# Species tree for RF02553 # Generated from Rfam version 15.00 | +--Eukaryota (3) | | | +--Metazoa (2) | | | | | +--Chordata (2) | | | | | +--Craniata (2) | | | | | +--Vertebrata (2) | | | | | +--Euteleostomi (2) | | | | | +--Archosauria (2) | | | | | +--Dinosauria (2) | | | | | +--Saurischia (2) | | | | | +--Theropoda (2) | | | | | +--Coelurosauria (2) | | | | | +--Aves (2) | | | | | +--Neognathae (2) | | | | | +--Passeriformes (2) | | | | | +--Timaliidae (2) | | | | | +--Pteruthius melanotis (2) | | | +--Viridiplantae (1) | | | +--Streptophyta (1) | | | +--Embryophyta (1) | | | +--Tracheophyta (1) | | | +--Spermatophyta (1) | | | +--Magnoliophyta (1) | | | +--Liliopsida (1) | | | +--Poales (1) | | | +--Poaceae (1) | | | +--BEPclade (1) | | | +--Ehrhartoideae (1) | | | +--Oryzeae (1) | | | +--Oryza sativa Indica Group (1) | +--Bacteria (122) | +--Acidobacteriota (1) | | | +--Blastocatellia (1) | | | +--Blastocatellales (1) | | | +--Pyrinomonadaceae (1) | | | +--Pyrinomonadaceae bacterium (1) | +--Bacteroidetes (2) | | | +--BacteroidetesOrderII.Incertaesedis (2) | | | +--Rhodothermaceae (2) | | | +--Rubricoccus marinus (2) | +--Proteobacteria (53) | | | +--Alphaproteobacteria (19) | | | | | +--Rhizobiales (4) | | | | | | | +--Cohaesibacter gelatinilyticus (1) | | | | | | | +--Xanthobacteraceae (1) | | | | | | | | | +--Labrys okinawensis (1) | | | | | | | +--Rhizobiaceae (2) | | | | | | | +--Rhizobium/Agrobacteriumgroup (2) | | | | | | | +--Pararhizobium polonicum (1) | | | | | | | +--Rhizobium phaseoli (1) | | | | | +--Sphingomonadales (5) | | | | | | | +--Sphingomonadaceae (5) | | | | | | | +--Novosphingobium sp. Rr 2-17 (2) | | | | | | | +--Sphingomonas sp. Leaf42 (1) | | | | | | | +--Sphingomonas sp. CJ70 (1) | | | | | | | +--Sphingomonas (1) | | | | | | | +--Sphingomonas sanxanigenens DSM 19645 = NX02 (1) | | | | | +--Rhodobacterales (10) | | | | | +--Rhodobacteraceae (10) | | | | | +--Roseobacter sp. SK209-2-6 (1) | | | | | +--Candidatus Rhodobacter lobularis (1) | | | | | +--Ruegeria pomeroyi DSS-3 (2) | | | | | +--Citreicella sp. CK-I3-6 (1) | | | | | +--Roseovarius aestuarii (1) | | | | | +--Loktanella sp. S4079 (1) | | | | | +--Thalassococcus halodurans (1) | | | | | +--Roseovarius albus (2) | | | +--Gammaproteobacteria (21) | | | | | +--Methylococcales (3) | | | | | | | +--Crenotrichaceae (1) | | | | | | | | | +--Crenothrix polyspora (1) | | | | | | | +--Methylococcaceae (2) | | | | | | | +--Methylomagnum ishizawai (2) | | | | | +--unclassifiedGammaproteobacteria (1) | | | | | | | +--Competibacteraceae (1) | | | | | | | +--CandidatusCompetibacter (1) | | | | | | | +--Candidatus Competibacter denitrificans Run_A_D11 (1) | | | | | +--Enterobacteriales (4) | | | | | | | +--Enterobacteriaceae (4) | | | | | | | +--Salmonella (2) | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (2) | | | | | | | +--Budvicia aquatica (2) | | | | | +--Oceanospirillales (2) | | | | | | | +--Oleiphilaceae (1) | | | | | | | | | +--Oleiphilus messinensis (1) | | | | | | | +--Hahellaceae (1) | | | | | | | +--Hahella chejuensis KCTC 2396 (1) | | | | | +--Cardiobacteriales (6) | | | | | | | +--Cardiobacteriaceae (6) | | | | | | | +--Cardiobacterium valvarum (2) | | | | | | | +--Cardiobacterium hominis ATCC 15826 (4) | | | | | +--Pseudomonadales (5) | | | | | +--Pseudomonadaceae (5) | | | | | +--Pseudomonas fulva 12-X (2) | | | | | +--Pseudomonas sp. StFLB209 (1) | | | | | +--Pseudomonas sp. FeS53a (2) | | | +--Betaproteobacteria (11) | | | | | +--unclassifiedBetaproteobacteria (1) | | | | | | | +--beta proteobacterium AAP65 (1) | | | | | +--Burkholderiales (5) | | | | | | | +--Methylibium sp. NS21 (1) | | | | | | | +--unclassifiedBurkholderiales (2) | | | | | | | | | +--BurkholderialesGeneraincertaesedis (2) | | | | | | | | | +--Rhizobacter sp. Root1221 (1) | | | | | | | | | +--Mitsuaria sp. 7 (1) | | | | | | | +--Comamonadaceae (2) | | | | | | | +--Acidovorax valerianellae (1) | | | | | | | +--Acidovorax avenae subsp. avenae ATCC 19860 (1) | | | | | +--Neisseriales (5) | | | | | +--Chromobacteriaceae (1) | | | | | | | +--Andreprevotia (1) | | | | | | | +--Andreprevotia lacus DSM 23236 (1) | | | | | +--Neisseriaceae (4) | | | | | +--Neisseria shayeganii 871 (2) | | | | | +--Neisseria elongata subsp. glycolytica ATCC 29315 (2) | | | +--gamma proteobacterium TUD-JY37 (2) | +--Verrucomicrobia (6) | | | +--Opitutae (1) | | | | | +--Puniceicoccales (1) | | | | | +--Puniceicoccaceae (1) | | | | | +--Pelagicoccus mobilis (1) | | | +--Spartobacteria (1) | | | | | +--Chthoniobacter flavus Ellin428 (1) | | | +--Verrucomicrobiae (3) | | | | | +--Verrucomicrobiales (3) | | | | | +--Verrucomicrobiaceae (3) | | | | | +--Prosthecobacter sp. DC2c-30 (1) | | | | | +--Persicirhabdus sediminis (1) | | | | | +--Luteolibacter pohnpeiensis (1) | | | +--Verrucomicrobia bacterium YC6886 (1) | +--PVCgroup (15) | | | +--Verrucomicrobiota (7) | | | | | +--Verrucomicrobiae (7) | | | | | +--Verrucomicrobiales (7) | | | | | +--Verrucomicrobiaceae (5) | | | | | | | +--Luteolibacter ambystomatis (1) | | | | | | | +--Verrucomicrobiaceae bacterium (2) | | | | | | | +--Luteolibacter yonseiensis (2) | | | | | +--Verrucomicrobiales bacterium VVV1 (2) | | | +--Planctomycetota (5) | | | | | +--Planctomycetia (5) | | | | | +--Pirellulales (5) | | | | | +--Lacipirellulaceae (5) | | | | | +--Lacipirellula parvula (1) | | | | | +--Aeoliella mucimassa (1) | | | | | +--Lacipirellula limnantheis (1) | | | | | +--Adhaeretor mobilis (2) | | | +--Planctomycetes (1) | | | | | +--Planctomycetia (1) | | | | | +--Planctomycetales (1) | | | | | +--Planctomycetaceae (1) | | | | | +--Planctomyces sp. SH-PL14 (1) | | | +--Verrucomicrobia (2) | | | +--Verrucomicrobiae (2) | | | +--Verrucomicrobiales (2) | | | +--Rubritaleaceae (2) | | | +--Rubritalea (2) | | | +--Rubritalea squalenifaciens DSM 18772 (2) | +--Pseudomonadota (45) | +--Alphaproteobacteria (20) | | | +--Hyphomicrobiales (3) | | | | | +--Rhizobiaceae (2) | | | | | | | +--Endobacterium cereale (1) | | | | | | | +--Rhizobium/Agrobacteriumgroup (1) | | | | | | | +--Rhizobium (1) | | | | | | | +--Rhizobium sp. BK376 (1) | | | | | +--Phyllobacteriaceae (1) | | | | | +--Mesorhizobium sanjuanii (1) | | | +--Sphingomonadales (9) | | | | | +--Erythrobacteraceae (2) | | | | | | | +--Erythrobacter/Porphyrobactergroup (1) | | | | | | | | | +--Erythrobacter aureus (1) | | | | | | | +--Croceibacterium salegens (1) | | | | | +--Sphingomonadaceae (5) | | | | | | | +--Sphingomonas aerophila (2) | | | | | | | +--Sphingomonas deserti (1) | | | | | | | +--Novosphingobium (1) | | | | | | | | | +--Novosphingobium sp. MD-1 (1) | | | | | | | +--Sphingomonas (1) | | | | | | | +--Sphingomonas sp. CFBP 13720 (1) | | | | | +--Zymomonadaceae (2) | | | | | +--Zymomonas (2) | | | | | +--Zymomonas sp. (2) | | | +--Rhodobacterales (8) | | | +--Roseobacteraceae (5) | | | | | +--Pelagimonas phthalicica (1) | | | | | +--Thalassococcus (1) | | | | | | | +--Thalassococcus sp. S3 (1) | | | | | +--Loktanella (1) | | | | | | | +--Loktanella sp. IMCC34160 (1) | | | | | +--Roseobacter insulae (1) | | | | | +--Sulfitobacter undariae (1) | | | +--Paracoccaceae (3) | | | +--Profundibacter amoris (1) | | | +--Paenihalocynthiibacter styelae (2) | +--Gammaproteobacteria (12) | | | +--Methylococcales (1) | | | | | +--Methylococcaceae (1) | | | | | +--Methylocaldum marinum (1) | | | +--Enterobacterales (1) | | | | | +--Budviciaceae (1) | | | | | +--Limnobaculum parvum (1) | | | +--Xanthomonadales (3) | | | | | +--Xanthomonadaceae (3) | | | | | +--Lysobacter psychrotolerans (2) | | | | | +--Thermomonas carbonis (1) | | | +--Pseudomonadales (7) | | | +--Pseudomonadaceae (7) | | | +--Pseudomonas (7) | | | +--Pseudomonas sp. Boi14 (1) | | | +--Pseudomonas sp. GD03985 (2) | | | +--Pseudomonas sp. MRSN 12121 (2) | | | +--Pseudomonas sp. THAF187a (2) | +--Betaproteobacteria (13) | +--Burkholderiales (12) | | | +--Burkholderiales bacterium PBB4 (1) | | | +--Sphaerotilaceae (1) | | | | | +--Roseateles (1) | | | | | +--Pelomonas sp. HMWF004 (1) | | | +--Oxalobacteraceae (2) | | | | | +--Telluriagroup (1) | | | | | | | +--Massilia horti (1) | | | | | +--Noviherbaspirillum cavernae (1) | | | +--Comamonadaceae (8) | | | +--Hydrogenophaga (1) | | | | | +--Hydrogenophaga taeniospiralis CCUG 15921 (1) | | | +--Diaphorobacter (1) | | | | | +--Diaphorobacter sp. HDW4B (1) | | | +--Diaphorobacter aerolatus (1) | | | +--Caenimonas sedimenti (1) | | | +--Diaphorobacter ruginosibacter (1) | | | +--Ottowia testudinis (2) | | | +--Albitalea terrae (1) | +--Neisseriales (1) | +--Neisseriaceae (1) | +--Eikenella (1) | +--Eikenella corrodens CC92I (1)