# Species tree for RF02940 # Generated from Rfam version 15.00 | +--Eukaryota (1) | | | +--Viridiplantae (1) | | | +--Streptophyta (1) | | | +--Streptophytina (1) | | | +--Embryophyta (1) | | | +--Marchantiophyta (1) | | | +--Marchantiopsida (1) | | | +--Marchantiidae (1) | | | +--Marchantiales (1) | | | +--Marchantiaceae (1) | | | +--Marchantia (1) | | | +--Marchantia polymorpha subsp. ruderalis (1) | +--Bacteria (238) | +--Acidobacteriota (1) | | | +--Terriglobia (1) | | | +--Bryobacterales (1) | | | +--Bryobacteraceae (1) | | | +--Paludibaculum fermentans (1) | +--Thermodesulfobacteriota (5) | | | +--Desulfovibrionia (5) | | | +--Desulfovibrionales (5) | | | +--Desulfovibrionaceae (5) | | | +--Fundidesulfovibrio magnetotacticus (1) | | | +--Pseudodesulfovibrio senegalensis (1) | | | +--Pseudodesulfovibrio hydrargyri (1) | | | +--Nitratidesulfovibrio (1) | | | | | +--Nitratidesulfovibrio sp. HK-II (1) | | | +--Pseudodesulfovibrio alkaliphilus (1) | +--Proteobacteria (133) | | | +--Alphaproteobacteria (99) | | | | | +--Rhizobiales (40) | | | | | | | +--Brucellaceae (1) | | | | | | | | | +--Ochrobactrum (1) | | | | | | | | | +--Ochrobactrum intermedium 229E (1) | | | | | | | +--Aurantimonadaceae (1) | | | | | | | | | +--Martelella endophytica (1) | | | | | | | +--Phyllobacteriaceae (1) | | | | | | | | | +--Hoeflea olei (1) | | | | | | | +--Hyphomicrobiaceae (12) | | | | | | | | | +--Devosia sp. L15 (1) | | | | | | | | | +--Devosia chinhatensis (1) | | | | | | | | | +--Devosia sp. Root413D1 (1) | | | | | | | | | +--Rhodomicrobium vannielii ATCC 17100 (2) | | | | | | | | | +--Rhodoplanes roseus (1) | | | | | | | | | +--Maritalea myrionectae (1) | | | | | | | | | +--Devosia soli (1) | | | | | | | | | +--Angulomicrobium tetraedale (1) | | | | | | | | | +--Devosia geojensis (1) | | | | | | | | | +--Blastochloris viridis (1) | | | | | | | | | +--Rhodoplanes elegans (1) | | | | | | | +--Rhizobiaceae (15) | | | | | | | | | +--Kaistia (1) | | | | | | | | | | | +--Kaistia soli DSM 19436 (1) | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (14) | | | | | | | | | +--Rhizobium alkalisoli (1) | | | | | | | | | +--Pseudorhizobium pelagicum (1) | | | | | | | | | +--Agrobacterium vitis S4 (1) | | | | | | | | | +--Rhizobium cellulosilyticum (1) | | | | | | | | | +--Rhizobium borbori (1) | | | | | | | | | +--Rhizobium sp. RU36D (1) | | | | | | | | | +--Rhizobium sp. Root149 (1) | | | | | | | | | +--Agrobacterium (1) | | | | | | | | | | | +--Agrobacterium albertimagni AOL15 (1) | | | | | | | | | +--Rhizobium sp. YS-1r (1) | | | | | | | | | +--Rhizobium sp. NT-26 (1) | | | | | | | | | +--Rhizobium daejeonense (1) | | | | | | | | | +--Rhizobium etli CFN 42 (1) | | | | | | | | | +--Rhizobium oryziradicis (1) | | | | | | | | | +--Rhizobium sp. LC145 (1) | | | | | | | +--Xanthobacteraceae (3) | | | | | | | | | +--Starkeya novella DSM 506 (1) | | | | | | | | | +--Xanthobacter tagetidis (1) | | | | | | | | | +--Pseudolabrys taiwanensis (1) | | | | | | | +--Cohaesibacter sp. DQHS-21 (1) | | | | | | | +--Methylobacteriaceae (1) | | | | | | | | | +--Methylobacterium extorquens AM1 (1) | | | | | | | +--Bradyrhizobiaceae (4) | | | | | | | | | +--Rhodopseudomonas palustris CGA009 (1) | | | | | | | | | +--Bosea sp. Leaf344 (1) | | | | | | | | | +--Rhodopseudomonas rhenobacensis (1) | | | | | | | | | +--Rhodopseudomonas sp. (1) | | | | | | | +--Beijerinckiaceae (1) | | | | | | | +--Beijerinckia indica subsp. indica ATCC 9039 (1) | | | | | +--Caulobacterales (1) | | | | | | | +--Caulobacteraceae (1) | | | | | | | +--Phenylobacterium sp. Root1277 (1) | | | | | +--Rhodospirillales (8) | | | | | | | +--Rhodospirillaceae (8) | | | | | | | +--Rhodospirillum centenum SW (1) | | | | | | | +--Azospirillum sp. TSH58 (1) | | | | | | | +--Roseospira marina (1) | | | | | | | +--Telmatospirillum siberiense (1) | | | | | | | +--Pararhodospirillum (1) | | | | | | | | | +--Pararhodospirillum photometricum DSM 122 (1) | | | | | | | +--Rhodospirillum oryzae (1) | | | | | | | +--Azospirillum sp. TSO22-1 (1) | | | | | | | +--Skermanella (1) | | | | | | | +--Skermanella stibiiresistens SB22 (1) | | | | | +--Sphingomonadales (1) | | | | | | | +--Sphingomonadaceae (1) | | | | | | | +--Sphingobium sp. SYK-6 (1) | | | | | +--Rhodobacterales (49) | | | | | +--Rhodobacteraceae bacterium HTCC2083 (1) | | | | | +--Shimia marina (1) | | | | | +--Rhodobacteraceae (47) | | | | | +--Celeribacter (1) | | | | | | | +--Celeribacter baekdonensis B30 (1) | | | | | +--Loktanella tamlensis (1) | | | | | +--Thalassobius aestuarii (1) | | | | | +--Yangia sp. CCB-MM3 (1) | | | | | +--Pseudoruegeria aquimaris (1) | | | | | +--Citreicella sp. CK-I3-6 (1) | | | | | +--Rhodovulum sp. PH10 (1) | | | | | +--Pararhodobacter aggregans (1) | | | | | +--Sulfitobacter mediterraneus (1) | | | | | +--Jannaschia seohaensis (2) | | | | | +--Ruegeria sp. TM1040 (1) | | | | | +--Pelagibaca abyssi (1) | | | | | +--Pseudovibrio sp. Ad2 (1) | | | | | +--Citreicella sp. ADB (1) | | | | | +--Nautella italica (1) | | | | | +--Thalassobius mediterraneus (1) | | | | | +--Jannaschia sp. CCS1 (1) | | | | | +--Donghicola xiamenensis (1) | | | | | +--Jannaschia donghaensis (1) | | | | | +--Sulfitobacter noctilucicola (1) | | | | | +--Celeribacter neptunius (2) | | | | | +--Rhodobacter capsulatus SB 1003 (1) | | | | | +--Shimia sp. SK013 (1) | | | | | +--Ruegeria sp. ANG-S4 (1) | | | | | +--Actibacterium (1) | | | | | | | +--Actibacterium mucosum KCTC 23349 (1) | | | | | +--Gemmobacter aquatilis (1) | | | | | +--Paracoccus sp. J6 (1) | | | | | +--Jannaschia pohangensis (1) | | | | | +--Rhodobacteraceae bacterium O3.65 (1) | | | | | +--Ruegeria sp. ANG-R (2) | | | | | +--Antarctobacter sp. JLT354-W (1) | | | | | +--Oceanicola marinus (1) | | | | | +--Loktanella rosea (1) | | | | | +--Rhodobacter sphaeroides 2.4.1 (1) | | | | | +--Wenxinia (1) | | | | | | | +--Wenxinia marina DSM 24838 (1) | | | | | +--Loktanella sp. S4079 (1) | | | | | +--Rhodobacteraceae bacterium PD-2 (1) | | | | | +--Jannaschia sp. GSW-M26 (1) | | | | | +--Catellibacterium sp. Ruye-53 (1) | | | | | +--Rhodobacter sp. SW2 (1) | | | | | +--Loktanella sediminum (1) | | | | | +--Tropicibacter sp. CECT 7557 (1) | | | | | +--Thalassiobium sp. R2A62 (1) | | | | | +--Thalassococcus halodurans (1) | | | +--Gammaproteobacteria (4) | | | | | +--Alteromonadales (3) | | | | | | | +--Shewanellaceae (3) | | | | | | | +--Shewanella sediminis HAW-EB3 (1) | | | | | | | +--Shewanella woodyi ATCC 51908 (1) | | | | | | | +--Shewanella amazonensis SB2B (1) | | | | | +--Pseudomonadales (1) | | | | | +--Pseudomonadaceae (1) | | | | | +--Pseudomonas sp. FeS53a (1) | | | +--beta proteobacterium KL-9 (1) | | | +--Betaproteobacteria (18) | | | | | +--unclassifiedBetaproteobacteria (1) | | | | | | | +--beta proteobacterium AAP99 (1) | | | | | +--Burkholderiales bacterium JOSHI_001 (1) | | | | | +--Burkholderiales (12) | | | | | | | +--Paucibacter toxinivorans (1) | | | | | | | +--Inhella inkyongensis (1) | | | | | | | +--unclassifiedBurkholderiales (3) | | | | | | | | | +--BurkholderialesGeneraincertaesedis (3) | | | | | | | | | +--Ideonella sakaiensis (1) | | | | | | | | | +--Rubrivivax (1) | | | | | | | | | | | +--Rubrivivax gelatinosus IL144 (1) | | | | | | | | | +--Paucibacter sp. KCTC 42545 (1) | | | | | | | +--Piscinibacter aquaticus (1) | | | | | | | +--Methylibium subsaxonicum (1) | | | | | | | +--Burkholderiaceae (1) | | | | | | | | | +--Chitinimonas (1) | | | | | | | | | +--Chitinimonas taiwanensis DSM 18899 (1) | | | | | | | +--Ideonella dechloratans (1) | | | | | | | +--Comamonadaceae (3) | | | | | | | +--Pelomonas puraquae (1) | | | | | | | +--Rhodoferax sp. (1) | | | | | | | +--Pelomonas sp. Root1444 (1) | | | | | +--Neisseriales (4) | | | | | +--Chromobacteriaceae (1) | | | | | | | +--Chromobacteriumgroup (1) | | | | | | | +--Chromobacterium sp. LK11 (1) | | | | | +--Neisseriaceae (3) | | | | | +--Vitreoscilla sp. (1) | | | | | +--Chromobacterium violaceum ATCC 12472 (1) | | | | | +--Neisseriaceae bacterium IGB-41 (1) | | | +--Deltaproteobacteria (9) | | | | | +--Myxococcales (1) | | | | | | | +--Cystobacterineae (1) | | | | | | | +--Cystobacteraceae (1) | | | | | | | +--Cystobacter ferrugineus (1) | | | | | +--Desulfovibrionales (7) | | | | | | | +--Desulfonatronumaceae (1) | | | | | | | | | +--Desulfonatronum thiosulfatophilum (1) | | | | | | | +--Desulfovibrionaceae (6) | | | | | | | +--Desulfovibrio africanus str. Walvis Bay (1) | | | | | | | +--Desulfovibrio ferrophilus (1) | | | | | | | +--Desulfovibrio sp. FW1012B (1) | | | | | | | +--Desulfovibrio sp. X2 (1) | | | | | | | +--Desulfovibrio psychrotolerans (1) | | | | | | | +--Desulfovibrio salexigens DSM 2638 (1) | | | | | +--Syntrophobacterales (1) | | | | | +--Syntrophobacteraceae (1) | | | | | +--Syntrophobacter fumaroxidans MPOB (1) | | | +--delta/epsilonsubdivisions (2) | | | +--Deltaproteobacteria (2) | | | +--Desulfovibrionales (2) | | | +--Desulfovibrionaceae (2) | | | +--Desulfovibrio (2) | | | +--Desulfovibrio piezophilus C1TLV30 (1) | | | +--Desulfovibrio gigas DSM 1382 = ATCC 19364 (1) | +--Myxococcota (1) | | | +--Myxococcia (1) | | | +--Myxococcales (1) | | | +--Cystobacterineae (1) | | | +--Archangiaceae (1) | | | +--Vitiosangium (1) | | | +--Vitiosangium sp. (strain GDMCC 1.1324) (1) | +--Pseudomonadota (98) | +--Alphaproteobacteria (71) | | | +--Hyphomicrobiales (33) | | | | | +--Blastochloridaceae (1) | | | | | | | +--Blastochloris tepida (1) | | | | | +--Afifellaceae (1) | | | | | | | +--Afifella (1) | | | | | | | +--Afifella marina DSM 2698 (1) | | | | | +--Pleomorphomonadaceae (2) | | | | | | | +--Pleomorphomonas diazotrophica (2) | | | | | +--Ancalomicrobiaceae (1) | | | | | | | +--Siculibacillus lacustris (1) | | | | | +--Devosiaceae (3) | | | | | | | +--Youhaiella tibetensis (1) | | | | | | | +--Devosia (2) | | | | | | | +--Devosia sp. I507 (1) | | | | | | | +--Devosia sp. Root685 (1) | | | | | +--Phyllobacteriaceae (1) | | | | | | | +--Hoeflea prorocentri (1) | | | | | +--Hyphomicrobiaceae (1) | | | | | | | +--Rhodoplanes (1) | | | | | | | +--Rhodoplanes sp. (1) | | | | | +--Xanthobacteraceae (6) | | | | | | | +--Starkeya nomas (1) | | | | | | | +--Ancylobacter pratisalsi (1) | | | | | | | +--Aquabacter (1) | | | | | | | | | +--Aquabacter sp. L1I39 (1) | | | | | | | +--Xanthobacter dioxanivorans (1) | | | | | | | +--Starkeya (1) | | | | | | | | | +--Starkeya sp. ORNL1 (1) | | | | | | | +--Ancylobacter (1) | | | | | | | +--Ancylobacter sp. TS-1 (1) | | | | | +--Rhizobiaceae (12) | | | | | | | +--Endobacterium cereale (1) | | | | | | | +--Ciceribacter (1) | | | | | | | | | +--Ciceribacter sp. L1K22 (1) | | | | | | | +--Rhizobium/Agrobacteriumgroup (8) | | | | | | | | | +--Rhizobium (2) | | | | | | | | | | | +--Rhizobium sp. BK275 (1) | | | | | | | | | | | +--Rhizobium sp. NFR07 (1) | | | | | | | | | +--Rhizobium straminoryzae (1) | | | | | | | | | +--Neorhizobium lilium (1) | | | | | | | | | +--Neorhizobium (3) | | | | | | | | | | | +--Neorhizobium sp. SOG26 (1) | | | | | | | | | | | +--Neorhizobiumgalegae (1) | | | | | | | | | | | | | +--Neorhizobium galegae bv. orientalis str. HAMBI 540 (1) | | | | | | | | | | | +--Neorhizobium sp. S3-V5DH (1) | | | | | | | | | +--Rhizobium deserti (1) | | | | | | | +--Ciceribacter lividus (1) | | | | | | | +--Gellertiella hungarica (1) | | | | | +--Methylobacteriaceae (5) | | | | | +--Microvirga thermotolerans (1) | | | | | +--Methylobacterium oryzihabitans (1) | | | | | +--Methylobacterium terrae (1) | | | | | +--Microvirga alba (1) | | | | | +--Methylobacterium radiodurans (1) | | | +--Caulobacterales (2) | | | | | +--Caulobacteraceae (2) | | | | | +--Phenylobacterium parvum (1) | | | | | +--Phenylobacterium glaciei (1) | | | +--Rhodospirillales (5) | | | | | +--Azospirillaceae (3) | | | | | | | +--Azospirillum (1) | | | | | | | | | +--Azospirillum sp. RU38E (1) | | | | | | | +--Niveispirillum lacus (1) | | | | | | | +--Azospirillum thermophilum (1) | | | | | +--Rhodospirillaceae (2) | | | | | +--Magnetospirillum (1) | | | | | | | +--Magnetospirillum aberrantis SpK (1) | | | | | +--Rhodospirillaceae bacterium B3 (1) | | | +--Hyphomonadales (1) | | | | | +--Hyphomonadaceae (1) | | | | | +--Hyphomonas (1) | | | | | +--Hyphomonas sp. CY54-11-8 (1) | | | +--Sphingomonadales (1) | | | | | +--Sphingosinicellaceae (1) | | | | | +--Sandaracinobacter neustonicus (1) | | | +--Kordiimonadales (1) | | | | | +--Kordiimonadaceae (1) | | | | | +--Kordiimonas sediminis (1) | | | +--Rhodobacterales (28) | | | +--Roseobacteraceae (8) | | | | | +--Sulfitobacter (1) | | | | | | | +--Sulfitobacter sp. SK012 (1) | | | | | +--Thalassococcus (2) | | | | | | | +--Thalassococcus sp. S3 (2) | | | | | +--Loktanella (1) | | | | | | | +--Loktanella sp. IMCC34160 (1) | | | | | +--Shimia abyssi (1) | | | | | +--Salipiger pallidus (1) | | | | | +--Celeribacter ethanolicus (1) | | | | | +--Epibacterium ulvae (1) | | | +--Paracoccaceae (20) | | | +--Zongyanglinia huanghaiensis (1) | | | +--Pseudoprimorskyibacter insulae (1) | | | +--Yoonia litorea (1) | | | +--Neotabrizicola shimadae (1) | | | +--Histidinibacterium lentulum (1) | | | +--Allosediminivita pacifica (1) | | | +--Cereibacter (1) | | | | | +--Cereibacter changlensis JA139 (1) | | | +--Pararhodobacter marinus (1) | | | +--Tritonibacter litoralis (1) | | | +--Paenihalocynthiibacter styelae (1) | | | +--Frigidibacter albus (1) | | | +--Yoonia sediminilitoris (1) | | | +--Paracoccus tegillarcae (1) | | | +--Histidinibacterium aquaticum (1) | | | +--Gemmobacter aquarius (1) | | | +--Algicella marina (1) | | | +--Tritonibacter aquimaris (1) | | | +--Fuscovulum (1) | | | | | +--Fuscovulum blasticum DSM 2131 (1) | | | +--Rhodovulum (1) | | | | | +--Rhodovulum sp. BSW8 (1) | | | +--Rubricella aquisinus (1) | +--Gammaproteobacteria (2) | | | +--Alteromonadales (1) | | | | | +--Shewanellaceae (1) | | | | | +--Shewanella salipaludis (1) | | | +--Steroidobacterales (1) | | | +--Steroidobacteraceae (1) | | | +--Steroidobacter agaridevorans (1) | +--Betaproteobacteria (25) | +--Burkholderiales (18) | | | +--Burkholderiales bacterium PBB4 (1) | | | +--Burkholderialesgeneraincertaesedis (1) | | | | | +--Rhizobacter (1) | | | | | +--Rhizobacter sp. AJA081-3 (1) | | | +--Burkholderiales bacterium PBB3 (1) | | | +--Burkholderiales bacterium PBB5 (1) | | | +--Comamonadaceae (3) | | | | | +--Rhodoferax (1) | | | | | | | +--Rhodoferax sp. AJA081-3 (1) | | | | | +--Caenimonas (1) | | | | | | | +--Caenimonas koreensis DSM 17982 (1) | | | | | +--Ramlibacter (1) | | | | | +--Ramlibacter sp. WS9 (1) | | | +--Sphaerotilaceae (11) | | | +--Inhella gelatinilytica (1) | | | +--Inhella crocodyli (1) | | | +--Rubrivivax pictus (1) | | | +--Rubrivivax albus (1) | | | +--Ideonella (1) | | | | | +--Ideonella sp. MAG2 (1) | | | +--Scleromatobacter humisilvae (1) | | | +--Inhella proteolytica (1) | | | +--Roseateles (3) | | | | | +--Roseateles sp. DAIF2 (1) | | | | | +--Paucibacter sp. KBW04 (1) | | | | | +--Mitsuaria sp. WAJ17 (1) | | | +--Ideonella aquatica (1) | +--Rhodocyclales (1) | | | +--Rhodocyclaceae (1) | | | +--Niveibacterium umoris (1) | +--Neisseriales (5) | | | +--Leeiaceae (1) | | | | | +--Leeia aquatica (1) | | | +--Chromobacteriaceae (1) | | | | | +--Paludibacterium purpuratum (1) | | | +--Chitinibacteraceae (3) | | | +--Chitinimonas (1) | | | | | +--Chitinimonas sp. BJB300 (1) | | | +--Chitinimonas arctica (1) | | | +--Chitiniphilus eburneus (1) | +--Nitrosomonadales (1) | +--Usitatibacteraceae (1) | +--Usitatibacter rugosus (1)