# Species tree for RF02893 # Generated from Rfam version 15.00 | +--Eukaryota (5) | | | +--Metazoa (4) | | | | | +--Chordata (3) | | | | | | | +--Craniata (3) | | | | | | | +--Vertebrata (3) | | | | | | | +--Euteleostomi (3) | | | | | | | +--Archosauria (3) | | | | | | | +--Dinosauria (3) | | | | | | | +--Saurischia (3) | | | | | | | +--Theropoda (3) | | | | | | | +--Coelurosauria (3) | | | | | | | +--Aves (3) | | | | | | | +--Neognathae (3) | | | | | | | +--Passeriformes (3) | | | | | | | +--Corvoidea (1) | | | | | | | | | +--Irenidae (1) | | | | | | | | | +--Chloropsis hardwickii (1) | | | | | | | +--Sittidae (1) | | | | | | | | | +--Tichodroma muraria (1) | | | | | | | +--Timaliidae (1) | | | | | | | +--Pteruthius melanotis (1) | | | | | +--Arthropoda (1) | | | | | +--Hexapoda (1) | | | | | +--Insecta (1) | | | | | +--Pterygota (1) | | | | | +--Neoptera (1) | | | | | +--Endopterygota (1) | | | | | +--Diptera (1) | | | | | +--Brachycera (1) | | | | | +--Muscomorpha (1) | | | | | +--Oestroidea (1) | | | | | +--Calliphoridae (1) | | | | | +--Luciliinae (1) | | | | | +--Lucilia cuprina (1) | | | +--Viridiplantae (1) | | | +--Streptophyta (1) | | | +--Embryophyta (1) | | | +--Tracheophyta (1) | | | +--Spermatophyta (1) | | | +--Magnoliophyta (1) | | | +--Liliopsida (1) | | | +--Poales (1) | | | +--Poaceae (1) | | | +--BEPclade (1) | | | +--Ehrhartoideae (1) | | | +--Oryzeae (1) | | | +--Oryza sativa Indica Group (1) | +--Bacteria (248) | | | +--unclassifiedBacteria (1) | | | | | +--bacteria symbiont BFo2 of Frankliniella occidentalis (1) | | | +--Proteobacteria (167) | | | | | +--Gammaproteobacteria (167) | | | | | +--Orbus hercynius (1) | | | | | +--Pasteurellales (17) | | | | | | | +--Haemophilus felis (1) | | | | | | | +--Bisgaard Taxon 5 (1) | | | | | | | +--Bisgaard Taxon 40 (1) | | | | | | | +--Pasteurellaceae (13) | | | | | | | | | +--Pasteurella multocida subsp. multocida str. Pm70 (1) | | | | | | | | | +--Gallibacterium salpingitidis (1) | | | | | | | | | +--Actinobacillus delphinicola (1) | | | | | | | | | +--Volucribacter psittacicida (1) | | | | | | | | | +--Chelonobacter oris (1) | | | | | | | | | +--Lonepinella koalarum (1) | | | | | | | | | +--Histophilus somni (1) | | | | | | | | | +--Pasteurella (1) | | | | | | | | | | | +--Pasteurella bettyae CCUG 2042 (1) | | | | | | | | | +--Haemophilus influenzae Rd KW20 (1) | | | | | | | | | +--Haemophilus pittmaniae (1) | | | | | | | | | +--Avibacterium volantium (1) | | | | | | | | | +--Aggregatibacter segnis ATCC 33393 (1) | | | | | | | | | +--Bisgaardia hudsonensis (1) | | | | | | | +--Bisgaard Taxon 7 (1) | | | | | +--Enterobacterales (28) | | | | | | | +--Yersiniaceae (4) | | | | | | | | | +--Serratia sp. DD3 (1) | | | | | | | | | +--Ewingella (1) | | | | | | | | | | | +--Ewingella americana ATCC 33852 (1) | | | | | | | | | +--Rahnella (1) | | | | | | | | | | | +--Rahnella aquatilis CIP 78.65 = ATCC 33071 (1) | | | | | | | | | +--Chania (1) | | | | | | | | | +--Chania multitudinisentens RB-25 (1) | | | | | | | +--Pectobacteriaceae (2) | | | | | | | | | +--Sodalis praecaptivus (1) | | | | | | | | | +--Sodalis sp. TME1 (1) | | | | | | | +--Morganellaceae (5) | | | | | | | | | +--Moellerella (1) | | | | | | | | | | | +--Moellerella wisconsensis ATCC 35017 (1) | | | | | | | | | +--Xenorhabdus (2) | | | | | | | | | | | +--Xenorhabdus bovienii str. kraussei Quebec (1) | | | | | | | | | | | +--Xenorhabdus szentirmaii DSM 16338 (1) | | | | | | | | | +--Morganella (1) | | | | | | | | | | | +--Morganellamorganii (1) | | | | | | | | | | | +--Morganella morganii subsp. morganii KT (1) | | | | | | | | | +--Providencia (1) | | | | | | | | | +--Providencia sneebia DSM 19967 (1) | | | | | | | +--Enterobacteriaceae (11) | | | | | | | | | +--Escherichia (1) | | | | | | | | | | | +--Escherichia vulneris NBRC 102420 (1) | | | | | | | | | +--Klebsiella sp. RIT-PI-d (1) | | | | | | | | | +--unclassifiedEnterobacteriaceae (5) | | | | | | | | | | | +--ant,tsetse,mealybug,aphid,etc.endosymbionts (4) | | | | | | | | | | | | | +--Candidatus Hoaglandella endobia (1) | | | | | | | | | | | | | +--secondary endosymbiont of Ctenarytaina eucalypti (1) | | | | | | | | | | | | | +--Candidatus Doolittlea endobia (1) | | | | | | | | | | | | | +--Candidatus Gullanella endobia (1) | | | | | | | | | | | +--Enterobacteriaceae bacterium strain FGI 57 (1) | | | | | | | | | +--Klebsiella michiganensis (1) | | | | | | | | | +--Buttiauxella (1) | | | | | | | | | | | +--Buttiauxella agrestis ATCC 33320 (1) | | | | | | | | | +--Mangrovibacter sp. MFB070 (1) | | | | | | | | | +--Atlantibacter (1) | | | | | | | | | +--Atlantibacter hermannii NBRC 105704 (1) | | | | | | | +--unclassifiedEnterobacterales (1) | | | | | | | | | +--Plesiomonas (1) | | | | | | | | | +--Plesiomonas shigelloides 302-73 (1) | | | | | | | +--Erwiniaceae (4) | | | | | | | | | +--Erwinia iniecta (1) | | | | | | | | | +--Erwinia sp. Leaf53 (1) | | | | | | | | | +--Erwinia gerundensis (1) | | | | | | | | | +--Tatumella (1) | | | | | | | | | +--Tatumella ptyseos ATCC 33301 (1) | | | | | | | +--Hafniaceae (1) | | | | | | | +--Hafnia (1) | | | | | | | +--Hafnia alvei FB1 (1) | | | | | +--Aeromonadales (2) | | | | | | | +--Aeromonadaceae (2) | | | | | | | +--Aeromonas simiae (1) | | | | | | | +--Aeromonas hydrophila subsp. hydrophila ATCC 7966 (1) | | | | | +--Orbales (3) | | | | | | | +--Orbaceae (3) | | | | | | | +--Frischella perrara (1) | | | | | | | +--CandidatusSchmidhempelia (1) | | | | | | | | | +--Candidatus Schmidhempelia bombi str. Bimp (1) | | | | | | | +--Gilliamella apicola (1) | | | | | +--Alteromonadales (7) | | | | | | | +--Ferrimonadaceae (2) | | | | | | | | | +--Paraferrimonas sedimenticola (1) | | | | | | | | | +--Ferrimonas marina (1) | | | | | | | +--Shewanellaceae (3) | | | | | | | | | +--Shewanella frigidimarina NCIMB 400 (1) | | | | | | | | | +--Shewanella mangrovi (1) | | | | | | | | | +--Shewanella fodinae (1) | | | | | | | +--Psychromonadaceae (1) | | | | | | | | | +--Psychromonas ingrahamii 37 (1) | | | | | | | +--Alteromonadaceae (1) | | | | | | | +--Agarivorans (1) | | | | | | | +--Agarivorans albus MKT 106 (1) | | | | | +--Vibrionales (36) | | | | | | | +--Vibrionaceae (36) | | | | | | | +--Photobacterium jeanii (1) | | | | | | | +--Vibrio palustris (1) | | | | | | | +--Vibrio sp. R-40493 (2) | | | | | | | +--Vibrio sp. G21 (1) | | | | | | | +--Vibrio furnissii (1) | | | | | | | +--Photobacterium lipolyticum (1) | | | | | | | +--Vibrio sp. qd031 (1) | | | | | | | +--Vibrio navarrensis (1) | | | | | | | +--Candidatus Photodesmus blepharus (1) | | | | | | | +--Photobacterium profundum SS9 (1) | | | | | | | +--Vibrio caribbenthicus ATCC BAA-2122 (1) | | | | | | | +--Photobacterium sp. Gung47 (1) | | | | | | | +--Enterovibrio coralii (1) | | | | | | | +--Vibrio sp. S2757 (1) | | | | | | | +--Vibrio nigripulchritudo (1) | | | | | | | +--Vibrio cholerae O1 biovar El Tor str. N16961 (1) | | | | | | | +--Photobacterium ganghwense (1) | | | | | | | +--Photobacterium proteolyticum (1) | | | | | | | +--Vibrio nereis (1) | | | | | | | +--Vibrio sp. F10 (1) | | | | | | | +--Vibrio fischeri ES114 (1) | | | | | | | +--Salinivibrio sp. KP-1 (1) | | | | | | | +--Photobacterium halotolerans (1) | | | | | | | +--Vibrio ishigakensis (1) | | | | | | | +--Vibrio parahaemolyticus RIMD 2210633 (1) | | | | | | | +--Photobacterium sp. CECT 7614 (1) | | | | | | | +--Grimontia hollisae CIP 101886 (1) | | | | | | | +--Vibrio (5) | | | | | | | | | +--Vibrio rumoiensis 1S-45 (1) | | | | | | | | | +--Vibrioharveyigroup (1) | | | | | | | | | | | +--Vibrio azureus NBRC 104587 (1) | | | | | | | | | +--Vibrio genomosp. F6 str. FF-238 (1) | | | | | | | | | +--Vibrio proteolyticus NBRC 13287 (1) | | | | | | | | | +--Vibrio aerogenes CECT 7868 (1) | | | | | | | +--Enterovibrio sp. sw014 (1) | | | | | | | +--Photobacterium aquimaris (1) | | | | | | | +--Photobacterium damselae subsp. damselae CIP 102761 (1) | | | | | +--Enterobacteriales (73) | | | | | +--primary endosymbiont of Sitophilus oryzae (1) | | | | | +--Enterobacteriaceae (72) | | | | | +--Serratia fonticola (1) | | | | | +--Dickeya dadantii 3937 (1) | | | | | +--Xenorhabdus japonica (1) | | | | | +--Cedecea neteri (1) | | | | | +--Leminorella richardii (1) | | | | | +--Salmonella (1) | | | | | | | +--Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1) | | | | | +--Pectobacterium atrosepticum SCRI1043 (1) | | | | | +--Arsenophonus endosymbiont of Aleurodicus dispersus (1) | | | | | +--Serratia rubidaea (1) | | | | | +--Escherichia coli K-12 (1) | | | | | +--Biostraticola tofi (1) | | | | | +--Shigella dysenteriae Sd197 (1) | | | | | +--Escherichia coli O83:H1 str. NRG 857C (1) | | | | | +--aphidsecondarysymbionts (3) | | | | | | | +--Candidatus Regiella insecticola R5.15 (1) | | | | | | | +--Candidatus Regiella insecticola LSR1 (1) | | | | | | | +--Hamiltonella endosymbiont of Bemisia tabaci (1) | | | | | +--Kluyvera cryocrescens (1) | | | | | +--Shigella sonnei Ss046 (1) | | | | | +--Escherichia coli O127:H6 str. E2348/69 (1) | | | | | +--Erwinia tasmaniensis (1) | | | | | +--Gibbsiella quercinecans (1) | | | | | +--Xenorhabdus koppenhoeferi (1) | | | | | +--Tatumella morbirosei (1) | | | | | +--Enterobacter gergoviae (1) | | | | | +--Escherichia coli APEC O1 (1) | | | | | +--Escherichia coli BL21(DE3) (1) | | | | | +--Photorhabdus luminescens subsp. laumondii TTO1 (1) | | | | | +--Serratia ficaria (1) | | | | | +--Escherichia coli CFT073 (1) | | | | | +--Erwinia billingiae (1) | | | | | +--Shigella flexneri 2a str. 301 (1) | | | | | +--Edwardsiella hoshinae (1) | | | | | +--Citrobacter rodentium ICC168 (1) | | | | | +--Serratia (1) | | | | | | | +--Serratia symbiotica str. Tucson (1) | | | | | +--Escherichia blattae DSM 4481 (1) | | | | | +--Lonsdalea quercina (1) | | | | | +--Brenneria rubrifaciens (1) | | | | | +--Shigella boydii CDC 3083-94 (1) | | | | | +--Sodalis glossinidius str. 'morsitans' (1) | | | | | +--secondary endosymbiont of Heteropsylla cubana (1) | | | | | +--Serratia sp. ATCC 39006 (1) | | | | | +--Escherichia coli 55989 (1) | | | | | +--Trabulsiella odontotermitis (1) | | | | | +--Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- (1) | | | | | +--Pantoea ananatis LMG 20103 (1) | | | | | +--Escherichia coli E24377A (1) | | | | | +--Xenorhabdus innexi (1) | | | | | +--Escherichia coli O157:H7 (1) | | | | | +--Salmonella enterica subsp. arizonae (1) | | | | | +--Pantoea agglomerans (1) | | | | | +--Pantoea vagans (1) | | | | | +--Candidatus Moranella endobia PCIT (1) | | | | | +--Yersinia ruckeri (1) | | | | | +--Serratia odorifera DSM 4582 (1) | | | | | +--Budvicia aquatica (1) | | | | | +--Enterobacter sp. 638 (1) | | | | | +--Citrobacter freundii (1) | | | | | +--Arsenophonus nasoniae (son-killer infecting Nasonia vitripennis) (1) | | | | | +--Xenorhabdus cabanillasii (1) | | | | | +--Escherichia coli HS (1) | | | | | +--Enterobacter (1) | | | | | | | +--Enterobacter cloacae SCF1 (1) | | | | | +--Citrobacter koseri ATCC BAA-895 (1) | | | | | +--Yersinia pestis CO92 (1) | | | | | +--Brenneria goodwinii (1) | | | | | +--Cronobacter sakazakii ATCC BAA-894 (1) | | | | | +--Erwinia mallotivora (1) | | | | | +--Candidatus Erwinia dacicola (1) | | | | | +--Providencia stuartii (1) | | | | | +--Escherichia coli S88 (1) | | | | | +--Erwinia tracheiphila (1) | | | | | +--Salmonella enterica subsp. enterica serovar Poona (1) | | | | | +--Klebsiella pneumoniae subsp. ozaenae (1) | | | +--Pseudomonadota (80) | | | +--Gammaproteobacteria (80) | | | +--Alteromonadales (14) | | | | | +--Moritellaceae (1) | | | | | | | +--Moritella (1) | | | | | | | +--Moritella sp. Urea-trap-13 (1) | | | | | +--Alteromonadalesgeneraincertaesedis (1) | | | | | | | +--Motilimonas pumila (1) | | | | | +--Ferrimonadaceae (4) | | | | | | | +--Ferrimonas aestuarii (1) | | | | | | | +--Ferrimonas sediminicola (1) | | | | | | | +--Ferrimonas lipolytica (1) | | | | | | | +--Paraferrimonas haliotis (1) | | | | | +--Shewanellaceae (2) | | | | | | | +--Parashewanella curva (1) | | | | | | | +--Shewanella aestuarii (1) | | | | | +--Psychromonadaceae (5) | | | | | | | +--Corallincola holothuriorum (1) | | | | | | | +--Psychromonas (4) | | | | | | | +--Psychromonas sp. psych-6C06 (1) | | | | | | | +--Psychromonas sp. RZ22 (1) | | | | | | | +--Psychromonas sp. Urea-02u-13 (1) | | | | | | | +--Psychromonas sp. RZ5 (1) | | | | | +--Alteromonadaceae (1) | | | | | +--Alginatibacterium sediminis (1) | | | +--Pasteurellales (3) | | | | | +--Pasteurellaceae (3) | | | | | +--Cricetibacter osteomyelitidis (1) | | | | | +--Mesocricetibacter intestinalis (1) | | | | | +--Rodentibacter trehalosifermentans (1) | | | +--Vibrionales (19) | | | | | +--Vibrionaceae (19) | | | | | +--Vibrio thalassae (1) | | | | | +--Vibrio viridaestus (1) | | | | | +--Vibrio ziniensis (1) | | | | | +--Vibrio eleionomae (1) | | | | | +--Candidatus Enterovibrio luxaltus (1) | | | | | +--Vibrio agarilyticus (1) | | | | | +--Vibrio toranzoniae (1) | | | | | +--Vibrio ostreae (1) | | | | | +--Vibrio paucivorans (1) | | | | | +--Veronia nyctiphanis (1) | | | | | +--Vibrio aquimaris (1) | | | | | +--Vibrio gelatinilyticus (1) | | | | | +--Candidatus Enterovibrio escacola (1) | | | | | +--Vibrio (5) | | | | | | | +--Vibrio tapetis subsp. tapetis (1) | | | | | | | +--Vibrio sp. V28_P6S34P95 (1) | | | | | | | +--Vibrio sp. HA2012 (1) | | | | | | | +--Vibrio ruber DSM 16370 (1) | | | | | | | +--Vibrio sp. 10N.286.49.B3 (1) | | | | | +--Paraphotobacterium marinum (1) | | | +--Enterobacterales (43) | | | | | +--Yersiniaceae (3) | | | | | | | +--Rouxiella badensis (1) | | | | | | | +--Chimaeribacter arupi (1) | | | | | | | +--Candidatus Fukatsuia symbiotica (1) | | | | | +--Enterobacteriaceae (11) | | | | | | | +--Jejubacter calystegiae (1) | | | | | | | +--Kosakonia (1) | | | | | | | | | +--Kosakonia cowanii JCM 10956 = DSM 18146 (1) | | | | | | | +--Candidatus Profftia tarda (1) | | | | | | | +--Tenebrionibacter/Tenebrionicolagroup (1) | | | | | | | | | +--Tenebrionibacter intestinalis (1) | | | | | | | +--Citrobacter (1) | | | | | | | | | +--Citrobacter sp. JGM124 (1) | | | | | | | +--Kluyvera genomosp. 3 (1) | | | | | | | +--Klebsiella/Raoultellagroup (2) | | | | | | | | | +--Klebsiella indica (1) | | | | | | | | | +--Klebsiella (1) | | | | | | | | | +--Klebsiellapneumoniae (1) | | | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae (strain HS11286) (1) | | | | | | | +--Enterobacteriaceae bacterium RIT714 (1) | | | | | | | +--Enterobacteriaceaeincertaesedis (2) | | | | | | | +--ant,tsetse,mealybug,aphid,etc.endosymbionts (2) | | | | | | | +--Symbiopectobacterium (2) | | | | | | | +--Candidatus Symbiopectobacterium sp. Dall1.0 (1) | | | | | | | +--Candidatus Symbiopectobacterium sp. PLON1 (1) | | | | | +--Enterobacterales bacterium CwR94 (1) | | | | | +--Thorselliaceae (1) | | | | | | | +--Thorsellia (1) | | | | | | | +--Thorsellia anophelis DSM 18579 (1) | | | | | +--Hafniaceae (1) | | | | | | | +--Enterobacillus tribolii (1) | | | | | +--Pectobacteriaceae (2) | | | | | | | +--Affinibrenneria salicis (1) | | | | | | | +--Acerihabitans arboris (1) | | | | | +--Morganellaceae (6) | | | | | | | +--Providencia (1) | | | | | | | | | +--Providencia heimbachae ATCC 35613 (1) | | | | | | | +--Proteus (1) | | | | | | | | | +--Proteus myxofaciens ATCC 19692 (1) | | | | | | | +--Arsenophonus (4) | | | | | | | +--Arsenophonus endosymbiont of Aphis craccivora (1) | | | | | | | +--Arsenophonus sp. ENCA (1) | | | | | | | +--unclassifiedArsenophonus (1) | | | | | | | | | +--Arsenophonus endosymbiont of Bemisia tabaci Q2 (1) | | | | | | | +--Arsenophonus endosymbiont of Aleurodicus floccissimus (1) | | | | | +--Budviciaceae (1) | | | | | | | +--Limnobaculum parvum (1) | | | | | +--Erwiniaceae (11) | | | | | | | +--Izhakiella capsodis (1) | | | | | | | +--Pantoea alhagi (1) | | | | | | | +--Erwinia sorbitola (1) | | | | | | | +--Erwiniaceae bacterium PD-1 (1) | | | | | | | +--Erwinia (2) | | | | | | | | | +--Erwinia sp. 198 (1) | | | | | | | | | +--Erwinia sp. OLSSP12 (1) | | | | | | | +--Pantoea (4) | | | | | | | | | +--Pantoea sp. M_5 (1) | | | | | | | | | +--Pantoea sp. Nvir (1) | | | | | | | | | +--Pantoea sp. Eser (1) | | | | | | | | | +--Pantoea sp. Aalb (1) | | | | | | | +--[Pantoea] beijingensis (1) | | | | | +--Bruguierivoracaceae (6) | | | | | +--Sodalis ligni (1) | | | | | +--Sodalis (5) | | | | | +--Sodalis-like endosymbiont of Proechinophthirus fluctus (1) | | | | | +--Sodalis-like symbiont of Bactericera trigonica (1) | | | | | +--Sodalis sp. Fse (1) | | | | | +--Sodalis endosymbiont of Henestaris halophilus (1) | | | | | +--Sodalis-like symbiont of Philaenus spumarius (1) | | | +--Orbales (1) | | | +--Orbaceae (1) | | | +--Zophobihabitans entericus (1) | +--Plautia stali symbiont (1)