcanibacillus modesticaldus (3) | | | | | +--Bacillus nealsonii (1) | | | | | +--Bacillus alkalidiazotrophicus (1) | | | | | +--Halolactibacillus alkaliphilus (3) | | | | | +--Anoxybacillus amylolyticus (3) | | | | | +--Lysinibacillus sphaericus (2) | | | +--Paenibacillaceae (7) | | | | | +--Paenibacillus naphthalenovorans (1) | | | | | +--Brevibacillus centrosporus (2) | | | | | +--Paenibacillus stellifer (1) | | | | | +--Paenibacillus pectinilyticus (1) | | | | | +--Aneurinibacillusgroup (2) | | | | | +--Ammoniphilus oxalaticus (1) | | | | | +--Aneurinibacillus migulanus (1) | | | +--Sporolactobacillaceae (2) | | | | | +--Sporolactobacillus inulinus (1) | | | | | +--Sporolactobacillus inulinus CASD (1) | | | +--Thermoactinomycetaceae (7) | | | +--Thermoflavimicrobium dichotomicum (7) | +--Viruses (27) | +--Duplodnaviria (21) | | | +--Heunggongvirae (21) | | | +--Uroviricota (21) | | | +--Caudoviricetes (21) | | | +--Herelleviridae (17) | | | | | +--Tybeckvirus (3) | | | | | | | +--Levilactobacillus phage ENFP1 (1) | | | | | | | +--Lactobacillus phage 521B (2) | | | | | +--Bastillevirinae (1) | | | | | | | +--Bacillus phage vB_BceH_LY2 (1) | | | | | +--Twortvirinae (13) | | | | | +--Sepunavirus (1) | | | | | | | +--Staphylococcus phage phiIBB-SEP1 (1) | | | | | +--Baoshanvirus (1) | | | | | | | +--Staphylococcus phage vB_SsapH-Golestan101-M (1) | | | | | +--Staphylococcus phage PALS_1 (1) | | | | | +--Silviavirus (10) | | | | | +--Staphylococcus phage SA11 (1) | | | | | +--Staphylococcus phage PBSA08 (1) | | | | | +--Staphylococcus phage vB_SauH_DELF3 (2) | | | | | +--Staphylococcus phage PM56 (1) | | | | | +--Staphylococcus phage qdsa001 (2) | | | | | +--Staphylococcus phage vB_SauM-V1SA19 (3) | | | +--Cecivirus (1) | | | | | +--Bacillus phage vB_BceS_LY4 (1) | | | +--Enterocloster phage CB457P1 (1) | | | +--Latrobevirus (1) | | | | | +--Fusobacterium phage Fnu1 (1) | | | +--Butyrivibrio virus Ceridwen (1) | +--dsDNAviruses,noRNAstage (6) | +--Caudovirales (6) | +--Clostridium phage c-st (4) | +--Bacillus phage IEBH (1) | +--Myoviridae (1) | +--Spounavirinae (1) | +--Twortvirus (1) | +--Staphylococcus phage Twort DSM 17442 (1)