# Species tree for RF02784 # Generated from Rfam version 15.00 | +--Eukaryota (1) | | | +--Rhizaria (1) | | | +--Foraminifera (1) | | | +--Reticulomyxidae (1) | | | +--Reticulomyxa filosa (1) | +--Bacteria (532) | | | +--Proteobacteria (298) | | | | | +--Alphaproteobacteria (287) | | | | | | | +--Rhodobacterales bacterium Y4I (2) | | | | | | | +--Rhodobacterales (285) | | | | | | | +--Rhodobacteraceae bacterium SH6-1 (2) | | | | | | | +--Rhodobacteraceae bacterium KLH11 (2) | | | | | | | +--Rhodobacteraceae bacterium ISL-46 (1) | | | | | | | +--Rhodobacteraceae bacterium HTCC2083 (1) | | | | | | | +--Rhodobacteraceae bacterium KAUST-100406-0324 (2) | | | | | | | +--Rhodobacteraceae (273) | | | | | | | | | +--Pararhodobacter aggregans (1) | | | | | | | | | +--Jannaschia helgolandensis (2) | | | | | | | | | +--Ponticoccus sp. SJ5A-1 (2) | | | | | | | | | +--Thalassobius sp. CECT 5114 (1) | | | | | | | | | +--Ruegeria sp. TM1040 (2) | | | | | | | | | +--Thiobacimonas profunda (2) | | | | | | | | | +--Thalassobacter sp. 16PALIMAR09 (2) | | | | | | | | | +--Tropicibacter (2) | | | | | | | | | | | +--Tropicibacter litoreus R37 (2) | | | | | | | | | +--Oceanicola batsensis HTCC2597 (2) | | | | | | | | | +--Puniceibacterium sp. IMCC21224 (1) | | | | | | | | | +--Marivita geojedonensis (1) | | | | | | | | | +--Sagittula stellata E-37 (4) | | | | | | | | | +--Rhodovulum thermophilus (1) | | | | | | | | | +--Loktanella marina (1) | | | | | | | | | +--Rubellimicrobium sp. MSL 20 (2) | | | | | | | | | +--Roseovarius pacificus (2) | | | | | | | | | +--Ruegeria sp. CC-GIMAT-2 (2) | | | | | | | | | +--Roseivivax atlanticus (2) | | | | | | | | | +--Maritimibacter alkaliphilus HTCC2654 (2) | | | | | | | | | +--Ruegeria sp. ANG-S4 (2) | | | | | | | | | +--Actibacterium (1) | | | | | | | | | | | +--Actibacterium mucosum KCTC 23349 (1) | | | | | | | | | +--Jannaschia rubra (2) | | | | | | | | | +--Boseongicola aestuarii (2) | | | | | | | | | +--Gemmobacter aquatilis (1) | | | | | | | | | +--Paracoccus sp. sw-3 (1) | | | | | | | | | +--Paracoccus sp. J6 (1) | | | | | | | | | +--Catellibacterium aquatile (1) | | | | | | | | | +--Antarctobacter sp. JLT354-W (2) | | | | | | | | | +--Citreimonas salinaria (2) | | | | | | | | | +--Sulfitobacter marinus (2) | | | | | | | | | +--Roseivivax (3) | | | | | | | | | | | +--Roseivivax isoporae LMG 25204 (2) | | | | | | | | | | | +--Roseivivax halodurans JCM 10272 (1) | | | | | | | | | +--Loktanella sp. S4079 (2) | | | | | | | | | +--Rhodobacteraceae bacterium PD-2 (2) | | | | | | | | | +--Paracoccus sp. Tibet-S9a3 (1) | | | | | | | | | +--Rhodobacter sp. SW2 (2) | | | | | | | | | +--Paracoccus denitrificans PD1222 (1) | | | | | | | | | +--Defluviimonas denitrificans (1) | | | | | | | | | +--Pelagicola litorisediminis (2) | | | | | | | | | +--Octadecabacter temperatus (1) | | | | | | | | | +--Maritimibacter sp. HL-12 (2) | | | | | | | | | +--Maribius salinus (1) | | | | | | | | | +--Paracoccus sp. Zy-3 (1) | | | | | | | | | +--Actibacterium atlanticum (1) | | | | | | | | | +--Thalassococcus halodurans (1) | | | | | | | | | +--Loktanella koreensis (2) | | | | | | | | | +--Roseobacter denitrificans OCh 114 (2) | | | | | | | | | +--Citreicella sp. CK-I3-6 (2) | | | | | | | | | +--Paracoccus sp. SM22M-07 (1) | | | | | | | | | +--Roseovarius aestuarii (2) | | | | | | | | | +--Pelagibaca bermudensis HTCC2601 (2) | | | | | | | | | +--Halocynthiibacter arcticus (1) | | | | | | | | | +--Palleronia marisminoris (1) | | | | | | | | | +--Albidovulum inexpectatum (1) | | | | | | | | | +--Oceanibulbus sp. HI0023 (2) | | | | | | | | | +--Pelagibaca abyssi (2) | | | | | | | | | +--Thalassobius mediterraneus (2) | | | | | | | | | +--Jannaschia sp. CCS1 (1) | | | | | | | | | +--Roseivivax jejudonensis (2) | | | | | | | | | +--Roseovarius nubinhibens ISM (1) | | | | | | | | | +--Loktanella vestfoldensis SKA53 (2) | | | | | | | | | +--Roseovarius halotolerans (2) | | | | | | | | | +--Jannaschia donghaensis (1) | | | | | | | | | +--Sulfitobacter (2) | | | | | | | | | | | +--Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565 (2) | | | | | | | | | +--Albidovulum sp. YBY-7 (1) | | | | | | | | | +--Sulfitobacter noctilucicola (2) | | | | | | | | | +--Roseovarius sp. NH52J (1) | | | | | | | | | +--Pseudooceanicola flagellatus (1) | | | | | | | | | +--Paracoccus thiocyanatus (1) | | | | | | | | | +--Pseudooctadecabacter jejudonensis (2) | | | | | | | | | +--Oceanicola sp. JLT1210 (2) | | | | | | | | | +--Pseudopelagicola gijangensis (1) | | | | | | | | | +--Pseudorhodobacter sp. ZS3-33 (1) | | | | | | | | | +--Roseobacter sp. SK209-2-6 (2) | | | | | | | | | +--Rhodobacter sp. ZS2-28 (1) | | | | | | | | | +--Shimia sp. SK013 (1) | | | | | | | | | +--Octadecabacter antarcticus 238 (2) | | | | | | | | | +--Pseudoruegeria sp. HD-43 (1) | | | | | | | | | +--Roseovarius tolerans (2) | | | | | | | | | +--Phaeobacter sp. CECT 5382 (2) | | | | | | | | | +--Rhodovulum adriaticum (1) | | | | | | | | | +--Loktanella salsilacus (2) | | | | | | | | | +--Tropicibacter naphthalenivorans (1) | | | | | | | | | +--Tropicimonas sp. M97 (1) | | | | | | | | | +--Aestuariivita atlantica (1) | | | | | | | | | +--Marinovum algicola (1) | | | | | | | | | +--Rhodobacter sp. EL-50 (1) | | | | | | | | | +--Catellibacterium sp. Orc-4 (1) | | | | | | | | | +--Methylarcula marina (1) | | | | | | | | | +--Paracoccus yeei (1) | | | | | | | | | +--Loktanella (1) | | | | | | | | | | | +--Loktanella hongkongensis DSM 17492 (1) | | | | | | | | | +--Paracoccus seriniphilus (1) | | | | | | | | | +--Paracoccus sp. 228 (1) | | | | | | | | | +--Ruegeria sp. ZGT118 (2) | | | | | | | | | +--Salipiger (2) | | | | | | | | | | | +--Salipiger mucosus DSM 16094 (2) | | | | | | | | | +--Rhodobacteraceae bacterium EhC02 (2) | | | | | | | | | +--Marinosulfonomonas sp. PRT-SC04 (1) | | | | | | | | | +--Pseudoruegeria aquimaris (1) | | | | | | | | | +--Rubrimonas cliftonensis (1) | | | | | | | | | +--Sulfitobacter mediterraneus (2) | | | | | | | | | +--Antarctobacter heliothermus (2) | | | | | | | | | +--Phaeobacter gallaeciensis (2) | | | | | | | | | +--Jannaschia seohaensis (2) | | | | | | | | | +--Oceanicella actignis (1) | | | | | | | | | +--Litoreibacter (2) | | | | | | | | | | | +--Litoreibacter arenae DSM 19593 (2) | | | | | | | | | +--Citreicella sp. ADB (2) | | | | | | | | | +--Thalassobius sp. GSW-6 (1) | | | | | | | | | +--Rhodobaca barguzinensis (1) | | | | | | | | | +--Rubellimicrobium (1) | | | | | | | | | | | +--Rubellimicrobium thermophilum DSM 16684 (1) | | | | | | | | | +--Phaeobacter sp. G4 (2) | | | | | | | | | +--Phaeobacter sp. CECT 7735 (2) | | | | | | | | | +--Paracoccus halophilus (1) | | | | | | | | | +--Candidatus Rhodobacter lobularis (2) | | | | | | | | | +--Citreicella thiooxidans (2) | | | | | | | | | +--Jannaschia seosinensis (2) | | | | | | | | | +--Paracoccus aestuarii (1) | | | | | | | | | +--Marivita sp. DPG-28 (1) | | | | | | | | | +--Roseivivax sp. YIM D21 (2) | | | | | | | | | +--Roseovarius sp. B108 (2) | | | | | | | | | +--Rubellimicrobium roseum (2) | | | | | | | | | +--Jannaschia pohangensis (2) | | | | | | | | | +--Ruegeria sp. ANG-R (2) | | | | | | | | | +--Paracoccus homiensis (1) | | | | | | | | | +--Pelagicola litoralis (2) | | | | | | | | | +--Roseovarius azorensis (2) | | | | | | | | | +--Thalassobius gelatinovorus (2) | | | | | | | | | +--Loktanella fryxellensis (1) | | | | | | | | | +--Rhodobacter sphaeroides 2.4.1 (1) | | | | | | | | | +--Loktanella rosea (2) | | | | | | | | | +--Sulfitobacter pontiacus (2) | | | | | | | | | +--Roseivivax halotolerans (2) | | | | | | | | | +--Oceanicola litoreus (1) | | | | | | | | | +--Paracoccus sp. J56 (1) | | | | | | | | | +--Jannaschia sp. GSW-M26 (2) | | | | | | | | | +--Loktanella atrilutea (1) | | | | | | | | | +--Donghicola sp. KarMa (2) | | | | | | | | | +--Catellibacterium sp. CF17 (1) | | | | | | | | | +--Sulfitobacter guttiformis (2) | | | | | | | | | +--Thalassiobium sp. R2A62 (2) | | | | | | | | | +--Lutimaribacter saemankumensis (2) | | | | | | | | | +--Tateyamaria sp. ANG-S1 (3) | | | | | | | | | +--Maribius sp. Y26 (1) | | | | | | | | | +--Confluentimicrobium lipolyticum (1) | | | | | | | | | +--Ruegeria sp. ZH17 (1) | | | | | | | | | +--Maliponia aquimaris (2) | | | | | | | | | +--Rhodobacter ovatus (1) | | | | | | | | | +--Paracoccus alcaliphilus (1) | | | | | | | | | +--Oceanicola nanhaiensis (1) | | | | | | | | | +--Loktanella tamlensis (2) | | | | | | | | | +--Thalassobius aestuarii (1) | | | | | | | | | +--Yangia sp. CCB-MM3 (2) | | | | | | | | | +--Haematobacter massiliensis (1) | | | | | | | | | +--Sulfitobacter pseudonitzschiae (2) | | | | | | | | | +--Nautella italica (1) | | | | | | | | | +--Paracoccus aminovorans (1) | | | | | | | | | +--Donghicola xiamenensis (1) | | | | | | | | | +--Paracoccus (1) | | | | | | | | | | | +--Paracoccus aminophilus JCM 7686 (1) | | | | | | | | | +--Dinoroseobacter shibae DFL 12 (1) | | | | | | | | | +--Pseudooceanicola atlanticus (2) | | | | | | | | | +--Oceanicola granulosus HTCC2516 (1) | | | | | | | | | +--Oceaniovalibus (1) | | | | | | | | | | | +--Oceaniovalibus guishaninsula JLT2003 (1) | | | | | | | | | +--Paracoccus sp. NB88 (1) | | | | | | | | | +--Rhodobacteraceae bacterium O3.65 (2) | | | | | | | | | +--Oceanicola marinus (2) | | | | | | | | | +--Xuhuaishuia manganoxidans (1) | | | | | | | | | +--Roseivivax sp. BH87090 (2) | | | | | | | | | +--Rhodobacteraceae bacterium HIMB11 (1) | | | | | | | | | +--Wenxinia (1) | | | | | | | | | | | +--Wenxinia marina DSM 24838 (1) | | | | | | | | | +--Catellibacterium sp. Ruye-53 (3) | | | | | | | | | +--Sulfitobacter brevis (1) | | | | | | | | | +--Ruegeria pomeroyi DSS-3 (2) | | | | | | | | | +--Roseovarius mucosus (2) | | | | | | | | | +--Loktanella sediminum (2) | | | | | | | | | +--Rhodobacter sp. CACIA14H1 (1) | | | | | | | | | +--Tropicibacter sp. CECT 7557 (2) | | | | | | | | | +--Sedimentitalea nanhaiensis (1) | | | | | | | | | +--Primorskyibacter sedentarius (2) | | | | | | | | | +--Roseovarius crassostreae (2) | | | | | | | +--Rhodobacteraceae bacterium SH4-1 (1) | | | | | | | +--Shimia marina (2) | | | | | | | +--Rhodobacteraceae bacterium HTCC2150 (1) | | | | | +--alpha proteobacterium GRP21 (2) | | | | | +--alpha proteobacterium KMM 9010 (2) | | | | | +--alpha proteobacterium A34 (2) | | | | | +--alpha proteobacterium KMM 9023 (1) | | | | | +--alpha proteobacterium F028-2 (2) | | | | | +--alpha proteobacterium ZXM100 (2) | | | +--Pseudomonadota (234) | | | +--Alphaproteobacteria (234) | | | +--Hyphomicrobiales (2) | | | | | +--Stappiaceae (2) | | | | | +--Roseibium (2) | | | | | +--Roseibium sp. RKSG952 (2) | | | +--Rhodospirillales (2) | | | | | +--Zavarziniaceae (1) | | | | | | | +--Zavarzinia compransoris (1) | | | | | +--Rhodospirillaceae (1) | | | | | +--Candidatus Defluviicoccus seviourii (1) | | | +--Rhodobacterales (230) | | | +--Roseobacteraceae (97) | | | | | +--Sulfitobacter albidus (2) | | | | | +--Roseobacter ponti (2) | | | | | +--Roseobacter insulae (2) | | | | | +--Sulfitobacter undariae (2) | | | | | +--Actibacterium pelagium (1) | | | | | +--Thalassovita litoralis (2) | | | | | +--Roseovarius gaetbuli (1) | | | | | +--Thalassococcus profundi (1) | | | | | +--Roseovarius bejariae (2) | | | | | +--Phaeobacter (1) | | | | | | | +--Phaeobacter sp. 22II1-1F12B (1) | | | | | +--Palleronia caenipelagi (1) | | | | | +--Roseovarius (4) | | | | | | | +--Roseovarius sp. THAF27 (1) | | | | | | | +--Roseovarius sp. TE539 (2) | | | | | | | +--Roseovarius sp. A46 (1) | | | | | +--Salipiger pallidus (1) | | | | | +--Oceanicola (1) | | | | | | | +--Oceanicola sp. 22II-s10i (1) | | | | | +--Tropicimonas (2) | | | | | | | +--Tropicimonas sp. IMCC6043 (2) | | | | | +--Seohaeicola zhoushanensis (2) | | | | | +--Palleronia pontilimi (1) | | | | | +--Sulfitobacter (9) | | | | | | | +--Sulfitobacter sp. THAF37 (2) | | | | | | | +--Sulfitobacter sp. SK012 (2) | | | | | | | +--Sulfitobacter sp. SK011 (2) | | | | | | | +--Sulfitobacter sp. JL08 (1) | | | | | | | +--Sulfitobacter sp. D7 (2) | | | | | +--Palleronia abyssalis (1) | | | | | +--Sulfitobacter sediminilitoris (2) | | | | | +--Rubellimicrobium (1) | | | | | | | +--Rubellimicrobium sp. CFH 75288 (1) | | | | | +--Thalassobius vesicularis (2) | | | | | +--Sulfitobacter aestuariivivens (2) | | | | | +--Maritimibacter harenae (2) | | | | | +--Citreicella (1) | | | | | | | +--Citreicella sp. C3M06 (1) | | | | | +--Sagittula salina (2) | | | | | +--Donghicola tyrosinivorans (2) | | | | | +--Pelagimonas phthalicica (2) | | | | | +--Ruegeria arenilitoris (2) | | | | | +--Shimia abyssi (1) | | | | | +--Palleronia sediminis (1) | | | | | +--Epibacterium ulvae (2) | | | | | +--Roseovarius spongiae (2) | | | | | +--Pontibaca salina (2) | | | | | +--Oceaniovalibus (2) | | | | | | | +--Oceaniovalibus sp. ACAM 378 (2) | | | | | +--Roseobacter cerasinus (2) | | | | | +--Thetidibacter halocola (2) | | | | | +--Roseivivax (2) | | | | | | | +--Roseivivax sp. THAF197b (2) | | | | | +--Mesobaculum littorinae (2) | | | | | +--Rubellimicrobium rubrum (1) | | | | | +--Roseovarius faecimaris (1) | | | | | +--Sulfitobacter sabulilitoris (2) | | | | | +--Maritimibacter fusiformis (2) | | | | | +--Litoreibacter roseus (2) | | | | | +--Loktanella (1) | | | | | | | +--Loktanella sp. IMCC34160 (1) | | | | | +--Actibacterium naphthalenivorans (1) | | | | | +--Litoreibacter ponti (2) | | | | | +--Roseovarius litoreus (2) | | | | | +--Salibaculum griseiflavum (2) | | | | | +--Aliiruegeria haliotis (1) | | | | | +--Thalassococcus (3) | | | | | | | +--Thalassococcus sp. S3 (3) | | | | | +--Octadecabacter (1) | | | | | | | +--Octadecabacter sp. SW4 (1) | | | | | +--Roseovarius gahaiensis (2) | | | +--Paracoccaceae (133) | | | +--Halovulum dunhuangense (2) | | | +--Rhodobacteraceae bacterium 63075 (2) | | | +--Yoonia litorea (2) | | | +--Ascidiaceihabitans donghaensis (1) | | | +--Aliiroseovarius sediminilitoris (2) | | | +--Rhodobacter (5) | | | | | +--Rhodobacter sp. SGA-6-6 (2) | | | | | +--Rhodobacter sp. 24-YEA-8 (3) | | | +--Neotabrizicola shimadae (1) | | | +--Rhodobacteraceae bacterium PARR1 (1) | | | +--Paracoccus liaowanqingii (1) | | | +--Paracoccus lutimaris (1) | | | +--Pontibrevibacter nitratireducens (1) | | | +--Tritonibacter litoralis (1) | | | +--Pseudooceanicola algae (2) | | | +--Tabrizicola (1) | | | | | +--Tabrizicola sp. TH137 (1) | | | +--Paenihalocynthiibacter styelae (2) | | | +--Pseudorhodobacter turbinis (2) | | | +--Rhodosalinus sediminis (1) | | | +--Qingshengfaniella alkalisoli (1) | | | +--Algicella marina (2) | | | +--Fuscibacter oryzae (2) | | | +--Litorivita pollutaquae (1) | | | +--Tabrizicola piscis (1) | | | +--Aliiroseovarius pelagivivens (1) | | | +--Fuscovulum (1) | | | | | +--Fuscovulum blasticum DSM 2131 (1) | | | +--Pararhodobacter oceanensis (1) | | | +--Pseudoprimorskyibacter insulae (2) | | | +--Paracoccus aurantiacus (1) | | | +--Halovulum marinum (2) | | | +--Histidinibacterium lentulum (1) | | | +--Rhodobacteraceae bacterium WD3A24 (1) | | | +--Allosediminivita pacifica (1) | | | +--Pseudogemmobacter humi (1) | | | +--Tabrizicola oligotrophica (2) | | | +--Rhodosalinus halophilus (1) | | | +--Antarcticimicrobium sediminis (1) | | | +--Kangsaoukella pontilimi (2) | | | +--Fertoeibacter niger (1) | | | +--Frigidibacter albus (1) | | | +--Paracoccus tegillarcae (1) | | | +--Rhodobaculum claviforme (1) | | | +--Pontivivens insulae (1) | | | +--Meridianimarinicoccus roseus (2) | | | +--Aliishimia ponticola (2) | | | +--Albimonas pacifica (1) | | | +--Rhabdonatronobacter sediminivivens (1) | | | +--Tritonibacter aquimaris (1) | | | +--Gemmobacter lutimaris (1) | | | +--Marinibacterium profundimaris (2) | | | +--Rubricella aquisinus (1) | | | +--Pseudooceanicola albus (2) | | | +--Rhodobacteraceae bacterium THAF1 (1) | | | +--Marivivensgroup (2) | | | | | +--Marivivens niveibacter (1) | | | | | +--Marivivens (1) | | | | | +--Marivivens sp. JLT3646 (1) | | | +--Zongyanglinia huanghaiensis (2) | | | +--Pukyongiella litopenaei (2) | | | +--Pseudooceanicola pacificus (2) | | | +--Pelagivirga sediminicola (1) | | | +--Rhodobacteraceae bacterium F11138 (2) | | | +--Rhodobacteraceae bacterium R_SAG7 (1) | | | +--Gemmobacter fulvus (1) | | | +--Pararhodobacter marinus (1) | | | +--Pseudoroseicyclus tamaricis (1) | | | +--Defluviimonas aquaemixtae (1) | | | +--Pseudorhodobacter (7) | | | | | +--Pseudorhodobacter sp. PARRP1 (2) | | | | | +--Pseudorhodobacter sp. (2) | | | | | +--Pseudorhodobacter sp. MZDSW-24AT (2) | | | | | +--Pseudorhodobacter sp. E13 (1) | | | +--Arenibacterium arenosum (2) | | | +--Thalassorhabdomicrobium marinisediminis (2) | | | +--Paracoccus (3) | | | | | +--Paracoccus sp. R12_2 (1) | | | | | +--Paracoccus sp. S-4012 (1) | | | | | +--Paracoccus sp. S1E-3 (1) | | | +--Profundibacter amoris (1) | | | +--Yoonia sediminilitoris (2) | | | +--Paracoccus jeotgali (1) | | | +--Gemmobacter aquarius (1) | | | +--Mangrovicoccus algicola (1) | | | +--Pseudooceanicola spongiae (2) | | | +--Paracoccus subflavus (1) | | | +--Paracoccus shanxieyensis (1) | | | +--Szabonella alba (1) | | | +--Rhodovulum (1) | | | | | +--Rhodovulum sp. 12E13 (1) | | | +--Cereibacter (1) | | | | | +--Cereibacter changlensis JA139 (1) | | | +--Pseudooceanicola lipolyticus (2) | | | +--Cribrihabitans marinus (2) | | | +--Pelagovum pacificum (1) | | | +--Paracoccus onubensis (1) | | | +--Yoonia ponticola (2) | | | +--Paracoccus suum (1) | | | +--Gemmobacter aestuarii (1) | | | +--Puniceibacterium antarcticum (1) | | | +--Rhodobacteraceae bacterium AsT-22 (2) | | | +--Puniceibacterium sediminis (1) | | | +--Paracoccus aestuariivivens (1) | | | +--Silicimonas algicola (2) | | | +--Rhodobacteraceae bacterium CCMM004 (1) | +--bacterium KME 002 (1)