# Species tree for RF02837 # Generated from Rfam version 15.00 | +--Eukaryota (6) | | | +--Metazoa (1) | | | | | +--Arthropoda (1) | | | | | +--Crustacea (1) | | | | | +--Ostracoda (1) | | | | | +--Podocopa (1) | | | | | +--Podocopida (1) | | | | | +--Darwinulocopina (1) | | | | | +--Darwinuloidea (1) | | | | | +--Darwinulidae (1) | | | | | +--Darwinula stevensoni (1) | | | +--Fungi (2) | | | | | +--Dikarya (1) | | | | | | | +--Ascomycota (1) | | | | | | | +--Pezizomycotina (1) | | | | | | | +--Eurotiomycetes (1) | | | | | | | +--Eurotiomycetidae (1) | | | | | | | +--Eurotiales (1) | | | | | | | +--Elaphomycetaceae (1) | | | | | | | +--Elaphomyces granulatus (1) | | | | | +--Fungiincertaesedis (1) | | | | | +--Basalfungallineages (1) | | | | | +--Mucoromycotina (1) | | | | | +--Mortierellales (1) | | | | | +--Mortierellaceae (1) | | | | | +--Mortierella gamsii (1) | | | +--Viridiplantae (2) | | | | | +--Streptophyta (2) | | | | | +--Embryophyta (2) | | | | | +--Tracheophyta (2) | | | | | +--Spermatophyta (2) | | | | | +--Magnoliophyta (2) | | | | | +--Liliopsida (1) | | | | | | | +--Arecaceae (1) | | | | | | | +--Arecoideae (1) | | | | | | | +--Cocoseae (1) | | | | | | | +--Elaeidinae (1) | | | | | | | +--Elaeis guineensis (African oil palm) (1) | | | | | +--eudicotyledons (1) | | | | | +--coreeudicotyledons (1) | | | | | +--rosids (1) | | | | | +--malvids (1) | | | | | +--Malvales (1) | | | | | +--Malvaceae (1) | | | | | +--Grewioideae (1) | | | | | +--Corchorus olitorius (1) | | | +--Opisthokonta (1) | | | +--Fungi (1) | | | +--Fungiincertaesedis (1) | | | +--Mucoromycota (1) | | | +--Mucoromycotina (1) | | | +--Mucoromycetes (1) | | | +--Mucorales (1) | | | +--Mucorineae (1) | | | +--Mucoraceae (1) | | | +--Apophysomyces (1) | | | +--Apophysomyces sp. BC1034 (1) | +--Bacteria (473) | +--Proteobacteria (248) | | | +--Gammaproteobacteria (9) | | | | | +--Solimonas sp. NAA16 (1) | | | | | +--Immundisolibacterales (2) | | | | | | | +--Immundisolibacteraceae (2) | | | | | | | +--Immundisolibacter cernigliae (2) | | | | | +--Xanthomonadales (2) | | | | | | | +--Xanthomonadaceae (2) | | | | | | | +--Panacagrimonas perspica (2) | | | | | +--Chromatiales (3) | | | | | | | +--Ectothiorhodospiraceae (3) | | | | | | | +--Ectothiorhodospira mobilis (1) | | | | | | | +--Thioalkalivibrio sulfidophilus HL-EbGr7 (1) | | | | | | | +--Thioalkalivibrio denitrificans (1) | | | | | +--Nevskiales (1) | | | | | +--Sinobacteraceae (1) | | | | | +--Hydrocarboniphaga (1) | | | | | +--Hydrocarboniphaga effusa AP103 (1) | | | +--beta proteobacterium KL-9 (1) | | | +--Betaproteobacteria (238) | | | +--unclassifiedBetaproteobacteria (10) | | | | | +--beta proteobacterium AAP65 (1) | | | | | +--Candidatus Accumulibacter aalborgensis (1) | | | | | +--beta proteobacterium AAP99 (1) | | | | | +--Betaproteobacteria bacterium MOLA814 (1) | | | | | +--Candidatus Accumulibacter sp. BA-94 (1) | | | | | +--Candidatus Accumulibacter sp. BA-93 (1) | | | | | +--Candidatus Accumulibacter sp. SK-11 (1) | | | | | +--Betaproteobacteria bacterium UKL13-2 (1) | | | | | +--Candidatus Accumulibacter sp. SK-12 (1) | | | | | +--Candidatus Accumulibacter sp. SK-02 (1) | | | +--Methylophilales (7) | | | | | +--Methylophilaceae (7) | | | | | +--Methylovorus glucosetrophus SIP3-4 (1) | | | | | +--Candidatus Methylopumilus turicensis (1) | | | | | +--Methylovorus sp. MM1 (1) | | | | | +--Methylobacillus sp. MM2 (1) | | | | | +--Methylobacillus flagellatus KT (1) | | | | | +--Methylophilaceae bacterium 11 (1) | | | | | +--Methylotenera versatilis 301 (1) | | | +--Burkholderiales (155) | | | | | +--Thiomonas sp. S10 (1) | | | | | +--Rubrivivax sp. (1) | | | | | +--Roseateles depolymerans (1) | | | | | +--Tepidicella xavieri (1) | | | | | +--Leptothrix cholodnii SP-6 (1) | | | | | +--Tepidimonas taiwanensis (1) | | | | | +--Leptothrix mobilis (1) | | | | | +--Piscinibacter aquaticus (1) | | | | | +--Methylibium subsaxonicum (1) | | | | | +--Sphaerotilus montanus (1) | | | | | +--Comamonadaceae (61) | | | | | | | +--Rhodoferax sp. (1) | | | | | | | +--Comamonas terrigena (1) | | | | | | | +--Comamonas denitrificans (1) | | | | | | | +--Ramlibacter tataouinensis TTB310 (1) | | | | | | | +--Pseudacidovorax intermedius (1) | | | | | | | +--Variovorax sp. JS1663 (1) | | | | | | | +--Variovorax paradoxus (1) | | | | | | | +--Rhodoferax ferrireducens T118 (1) | | | | | | | +--Acidovorax caeni (1) | | | | | | | +--Polaromonas sp. CG9_12 (1) | | | | | | | +--Pseudorhodoferax sp. Leaf267 (1) | | | | | | | +--Acidovorax sp. CF316 (1) | | | | | | | +--Variovorax sp. PBL-E5 (1) | | | | | | | +--Hydrogenophaga crassostreae (1) | | | | | | | +--Limnohabitans sp. Rim28 (1) | | | | | | | +--Comamonas (1) | | | | | | | | | +--Comamonas aquatica DA1877 (1) | | | | | | | +--Polaromonas vacuolata (1) | | | | | | | +--Variovorax sp. Root473 (1) | | | | | | | +--Diaphorobacter sp. J5-51 (1) | | | | | | | +--Acidovorax sp. MR-S7 (1) | | | | | | | +--Pelomonas sp. Root1444 (4) | | | | | | | +--Rhodoferax saidenbachensis (1) | | | | | | | +--Limnohabitans sp. 2KL-17 (1) | | | | | | | +--Ramlibacter tataouinensis (1) | | | | | | | +--Hylemonella gracilis ATCC 19624 (1) | | | | | | | +--Pelomonas puraquae (4) | | | | | | | +--Comamonas sp. SP35 (1) | | | | | | | +--Polaromonas naphthalenivorans CJ2 (2) | | | | | | | +--Acidovorax temperans (1) | | | | | | | +--Pseudorhodoferax sp. Leaf274 (1) | | | | | | | +--Pelomonas saccharophila (6) | | | | | | | +--Malikia granosa (1) | | | | | | | +--Ramlibacter sp. Leaf400 (1) | | | | | | | +--Hydrogenophaga sp. H7 (1) | | | | | | | +--Kinneretia asaccharophila (1) | | | | | | | +--Schlegelella thermodepolymerans (1) | | | | | | | +--Rhodoferax koreense (1) | | | | | | | +--Variovorax sp. PBS-H4 (1) | | | | | | | +--Rhodoferax fermentans (1) | | | | | | | +--Limnohabitans sp. T6-5 (1) | | | | | | | +--Curvibacter sp. PAE-UM (1) | | | | | | | +--Polaromonas sp. JS666 (1) | | | | | | | +--Hydrogenophaga sp. IBVHS1 (1) | | | | | | | +--Hydrogenophaga sp. A37 (1) | | | | | | | +--Variovorax sp. PAMC 28711 (1) | | | | | | | +--Comamonadaceae bacterium A1 (1) | | | | | | | +--Ramlibacter sp. BXN5-27 (1) | | | | | | | +--Limnohabitans sp. 63ED37-2 (1) | | | | | | | +--Rhodoferax (1) | | | | | | | +--Rhodoferax antarcticus ANT.BR (1) | | | | | +--Sphaerotilus natans subsp. sulfidovorans (1) | | | | | +--Oxalobacteraceae bacterium IMCC9480 (1) | | | | | +--Inhella inkyongensis (2) | | | | | +--Paucibacter toxinivorans (2) | | | | | +--Roseateles aquatilis (3) | | | | | +--Thiomonas delicata (1) | | | | | +--unclassifiedBurkholderiales (10) | | | | | | | +--BurkholderialesGeneraincertaesedis (10) | | | | | | | +--Mitsuaria sp. 7 (1) | | | | | | | +--Xylophilus sp. Leaf220 (1) | | | | | | | +--Aquabacterium sp. NJ1 (2) | | | | | | | +--Rhizobacter sp. Root1221 (1) | | | | | | | +--Rhizobacter sp. Root404 (1) | | | | | | | +--Rubrivivax (1) | | | | | | | | | +--Rubrivivax gelatinosus IL144 (1) | | | | | | | +--Rhizobacter sp. Root29 (1) | | | | | | | +--Methylibium sp. NZG (1) | | | | | | | +--Paucibacter sp. KCTC 42545 (1) | | | | | +--Oxalobacteraceae (10) | | | | | | | +--Collimonas fungivorans Ter331 (1) | | | | | | | +--Herbaspirillum sp. YR522 (1) | | | | | | | +--Oxalicibacterium solurbis (1) | | | | | | | +--Noviherbaspirillum sp. Root189 (1) | | | | | | | +--Herminiimonas fonticola (1) | | | | | | | +--Oxalicibacterium flavum (1) | | | | | | | +--Undibacterium oligocarboniphilum (1) | | | | | | | +--Herminiimonas arsenicoxydans (1) | | | | | | | +--Herbaspirillum seropedicae SmR1 (1) | | | | | | | +--Herbaspirillum sp. TSA66 (1) | | | | | +--Sphaerotilus hippei (1) | | | | | +--Aquabacterium commune (1) | | | | | +--Oxalobacteraceae bacterium Cr9-30 (1) | | | | | +--Burkholderiaceae (48) | | | | | | | +--Ralstonia sp. 5_2_56FAA (1) | | | | | | | +--Burkholderia xenovorans LB400 (1) | | | | | | | +--Burkholderia sp. TNe-841 (1) | | | | | | | +--Burkholderia sediminicola (1) | | | | | | | +--Paucimonas lemoignei (1) | | | | | | | +--Paraburkholderia ribeironis (1) | | | | | | | +--Candidatus Burkholderia kirkii UZHbot1 (1) | | | | | | | +--Burkholderia graminis C4D1M (1) | | | | | | | +--Burkholderia glathei (1) | | | | | | | +--Burkholderia sp. IMER-B1-49 (1) | | | | | | | +--Cupriavidus sp. ASC-64 (1) | | | | | | | +--Burkholderia sp. LMG 22936 (1) | | | | | | | +--Burkholderia sp. PO-04-17-38 (1) | | | | | | | +--Burkholderia phenazinium (1) | | | | | | | +--Burkholderia phymatum STM815 (1) | | | | | | | +--Burkholderia sp. SRS-W-2-2016 (1) | | | | | | | +--Burkholderia sp. NKMU-JPY345 (1) | | | | | | | +--Burkholderia glumae BGR1 (1) | | | | | | | +--Cupriavidus metallidurans CH34 (1) | | | | | | | +--Burkholderia caryophylli (1) | | | | | | | +--Burkholderia sp. ATSB16 (1) | | | | | | | +--Cupriavidus basilensis (1) | | | | | | | +--Ralstonia solanacearum GMI1000 (1) | | | | | | | +--Paraburkholderia ginsengiterrae (1) | | | | | | | +--Chitinimonas (1) | | | | | | | | | +--Chitinimonas taiwanensis DSM 18899 (1) | | | | | | | +--Ralstonia eutropha H16 (1) | | | | | | | +--Cupriavidus sp. HPC(L) (1) | | | | | | | +--Pandoraea pnomenusa (1) | | | | | | | +--Burkholderia endofungorum (1) | | | | | | | +--Burkholderia sp. OLGA172 (1) | | | | | | | +--Burkholderia sp. J1 (1) | | | | | | | +--Burkholderia sacchari (1) | | | | | | | +--Burkholderia (6) | | | | | | | | | +--Burkholderia pseudomallei K96243 (1) | | | | | | | | | +--Burkholderia singularis (1) | | | | | | | | | +--Burkholderia glumae PG1 (1) | | | | | | | | | +--Burkholderia dolosa AUO158 (1) | | | | | | | | | +--Burkholderia multivorans ATCC 17616 (1) | | | | | | | | | +--Burkholderia seminalis (1) | | | | | | | +--Burkholderia sp. JPY461 (1) | | | | | | | +--Burkholderia soli (1) | | | | | | | +--Burkholderia sp. Leaf177 (1) | | | | | | | +--Cupriavidus sp. USMAA2-4 (1) | | | | | | | +--Burkholderia megapolitana (1) | | | | | | | +--Burkholderia sp. IMER-B1-33 (1) | | | | | | | +--Burkholderia tropica (1) | | | | | | | +--Ralstonia solanacearum IPO1609 (1) | | | | | | | +--Burkholderia sp. lig30 (1) | | | | | | | +--Candidatus Burkholderia verschuerenii (1) | | | | | +--Methylibium petroleiphilum PM1 (1) | | | | | +--Ideonella dechloratans (1) | | | | | +--Methylibium sp. NS21 (1) | | | +--Rhodocyclales (23) | | | | | +--Rhodocyclaceae (23) | | | | | +--Azoarcus sp. BH72 (1) | | | | | +--Thauera (2) | | | | | | | +--Thauera linaloolentis 47Lol = DSM 12138 (1) | | | | | | | +--Thauera terpenica 58Eu (1) | | | | | +--Azoarcus indigens (1) | | | | | +--Dechloromonas denitrificans (1) | | | | | +--Methyloversatilis universalis FAM5 (1) | | | | | +--Aromatoleum aromaticum EbN1 (1) | | | | | +--Azoarcus sp. KH32C (1) | | | | | +--Azoarcus communis (1) | | | | | +--Denitratisoma oestradiolicum (1) | | | | | +--Georgfuchsia toluolica (1) | | | | | +--Thauera sp. 27 (1) | | | | | +--Azospira restricta (1) | | | | | +--Azoarcus tolulyticus (1) | | | | | +--Propionivibrio dicarboxylicus (1) | | | | | +--Methyloversatilis sp. RAC08 (1) | | | | | +--Azonexus hydrophilus (1) | | | | | +--Zoogloea ramigera (1) | | | | | +--Rhodocyclus tenuis (1) | | | | | +--Sulfuritalea (1) | | | | | | | +--Sulfuritalea hydrogenivorans sk43H (1) | | | | | +--Candidatus Propionivibrio aalborgensis (1) | | | | | +--Thauera sp. MZ1T (1) | | | | | +--Azoarcus sp. NSC3 (1) | | | +--Sulfuricellales (1) | | | | | +--Sulfuricellaceae (1) | | | | | +--Sulfuricella (1) | | | | | +--Sulfuricella denitrificans skB26 (1) | | | +--Burkholderiales bacterium JOSHI_001 (1) | | | +--Gallionellales (5) | | | | | +--Gallionellaceae (5) | | | | | +--Sideroxydans lithotrophicus ES-1 (1) | | | | | +--Gallionella capsiferriformans ES-2 (1) | | | | | +--Ferriphaselus amnicola (1) | | | | | +--Candidatus Gallionella acididurans (2) | | | +--Neisseriales (14) | | | | | +--Chromobacteriaceae (4) | | | | | | | +--Vogesella sp. EB (1) | | | | | | | +--Chromobacteriumgroup (1) | | | | | | | | | +--Chromobacterium sp. LK11 (1) | | | | | | | +--Vogesella sp. LIG4 (1) | | | | | | | +--Andreprevotia (1) | | | | | | | +--Andreprevotia lacus DSM 23236 (1) | | | | | +--Neisseriaceae (10) | | | | | +--Formivibrio citricus (1) | | | | | +--Pseudogulbenkiania sp. NH8B (1) | | | | | +--Chromobacterium sp. HT27 (1) | | | | | +--Vitreoscilla filiformis (1) | | | | | +--Crenobacter luteus (1) | | | | | +--Microvirgula aerodenitrificans (1) | | | | | +--Silvimonas terrae (1) | | | | | +--Chromobacterium violaceum ATCC 12472 (1) | | | | | +--Jeongeupia sp. HS-3 (1) | | | | | +--Neisseriaceae bacterium IGB-41 (1) | | | +--[Polyangium] brachysporum (1) | | | +--Nitrosomonadales (17) | | | | | +--Nitrosomonadaceae (17) | | | | | +--Nitrosomonas halophila (2) | | | | | +--Nitrosospira sp. Nsp1 (1) | | | | | +--Nitrosospira multiformis ATCC 25196 (1) | | | | | +--Nitrosomonas sp. Nm58 (1) | | | | | +--Nitrosomonas communis (1) | | | | | +--Nitrosomonas nitrosa (1) | | | | | +--Nitrosospira sp. Nl5 (1) | | | | | +--Nitrosovibrio tenuis (1) | | | | | +--Nitrosomonas (1) | | | | | | | +--Nitrosomonas cryotolerans ATCC 49181 (1) | | | | | +--Nitrosomonas oligotropha (1) | | | | | +--Nitrosovibrio sp. Nv17 (1) | | | | | +--Nitrosomonas sp. Nm51 (1) | | | | | +--Nitrosospira briensis (2) | | | | | +--Nitrosomonas sp. Nm84 (1) | | | | | +--Nitrosomonas europaea ATCC 19718 (1) | | | +--Hydrogenophilales (4) | | | +--Hydrogenophilaceae (4) | | | +--Thiobacillus plumbophilus (1) | | | +--Thiobacillus denitrificans (1) | | | +--Thiobacillus sp. (1) | | | +--Thiobacillus denitrificans ATCC 25259 (1) | +--FCBgroup (1) | | | +--Bacteroidota/Chlorobiotagroup (1) | | | +--Bacteroidota (1) | | | +--Bacteroidia (1) | | | +--Marinilabiliales (1) | | | +--Prolixibacteraceae (1) | | | +--Maribellus luteus (1) | +--Pseudomonadota (224) | +--Gammaproteobacteria (9) | | | +--Acidiferrobacterales (2) | | | | | +--Acidiferrobacteraceae (2) | | | | | +--Acidiferrobacter (1) | | | | | | | +--Acidiferrobacter sp. SPIII_3 (1) | | | | | +--Sulfurifustis variabilis (1) | | | +--Cellvibrionales (1) | | | | | +--Halieaceae (1) | | | | | +--Haliea (1) | | | | | +--Haliea sp. (1) | | | +--Chromatiales (2) | | | | | +--Ectothiorhodospiraceae (1) | | | | | | | +--Thioalkalivibrio (1) | | | | | | | +--Thioalkalivibrio paradoxus ARh 1 (1) | | | | | +--Wenzhouxiangellaceae (1) | | | | | +--Wenzhouxiangella (1) | | | | | +--Wenzhouxiangella sp. XN24 (1) | | | +--Nevskiales (4) | | | +--Nevskiaceae (4) | | | +--Sinimarinibacterium (1) | | | | | +--Sinimarinibacterium sp. CAU 1509 (1) | | | +--Solimonas terrae (1) | | | +--Solimonas marina (2) | +--Betaproteobacteria (214) | | | +--Betaproteobacteria bacterium SCN2 (1) | | | +--Burkholderiales (152) | | | | | +--Burkholderiales bacterium PBB4 (1) | | | | | +--Burkholderialesgeneraincertaesedis (10) | | | | | | | +--Xylophilus rhododendri (1) | | | | | | | +--Aquariibacter albus (1) | | | | | | | +--Rhizobacter (1) | | | | | | | | | +--Rhizobacter sp. AJA081-3 (1) | | | | | | | +--Tepidimonas charontis (1) | | | | | | | +--Aquabacterium (1) | | | | | | | | | +--Aquabacterium sp. (1) | | | | | | | +--Thiomonas (1) | | | | | | | | | +--Thiomonas sp. X19 (1) | | | | | | | +--Tepidimonas alkaliphilus (1) | | | | | | | +--Aquabacterium lacunae (1) | | | | | | | +--Aquabacterium soli (1) | | | | | | | +--Aquabacterium olei (1) | | | | | +--Burkholderiales bacterium PBB5 (1) | | | | | +--Burkholderiales bacterium PBB6 (1) | | | | | +--Oxalobacteraceae (16) | | | | | | | +--Undibacterium rugosum (1) | | | | | | | +--Herbaspirillum (1) | | | | | | | | | +--Herbaspirillum sp. Sphag64 (1) | | | | | | | +--Noviherbaspirillum saxi (1) | | | | | | | +--Noviherbaspirillum pedocola (1) | | | | | | | +--Noviherbaspirillum sedimenti (1) | | | | | | | +--Noviherbaspirillum cavernae (1) | | | | | | | +--Sapientia aquatica (1) | | | | | | | +--Glaciimonas (1) | | | | | | | | | +--Glaciimonas sp. PCH181 (1) | | | | | | | +--Undibacterium piscinae (1) | | | | | | | +--Noviherbaspirillum denitrificans (1) | | | | | | | +--Undibacterium (1) | | | | | | | | | +--Undibacterium sp. KW1 (1) | | | | | | | +--Oxalobacteraceae bacterium OM1 (1) | | | | | | | +--Janthinobacterium (1) | | | | | | | | | +--Janthinobacterium sp. 17J80-10 (1) | | | | | | | +--Noviherbaspirillum humi (1) | | | | | | | +--Solimicrobium silvestre (1) | | | | | | | +--Noviherbaspirillum galbum (1) | | | | | +--Sphaerotilaceae (21) | | | | | | | +--Schlegelella koreensis (1) | | | | | | | +--Inhella crocodyli (2) | | | | | | | +--Rubrivivax albus (1) | | | | | | | +--Ideonella livida (1) | | | | | | | +--Ideonella (1) | | | | | | | | | +--Ideonella sp. MAG2 (1) | | | | | | | +--Caldimonas caldifontis (1) | | | | | | | +--Roseateles (6) | | | | | | | | | +--Roseateles sp. DAIF2 (1) | | | | | | | | | +--Mitsuaria sp. PDC51 (1) | | | | | | | | | +--Paucibacter sp. KBW04 (1) | | | | | | | | | +--Mitsuaria sp. WAJ17 (1) | | | | | | | | | +--Pelomonas sp. HMWF004 (2) | | | | | | | +--Inhella proteolytica (1) | | | | | | | +--Ideonella aquatica (1) | | | | | | | +--Inhella gelatinilytica (1) | | | | | | | +--Piscinibacter (1) | | | | | | | | | +--Piscinibacter sp. HJYY11 (1) | | | | | | | +--Rubrivivax pictus (1) | | | | | | | +--Rubrivivax (1) | | | | | | | | | +--Rubrivivax sp. A210 (1) | | | | | | | +--Scleromatobacter humisilvae (1) | | | | | | | +--Azohydromonas caseinilytica (1) | | | | | +--Burkholderiales bacterium PBB3 (1) | | | | | +--Burkholderiaceae (35) | | | | | | | +--Trinickia terrae (1) | | | | | | | +--Trinickia dinghuensis (1) | | | | | | | +--Paraburkholderia lacunae (1) | | | | | | | +--Ephemeroptericola cinctiostellae (1) | | | | | | | +--Paraburkholderia panacisoli (1) | | | | | | | +--Paraburkholderia dinghuensis (1) | | | | | | | +--Pandoraea terrae (1) | | | | | | | +--Paraburkholderia caffeinitolerans (1) | | | | | | | +--Paraburkholderia eburnea (1) | | | | | | | +--Paraburkholderia acidisoli (1) | | | | | | | +--Hydromonas duriensis (1) | | | | | | | +--Formosimonas limnophila (1) | | | | | | | +--Caballeronia novacaledonica (1) | | | | | | | +--Mycoavidus cysteinexigens (1) | | | | | | | +--Trinickia fusca (1) | | | | | | | +--Burkholderia (1) | | | | | | | | | +--Burkholderia sp. WAC0059 (1) | | | | | | | +--Paraburkholderia monticola (1) | | | | | | | +--Cupriavidus (2) | | | | | | | | | +--Cupriavidus sp. YR651 (1) | | | | | | | | | +--Cupriavidus gilardii J11 (1) | | | | | | | +--Paraburkholderia ultramafica (1) | | | | | | | +--Burkholderiaceae bacterium (1) | | | | | | | +--Cupriavidus agavae (1) | | | | | | | +--Paraburkholderia (4) | | | | | | | | | +--Paraburkholderia sp. LEh10 (1) | | | | | | | | | +--Paraburkholderia sp. BL23I1N1 (1) | | | | | | | | | +--Paraburkholderia sp. BL10I2N1 (1) | | | | | | | | | +--Paraburkholderia sp. DHOC27 (1) | | | | | | | +--Caballeronia (1) | | | | | | | | | +--Caballeronia sp. SBC1 (1) | | | | | | | +--Paraburkholderia fynbosensis (1) | | | | | | | +--Paraburkholderia steynii (1) | | | | | | | +--Paraburkholderia saeva (1) | | | | | | | +--Cupriavidus yeoncheonensis (1) | | | | | | | +--Paraburkholderia tagetis (1) | | | | | | | +--Pararobbsia silviterrae (1) | | | | | | | +--Caballeronia concitans (1) | | | | | | | +--Paraburkholderia acidiphila (1) | | | | | +--Burkholderiales bacterium LSUCC0115 (1) | | | | | +--Comamonadaceae (65) | | | | | +--Oryzisolibacter propanilivorax (1) | | | | | +--Limnohabitans (2) | | | | | | | +--Limnohabitans sp. JirII-31 (1) | | | | | | | +--Limnohabitans sp. Jir61 (1) | | | | | +--Ramlibacter aurantiacus (1) | | | | | +--Variovorax (7) | | | | | | | +--Variovorax sp. PDC80 (1) | | | | | | | +--Variovorax sp. CF079 (1) | | | | | | | +--Variovorax sp. (1) | | | | | | | +--Variovorax sp. Sphag1AA (1) | | | | | | | +--Variovorax sp. OV329 (1) | | | | | | | +--Variovorax sp. MHTC-1 (1) | | | | | | | +--Variovorax sp. PAMC28562 (1) | | | | | +--Paenacidovorax monticola (1) | | | | | +--Hydrogenophaga crocea (1) | | | | | +--Variovorax terrae (1) | | | | | +--Ramlibacter (2) | | | | | | | +--Ramlibacter sp. WS9 (1) | | | | | | | +--Ramlibacter sp. (1) | | | | | +--Comamonadaceae bacterium G21597-S1 (1) | | | | | +--Ramlibacter humi (1) | | | | | +--Ottowia testudinis (1) | | | | | +--Ramlibacter lithotrophicus (1) | | | | | +--Ramlibacter rhizophilus (1) | | | | | +--Ottowia beijingensis (1) | | | | | +--Acidovorax (3) | | | | | | | +--Acidovorax sp. (2) | | | | | | | +--Acidovorax sp. HDW3 (1) | | | | | +--Caenimonas aquaedulcis (1) | | | | | +--Ramlibacter agri (1) | | | | | +--Limnohabitans radicicola (4) | | | | | +--Ramlibacter albus (1) | | | | | +--Comamonas (1) | | | | | | | +--Comamonas sp. BIGb0124 (1) | | | | | +--Ottowia oryzae (1) | | | | | +--Hydrogenophaga (3) | | | | | | | +--Hydrogenophaga taeniospiralis CCUG 15921 (1) | | | | | | | +--Hydrogenophaga sp. BPS33 (1) | | | | | | | +--Hydrogenophaga sp. RAC07 (1) | | | | | +--Ramlibacter pinisoli (1) | | | | | +--Polaromonas (4) | | | | | | | +--Polaromonas sp. (1) | | | | | | | +--Polaromonas sp. Pch-P (1) | | | | | | | +--Polaromonas sp. OV174 (1) | | | | | | | +--Polaromonas sp. A23 (1) | | | | | +--Ottowia (1) | | | | | | | +--Ottowia sp. GY511 (1) | | | | | +--Ramlibacter montanisoli (1) | | | | | +--Ramlibacter monticola (1) | | | | | +--Pulveribacter suum (1) | | | | | +--Simplicispira (1) | | | | | | | +--Simplicispira sp. 125 (1) | | | | | +--Curvibacter (1) | | | | | | | +--Curvibacter sp. AEP1-3 (1) | | | | | +--Tibeticola sediminis (1) | | | | | +--Rhodoferax sediminis (1) | | | | | +--Hydrogenophaga aromaticivorans (1) | | | | | +--Comamonadaceae bacterium (1) | | | | | +--Polaromonas eurypsychrophila (1) | | | | | +--Rhodoferax lacus (1) | | | | | +--Melaminivora alkalimesophila (1) | | | | | +--Hydrogenophaga borbori (1) | | | | | +--Ramlibacter cellulosilyticus (1) | | | | | +--Caenimonas sedimenti (2) | | | | | +--Caenimonas (1) | | | | | | | +--Caenimonas koreensis DSM 17982 (1) | | | | | +--Rhodoferax (3) | | | | | | | +--Rhodoferax sp. OV413 (1) | | | | | | | +--Rhodoferax sp. AJA081-3 (1) | | | | | | | +--Rhodoferax sp. TH121 (1) | | | | | +--Ramlibacter algicola (1) | | | | | +--Albitalea terrae (1) | | | +--Rhodocyclales (21) | | | | | +--Rhodocyclaceae (5) | | | | | | | +--Rhodocyclaceae bacterium (1) | | | | | | | +--Niveibacterium umoris (1) | | | | | | | +--Azospira (1) | | | | | | | | | +--Azospira sp. I13 (1) | | | | | | | +--Oryzomicrobium terrae (1) | | | | | | | +--Azospira inquinata (1) | | | | | +--Azonexaceae (3) | | | | | | | +--Dechloromonas (3) | | | | | | | +--Dechloromonas sp. HYN0024 (1) | | | | | | | +--Dechloromonas sp. TW-R-39-2 (1) | | | | | | | +--Dechloromonas sp. (1) | | | | | +--Zoogloeaceae (13) | | | | | +--Uliginosibacterium (1) | | | | | | | +--Uliginosibacterium sp. TH139 (1) | | | | | +--Pseudothauera nasutitermitis (1) | | | | | +--Pseudothauera lacus (1) | | | | | +--Thauera (2) | | | | | | | +--Thauera aromatica K172 (1) | | | | | | | +--Thauera sp. K11 (1) | | | | | +--Pseudazoarcus pumilus (1) | | | | | +--Pseudothauera rhizosphaerae (1) | | | | | +--Zoogloea dura (1) | | | | | +--Denitromonas iodatirespirans (1) | | | | | +--Parazoarcus (1) | | | | | | | +--Parazoarcus communis SWub3 = DSM 12120 (1) | | | | | +--Thauera propionica (1) | | | | | +--Zoogloea oleivorans (2) | | | +--Ferrovales (1) | | | | | +--Ferrovaceae (1) | | | | | +--Ferrovum (1) | | | | | +--Ferrovum sp. PN-J185 (1) | | | +--Betaproteobacteria bacterium SCN1 (1) | | | +--Neisseriales (12) | | | | | +--Leeiaceae (1) | | | | | | | +--Leeia aquatica (1) | | | | | +--Chromobacteriaceae (4) | | | | | | | +--Paludibacterium purpuratum (1) | | | | | | | +--Aquitalea (1) | | | | | | | | | +--Aquitalea sp. FJL05 (1) | | | | | | | +--Paludibacterium paludis (1) | | | | | | | +--Paludibacterium denitrificans (1) | | | | | +--Chitinibacteraceae (7) | | | | | +--Chitinibacter fontanus (1) | | | | | +--Chitinimonas (1) | | | | | | | +--Chitinimonas sp. BJB300 (1) | | | | | +--Iodobacter ciconiae (1) | | | | | +--Chitinimonas arctica (1) | | | | | +--Chitinilyticum piscinae (1) | | | | | +--Deefgea piscis (1) | | | | | +--Chitiniphilus eburneus (1) | | | +--Nitrosomonadales (25) | | | | | +--Gallionellaceae (4) | | | | | | | +--Gallionellaceae bacterium (1) | | | | | | | +--Sideroxydans (1) | | | | | | | | | +--Sideroxydans sp. CL21 (1) | | | | | | | +--Nitrotoga (1) | | | | | | | | | +--Candidatus Nitrotoga sp. AM1P (1) | | | | | | | +--Candidatus Nitrotoga fabula (1) | | | | | +--Sterolibacteriaceae (3) | | | | | | | +--Sulfuritalea (1) | | | | | | | | | +--Sulfuritalea sp. (1) | | | | | | | +--Denitratisoma (1) | | | | | | | | | +--Denitratisoma sp. DHT3 (1) | | | | | | | +--Sulfurisoma sediminicola (1) | | | | | +--Methylophilaceae (6) | | | | | | | +--Methyloradius palustris (1) | | | | | | | +--Methylophilus medardicus (1) | | | | | | | +--Pseudomethylobacillus aquaticus (1) | | | | | | | +--Methylophilaceae bacterium (1) | | | | | | | +--Methylotenera (1) | | | | | | | | | +--Methylotenera sp. (1) | | | | | | | +--Novimethylophilus kurashikiensis (1) | | | | | +--Nitrosomonadaceae (3) | | | | | | | +--Nitrosomonas (1) | | | | | | | | | +--Nitrosomonas sp. Nm166 (1) | | | | | | | +--Nitrosospira lacus (1) | | | | | | | +--Nitrosospira (1) | | | | | | | +--Nitrosospira sp. Nsp14 (1) | | | | | +--Thiobacillaceae (2) | | | | | | | +--Sulfuritortus calidifontis (1) | | | | | | | +--Parasulfuritortus cantonensis (1) | | | | | +--Usitatibacteraceae (2) | | | | | | | +--Usitatibacter palustris (1) | | | | | | | +--Usitatibacter rugosus (1) | | | | | +--Sulfuricellaceae (5) | | | | | +--Sulfuricella (1) | | | | | | | +--Sulfuricella sp. (1) | | | | | +--Sulfuriferula nivalis (1) | | | | | +--Sulfurimicrobium lacus (1) | | | | | +--Sulfuriferula (1) | | | | | | | +--Sulfuriferula sp. AH1 (1) | | | | | +--Sulfurirhabdus autotrophica (1) | | | +--Betaproteobacteria bacterium (1) | +--Hydrogenophilia (1) | +--Hydrogenophilaliaincertaesedis (1) | +--Pelomicrobium methylotrophicum (1)