# Species tree for RF03058 # Generated from Rfam version 15.00 | +--Eukaryota (9) | | | +--Metazoa (1) | | | | | +--Mollusca (1) | | | | | +--Cephalopoda (1) | | | | | +--Coleoidea (1) | | | | | +--Neocoleoidea (1) | | | | | +--Decapodiformes (1) | | | | | +--Sepiida (1) | | | | | +--Sepiina (1) | | | | | +--Sepiidae (1) | | | | | +--Sepia pharaonis (1) | | | +--Viridiplantae (2) | | | | | +--Streptophyta (2) | | | | | +--Embryophyta (2) | | | | | +--Tracheophyta (2) | | | | | +--Spermatophyta (2) | | | | | +--Magnoliophyta (2) | | | | | +--eudicotyledons (2) | | | | | +--coreeudicotyledons (2) | | | | | +--rosids (2) | | | | | +--fabids (1) | | | | | | | +--Malpighiales (1) | | | | | | | +--Euphorbiaceae (1) | | | | | | | +--Acalyphoideae (1) | | | | | | | +--Acalypheae (1) | | | | | | | +--Ricinus communis (castor bean) (1) | | | | | +--malvids (1) | | | | | +--Malvales (1) | | | | | +--Malvaceae (1) | | | | | +--Malvoideae (1) | | | | | +--Gossypium hirsutum (upland cotton) (1) | | | +--Opisthokonta (6) | | | +--Metazoa (6) | | | +--Eumetazoa (6) | | | +--Bilateria (6) | | | +--Protostomia (6) | | | +--Ecdysozoa (6) | | | +--Nematoda (1) | | | | | +--Chromadorea (1) | | | | | +--Rhabditida (1) | | | | | +--Rhabditina (1) | | | | | +--Rhabditomorpha (1) | | | | | +--Rhabditoidea (1) | | | | | +--Rhabditidae (1) | | | | | +--Rhabditidaeincertaesedis (1) | | | | | +--Diploscapter pachys (1) | | | +--Panarthropoda (5) | | | +--Arthropoda (5) | | | +--Mandibulata (5) | | | +--Pancrustacea (5) | | | +--Crustacea (5) | | | +--Multicrustacea (5) | | | +--Thecostraca (5) | | | +--Cirripedia (5) | | | +--Thoracica (5) | | | +--Thoracicalcarea (5) | | | +--Balanomorpha (5) | | | +--Balanoidea (5) | | | +--Balanidae (5) | | | +--Amphibalaninae (5) | | | +--Amphibalanus amphitrite (striped barnacle) (5) | +--Bacteria (509) | | | +--Actinobacteria (1) | | | | | +--Actinobacteridae (1) | | | | | +--Actinomycetales (1) | | | | | +--Streptomycineae (1) | | | | | +--Streptomycetaceae (1) | | | | | +--Streptomyces sp. SN-593 (1) | | | +--Proteobacteria (267) | | | | | +--Alphaproteobacteria (255) | | | | | | | +--Polymorphum gilvum SL003B-26A1 (1) | | | | | | | +--Rhizobiales (101) | | | | | | | | | +--Bartonellaceae (1) | | | | | | | | | | | +--Bartonella (1) | | | | | | | | | | | +--Bartonella tamiae Th239 (1) | | | | | | | | | +--Brucellaceae (5) | | | | | | | | | | | +--Ochrobactrum (1) | | | | | | | | | | | | | +--Ochrobactrum intermedium 229E (1) | | | | | | | | | | | +--Ochrobactrum rhizosphaerae (1) | | | | | | | | | | | +--Pseudochrobactrum saccharolyticum (1) | | | | | | | | | | | +--Mycoplana dimorpha (2) | | | | | | | | | +--Aurantimonadaceae (15) | | | | | | | | | | | +--Aurantimonas manganoxydans SI85-9A1 (1) | | | | | | | | | | | +--Martelella sp. AD-3 (1) | | | | | | | | | | | +--Aurantimonas sp. USBA 369 (1) | | | | | | | | | | | +--Aurantimonas altamirensis (1) | | | | | | | | | | | +--Aureimonas sp. Leaf454 (2) | | | | | | | | | | | +--Aurantimonas sp. Leaf443 (1) | | | | | | | | | | | +--Martelella endophytica (1) | | | | | | | | | | | +--Aureimonas sp. Leaf324 (1) | | | | | | | | | | | +--Aurantimonas sp. 22II-16-19i (1) | | | | | | | | | | | +--Aureimonas sp. AU20 (1) | | | | | | | | | | | +--Aureimonas sp. Leaf460 (1) | | | | | | | | | | | +--Fulvimarina pelagi HTCC2506 (1) | | | | | | | | | | | +--Martelella (1) | | | | | | | | | | | | | +--Martelella mediterranea DSM 17316 (1) | | | | | | | | | | | +--Martelella mediterranea (1) | | | | | | | | | +--Phyllobacteriaceae (9) | | | | | | | | | | | +--Nitratireductor (1) | | | | | | | | | | | | | +--Nitratireductor indicus C115 (1) | | | | | | | | | | | +--Pseudaminobacter salicylatoxidans (1) | | | | | | | | | | | +--Nitratireductor basaltis (1) | | | | | | | | | | | +--Mesorhizobium sp. ORS3428 (1) | | | | | | | | | | | +--Nitratireductor sp. Pht-3B (1) | | | | | | | | | | | +--Mesorhizobium sp. B7 (1) | | | | | | | | | | | +--Paramesorhizobium deserti (1) | | | | | | | | | | | +--Mesorhizobium (1) | | | | | | | | | | | | | +--Mesorhizobium alhagi CCNWXJ12-2 (1) | | | | | | | | | | | +--Phyllobacterium leguminum (1) | | | | | | | | | +--unclassifiedRhizobiales (3) | | | | | | | | | | | +--Methyloligella halotolerans (1) | | | | | | | | | | | +--Methylobrevis pamukkalensis (2) | | | | | | | | | +--Hyphomicrobiaceae (14) | | | | | | | | | | | +--Devosia chinhatensis (1) | | | | | | | | | | | +--Devosia sp. Root436 (1) | | | | | | | | | | | +--Devosia crocina (1) | | | | | | | | | | | +--Maritalea myrionectae (1) | | | | | | | | | | | +--Pelagibacterium halotolerans B2 (1) | | | | | | | | | | | +--Prosthecomicrobium enhydrum (1) | | | | | | | | | | | +--Devosia soli (1) | | | | | | | | | | | +--Prosthecomicrobium pneumaticum (1) | | | | | | | | | | | +--Devosia geojensis (1) | | | | | | | | | | | +--Angulomicrobium tetraedale (1) | | | | | | | | | | | +--Devosia sp. LC5 (1) | | | | | | | | | | | +--Devosia (2) | | | | | | | | | | | | | +--Devosia limi DSM 17137 (2) | | | | | | | | | | | +--Aquabacter spiritensis (1) | | | | | | | | | +--Rhizobiaceae (31) | | | | | | | | | | | +--Kaistia (1) | | | | | | | | | | | | | +--Kaistia soli DSM 19436 (1) | | | | | | | | | | | +--Shinella sp. DC-196 (1) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (27) | | | | | | | | | | | | | +--Rhizobium alkalisoli (1) | | | | | | | | | | | | | +--Rhizobium sp. Leaf306 (1) | | | | | | | | | | | | | +--Rhizobium sp. Root482 (1) | | | | | | | | | | | | | +--Rhizobium sp. RU36D (1) | | | | | | | | | | | | | +--Rhizobium sp. Root149 (1) | | | | | | | | | | | | | +--Rhizobium sp. YS-1r (1) | | | | | | | | | | | | | +--Rhizobium sp. NT-26 (1) | | | | | | | | | | | | | +--Rhizobium oryzae (1) | | | | | | | | | | | | | +--Rhizobium oryziradicis (1) | | | | | | | | | | | | | +--Rhizobium sp. Leaf371 (1) | | | | | | | | | | | | | +--Pseudorhizobium pelagicum (1) | | | | | | | | | | | | | +--Agrobacterium vitis S4 (2) | | | | | | | | | | | | | +--Rhizobium cellulosilyticum (2) | | | | | | | | | | | | | +--Agrobacterium (5) | | | | | | | | | | | | | | | +--Agrobacterium albertimagni AOL15 (5) | | | | | | | | | | | | | +--Pararhizobium polonicum (1) | | | | | | | | | | | | | +--Rhizobium sp. JC85 (1) | | | | | | | | | | | | | +--Agrobacterium tumefaciens str. C58 (1) | | | | | | | | | | | | | +--Rhizobium sp. LC145 (3) | | | | | | | | | | | | | +--Rhizobium sp. PDO1-076 (1) | | | | | | | | | | | +--Sinorhizobium/Ensifergroup (2) | | | | | | | | | | | +--Sinorhizobium meliloti 1021 (1) | | | | | | | | | | | +--Ensifer sp. YIC4027 (1) | | | | | | | | | +--Xanthobacteraceae (5) | | | | | | | | | | | +--Starkeya novella DSM 506 (1) | | | | | | | | | | | +--Azorhizobium sp. DSM 18749 (1) | | | | | | | | | | | +--Labrys okinawensis (1) | | | | | | | | | | | +--Xanthobacter tagetidis (1) | | | | | | | | | | | +--Pseudoxanthobacter (1) | | | | | | | | | | | +--Pseudoxanthobacter soli DSM 19599 (1) | | | | | | | | | +--Methylobacteriaceae (4) | | | | | | | | | | | +--Methylobacterium rhodinum (1) | | | | | | | | | | | +--Methylobacterium extorquens AM1 (2) | | | | | | | | | | | +--Methylobacterium sp. 23e (1) | | | | | | | | | +--Bradyrhizobiaceae (11) | | | | | | | | | | | +--Bosea sp. PAMC 26642 (1) | | | | | | | | | | | +--Bosea sp. TND4EK4 (1) | | | | | | | | | | | +--Bosea sp. Root381 (1) | | | | | | | | | | | +--Bosea sp. RAC05 (1) | | | | | | | | | | | +--Bosea sp. Root483D1 (1) | | | | | | | | | | | +--Afipia sp. Root123D2 (1) | | | | | | | | | | | +--Bosea sp. LC85 (1) | | | | | | | | | | | +--Bosea sp. LMG 26379 (1) | | | | | | | | | | | +--Rhodopseudomonas sp. R-45977 (1) | | | | | | | | | | | +--Bosea sp. WAO (1) | | | | | | | | | | | +--Nitrobacter hamburgensis X14 (1) | | | | | | | | | +--Beijerinckiaceae (3) | | | | | | | | | +--Methylocella tundrae (1) | | | | | | | | | +--Beijerinckia indica subsp. indica ATCC 9039 (1) | | | | | | | | | +--Chelatococcus asaccharovorans (1) | | | | | | | +--Caulobacterales (10) | | | | | | | | | +--Caulobacteraceae (10) | | | | | | | | | +--Brevundimonas sp. AAP58 (1) | | | | | | | | | +--Brevundimonas subvibrioides ATCC 15264 (1) | | | | | | | | | +--Brevundimonas sp. SH203 (1) | | | | | | | | | +--Asticcacaulis sp. YBE204 (1) | | | | | | | | | +--Brevundimonas sp. J22 (1) | | | | | | | | | +--Asticcacaulis sp. AC466 (1) | | | | | | | | | +--Brevundimonas halotolerans (1) | | | | | | | | | +--Brevundimonas sp. Leaf363 (1) | | | | | | | | | +--Brevundimonas naejangsanensis (1) | | | | | | | | | +--Phenylobacterium sp. Root1277 (1) | | | | | | | +--Rhodospirillales (9) | | | | | | | | | +--Acetobacteraceae (7) | | | | | | | | | | | +--Stella humosa (1) | | | | | | | | | | | +--Acetobacteraceae bacterium AT-5844 (1) | | | | | | | | | | | +--Roseomonas deserti (1) | | | | | | | | | | | +--Roseomonas sp. N75 (1) | | | | | | | | | | | +--Acidocella sp. MX-AZ02 (1) | | | | | | | | | | | +--Acidocella (1) | | | | | | | | | | | | | +--Acidocella aminolytica 101 = DSM 11237 (1) | | | | | | | | | | | +--Belnapia sp. CPCC 100156 (1) | | | | | | | | | +--Rhodospirillaceae (2) | | | | | | | | | +--Inquilinus limosus (2) | | | | | | | +--Rhizobiales bacterium 8.047 (1) | | | | | | | +--Sphingomonadales (65) | | | | | | | | | +--Erythrobacteraceae (4) | | | | | | | | | | | +--Porphyrobacter mercurialis (1) | | | | | | | | | | | +--Erythrobacter sp. SG61-1L (1) | | | | | | | | | | | +--Erythrobacter vulgaris (1) | | | | | | | | | | | +--Erythrobacter sp. QSSC1-22B (1) | | | | | | | | | +--Sphingomonadaceae (61) | | | | | | | | | +--Novosphingobium sp. AP12 (1) | | | | | | | | | +--Novosphingobium sp. LL02 (1) | | | | | | | | | +--Sphingopyxis macrogoltabida (1) | | | | | | | | | +--Novosphingobium sp. Leaf2 (1) | | | | | | | | | +--Sphingomonas sp. Leaf33 (1) | | | | | | | | | +--Novosphingobium sp. ST904 (1) | | | | | | | | | +--Sphingomonas wittichii RW1 (1) | | | | | | | | | +--Sphingobium sp. LL03 (2) | | | | | | | | | +--Sphingobium sp. 469 (1) | | | | | | | | | +--Sphingobium sp. TCM1 (1) | | | | | | | | | +--Novosphingobium sp. LE124 (1) | | | | | | | | | +--Novosphingobium sp. PP1Y (1) | | | | | | | | | +--Novosphingobium sp. HU1-AH51 (1) | | | | | | | | | +--Sphingomonas desiccabilis (1) | | | | | | | | | +--Sphingomonas sp. Leaf339 (1) | | | | | | | | | +--Sphingomonas (1) | | | | | | | | | | | +--Sphingomonas sanxanigenens DSM 19645 = NX02 (1) | | | | | | | | | +--Sphingomonas adhaesiva (1) | | | | | | | | | +--Sphingobium xenophagum (2) | | | | | | | | | +--Sphingomonas sp. YC6723 (1) | | | | | | | | | +--Sphingomonas sp. Root720 (1) | | | | | | | | | +--Sphingomonas sp. IC081 (1) | | | | | | | | | +--Sphingomonas sp. SRS2 (1) | | | | | | | | | +--Sphingomonas melonis (1) | | | | | | | | | +--Sphingomonas sp. VC-230 (1) | | | | | | | | | +--Sphingopyxis sp. BZ30 (1) | | | | | | | | | +--Novosphingobium pentaromativorans US6-1 (1) | | | | | | | | | +--Sphingomonas sp. Leaf231 (1) | | | | | | | | | +--Sphingobium baderi (1) | | | | | | | | | +--Sphingomonas jeddahensis (1) | | | | | | | | | +--Sphingomonas sp. SKA58 (1) | | | | | | | | | +--Sphingobium sp. SYK-6 (1) | | | | | | | | | +--Sphingomonas sp. JJ-A5 (1) | | | | | | | | | +--Sphingomonas sp. 10-1-84 (1) | | | | | | | | | +--Sphingomonas taxi (1) | | | | | | | | | +--Novosphingobium sp. AAP1 (1) | | | | | | | | | +--Sphingomonas kaistensis (1) | | | | | | | | | +--Sphingomonas sp. Leaf343 (1) | | | | | | | | | +--Sphingopyxis alaskensis RB2256 (1) | | | | | | | | | +--Sphingomonas sp. Leaf17 (1) | | | | | | | | | +--Sphingomonas sp. WG (1) | | | | | | | | | +--Sphingomonas sp. BH3 (1) | | | | | | | | | +--Novosphingobium sp. AAP83 (1) | | | | | | | | | +--Novosphingobium aromaticivorans DSM 12444 (1) | | | | | | | | | +--Sphingomonas sp. MCT13 (1) | | | | | | | | | +--Sphingomonas sp. Leaf42 (1) | | | | | | | | | +--Sphingomonas sp. Leaf412 (1) | | | | | | | | | +--Sphingomonas sp. Ant20 (1) | | | | | | | | | +--Sphingobium sp. C100 (1) | | | | | | | | | +--Sphingomonas hengshuiensis (1) | | | | | | | | | +--Sphingobium sp. TKS (1) | | | | | | | | | +--Sphingopyxis witflariensis (1) | | | | | | | | | +--Novosphingobium sp. Rr 2-17 (1) | | | | | | | | | +--Sphingomonas sp. KHI 67 (1) | | | | | | | | | +--Sphingomonas oligophenolica (1) | | | | | | | | | +--Sphingobium (4) | | | | | | | | | | | +--Sphingobium herbicidovorans NBRC 16415 (1) | | | | | | | | | | | +--Sphingobium czechense LL01 (1) | | | | | | | | | | | +--Sphingobium japonicum BiD32 (1) | | | | | | | | | | | +--Sphingobium ummariense RL-3 (1) | | | | | | | | | +--Pacificimonas flava (1) | | | | | | | +--Rhodobacterales (68) | | | | | | | +--Rhodobacteraceae bacterium CC-SBABM117 (1) | | | | | | | +--Rhodobacteraceae (67) | | | | | | | +--Celeribacter (1) | | | | | | | | | +--Celeribacter baekdonensis B30 (1) | | | | | | | +--Roseicyclus mahoneyensis (1) | | | | | | | +--Paracoccus alcaliphilus (1) | | | | | | | +--Rhodobacteraceae bacterium EhC02 (1) | | | | | | | +--Citreicella sp. CK-I3-6 (1) | | | | | | | +--Roseisalinus antarcticus (1) | | | | | | | +--Pararhodobacter aggregans (1) | | | | | | | +--Paracoccus sp. SM22M-07 (2) | | | | | | | +--Haematobacter massiliensis (1) | | | | | | | +--Palleronia marisminoris (1) | | | | | | | +--Rhodobaca barguzinensis (1) | | | | | | | +--Thioclava sp. SK-1 (1) | | | | | | | +--Loktanella vestfoldensis SKA53 (1) | | | | | | | +--Roseovarius halotolerans (1) | | | | | | | +--Roseovarius pacificus (1) | | | | | | | +--Paracoccus thiocyanatus (1) | | | | | | | +--Rhodobacter sp. ZS2-28 (1) | | | | | | | +--Paracoccus alkenifer (1) | | | | | | | +--Jannaschia seosinensis (2) | | | | | | | +--Citreicella thiooxidans (1) | | | | | | | +--Paracoccus aestuarii (1) | | | | | | | +--Roseivivax sp. YIM D21 (1) | | | | | | | +--Roseovarius tolerans (1) | | | | | | | +--Paracoccus sp. sw-3 (1) | | | | | | | +--Rubellimicrobium roseum (1) | | | | | | | +--Paracoccus contaminans (1) | | | | | | | +--Citreimonas salinaria (1) | | | | | | | +--Paracoccus sanguinis (1) | | | | | | | +--Roseovarius azorensis (1) | | | | | | | +--Roseivivax sp. BH87090 (1) | | | | | | | +--Loktanella fryxellensis (1) | | | | | | | +--Loktanella rosea (1) | | | | | | | +--Rhodobacter sp. EL-50 (1) | | | | | | | +--Rhodobacter sphaeroides 2.4.1 (4) | | | | | | | +--Roseivivax halotolerans (1) | | | | | | | +--Roseivivax (2) | | | | | | | | | +--Roseivivax isoporae LMG 25204 (1) | | | | | | | | | +--Roseivivax halodurans JCM 10272 (1) | | | | | | | +--Methylarcula marina (2) | | | | | | | +--Paracoccus sp. J56 (1) | | | | | | | +--Paracoccus yeei (1) | | | | | | | +--Rhodobacteraceae bacterium PD-2 (1) | | | | | | | +--Paracoccus sp. Tibet-S9a3 (1) | | | | | | | +--Catellibacterium sp. Ruye-53 (1) | | | | | | | +--Catellibacterium sp. CF17 (1) | | | | | | | +--Sulfitobacter guttiformis (1) | | | | | | | +--Roseovarius mucosus (1) | | | | | | | +--Paracoccus denitrificans PD1222 (2) | | | | | | | +--Paracoccus seriniphilus (1) | | | | | | | +--Primorskyibacter sedentarius (1) | | | | | | | +--Maritimibacter sp. HL-12 (1) | | | | | | | +--Paracoccus sp. 228 (4) | | | | | | | +--Maribius salinus (1) | | | | | | | +--Pacificibacter maritimus (1) | | | | | | | +--Salipiger (1) | | | | | | | | | +--Salipiger mucosus DSM 16094 (1) | | | | | | | +--Maribius sp. Y26 (1) | | | | | | | +--Pannonibacter phragmitetus (2) | | | | | +--Gammaproteobacteria (1) | | | | | | | +--Xanthomonadales (1) | | | | | | | +--Rhodanobacteraceae (1) | | | | | | | +--Rhodanobacter (1) | | | | | | | +--Rhodanobacter fulvus Jip2 (1) | | | | | +--alpha proteobacterium A34 (1) | | | | | +--alpha proteobacterium GRP21 (1) | | | | | +--Betaproteobacteria (5) | | | | | | | +--Burkholderiales (5) | | | | | | | +--Alcaligenaceae (5) | | | | | | | +--Pusillimonas sp. B201 (1) | | | | | | | +--Alcaligenes sp. EGD-AK7 (1) | | | | | | | +--Bordetella hinzii (1) | | | | | | | +--Pusillimonas sp. PB3-7B (2) | | | | | +--alpha proteobacterium F028-2 (1) | | | | | +--alpha proteobacterium SK200a-9 (2) | | | | | +--alpha proteobacterium USBA 355 (1) | | | +--Terrabacteriagroup (1) | | | | | +--Cyanobacteriota/Melainabacteriagroup (1) | | | | | +--Cyanobacteriota (1) | | | | | +--Cyanophyceae (1) | | | | | +--Pleurocapsales (1) | | | | | +--Pleurocapsales cyanobacterium LEGE 06147 (1) | | | +--Pseudomonadota (240) | | | +--Alphaproteobacteria (238) | | | | | +--Hyphomicrobiales (101) | | | | | | | +--Brucellaceae (2) | | | | | | | | | +--Falsochrobactrum shanghaiense (1) | | | | | | | | | +--Brucella/Ochrobactrumgroup (1) | | | | | | | | | +--Brucella endophytica (1) | | | | | | | +--Methylocystaceae (3) | | | | | | | | | +--Chenggangzhangella methanolivorans (2) | | | | | | | | | +--Hansschlegelia quercus (1) | | | | | | | +--Pleomorphomonadaceae (3) | | | | | | | | | +--Faunimonas pinastri (1) | | | | | | | | | +--Hartmannibacter diazotrophicus (1) | | | | | | | | | +--Methylobrevis albus (1) | | | | | | | +--Boseaceae (1) | | | | | | | | | +--Bosea caraganae (1) | | | | | | | +--Devosiaceae (13) | | | | | | | | | +--Youhaiella tibetensis (1) | | | | | | | | | +--Devosia aurantiaca (1) | | | | | | | | | +--Pelagibacterium lentulum (1) | | | | | | | | | +--Devosia oryzisoli (1) | | | | | | | | | +--Devosia pacifica (1) | | | | | | | | | +--Devosia litorisediminis (1) | | | | | | | | | +--Pelagibacterium lacus (1) | | | | | | | | | +--Devosia equisanguinis (1) | | | | | | | | | +--Devosia (4) | | | | | | | | | | | +--Devosia sp. YR412 (1) | | | | | | | | | | | +--Devosia sp. I507 (1) | | | | | | | | | | | +--Devosia sp. A8/3-2 (1) | | | | | | | | | | | +--Devosia sp. Root685 (1) | | | | | | | | | +--Arsenicitalea aurantiaca (1) | | | | | | | +--Phyllobacteriaceae (10) | | | | | | | | | +--Nitratireductor (1) | | | | | | | | | | | +--Nitratireductor sp. StC3 (1) | | | | | | | | | +--Aquibium carbonis (1) | | | | | | | | | +--Tianweitania sediminis (1) | | | | | | | | | +--Mesorhizobium (2) | | | | | | | | | | | +--Mesorhizobium sp. NBSH29 (1) | | | | | | | | | | | +--Mesorhizobium sp. L-8-10 (1) | | | | | | | | | +--Pseudaminobacter arsenicus (1) | | | | | | | | | +--Nitratireductor mangrovi (1) | | | | | | | | | +--Oryzicola mucosus (1) | | | | | | | | | +--Mesorhizobium sanjuanii (1) | | | | | | | | | +--Aminobacter (1) | | | | | | | | | +--Aminobacter sp. J15 (1) | | | | | | | +--Nitrobacteraceae (3) | | | | | | | | | +--Tardiphaga (2) | | | | | | | | | | | +--Tardiphaga sp. (1) | | | | | | | | | | | +--Tardiphaga sp. vice352 (1) | | | | | | | | | +--Bradyrhizobiaceae bacterium (1) | | | | | | | +--Rhizobiaceae (28) | | | | | | | | | +--Endobacterium cereale (1) | | | | | | | | | +--Ciceribacter (2) | | | | | | | | | | | +--Ciceribacter sp. L1K22 (1) | | | | | | | | | | | +--Ciceribacter selenitireducens ATCC BAA-1503 (1) | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (18) | | | | | | | | | | | +--Neorhizobium lilium (1) | | | | | | | | | | | +--Rhizobium deserti (1) | | | | | | | | | | | +--Pararhizobium mangrovi (1) | | | | | | | | | | | +--Agrobacterium (1) | | | | | | | | | | | | | +--Agrobacterium sp. AGB01 (1) | | | | | | | | | | | +--Rhizobium metallidurans (1) | | | | | | | | | | | +--Rhizobium (7) | | | | | | | | | | | | | +--Rhizobium sp. RU20A (1) | | | | | | | | | | | | | +--Rhizobium sp. NFR07 (1) | | | | | | | | | | | | | +--Rhizobium sp. AC44/96 (1) | | | | | | | | | | | | | +--Rhizobium sp. P32RR-XVIII (2) | | | | | | | | | | | | | +--Rhizobium sp. BG4 (1) | | | | | | | | | | | | | +--Rhizobium sp. BK376 (1) | | | | | | | | | | | +--Pararhizobium antarcticum (1) | | | | | | | | | | | +--Rhizobium tumorigenes (1) | | | | | | | | | | | +--Neorhizobium (3) | | | | | | | | | | | | | +--Neorhizobium sp. SOG26 (1) | | | | | | | | | | | | | +--Neorhizobiumgalegae (1) | | | | | | | | | | | | | | | +--Neorhizobium galegae bv. orientalis str. HAMBI 540 (1) | | | | | | | | | | | | | +--Neorhizobium sp. S3-V5DH (1) | | | | | | | | | | | +--Agrobacterium bohemicum (1) | | | | | | | | | +--Sinorhizobium/Ensifergroup (2) | | | | | | | | | | | +--Ensifer (1) | | | | | | | | | | | | | +--Ensifer sp. M14 (1) | | | | | | | | | | | +--Sinorhizobium (1) | | | | | | | | | | | +--Sinorhizobium sp. BG8 (1) | | | | | | | | | +--Mycoplana azooxidifex (1) | | | | | | | | | +--Georhizobium profundi (3) | | | | | | | | | +--Ciceribacter lividus (1) | | | | | | | +--Lichenihabitantaceae (1) | | | | | | | | | +--Lichenifustis flavocetrariae (1) | | | | | | | +--Breoghaniaceae (1) | | | | | | | | | +--Breoghania (1) | | | | | | | | | +--Breoghania sp. L-A4 (1) | | | | | | | +--Lichenibacteriaceae (2) | | | | | | | | | +--Lichenibacterium ramalinae (1) | | | | | | | | | +--Lichenibacterium minor (1) | | | | | | | +--Stappiaceae (3) | | | | | | | | | +--Roseibium aquae (1) | | | | | | | | | +--Stappia sediminis (1) | | | | | | | | | +--Labrenzia (1) | | | | | | | | | +--Labrenzia sp. 011 (1) | | | | | | | +--Aurantimonadaceae (14) | | | | | | | | | +--Aureimonas endophytica (2) | | | | | | | | | +--Aureimonas fodinaquatilis (1) | | | | | | | | | +--Aureimonas glaciei (2) | | | | | | | | | +--Aureimonas jatrophae (1) | | | | | | | | | +--Martelella alba (1) | | | | | | | | | +--Fulvimarina endophytica (1) | | | | | | | | | +--Aurantimonas aggregata (1) | | | | | | | | | +--Jiella endophytica (1) | | | | | | | | | +--Aurantimonas marianensis (1) | | | | | | | | | +--Aureimonas leprariae (1) | | | | | | | | | +--Aureimonas pseudogalii (1) | | | | | | | | | +--Jiella flava (1) | | | | | | | +--Parvibaculaceae (1) | | | | | | | | | +--Kaustia mangrovi (1) | | | | | | | +--Hyphomicrobiaceae (2) | | | | | | | | | +--Methyloligella (1) | | | | | | | | | | | +--Methyloligella sp. GL2 (1) | | | | | | | | | +--Limoniibacter endophyticus (1) | | | | | | | +--Xanthobacteraceae (4) | | | | | | | | | +--Ancylobacter pratisalsi (1) | | | | | | | | | +--Aquabacter (1) | | | | | | | | | | | +--Aquabacter sp. L1I39 (1) | | | | | | | | | +--Ancylobacter (1) | | | | | | | | | | | +--Ancylobacter sp. TS-1 (1) | | | | | | | | | +--Ancylobacter defluvii (1) | | | | | | | +--Salinarimonadaceae (1) | | | | | | | | | +--Salinarimonas soli (1) | | | | | | | +--Methylobacteriaceae (7) | | | | | | | | | +--Methylobacterium symbioticum (1) | | | | | | | | | +--Methylobacterium (1) | | | | | | | | | | | +--Methylobacterium sp. GXS13 (1) | | | | | | | | | +--Methylobacterium haplocladii (1) | | | | | | | | | +--Microvirga makkahensis (1) | | | | | | | | | +--Microvirga tunisiensis (2) | | | | | | | | | +--Methylobacterium radiodurans (1) | | | | | | | +--Chelatococcaceae (1) | | | | | | | | | +--Chelatococcus reniformis (1) | | | | | | | +--Beijerinckiaceae (1) | | | | | | | +--Pseudochelatococcus contaminans (1) | | | | | +--Caulobacterales (2) | | | | | | | +--Caulobacteraceae (2) | | | | | | | +--Phenylobacterium deserti (1) | | | | | | | +--Caulobacter radicis (1) | | | | | +--Rhodospirillales (13) | | | | | | | +--Acetobacteraceae (9) | | | | | | | | | +--Acidisoma silvae (1) | | | | | | | | | +--Pararoseomonas indoligenes (1) | | | | | | | | | +--Acidocella aromatica (1) | | | | | | | | | +--Acetobacteraceae bacterium H6797 (1) | | | | | | | | | +--Lichenicoccus roseus (3) | | | | | | | | | +--Pseudoroseomonas oryzae (2) | | | | | | | +--Kiloniellaceae (1) | | | | | | | | | +--Kiloniellaceae bacterium (1) | | | | | | | +--Thalassobaculaceae (1) | | | | | | | | | +--Thalassobaculum (1) | | | | | | | | | +--Thalassobaculum litoreum DSM 18839 (1) | | | | | | | +--Rhodospirillales bacterium (1) | | | | | | | +--Terasakiellaceae (1) | | | | | | | +--Terasakiella brassicae (1) | | | | | +--Sphingomonadales (63) | | | | | | | +--Sphingosinicellaceae (2) | | | | | | | | | +--Polymorphobacter glacialis (1) | | | | | | | | | +--Polymorphobacter fuscus (1) | | | | | | | +--Erythrobacteraceae (8) | | | | | | | | | +--Allopontixanthobacter sediminis (1) | | | | | | | | | +--Altererythrobacter (1) | | | | | | | | | | | +--Altererythrobacter sp. B11 (1) | | | | | | | | | +--Croceibacterium soli (1) | | | | | | | | | +--Croceibacterium xixiisoli (1) | | | | | | | | | +--Pelagerythrobacter rhizovicinus (1) | | | | | | | | | +--Croceicoccus (2) | | | | | | | | | | | +--Croceicoccus sp. YJ47 (2) | | | | | | | | | +--Aurantiacibacter xanthus (1) | | | | | | | +--Sphingomonadaceae (52) | | | | | | | | | +--Sphingomonas montanisoli (1) | | | | | | | | | +--Sphingomonas aerophila (1) | | | | | | | | | +--Sphingomonas prati (1) | | | | | | | | | +--Novosphingobium guangzhouense (1) | | | | | | | | | +--Rhizorhabdus dicambivorans (1) | | | | | | | | | +--Sphingomonas parva (1) | | | | | | | | | +--Sphingopyxis italica (1) | | | | | | | | | +--Sphingomonas carotinifaciens (1) | | | | | | | | | +--Novosphingobium chloroacetimidivorans (1) | | | | | | | | | +--Sphingomonas metalli (1) | | | | | | | | | +--Sphingobium phenoxybenzoativorans (3) | | | | | | | | | +--Novosphingobium aureum (1) | | | | | | | | | +--Novosphingobium (3) | | | | | | | | | | | +--Novosphingobium sp. 9U (1) | | | | | | | | | | | +--Novosphingobium sp. BW1 (1) | | | | | | | | | | | +--Novosphingobium sp. PhB165 (1) | | | | | | | | | +--Sphingomonas aliaeris (1) | | | | | | | | | +--Sphingomonas palmae (1) | | | | | | | | | +--Sphingomonas (14) | | | | | | | | | | | +--Sphingomonas sp. TF3 (1) | | | | | | | | | | | +--Sphingomonas parapaucimobilis NBRC 15100 (1) | | | | | | | | | | | +--Sphingomonas sp. Leaf198 (1) | | | | | | | | | | | +--Sphingomonas sp. Leaf20 (1) | | | | | | | | | | | +--Sphingomonas sp. BK345 (1) | | | | | | | | | | | +--Sphingomonas sp. NBWT7 (1) | | | | | | | | | | | +--Sphingomonas sp. S-NIH.Pt15_0812 (1) | | | | | | | | | | | +--Sphingomonas sp. CFBP 13720 (1) | | | | | | | | | | | +--Sphingomonas sp. CFBP 8760 (1) | | | | | | | | | | | +--Sphingomonas sp. AX6 (1) | | | | | | | | | | | +--Sphingomonas sp. ID1715 (1) | | | | | | | | | | | +--Sphingomonas sp. OV641 (1) | | | | | | | | | | | +--Sphingomonas sp. AAP5 (1) | | | | | | | | | | | +--Sphingomonas sp. AP4-R1 (1) | | | | | | | | | +--Novosphingobium endophyticum (1) | | | | | | | | | +--Sphingomonas baiyangensis (1) | | | | | | | | | +--Novosphingobium silvae (1) | | | | | | | | | +--Sphingomonas jatrophae (1) | | | | | | | | | +--Sphingomonas xanthus (1) | | | | | | | | | +--Sphingomonas spermidinifaciens (1) | | | | | | | | | +--Sphingomonas solaris (1) | | | | | | | | | +--Sphingomonas gellani (1) | | | | | | | | | +--Sphingobium (9) | | | | | | | | | | | +--Sphingobium sp. SCG-1 (2) | | | | | | | | | | | +--Sphingobium sp. YR768 (1) | | | | | | | | | | | +--Sphingobium sp. RAC03 (1) | | | | | | | | | | | +--Sphingobium sp. YG1 (3) | | | | | | | | | | | +--Sphingobium yanoikuyae ATCC 51230 (2) | | | | | | | | | +--Novosphingobium fluoreni (1) | | | | | | | | | +--Sphingomonas aracearum (1) | | | | | | | +--Sphingomonadales bacterium (1) | | | | | +--Rhodobacterales (59) | | | | | +--Rhodobacterales bacterium (1) | | | | | +--Roseobacteraceae (12) | | | | | | | +--Seohaeicola zhoushanensis (1) | | | | | | | +--Oceaniovalibus (2) | | | | | | | | | +--Oceaniovalibus sp. ACAM 378 (2) | | | | | | | +--Palleronia abyssalis (1) | | | | | | | +--Maritimibacter (1) | | | | | | | | | +--Maritimibacter sp. 55A14 (1) | | | | | | | +--Roseovarius litoreus (1) | | | | | | | +--Maritimibacter harenae (1) | | | | | | | +--Roseibacterium persicicum (1) | | | | | | | +--Salibaculum griseiflavum (1) | | | | | | | +--Roseovarius (1) | | | | | | | | | +--Roseovarius sp. A46 (1) | | | | | | | +--Roseovarius gahaiensis (1) | | | | | | | +--Rubellimicrobium rubrum (1) | | | | | +--Paracoccaceae (46) | | | | | +--Halovulum dunhuangense (2) | | | | | +--Rhodobacteraceae bacterium 63075 (2) | | | | | +--Rhodobacter (1) | | | | | | | +--Rhodobacter sp. 24-YEA-8 (1) | | | | | +--Neotabrizicola shimadae (1) | | | | | +--Paracoccus liaowanqingii (4) | | | | | +--Gemmobacter fulvus (1) | | | | | +--Pseudoroseicyclus tamaricis (1) | | | | | +--Pararhodobacter marinus (1) | | | | | +--Paracoccus siganidrum (1) | | | | | +--Pseudorhodobacter (1) | | | | | | | +--Pseudorhodobacter sp. PARRP1 (1) | | | | | +--Amaricoccus (1) | | | | | | | +--Amaricoccus sp. HAR-UPW-R2A-40 (1) | | | | | +--Paracoccus (2) | | | | | | | +--Paracoccus sp. R12_2 (1) | | | | | | | +--Paracoccus sp. S-4012 (1) | | | | | +--Histidinibacterium aquaticum (1) | | | | | +--Paracoccus jeotgali (1) | | | | | +--Paracoccus subflavus (1) | | | | | +--Paroceanicella profunda (1) | | | | | +--Paracoccus shanxieyensis (1) | | | | | +--Szabonella alba (1) | | | | | +--Paracoccus aurantiacus (1) | | | | | +--Paracoccaceae bacterium (1) | | | | | +--Histidinibacterium lentulum (1) | | | | | +--Cereibacter (5) | | | | | | | +--Cereibacter changlensis JA139 (5) | | | | | +--Allosediminivita pacifica (1) | | | | | +--Rhodosalinus halophilus (1) | | | | | +--Paracoccus onubensis (1) | | | | | +--Fertoeibacter niger (1) | | | | | +--Falsigemmobacter intermedius (1) | | | | | +--Frigidibacter albus (1) | | | | | +--Rhodobaculum claviforme (1) | | | | | +--Puniceibacterium antarcticum (1) | | | | | +--Paracoccus aestuariivivens (1) | | | | | +--Rhabdonatronobacter sediminivivens (1) | | | | | +--Silicimonas algicola (1) | | | | | +--Gemmobacter lutimaris (1) | | | | | +--Rhodobacteraceae bacterium W635 (1) | | | | | +--Phaeovulum (1) | | | | | +--Phaeovulum veldkampii DSM 11550 (1) | | | +--Betaproteobacteria (2) | | | +--Burkholderiales (2) | | | +--Alcaligenaceae (1) | | | | | +--Achromobacter kerstersii (1) | | | +--Comamonadaceae (1) | | | +--Lampropedia aestuarii (1) | +--Archaea (1) | +--archaeon (1)