# Species tree for RF02835 # Generated from Rfam version 15.00 | +--Eukaryota (3) | | | +--Viridiplantae (3) | | | +--Streptophyta (3) | | | +--Embryophyta (3) | | | +--Tracheophyta (3) | | | +--Spermatophyta (3) | | | +--Magnoliophyta (3) | | | +--Liliopsida (1) | | | | | +--Poales (1) | | | | | +--Poaceae (1) | | | | | +--BEPclade (1) | | | | | +--Ehrhartoideae (1) | | | | | +--Oryzeae (1) | | | | | +--Oryza sativa Indica Group (1) | | | +--eudicotyledons (2) | | | +--Ranunculales (2) | | | +--Papaveraceae (2) | | | +--Papaver nudicaule (2) | +--Bacteria (278) | +--Proteobacteria (137) | | | +--Alphaproteobacteria (1) | | | | | +--Rhodospirillales (1) | | | | | +--Rhodospirillaceae (1) | | | | | +--Magnetospirillum moscoviense (1) | | | +--Gammaproteobacteria (6) | | | | | +--Pseudomonadales (6) | | | | | +--Pseudomonadaceae (6) | | | | | +--Pseudomonas panipatensis (1) | | | | | +--Oblitimonas alkaliphila (1) | | | | | +--Pseudomonas benzenivorans (1) | | | | | +--Pseudomonas aeruginosa PAO1 (1) | | | | | +--Pseudomonas (1) | | | | | | | +--Pseudomonas knackmussii B13 (1) | | | | | +--Pseudomonas jinjuensis (1) | | | +--Betaproteobacteria (130) | | | +--unclassifiedBetaproteobacteria (2) | | | | | +--beta proteobacterium AAP65 (1) | | | | | +--beta proteobacterium AAP99 (1) | | | +--Burkholderiales bacterium JOSHI_001 (1) | | | +--Burkholderiales (119) | | | | | +--Rubrivivax sp. (1) | | | | | +--Leptothrix cholodnii SP-6 (1) | | | | | +--Comamonadaceae bacterium S4 (1) | | | | | +--Leptothrix mobilis (1) | | | | | +--Piscinibacter aquaticus (1) | | | | | +--Comamonadaceae bacterium NML970147 (1) | | | | | +--Comamonadaceae (50) | | | | | | | +--Comamonas terrigena (1) | | | | | | | +--Comamonas denitrificans (1) | | | | | | | +--Ramlibacter tataouinensis TTB310 (1) | | | | | | | +--Acidovorax delafieldii 2AN (1) | | | | | | | +--Delftia acidovorans SPH-1 (1) | | | | | | | +--Acidovorax sp. Leaf160 (1) | | | | | | | +--Acidovorax sp. RAC01 (1) | | | | | | | +--Variovorax sp. JS1663 (1) | | | | | | | +--Pseudacidovorax intermedius (1) | | | | | | | +--Variovorax paradoxus (1) | | | | | | | +--Acidovorax avenae subsp. avenae ATCC 19860 (1) | | | | | | | +--Polaromonas sp. CG9_12 (1) | | | | | | | +--Acidovorax caeni (1) | | | | | | | +--Hydrogenophaga crassostreae (1) | | | | | | | +--Variovorax sp. PBL-E5 (1) | | | | | | | +--Pseudorhodoferax sp. Leaf267 (1) | | | | | | | +--Acidovorax sp. CF316 (1) | | | | | | | +--Comamonas (1) | | | | | | | | | +--Comamonas aquatica DA1877 (1) | | | | | | | +--Giesbergeria anulus (1) | | | | | | | +--Variovorax sp. Root473 (1) | | | | | | | +--Diaphorobacter sp. J5-51 (1) | | | | | | | +--Pelomonas sp. Root1444 (1) | | | | | | | +--Acidovorax sp. MR-S7 (1) | | | | | | | +--Verminephrobacter eiseniae EF01-2 (1) | | | | | | | +--Acidovorax sp. NA3 (1) | | | | | | | +--Ramlibacter tataouinensis (1) | | | | | | | +--Hylemonella gracilis ATCC 19624 (1) | | | | | | | +--Comamonas sp. SP35 (1) | | | | | | | +--Pelomonas puraquae (1) | | | | | | | +--Polaromonas naphthalenivorans CJ2 (1) | | | | | | | +--Acidovorax temperans (1) | | | | | | | +--Acidovorax valerianellae (1) | | | | | | | +--Pseudorhodoferax sp. Leaf274 (1) | | | | | | | +--Pelomonas saccharophila (1) | | | | | | | +--Hydrogenophaga sp. H7 (1) | | | | | | | +--Kinneretia asaccharophila (1) | | | | | | | +--Schlegelella thermodepolymerans (1) | | | | | | | +--Rhodoferax koreense (1) | | | | | | | +--Acidovorax anthurii (1) | | | | | | | +--Variovorax sp. PBS-H4 (1) | | | | | | | +--Curvibacter sp. PAE-UM (1) | | | | | | | +--Simplicispira metamorpha (1) | | | | | | | +--Polaromonas sp. JS666 (1) | | | | | | | +--Hydrogenophaga sp. A37 (1) | | | | | | | +--Variovorax sp. PAMC 28711 (1) | | | | | | | +--Hydrogenophaga sp. IBVHS1 (1) | | | | | | | +--Ramlibacter sp. BXN5-27 (1) | | | | | | | +--Lampropedia (1) | | | | | | | | | +--Lampropedia hyalina DSM 16112 (1) | | | | | | | +--Alicycliphilus denitrificans K601 (1) | | | | | | | +--Limnohabitans sp. B9-3 (1) | | | | | +--Sphaerotilus montanus (1) | | | | | +--Sphaerotilus natans subsp. sulfidovorans (1) | | | | | +--Paucibacter toxinivorans (1) | | | | | +--Roseateles aquatilis (1) | | | | | +--Inhella inkyongensis (1) | | | | | +--Thiomonas delicata (1) | | | | | +--Oxalobacteraceae (5) | | | | | | | +--Massilia sp. WF1 (1) | | | | | | | +--Massilia sp. Root351 (1) | | | | | | | +--Massilia sp. BSC265 (1) | | | | | | | +--Massilia sp. NR 4-1 (1) | | | | | | | +--Duganella sp. Root198D2 (1) | | | | | +--unclassifiedBurkholderiales (10) | | | | | | | +--BurkholderialesGeneraincertaesedis (10) | | | | | | | +--Mitsuaria sp. 7 (1) | | | | | | | +--Ideonella sakaiensis (1) | | | | | | | +--Xylophilus sp. Leaf220 (1) | | | | | | | +--Aquabacterium sp. NJ1 (1) | | | | | | | +--Rhizobacter sp. Root1221 (1) | | | | | | | +--Rhizobacter sp. Root404 (1) | | | | | | | +--Rubrivivax (1) | | | | | | | | | +--Rubrivivax gelatinosus IL144 (1) | | | | | | | +--Rhizobacter sp. Root29 (1) | | | | | | | +--Methylibium sp. NZG (1) | | | | | | | +--Paucibacter sp. KCTC 42545 (1) | | | | | +--Sphaerotilus hippei (1) | | | | | +--Aquabacterium commune (1) | | | | | +--Burkholderiaceae (37) | | | | | | | +--Ralstonia sp. 5_2_56FAA (1) | | | | | | | +--Burkholderia xenovorans LB400 (1) | | | | | | | +--Cupriavidus basilensis (1) | | | | | | | +--Burkholderia sediminicola (1) | | | | | | | +--Burkholderia sp. TNe-841 (1) | | | | | | | +--Ralstonia solanacearum GMI1000 (1) | | | | | | | +--Paraburkholderia ribeironis (1) | | | | | | | +--Candidatus Burkholderia kirkii UZHbot1 (1) | | | | | | | +--Paraburkholderia ginsengiterrae (1) | | | | | | | +--Burkholderia graminis C4D1M (1) | | | | | | | +--Ralstonia eutropha H16 (1) | | | | | | | +--Cupriavidus sp. HPC(L) (1) | | | | | | | +--Burkholderia sp. IMER-B1-49 (1) | | | | | | | +--Burkholderia sp. OLGA172 (1) | | | | | | | +--Cupriavidus sp. ASC-64 (1) | | | | | | | +--Burkholderia sp. LMG 22936 (1) | | | | | | | +--Burkholderia sacchari (1) | | | | | | | +--Burkholderia (6) | | | | | | | | | +--Burkholderia pseudomallei K96243 (1) | | | | | | | | | +--Burkholderia singularis (1) | | | | | | | | | +--Burkholderia multivorans ATCC 17616 (1) | | | | | | | | | +--Burkholderia seminalis (1) | | | | | | | | | +--Burkholderia dolosa AUO158 (1) | | | | | | | | | +--Burkholderia glumae PG1 (1) | | | | | | | +--Burkholderia phymatum STM815 (1) | | | | | | | +--Burkholderia phenazinium (1) | | | | | | | +--Burkholderia sp. JPY461 (1) | | | | | | | +--Burkholderia soli (1) | | | | | | | +--Burkholderia sp. SRS-W-2-2016 (1) | | | | | | | +--Burkholderia sp. NKMU-JPY345 (1) | | | | | | | +--Burkholderia glumae BGR1 (1) | | | | | | | +--Cupriavidus sp. USMAA2-4 (1) | | | | | | | +--Burkholderia megapolitana (1) | | | | | | | +--Cupriavidus metallidurans CH34 (1) | | | | | | | +--Burkholderia sp. IMER-B1-33 (1) | | | | | | | +--Burkholderia tropica (1) | | | | | | | +--Burkholderia sp. lig30 (1) | | | | | | | +--Ralstonia solanacearum IPO1609 (1) | | | | | +--Ideonella dechloratans (1) | | | | | +--Methylibium sp. NS21 (1) | | | | | +--Methylibium petroleiphilum PM1 (1) | | | +--Rhodocyclales (5) | | | | | +--Rhodocyclaceae (5) | | | | | +--Azoarcus tolulyticus (1) | | | | | +--Azoarcus sp. BH72 (1) | | | | | +--Aromatoleum aromaticum EbN1 (1) | | | | | +--Azoarcus indigens (1) | | | | | +--Azoarcus sp. KH32C (1) | | | +--Neisseriales (2) | | | | | +--Neisseriaceae (2) | | | | | +--Vitreoscilla sp. (1) | | | | | +--Vitreoscilla filiformis (1) | | | +--[Polyangium] brachysporum (1) | +--Pseudomonadota (141) | +--Gammaproteobacteria (6) | | | +--Cellvibrionales (1) | | | | | +--Halieaceae (1) | | | | | +--Haliea (1) | | | | | +--Haliea sp. (1) | | | +--Moraxellales (1) | | | | | +--Moraxellaceae (1) | | | | | +--Fluviicoccus keumensis (1) | | | +--Pseudomonadales (4) | | | +--Pseudomonadaceae (4) | | | +--Pseudomonas oryzae (1) | | | +--Pseudomonas (3) | | | +--Pseudomonas sp. GD03985 (1) | | | +--Pseudomonas sp. HAR-UPW-AIA-41 (1) | | | +--Pseudomonas sp. 8AS (1) | +--Betaproteobacteria (135) | +--Burkholderiales (129) | | | +--Burkholderiales bacterium PBB4 (1) | | | +--Burkholderialesgeneraincertaesedis (10) | | | | | +--Aquabacterium (2) | | | | | | | +--Aquabacterium sp. (2) | | | | | +--Thiomonas (1) | | | | | | | +--Thiomonas sp. X19 (1) | | | | | +--Xylophilus rhododendri (1) | | | | | +--Aquabacterium olei (1) | | | | | +--Aquariibacter albus (1) | | | | | +--Aquabacterium lacunae (1) | | | | | +--Rhizobacter (2) | | | | | | | +--Rhizobacter sp. AJA081-3 (1) | | | | | | | +--Rhizobacter sp. (1) | | | | | +--Aquabacterium soli (1) | | | +--Burkholderiales bacterium PBB6 (1) | | | +--Oxalobacteraceae (17) | | | | | +--Noviherbaspirillum denitrificans (1) | | | | | +--Herbaspirillum (1) | | | | | | | +--Herbaspirillum sp. SJZ107 (1) | | | | | +--Telluriagroup (14) | | | | | | | +--Massilia violaceinigra (1) | | | | | | | +--Massilia (2) | | | | | | | | | +--Massilia sp. Root335 (1) | | | | | | | | | +--Massilia sp. (1) | | | | | | | +--Rugamonas brunnea (1) | | | | | | | +--Rugamonas rivuli (1) | | | | | | | +--Massilia eurypsychrophila (1) | | | | | | | +--Massilia horti (1) | | | | | | | +--Massilia cavernae (1) | | | | | | | +--Massilia polaris (1) | | | | | | | +--Duganella fentianensis (1) | | | | | | | +--Massilia forsythiae (1) | | | | | | | +--Massilia psychrophila (1) | | | | | | | +--Duganella (2) | | | | | | | +--Duganella sp. CF517 (1) | | | | | | | +--Duganella sp. 1224 (1) | | | | | +--Noviherbaspirillum humi (1) | | | +--Sphaerotilaceae (18) | | | | | +--Schlegelella koreensis (1) | | | | | +--Inhella crocodyli (1) | | | | | +--Rubrivivax albus (1) | | | | | +--Ideonella (1) | | | | | | | +--Ideonella sp. MAG2 (1) | | | | | +--Ideonella livida (1) | | | | | +--Inhella proteolytica (1) | | | | | +--Caldimonas caldifontis (1) | | | | | +--Roseateles (4) | | | | | | | +--Roseateles sp. DAIF2 (1) | | | | | | | +--Paucibacter sp. KBW04 (1) | | | | | | | +--Pelomonas sp. HMWF004 (1) | | | | | | | +--Mitsuaria sp. WAJ17 (1) | | | | | +--Ideonella aquatica (1) | | | | | +--Inhella gelatinilytica (1) | | | | | +--Piscinibacter (1) | | | | | | | +--Piscinibacter sp. HJYY11 (1) | | | | | +--Rubrivivax pictus (1) | | | | | +--Rubrivivax (1) | | | | | | | +--Rubrivivax sp. A210 (1) | | | | | +--Azohydromonas caseinilytica (1) | | | | | +--Scleromatobacter humisilvae (1) | | | +--Burkholderiales bacterium PBB3 (1) | | | +--Burkholderiaceae (29) | | | | | +--Trinickia terrae (1) | | | | | +--Trinickia dinghuensis (1) | | | | | +--Paraburkholderia lacunae (1) | | | | | +--Paraburkholderia panacisoli (1) | | | | | +--Paraburkholderia dinghuensis (1) | | | | | +--Paraburkholderia caffeinitolerans (1) | | | | | +--Paraburkholderia eburnea (2) | | | | | +--Paraburkholderia acidisoli (1) | | | | | +--Caballeronia novacaledonica (1) | | | | | +--Burkholderia (1) | | | | | | | +--Burkholderia sp. WAC0059 (1) | | | | | +--Trinickia fusca (1) | | | | | +--Paraburkholderia monticola (1) | | | | | +--Paraburkholderia ultramafica (1) | | | | | +--Cupriavidus (2) | | | | | | | +--Cupriavidus sp. YR651 (1) | | | | | | | +--Cupriavidus gilardii J11 (1) | | | | | +--Burkholderiaceae bacterium (1) | | | | | +--Cupriavidus agavae (1) | | | | | +--Paraburkholderia (4) | | | | | | | +--Paraburkholderia sp. LEh10 (1) | | | | | | | +--Paraburkholderia sp. BL23I1N1 (1) | | | | | | | +--Paraburkholderia sp. BL10I2N1 (1) | | | | | | | +--Paraburkholderia sp. DHOC27 (1) | | | | | +--Caballeronia (1) | | | | | | | +--Caballeronia sp. SBC1 (1) | | | | | +--Paraburkholderia fynbosensis (1) | | | | | +--Paraburkholderia saeva (1) | | | | | +--Paraburkholderia steynii (1) | | | | | +--Cupriavidus yeoncheonensis (1) | | | | | +--Paraburkholderia tagetis (1) | | | | | +--Paraburkholderia acidiphila (1) | | | +--Comamonadaceae (52) | | | +--Oryzisolibacter propanilivorax (1) | | | +--Limnohabitans (1) | | | | | +--Limnohabitans sp. JirII-31 (1) | | | +--Ramlibacter aurantiacus (1) | | | +--Variovorax (7) | | | | | +--Variovorax sp. PDC80 (1) | | | | | +--Variovorax sp. CF079 (1) | | | | | +--Variovorax sp. (1) | | | | | +--Variovorax sp. Sphag1AA (1) | | | | | +--Variovorax sp. OV329 (1) | | | | | +--Variovorax sp. MHTC-1 (1) | | | | | +--Variovorax sp. PAMC28562 (1) | | | +--Paenacidovorax monticola (1) | | | +--Variovorax terrae (1) | | | +--Ramlibacter (2) | | | | | +--Ramlibacter sp. WS9 (1) | | | | | +--Ramlibacter sp. (1) | | | +--Comamonadaceae bacterium G21597-S1 (1) | | | +--Ottowia testudinis (1) | | | +--Ramlibacter humi (1) | | | +--Comamonas suwonensis (1) | | | +--Ottowia beijingensis (1) | | | +--Diaphorobacter (1) | | | | | +--Diaphorobacter sp. HDW4B (1) | | | +--Acidovorax (1) | | | | | +--Acidovorax sp. HDW3 (1) | | | +--Caenimonas aquaedulcis (1) | | | +--Corticibacter populi (1) | | | +--Ramlibacter agri (1) | | | +--Ramlibacter albus (1) | | | +--Comamonas (2) | | | | | +--Comamonas sp. 26 (1) | | | | | +--Comamonas sp. JNW (1) | | | +--Ottowia oryzae (1) | | | +--Hydrogenophaga (4) | | | | | +--Hydrogenophaga taeniospiralis CCUG 15921 (1) | | | | | +--Hydrogenophaga sp. IBVHS2 (1) | | | | | +--Hydrogenophaga sp. RAC07 (1) | | | | | +--Hydrogenophaga sp. BPS33 (1) | | | +--Polaromonas (3) | | | | | +--Polaromonas sp. Pch-P (1) | | | | | +--Polaromonas sp. OV174 (1) | | | | | +--Polaromonas sp. A23 (1) | | | +--Ottowia (1) | | | | | +--Ottowia sp. GY511 (1) | | | +--Ramlibacter monticola (1) | | | +--Pulveribacter suum (1) | | | +--Simplicispira (1) | | | | | +--Simplicispira sp. 125 (1) | | | +--Hydrogenophaga aromaticivorans (1) | | | +--Comamonadaceae bacterium (1) | | | +--Diaphorobacter ruginosibacter (1) | | | +--Hydrogenophaga borbori (1) | | | +--Ramlibacter cellulosilyticus (1) | | | +--Diaphorobacter aerolatus (1) | | | +--Caenimonas sedimenti (1) | | | +--Comamonas antarctica (1) | | | +--Rhodoferax (2) | | | | | +--Rhodoferax sp. OV413 (1) | | | | | +--Rhodoferax sp. AJA081-3 (1) | | | +--Caenimonas (1) | | | | | +--Caenimonas koreensis DSM 17982 (1) | | | +--Albitalea terrae (1) | | | +--Ramlibacter algicola (1) | +--Rhodocyclales (6) | +--Zoogloeaceae (6) | +--Pseudothauera nasutitermitis (1) | +--Thauera (2) | | | +--Thauera aromatica K172 (1) | | | +--Thauera sp. K11 (1) | +--Pseudothauera lacus (1) | +--Pseudothauera rhizosphaerae (1) | +--Denitromonas iodatirespirans (1)