# Species tree for RF02012 # Generated from Rfam version 15.00 | +--Eukaryota (256) | | | +--stramenopiles (3) | | | | | +--Bacillariophyta (2) | | | | | | | +--Bacillariophyceae (2) | | | | | | | +--Bacillariophycidae (2) | | | | | | | +--Bacillariales (2) | | | | | | | +--Bacillariaceae (2) | | | | | | | +--Nitzschia inconspicua (2) | | | | | +--PXclade (1) | | | | | +--Phaeophyceae (1) | | | | | +--Ectocarpales (1) | | | | | +--Ectocarpaceae (1) | | | | | +--Ectocarpus (1) | | | | | +--Ectocarpus sp. CCAP 1310/34 (1) | | | +--Metazoa (26) | | | | | +--Nematoda (11) | | | | | | | +--Chromadorea (11) | | | | | | | +--Oxyurida (1) | | | | | | | | | +--Oxyuroidea (1) | | | | | | | | | +--Oxyuridae (1) | | | | | | | | | +--Enterobius vermicularis (1) | | | | | | | +--Rhabditida (10) | | | | | | | +--Strongylida (10) | | | | | | | +--Strongyloidea (10) | | | | | | | +--Strongylidae (10) | | | | | | | +--Cyathostominae (10) | | | | | | | +--Cylicocyclus nassatus (10) | | | | | +--Chordata (1) | | | | | | | +--Craniata (1) | | | | | | | +--Vertebrata (1) | | | | | | | +--Euteleostomi (1) | | | | | | | +--Archosauria (1) | | | | | | | +--Dinosauria (1) | | | | | | | +--Saurischia (1) | | | | | | | +--Theropoda (1) | | | | | | | +--Coelurosauria (1) | | | | | | | +--Aves (1) | | | | | | | +--Palaeognathae (1) | | | | | | | +--Tinamiformes (1) | | | | | | | +--Tinamidae (1) | | | | | | | +--Crypturellus soui (1) | | | | | +--Arthropoda (14) | | | | | +--Hexapoda (10) | | | | | | | +--Insecta (10) | | | | | | | +--Pterygota (10) | | | | | | | +--Neoptera (10) | | | | | | | +--Endopterygota (5) | | | | | | | | | +--Lepidoptera (1) | | | | | | | | | | | +--Glossata (1) | | | | | | | | | | | +--Ditrysia (1) | | | | | | | | | | | +--Papilionoidea (1) | | | | | | | | | | | +--Nymphalidae (1) | | | | | | | | | | | +--Satyrinae (1) | | | | | | | | | | | +--Satyrini (1) | | | | | | | | | | | +--Parargina (1) | | | | | | | | | | | +--Pararge aegeria aegeria (1) | | | | | | | | | +--Hymenoptera (2) | | | | | | | | | | | +--Apocrita (2) | | | | | | | | | | | +--Aculeata (2) | | | | | | | | | | | +--Vespoidea (2) | | | | | | | | | | | +--Formicidae (2) | | | | | | | | | | | +--Formicinae (1) | | | | | | | | | | | | | +--Lasius (1) | | | | | | | | | | | | | +--Lasius niger (1) | | | | | | | | | | | +--Myrmicinae (1) | | | | | | | | | | | +--Atta colombica (1) | | | | | | | | | +--Diptera (2) | | | | | | | | | +--Brachycera (2) | | | | | | | | | +--Muscomorpha (2) | | | | | | | | | +--Oestroidea (1) | | | | | | | | | | | +--Calliphoridae (1) | | | | | | | | | | | +--Luciliinae (1) | | | | | | | | | | | +--Lucilia cuprina (1) | | | | | | | | | +--Ephydroidea (1) | | | | | | | | | +--Drosophilidae (1) | | | | | | | | | +--Drosophila (1) | | | | | | | | | +--Drosophila rhopaloa (1) | | | | | | | +--Paraneoptera (5) | | | | | | | +--Hemiptera (5) | | | | | | | +--Euhemiptera (5) | | | | | | | +--Fulgoroidea (5) | | | | | | | +--Delphacidae (5) | | | | | | | +--Criomorphinae (5) | | | | | | | +--Laodelphax striatellus (small brown planthopper) (5) | | | | | +--Crustacea (1) | | | | | | | +--Malacostraca (1) | | | | | | | +--Eumalacostraca (1) | | | | | | | +--Peracarida (1) | | | | | | | +--Isopoda (1) | | | | | | | +--Oniscidea (1) | | | | | | | +--Crinocheta (1) | | | | | | | +--Armadillidiidae (1) | | | | | | | +--Armadillidium nasatum (1) | | | | | +--Chelicerata (3) | | | | | +--Arachnida (3) | | | | | +--Acari (2) | | | | | | | +--Parasitiformes (2) | | | | | | | +--Ixodida (1) | | | | | | | | | +--Ixodoidea (1) | | | | | | | | | +--Ixodidae (1) | | | | | | | | | +--Ixodinae (1) | | | | | | | | | +--Ixodes scapularis (black-legged tick) (1) | | | | | | | +--Mesostigmata (1) | | | | | | | +--Dermanyssina (1) | | | | | | | +--Dermanyssoidea (1) | | | | | | | +--Varroidae (1) | | | | | | | +--Varroa destructor (honeybee mite) (1) | | | | | +--Araneae (1) | | | | | +--Araneomorphae (1) | | | | | +--Entelegynae (1) | | | | | +--Araneoidea (1) | | | | | +--Nephilidae (1) | | | | | +--Nephila pilipes (1) | | | +--Fungi (130) | | | | | +--Chytridiomycota (1) | | | | | | | +--Chytridiomycetes (1) | | | | | | | +--Spizellomycetales (1) | | | | | | | +--Spizellomycetaceae (1) | | | | | | | +--Powellomyces hirtus (1) | | | | | +--Glomeromycota (6) | | | | | | | +--Glomeromycetes (6) | | | | | | | +--Paraglomerales (3) | | | | | | | | | +--Paraglomeraceae (3) | | | | | | | | | +--Paraglomus brasilianum (3) | | | | | | | +--Glomerales (3) | | | | | | | +--Glomeraceae (3) | | | | | | | +--Glomus irregulare (2) | | | | | | | +--Funneliformis caledonium (1) | | | | | +--Dikarya (113) | | | | | | | +--Ascomycota (54) | | | | | | | | | +--Pezizomycotina (49) | | | | | | | | | | | +--Eurotiomycetes (12) | | | | | | | | | | | | | +--Eurotiomycetidae (12) | | | | | | | | | | | | | +--Onygenales (12) | | | | | | | | | | | | | +--mitosporicOnygenales (4) | | | | | | | | | | | | | | | +--Coccidioides immitis RS (2) | | | | | | | | | | | | | | | +--Coccidioides immitis RMSCC 3703 (2) | | | | | | | | | | | | | +--Ajellomycetaceae (7) | | | | | | | | | | | | | | | +--Ajellomyces capsulatus H143 (1) | | | | | | | | | | | | | | | +--Ajellomyces capsulatus H88 (1) | | | | | | | | | | | | | | | +--Ajellomyces capsulatus NAm1 (2) | | | | | | | | | | | | | | | +--Ajellomyces dermatitidis SLH14081 (3) | | | | | | | | | | | | | +--Ascosphaeraceae (1) | | | | | | | | | | | | | +--Ascosphaera apis ARSEF 7405 (1) | | | | | | | | | | | +--Leotiomycetes (13) | | | | | | | | | | | | | +--Erysiphales (5) | | | | | | | | | | | | | | | +--Erysiphaceae (5) | | | | | | | | | | | | | | | +--Golovinomyces cichoracearum (1) | | | | | | | | | | | | | | | +--mitosporicErysiphaceae (1) | | | | | | | | | | | | | | | | | +--Oidium neolycopersici (1) | | | | | | | | | | | | | | | +--Erysiphe necator (grape powdery mildew) (3) | | | | | | | | | | | | | +--Helotiales (8) | | | | | | | | | | | | | +--Helotiaceae (2) | | | | | | | | | | | | | | | +--Hymenoscyphus albidus (1) | | | | | | | | | | | | | | | +--Hymenoscyphus pseudoalbidus (1) | | | | | | | | | | | | | +--Sclerotiniaceae (6) | | | | | | | | | | | | | +--Sclerotinia nivalis (2) | | | | | | | | | | | | | +--Monilinia fructigena (3) | | | | | | | | | | | | | +--Sclerotinia sclerotiorum 1980 UF-70 (1) | | | | | | | | | | | +--Dothideomycetes (7) | | | | | | | | | | | | | +--Dothideomycetesincertaesedis (5) | | | | | | | | | | | | | | | +--Botryosphaeriales (2) | | | | | | | | | | | | | | | | | +--Botryosphaeriaceae (2) | | | | | | | | | | | | | | | | | +--Botryosphaeria dothidea (1) | | | | | | | | | | | | | | | | | +--mitosporicBotryosphaeriaceae (1) | | | | | | | | | | | | | | | | | +--Diplodia seriata (1) | | | | | | | | | | | | | | | +--Venturiales (3) | | | | | | | | | | | | | | | +--Sympoventuriaceae (2) | | | | | | | | | | | | | | | | | +--mitosporicSympoventuriaceae (2) | | | | | | | | | | | | | | | | | +--Fusicladium effusum (2) | | | | | | | | | | | | | | | +--Venturiaceae (1) | | | | | | | | | | | | | | | +--Venturia inaequalis (1) | | | | | | | | | | | | | +--Pleosporomycetidae (2) | | | | | | | | | | | | | +--Pleosporomycetidaeincertaesedis (1) | | | | | | | | | | | | | | | +--Gloniaceae (1) | | | | | | | | | | | | | | | +--Glonium stellatum (1) | | | | | | | | | | | | | +--Pleosporales (1) | | | | | | | | | | | | | +--Pleosporineae (1) | | | | | | | | | | | | | +--Leptosphaeriaceae (1) | | | | | | | | | | | | | +--Leptosphaeria (1) | | | | | | | | | | | | | +--Leptosphaeria maculans JN3 (1) | | | | | | | | | | | +--Sordariomycetes (17) | | | | | | | | | | | +--Hypocreomycetidae (2) | | | | | | | | | | | | | +--Hypocreales (1) | | | | | | | | | | | | | | | +--Ophiocordycipitaceae (1) | | | | | | | | | | | | | | | +--Ophiocordyceps unilateralis (1) | | | | | | | | | | | | | +--Microascales (1) | | | | | | | | | | | | | +--Ceratocystidaceae (1) | | | | | | | | | | | | | +--Ceratocystis radicicola (1) | | | | | | | | | | | +--Sordariomycetidae (5) | | | | | | | | | | | | | +--Magnaporthales (3) | | | | | | | | | | | | | | | +--Magnaporthaceae (3) | | | | | | | | | | | | | | | +--Magnaporthe poae ATCC 64411 (2) | | | | | | | | | | | | | | | +--Gaeumannomyces graminis var. tritici R3-111a-1 (1) | | | | | | | | | | | | | +--Diaporthales (1) | | | | | | | | | | | | | | | +--Diaporthaceae (1) | | | | | | | | | | | | | | | +--Diaporthe helianthi (1) | | | | | | | | | | | | | +--Sordariales (1) | | | | | | | | | | | | | +--Sordarialesincertaesedis (1) | | | | | | | | | | | | | +--Monosporascus sp. mg162 (1) | | | | | | | | | | | +--Xylariomycetidae (10) | | | | | | | | | | | +--Xylariales (10) | | | | | | | | | | | +--Xylariaceae (10) | | | | | | | | | | | +--Rosellinia necatrix (1) | | | | | | | | | | | +--Xylaria grammica (3) | | | | | | | | | | | +--Xylaria multiplex (6) | | | | | | | | | +--Saccharomycotina (5) | | | | | | | | | +--Saccharomycetes (5) | | | | | | | | | +--Saccharomycetales (5) | | | | | | | | | +--mitosporicSaccharomycetales (2) | | | | | | | | | | | +--Candida inconspicua (1) | | | | | | | | | | | +--Candida californica (1) | | | | | | | | | +--Saccharomycetalesincertaesedis (2) | | | | | | | | | | | +--Ogataea polymorpha (2) | | | | | | | | | +--Saccharomycetaceae (1) | | | | | | | | | +--Pichia pijperi (1) | | | | | | | +--Basidiomycota (59) | | | | | | | +--Ustilaginomycotina (52) | | | | | | | | | +--Ustilaginomycetes (52) | | | | | | | | | +--Ustilaginales (52) | | | | | | | | | +--Ustilaginaceae (52) | | | | | | | | | +--Ustilago bromivora (2) | | | | | | | | | +--mitosporicUstilaginaceae (50) | | | | | | | | | +--Pseudozyma flocculosa (50) | | | | | | | +--Pucciniomycotina (2) | | | | | | | | | +--Microbotryomycetes (2) | | | | | | | | | +--Microbotryales (2) | | | | | | | | | +--Microbotryaceae (2) | | | | | | | | | +--Microbotryum violaceum p1A1 Lamole (2) | | | | | | | +--Agaricomycotina (5) | | | | | | | +--Agaricomycetes (5) | | | | | | | +--Cantharellales (1) | | | | | | | | | +--Ceratobasidiaceae (1) | | | | | | | | | +--Rhizoctonia solani (1) | | | | | | | +--Russulales (1) | | | | | | | | | +--Bondarzewiaceae (1) | | | | | | | | | +--Bondarzewia mesenterica (1) | | | | | | | +--Agaricomycetidae (3) | | | | | | | +--Agaricales (3) | | | | | | | +--Schizophyllaceae (2) | | | | | | | | | +--Grifola frondosa (2) | | | | | | | +--Marasmiaceae (1) | | | | | | | +--Lentinula edodes (shiitake mushroom) (1) | | | | | +--Fungiincertaesedis (10) | | | | | +--Basalfungallineages (10) | | | | | +--Kickxellomycotina (2) | | | | | | | +--Harpellales (2) | | | | | | | +--Legeriomycetaceae (2) | | | | | | | +--Smittium simulii (2) | | | | | +--Mucoromycotina (8) | | | | | +--Mortierellales (5) | | | | | | | +--Mortierellaceae (5) | | | | | | | +--Mortierella gamsii (5) | | | | | +--Endogonales (3) | | | | | +--Endogonaceae (3) | | | | | +--Endogone flammicorona (3) | | | +--Viridiplantae (14) | | | | | +--Streptophyta (6) | | | | | | | +--Embryophyta (3) | | | | | | | | | +--Tracheophyta (3) | | | | | | | | | +--Spermatophyta (3) | | | | | | | | | +--Magnoliophyta (3) | | | | | | | | | +--eudicotyledons (3) | | | | | | | | | +--coreeudicotyledons (3) | | | | | | | | | +--rosids (2) | | | | | | | | | | | +--fabids (2) | | | | | | | | | | | +--Malpighiales (2) | | | | | | | | | | | +--Euphorbiaceae (2) | | | | | | | | | | | +--Acalyphoideae (2) | | | | | | | | | | | +--Acalypheae (2) | | | | | | | | | | | +--Ricinus communis (castor bean) (2) | | | | | | | | | +--asterids (1) | | | | | | | | | +--lamiids (1) | | | | | | | | | +--Solanales (1) | | | | | | | | | +--Solanaceae (1) | | | | | | | | | +--Solanoideae (1) | | | | | | | | | +--Capsiceae (1) | | | | | | | | | +--Capsicum annuum (1) | | | | | | | +--Streptophytina (3) | | | | | | | +--Embryophyta (3) | | | | | | | +--Marchantiophyta (3) | | | | | | | +--Marchantiopsida (3) | | | | | | | +--Marchantiidae (3) | | | | | | | +--Marchantiales (3) | | | | | | | +--Marchantiaceae (3) | | | | | | | +--Marchantia (3) | | | | | | | +--Marchantia polymorpha subsp. ruderalis (3) | | | | | +--Chlorophyta (8) | | | | | +--Chlorophyceae (7) | | | | | | | +--Chlamydomonadales (1) | | | | | | | | | +--Volvocaceae (1) | | | | | | | | | +--Volvox africanus (1) | | | | | | | +--Sphaeropleales (6) | | | | | | | +--Selenastraceae (3) | | | | | | | | | +--Monoraphidium neglectum (3) | | | | | | | +--Scenedesmaceae (3) | | | | | | | +--Scenedesmus obliquus (3) | | | | | +--corechlorophytes (1) | | | | | +--Trebouxiophyceae (1) | | | | | +--Trebouxiophyceaeincertaesedis (1) | | | | | +--Elliptochlorisclade (1) | | | | | +--Coccomyxa (1) | | | | | +--Coccomyxa sp. Obi (1) | | | +--Opisthokonta (83) | | | +--Metazoa (11) | | | | | +--Eumetazoa (11) | | | | | +--Bilateria (11) | | | | | +--Protostomia (11) | | | | | +--Ecdysozoa (11) | | | | | +--Panarthropoda (11) | | | | | +--Arthropoda (11) | | | | | +--Mandibulata (1) | | | | | | | +--Pancrustacea (1) | | | | | | | +--Hexapoda (1) | | | | | | | +--Insecta (1) | | | | | | | +--Dicondylia (1) | | | | | | | +--Pterygota (1) | | | | | | | +--Neoptera (1) | | | | | | | +--Endopterygota (1) | | | | | | | +--Coleoptera (1) | | | | | | | +--Polyphaga (1) | | | | | | | +--Cucujiformia (1) | | | | | | | +--Cucujoidea (1) | | | | | | | +--Nitidulidae (1) | | | | | | | +--Meligethinae (1) | | | | | | | +--Brassicogethes aeneus (rape pollen beetle) (1) | | | | | +--Chelicerata (10) | | | | | +--Arachnida (10) | | | | | +--Araneae (10) | | | | | +--Araneomorphae (10) | | | | | +--Entelegynae (10) | | | | | +--Orbiculariae (10) | | | | | +--Araneoidea (10) | | | | | +--Nephilidae (10) | | | | | +--Trichonephila clavata (joro spider) (8) | | | | | +--Trichonephila (2) | | | | | +--Trichonephila inaurata madagascariensis (2) | | | +--Fungi (72) | | | +--Mucoromycota (3) | | | | | +--Glomeromycotina (3) | | | | | +--Glomeromycetes (3) | | | | | +--Glomerales (3) | | | | | +--Glomeraceae (3) | | | | | +--Rhizophagus (3) | | | | | +--Rhizophagus irregularis DAOM 181602 (2) | | | | | +--Rhizophagus irregularis DAOM 197198w (1) | | | +--Dikarya (59) | | | | | +--Ascomycota (49) | | | | | | | +--saccharomyceta (49) | | | | | | | +--Pezizomycotina (46) | | | | | | | | | +--Pezizomycetes (6) | | | | | | | | | | | +--Pezizales (6) | | | | | | | | | | | +--Ascobolaceae (1) | | | | | | | | | | | | | +--Ascobolus (1) | | | | | | | | | | | | | +--Ascobolus immersus RN42 (1) | | | | | | | | | | | +--Pezizaceae (3) | | | | | | | | | | | | | +--Terfezia (3) | | | | | | | | | | | | | +--Terfezia boudieri ATCC MYA-4762 (3) | | | | | | | | | | | +--Tuberaceae (2) | | | | | | | | | | | +--Tuber (2) | | | | | | | | | | | +--Tuber melanosporum Mel28 (2) | | | | | | | | | +--Orbiliomycetes (2) | | | | | | | | | | | +--Orbiliales (2) | | | | | | | | | | | +--Orbiliaceae (2) | | | | | | | | | | | +--Drechslerella (2) | | | | | | | | | | | +--Drechslerella stenobrocha 248 (2) | | | | | | | | | +--leotiomyceta (38) | | | | | | | | | +--sordariomyceta (32) | | | | | | | | | | | +--Leotiomycetes (1) | | | | | | | | | | | | | +--Helotiales (1) | | | | | | | | | | | | | +--Rutstroemiaceae (1) | | | | | | | | | | | | | +--Rutstroemia (1) | | | | | | | | | | | | | +--Rutstroemia sp. NJR-2017a BBW (1) | | | | | | | | | | | +--Sordariomycetes (31) | | | | | | | | | | | +--Hypocreomycetidae (19) | | | | | | | | | | | | | +--Hypocreales (19) | | | | | | | | | | | | | +--Nectriaceae (3) | | | | | | | | | | | | | | | +--Fusarium (3) | | | | | | | | | | | | | | | +--Fusarium sp. NRRL 66182 (1) | | | | | | | | | | | | | | | +--Fusarium piperis (2) | | | | | | | | | | | | | +--Cordycipitaceae (1) | | | | | | | | | | | | | | | +--Cordyceps (1) | | | | | | | | | | | | | | | +--Cordyceps confragosa RCEF 1005 (1) | | | | | | | | | | | | | +--Hypocrealesincertaesedis (1) | | | | | | | | | | | | | | | +--Ustilaginoidea virens (1) | | | | | | | | | | | | | +--Ophiocordycipitaceae (13) | | | | | | | | | | | | | | | +--Ophiocordyceps (12) | | | | | | | | | | | | | | | | | +--Ophiocordyceps camponoti-leonardi (nom. inval.) (1) | | | | | | | | | | | | | | | | | +--Ophiocordyceps sinensis CO18 (4) | | | | | | | | | | | | | | | | | +--Ophiocordyceps camponoti-saundersi (nom. inval.) (2) | | | | | | | | | | | | | | | | | +--Ophiocordyceps polyrhachis-furcata BCC 54312 (5) | | | | | | | | | | | | | | | +--Ophiocordyceps australis (1) | | | | | | | | | | | | | +--Clavicipitaceae (1) | | | | | | | | | | | | | +--Metarhizium (1) | | | | | | | | | | | | | +--Metarhizium album ARSEF 1941 (1) | | | | | | | | | | | +--Sordariomycetidae (1) | | | | | | | | | | | | | +--Diaporthales (1) | | | | | | | | | | | | | +--Diaporthaceae (1) | | | | | | | | | | | | | +--Diaporthe ampelina (1) | | | | | | | | | | | +--Xylariomycetidae (11) | | | | | | | | | | | +--Xylariales (11) | | | | | | | | | | | +--Diatrypaceae (1) | | | | | | | | | | | | | +--Eutypa (1) | | | | | | | | | | | | | +--Eutypa lata UCREL1 (1) | | | | | | | | | | | +--Xylarialesincertaesedis (9) | | | | | | | | | | | | | +--Monosporascus (9) | | | | | | | | | | | | | +--Monosporascus sp. GIB2 (1) | | | | | | | | | | | | | +--Monosporascus sp. MC13-8B (4) | | | | | | | | | | | | | +--Monosporascus sp. 5C6A (1) | | | | | | | | | | | | | +--Monosporascus sp. CRB-9-2 (1) | | | | | | | | | | | | | +--Monosporascus sp. MG133 (1) | | | | | | | | | | | | | +--Monosporascus sp. CRB-8-3 (1) | | | | | | | | | | | +--Hypoxylaceae (1) | | | | | | | | | | | +--Hypoxylon (1) | | | | | | | | | | | +--Hypoxylon sp. CO27-5 (1) | | | | | | | | | +--Geoglossomycetes (3) | | | | | | | | | | | +--Geoglossales (3) | | | | | | | | | | | +--Geoglossaceae (3) | | | | | | | | | | | +--Glutinoglossum americanum (3) | | | | | | | | | +--Eurotiomycetes (1) | | | | | | | | | | | +--Eurotiomycetidae (1) | | | | | | | | | | | +--Onygenales (1) | | | | | | | | | | | +--Ajellomycetaceae (1) | | | | | | | | | | | +--Histoplasma (1) | | | | | | | | | | | +--Histoplasma ohiense (nom. inval.) (1) | | | | | | | | | +--dothideomyceta (2) | | | | | | | | | +--Dothideomycetes (2) | | | | | | | | | +--Dothideomycetesincertaesedis (2) | | | | | | | | | +--Botryosphaeriales (2) | | | | | | | | | +--Botryosphaeriaceae (2) | | | | | | | | | +--Macrophomina (1) | | | | | | | | | | | +--Macrophomina phaseolina MS6 (1) | | | | | | | | | +--Neofusicoccum (1) | | | | | | | | | +--Neofusicoccum parvum UCRNP2 (1) | | | | | | | +--Saccharomycotina (3) | | | | | | | +--Saccharomycetes (3) | | | | | | | +--Saccharomycetales (3) | | | | | | | +--Ascoideaceae (1) | | | | | | | | | +--Ascoidea (1) | | | | | | | | | +--Ascoidea rubescens DSM 1968 (1) | | | | | | | +--Phaffomycetaceae (2) | | | | | | | +--Wickerhamomyces mucosus (2) | | | | | +--Basidiomycota (10) | | | | | +--Agaricomycotina (10) | | | | | +--Agaricomycetes (10) | | | | | +--Agaricomycetesincertaesedis (5) | | | | | | | +--Hymenochaetales (4) | | | | | | | | | +--Hymenochaetaceae (4) | | | | | | | | | +--Pyrrhoderma noxium (4) | | | | | | | +--Cantharellales (1) | | | | | | | +--Ceratobasidiaceae (1) | | | | | | | +--Rhizoctonia (1) | | | | | | | +--Rhizoctonia solani AG-1 IB (1) | | | | | +--Agaricomycetidae (5) | | | | | +--Atheliales (1) | | | | | | | +--Atheliaceae (1) | | | | | | | +--Piloderma (1) | | | | | | | +--Piloderma croceum F 1598 (1) | | | | | +--Agaricales (4) | | | | | +--Lyophyllaceae (1) | | | | | | | +--Termitomyces sp. J132 (1) | | | | | +--Marasmiineae (3) | | | | | +--Omphalotaceae (3) | | | | | +--Collybiopsis confluens (3) | | | +--Microsporidia (1) | | | | | +--Apansporoblastina (1) | | | | | +--Nosematidae (1) | | | | | +--Nosema (1) | | | | | +--Nosema bombycis CQ1 (1) | | | +--Fungiincertaesedis (9) | | | +--Mucoromycota (9) | | | +--Mortierellomycotina (1) | | | | | +--Mortierellomycetes (1) | | | | | +--Mortierellales (1) | | | | | +--Mortierellaceae (1) | | | | | +--Modicella reniformis (1) | | | +--Glomeromycotina (2) | | | | | +--Glomeromycetes (2) | | | | | +--Glomerales (2) | | | | | +--Glomeraceae (2) | | | | | +--Rhizophagus (2) | | | | | +--Rhizophagus sp. MUCL 43196 (2) | | | +--Mucoromycotina (6) | | | +--Endogonomycetes (3) | | | | | +--Endogonales (3) | | | | | +--Endogonaceae (3) | | | | | +--Endogone (3) | | | | | +--Endogone sp. FLAS-F59071 (3) | | | +--Mucoromycetes (3) | | | +--Mucorales (3) | | | +--Mucorineae (3) | | | +--Mucoraceae (3) | | | +--Apophysomyces (3) | | | +--Apophysomyces sp. BC1034 (3) | +--Bacteria (1072) | | | +--bacterium 1xD8-6 (1) | | | +--Nitrospirota (2) | | | | | +--Nitrospiria (2) | | | | | +--CandidatusTroglogloeales (2) | | | | | +--CandidatusManganitrophaceae (2) | | | | | +--Candidatus Manganitrophus noduliformans (2) | | | +--actinobacterium OB1 (1) | | | +--Bacteroidetes (33) | | | | | +--Sphingobacteriia (3) | | | | | | | +--Sphingobacteriales (3) | | | | | | | +--Sphingobacteriaceae (1) | | | | | | | | | +--Pedobacter hartonius (1) | | | | | | | +--Sphingobacteriaceae bacterium Gsoil 809 (1) | | | | | | | +--Saprospiraceae (1) | | | | | | | +--Haliscomenobacter hydrossis DSM 1100 (1) | | | | | +--Bacteroidia (22) | | | | | | | +--Bacteroidales (19) | | | | | | | | | +--Marinilabiaceae (1) | | | | | | | | | | | +--Marinilabilia salmonicolor (1) | | | | | | | | | +--Rikenellaceae (3) | | | | | | | | | | | +--Alistipes shahii WAL 8301 (2) | | | | | | | | | | | +--Alistipes onderdonkii (1) | | | | | | | | | +--Porphyromonadaceae (3) | | | | | | | | | | | +--Tannerella sp. oral taxon 808 (1) | | | | | | | | | | | +--Dysgonomonas hofstadii (2) | | | | | | | | | +--Bacteroidaceae (12) | | | | | | | | | +--Bacteroides thetaiotaomicron VPI-5482 (1) | | | | | | | | | +--Bacteroides fluxus YIT 12057 (3) | | | | | | | | | +--Bacteroides caccae (2) | | | | | | | | | +--Bacteroides fragilis NCTC 9343 (1) | | | | | | | | | +--Bacteroides pyogenes (1) | | | | | | | | | +--Bacteroides finegoldii (1) | | | | | | | | | +--Bacteroides vulgatus ATCC 8482 (3) | | | | | | | +--Bacteroidales bacterium SC/BZ-SP2 (3) | | | | | +--Cytophagia (8) | | | | | +--Cytophagales (8) | | | | | +--Cyclobacteriaceae (7) | | | | | | | +--Cyclobacterium lianum (7) | | | | | +--Cytophagaceae (1) | | | | | +--Dyadobacter koreensis (1) | | | +--Campylobacterota (1) | | | | | +--Epsilonproteobacteria (1) | | | | | +--Campylobacterales (1) | | | | | +--Arcobacteraceae (1) | | | | | +--Arcobacter caeni (1) | | | +--Calditrichaeota (1) | | | | | +--Calditrichae (1) | | | | | +--Calditrichales (1) | | | | | +--Calditrichaceae (1) | | | | | +--Caldithrix (1) | | | | | +--Caldithrix abyssi DSM 13497 (1) | | | +--Pseudomonadota (182) | | | | | +--Alphaproteobacteria (8) | | | | | | | +--Hyphomicrobiales (1) | | | | | | | | | +--Brucellaceae (1) | | | | | | | | | +--Brucella/Ochrobactrumgroup (1) | | | | | | | | | +--Brucella endophytica (1) | | | | | | | +--Rickettsiales (5) | | | | | | | | | +--Rickettsiales endosymbiont of Peranema trichophorum (5) | | | | | | | +--Hyphomonadales (1) | | | | | | | | | +--Hyphomonadaceae (1) | | | | | | | | | +--Hyphomonas chukchiensis (1) | | | | | | | +--Rhodobacterales (1) | | | | | | | +--Paracoccaceae (1) | | | | | | | +--Paracoccus onubensis (1) | | | | | +--Gammaproteobacteria (86) | | | | | | | +--Enterobacterales (20) | | | | | | | | | +--Yersiniaceae (1) | | | | | | | | | | | +--Candidatus Fukatsuia symbiotica (1) | | | | | | | | | +--Pectobacteriaceae (1) | | | | | | | | | | | +--Acerihabitans arboris (1) | | | | | | | | | +--Enterobacteriaceae (1) | | | | | | | | | | | +--Jejubacter calystegiae (1) | | | | | | | | | +--Morganellaceae (12) | | | | | | | | | | | +--Arsenophonus (12) | | | | | | | | | | | +--Arsenophonus sp. ENCA (11) | | | | | | | | | | | +--Arsenophonus endosymbiont of Aleurodicus floccissimus (1) | | | | | | | | | +--Erwiniaceae (1) | | | | | | | | | | | +--Izhakiella capsodis (1) | | | | | | | | | +--Bruguierivoracaceae (4) | | | | | | | | | +--Sodalis (4) | | | | | | | | | +--Sodalis-like symbiont of Philaenus spumarius (4) | | | | | | | +--Nevskiales (1) | | | | | | | | | +--Nevskiaceae (1) | | | | | | | | | +--Solimonas fluminis (1) | | | | | | | +--Methylococcales (2) | | | | | | | | | +--Methylococcaceae (2) | | | | | | | | | +--Methylomonas (1) | | | | | | | | | | | +--Methylomonas sp. LL1 (1) | | | | | | | | | +--Methylocaldum marinum (1) | | | | | | | +--Acidiferrobacterales (2) | | | | | | | | | +--Acidiferrobacteraceae (2) | | | | | | | | | +--Sulfurifustis variabilis (1) | | | | | | | | | +--Sulfuricaulis limicola (1) | | | | | | | +--Alteromonadales (14) | | | | | | | | | +--Colwelliaceae (7) | | | | | | | | | | | +--Colwellia (7) | | | | | | | | | | | +--Colwellia sp. 12G3 (4) | | | | | | | | | | | +--Colwellia sp. C1TZA3 (3) | | | | | | | | | +--Shewanellaceae (5) | | | | | | | | | | | +--Parashewanella curva (5) | | | | | | | | | +--Alteromonadaceae (2) | | | | | | | | | +--Paraglaciecola (1) | | | | | | | | | | | +--Paraglaciecola sp. MB-3u-78 (1) | | | | | | | | | +--Alteromonas/Salinimonasgroup (1) | | | | | | | | | +--Alteromonas sediminis (1) | | | | | | | +--Vibrionales (25) | | | | | | | | | +--Vibrionaceae (25) | | | | | | | | | +--Vibrio toranzoniae (1) | | | | | | | | | +--Vibrio thalassae (19) | | | | | | | | | +--Vibrio viridaestus (2) | | | | | | | | | +--Vibrio eleionomae (1) | | | | | | | | | +--Vibrio (1) | | | | | | | | | | | +--Vibrio sp. 10N.286.49.B3 (1) | | | | | | | | | +--Vibrio agarilyticus (1) | | | | | | | +--Cellvibrionales (1) | | | | | | | | | +--Microbulbiferaceae (1) | | | | | | | | | +--Microbulbifer rhizosphaerae (1) | | | | | | | +--Xanthomonadales (3) | | | | | | | | | +--Rhodanobacteraceae (3) | | | | | | | | | +--Mizugakiibacter sediminis (1) | | | | | | | | | +--Dyella choica (1) | | | | | | | | | +--Rhodanobacter (1) | | | | | | | | | +--Rhodanobacter sp. MP7CTX1 (1) | | | | | | | +--Chromatiales (4) | | | | | | | | | +--Chromatiaceae (4) | | | | | | | | | +--Candidatus Thiodictyon syntrophicum (4) | | | | | | | +--Thiotrichales (2) | | | | | | | | | +--Fastidiosibacteraceae (2) | | | | | | | | | +--Cysteiniphilum litorale (2) | | | | | | | +--Oceanospirillales (4) | | | | | | | | | +--Halomonadaceae (1) | | | | | | | | | | | +--Halomonas (1) | | | | | | | | | | | +--Halomonas sp. GFAJ-1 (1) | | | | | | | | | +--Oceanospirillaceae (3) | | | | | | | | | +--Nitrincola tibetensis (1) | | | | | | | | | +--Motiliproteus coralliicola (1) | | | | | | | | | +--Marinobacterium marinum (1) | | | | | | | +--Pseudomonadales (8) | | | | | | | +--Marinobacteraceae (1) | | | | | | | | | +--Marinobacter (1) | | | | | | | | | +--Marinobacter sp. B9-2 (1) | | | | | | | +--Pseudomonadaceae (7) | | | | | | | +--Pseudomonas oryzae (1) | | | | | | | +--Pseudomonas (3) | | | | | | | | | +--Pseudomonas sp. ABC1 (1) | | | | | | | | | +--Pseudomonas sp. C27(2019) (1) | | | | | | | | | +--Pseudomonas sp. v388 (1) | | | | | | | +--Azotobactergroup (2) | | | | | | | | | +--Azotobacter (2) | | | | | | | | | +--Azotobacter chroococcum NCIMB 8003 (2) | | | | | | | +--Pseudomonas carbonaria (1) | | | | | +--Betaproteobacteria (87) | | | | | | | +--Burkholderiales (81) | | | | | | | | | +--Burkholderialesgeneraincertaesedis (3) | | | | | | | | | | | +--Thiomonas (3) | | | | | | | | | | | +--Thiomonas sp. X19 (3) | | | | | | | | | +--Burkholderiaceae (56) | | | | | | | | | | | +--Paraburkholderia monticola (1) | | | | | | | | | | | +--Paraburkholderia ultramafica (3) | | | | | | | | | | | +--Cupriavidus agavae (1) | | | | | | | | | | | +--Paraburkholderia lacunae (3) | | | | | | | | | | | +--Paraburkholderia (13) | | | | | | | | | | | | | +--Paraburkholderia sp. LEh10 (5) | | | | | | | | | | | | | +--Paraburkholderia sp. BL23I1N1 (5) | | | | | | | | | | | | | +--Paraburkholderia sp. BL10I2N1 (3) | | | | | | | | | | | +--Caballeronia (2) | | | | | | | | | | | | | +--Caballeronia sp. SBC1 (2) | | | | | | | | | | | +--Paraburkholderia fynbosensis (1) | | | | | | | | | | | +--Paraburkholderia panacisoli (8) | | | | | | | | | | | +--Paraburkholderia saeva (1) | | | | | | | | | | | +--Paraburkholderia steynii (5) | | | | | | | | | | | +--Pandoraea terrae (2) | | | | | | | | | | | +--Cupriavidus yeoncheonensis (3) | | | | | | | | | | | +--Paraburkholderia tagetis (2) | | | | | | | | | | | +--Caballeronia concitans (1) | | | | | | | | | | | +--Mycoavidus cysteinexigens (10) | | | | | | | | | +--Oxalobacteraceae (10) | | | | | | | | | | | +--Noviherbaspirillum denitrificans (1) | | | | | | | | | | | +--Telluriagroup (4) | | | | | | | | | | | | | +--Massilia eurypsychrophila (2) | | | | | | | | | | | | | +--Massilia psychrophila (1) | | | | | | | | | | | | | +--Duganella (1) | | | | | | | | | | | | | +--Duganella sp. CF517 (1) | | | | | | | | | | | +--Noviherbaspirillum pedocola (3) | | | | | | | | | | | +--Glaciimonas soli (1) | | | | | | | | | | | +--Noviherbaspirillum galbum (1) | | | | | | | | | +--Comamonadaceae (12) | | | | | | | | | +--Hydrogenophaga (1) | | | | | | | | | | | +--Hydrogenophaga sp. BPS33 (1) | | | | | | | | | +--Diaphorobacter (1) | | | | | | | | | | | +--Diaphorobacter sp. HDW4B (1) | | | | | | | | | +--Comamonas flocculans (1) | | | | | | | | | +--Polaromonas (1) | | | | | | | | | | | +--Polaromonas sp. OV174 (1) | | | | | | | | | +--Acidovorax (1) | | | | | | | | | | | +--Acidovorax sp. HDW3 (1) | | | | | | | | | +--Caenimonas sedimenti (3) | | | | | | | | | +--Rhodoferax sediminis (2) | | | | | | | | | +--Hydrogenophaga aromaticivorans (2) | | | | | | | +--Rhodocyclales (3) | | | | | | | | | +--Azonexaceae (1) | | | | | | | | | | | +--Dechloromonas (1) | | | | | | | | | | | +--Dechloromonas sp. (1) | | | | | | | | | +--Zoogloeaceae (2) | | | | | | | | | +--Thauera propionica (1) | | | | | | | | | +--Pseudothauera lacus (1) | | | | | | | +--Nitrosomonadales (3) | | | | | | | +--Gallionellaceae (3) | | | | | | | +--Sideroxydans (3) | | | | | | | +--Sideroxydans sp. CL21 (3) | | | | | +--Hydrogenophilia (1) | | | | | +--Hydrogenophilaliaincertaesedis (1) | | | | | +--Pelomicrobium methylotrophicum (1) | | | +--Chlamydiae (1) | | | | | +--Chlamydiales (1) | | | | | +--Simkaniaceae (1) | | | | | +--Simkania negevensis Z (1) | | | +--Cyanobacteria (34) | | | | | +--Nostocales (7) | | | | | | | +--Nostocaceae (6) | | | | | | | | | +--Cylindrospermum stagnale PCC 7417 (3) | | | | | | | | | +--Anabaena cylindrica PCC 7122 (3) | | | | | | | +--Rivulariaceae (1) | | | | | | | +--Calothrix desertica PCC 7102 (1) | | | | | +--Chroococcales (27) | | | | | +--Synechococcus sp. PCC 7335 (1) | | | | | +--Thermosynechococcus elongatus BP-1 (26) | | | +--Acidobacteriota (2) | | | | | +--Terriglobia (2) | | | | | +--Terriglobales (2) | | | | | +--Acidobacteriaceae (2) | | | | | +--Edaphobacter lichenicola (1) | | | | | +--Acidisarcina polymorpha (1) | | | +--Acidobacteria (6) | | | | | +--Acidobacteriia (1) | | | | | | | +--Acidobacteriales (1) | | | | | | | +--Acidobacteriaceae (1) | | | | | | | +--Granulicella (1) | | | | | | | +--Granulicella tundricola MP5ACTX9 (1) | | | | | +--Acidobacteriales (5) | | | | | +--Acidobacteriaceae bacterium 277 (2) | | | | | +--Acidobacteriaceae (3) | | | | | +--Granulicella rosea (1) | | | | | +--Terriglobus saanensis SP1PR4 (2) | | | +--Fusobacteria (1) | | | | | +--Fusobacteriales (1) | | | | | +--Fusobacteriaceae (1) | | | | | +--Streptobacillus moniliformis DSM 12112 (1) | | | +--PVCgroup (5) | | | | | +--Verrucomicrobiota (3) | | | | | | | +--Verrucomicrobia bacterium LW23 (2) | | | | | | | +--Opitutae (1) | | | | | | | +--Opitutales (1) | | | | | | | +--Opitutaceae (1) | | | | | | | +--Opitutus (1) | | | | | | | +--Opitutus sp. ER46 (1) | | | | | +--Planctomycetota (1) | | | | | | | +--CandidatusBrocadiia (1) | | | | | | | +--CandidatusBrocadiales (1) | | | | | | | +--CandidatusScalinduaceae (1) | | | | | | | +--Candidatus Scalindua japonica (1) | | | | | +--Verrucomicrobia (1) | | | | | +--Opitutae (1) | | | | | +--Opitutales (1) | | | | | +--Opitutaceae (1) | | | | | +--Opitutaceae bacterium TSB47 (1) | | | +--Nitrospirae (6) | | | | | +--Nitrospirales (1) | | | | | | | +--Nitrospiraceae (1) | | | | | | | +--Leptospirillum ferrodiazotrophum (1) | | | | | +--Nitrospira (5) | | | | | +--Nitrospirales (5) | | | | | +--Nitrospiraceae (5) | | | | | +--Leptospirillum (5) | | | | | +--Leptospirillumsp.GroupI (2) | | | | | | | +--Leptospirillum ferrooxidans C2-3 (2) | | | | | +--Leptospirillum sp. Group IV 'UBA BS' (3) | | | +--Actinobacteria (46) | | | | | +--Actinobacteridae (46) | | | | | +--Actinomycetales (46) | | | | | +--Streptomycineae (26) | | | | | | | +--Streptomycetaceae (26) | | | | | | | +--Streptomyces humidus (1) | | | | | | | +--Streptomyces rubellomurinus (1) | | | | | | | +--Streptomyces agglomeratus (2) | | | | | | | +--Kitasatospora setae KM-6054 (1) | | | | | | | +--Streptomyces glaucescens (1) | | | | | | | +--Streptomyces bingchenggensis BCW-1 (2) | | | | | | | +--Streptomyces finlayi (1) | | | | | | | +--Streptomyces olivochromogenes (1) | | | | | | | +--Streptomyces morookaensis (1) | | | | | | | +--Streptomyces chromofuscus (1) | | | | | | | +--Streptomyces echinatus (1) | | | | | | | +--Streptomyces zinciresistens K42 (1) | | | | | | | +--Streptomyces daliensis (1) | | | | | | | +--Streptomyces alanosinicus (1) | | | | | | | +--Streptomyces sp. NL15-2K (1) | | | | | | | +--Streptomyces sp. RV15 (1) | | | | | | | +--Streptomyces aureofaciens (2) | | | | | | | +--Streptomyces termitum (1) | | | | | | | +--Streptomyces griseorubiginosus (1) | | | | | | | +--Streptomyces sp. UTMC1154 (1) | | | | | | | +--Streptomyces brasiliensis (2) | | | | | | | +--Streptomyces cellostaticus (1) | | | | | +--Streptosporangineae (5) | | | | | | | +--Thermomonosporaceae (1) | | | | | | | | | +--Actinomadura latina (1) | | | | | | | +--Nocardiopsaceae (2) | | | | | | | | | +--Nocardiopsis metallicus (1) | | | | | | | | | +--Thermobifida halotolerans (1) | | | | | | | +--Streptosporangiaceae (2) | | | | | | | +--Nonomuraea polychroma (1) | | | | | | | +--Acrocarpospora corrugata (1) | | | | | +--Micrococcineae (1) | | | | | | | +--Intrasporangiaceae (1) | | | | | | | +--Intrasporangium sp. Q5-1 (1) | | | | | +--Pseudonocardineae (6) | | | | | | | +--Actinosynnemataceae (3) | | | | | | | | | +--Actinokineospora terrae (3) | | | | | | | +--Pseudonocardiaceae (3) | | | | | | | +--Crossiella cryophila (2) | | | | | | | +--Pseudonocardia sp. YIM 63101 (1) | | | | | +--Micromonosporineae (7) | | | | | | | +--Micromonosporaceae (6) | | | | | | | | | +--Actinoplanes italicus (1) | | | | | | | | | +--Micromonospora sp. 211018 (1) | | | | | | | | | +--Actinoplanes awajinensis subsp. mycoplanecinus (1) | | | | | | | | | +--Actinoplanes sp. RI50-RCA114 (1) | | | | | | | | | +--Actinoplanes cyaneus (1) | | | | | | | | | +--Actinoplanes derwentensis (1) | | | | | | | +--Phytohabitans suffuscus (1) | | | | | +--Frankineae (1) | | | | | +--Frankiaceae (1) | | | | | +--Frankia symbiont of Datisca glomerata (1) | | | +--Proteobacteria (439) | | | | | +--Olavius sp. associated proteobacterium Delta 1 (9) | | | | | +--Alphaproteobacteria (15) | | | | | | | +--Rhizobiales (4) | | | | | | | | | +--Rhizobiaceae (2) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (1) | | | | | | | | | | | | | +--Rhizobium tibeticum (1) | | | | | | | | | | | +--Sinorhizobium/Ensifergroup (1) | | | | | | | | | | | +--Sinorhizobium terangae (1) | | | | | | | | | +--Methylobacteriaceae (1) | | | | | | | | | | | +--Microvirga vignae (1) | | | | | | | | | +--Phyllobacteriaceae (1) | | | | | | | | | +--Mesorhizobium albiziae (1) | | | | | | | +--Rickettsiales (10) | | | | | | | | | +--Rickettsiaceae (6) | | | | | | | | | | | +--Rickettsieae (6) | | | | | | | | | | | +--Orientia tsutsugamushi str. Boryong (6) | | | | | | | | | +--endosymbiont of Acanthamoeba sp. UWC9 (3) | | | | | | | | | +--Candidatus Midichloria mitochondrii IricVA (1) | | | | | | | +--Sphingomonadales (1) | | | | | | | +--Sphingomonadaceae (1) | | | | | | | +--Sphingomonas (1) | | | | | | | +--Sphingomonas sanxanigenens DSM 19645 = NX02 (1) | | | | | +--gamma proteobacterium DKE (1) | | | | | +--Deltaproteobacteria (132) | | | | | | | +--Desulfuromonadales (3) | | | | | | | | | +--Desulfuromonadaceae (1) | | | | | | | | | | | +--Desulfuromusa kysingii (1) | | | | | | | | | +--Geobacteraceae (2) | | | | | | | | | +--Geobacter uraniireducens Rf4 (1) | | | | | | | | | +--Geoalkalibacter subterraneus (1) | | | | | | | +--Desulfobacterales (128) | | | | | | | | | +--Desulfobacteraceae (128) | | | | | | | | | +--Desulfonema magnum (3) | | | | | | | | | +--Desulfobacula toluolica Tol2 (2) | | | | | | | | | +--Desulfobacter latus (2) | | | | | | | | | +--Desulfonema ishimotonii (11) | | | | | | | | | +--Desulfonema limicola (109) | | | | | | | | | +--Desulfobacterium autotrophicum HRM2 (1) | | | | | | | +--Syntrophobacterales (1) | | | | | | | +--Syntrophobacteraceae (1) | | | | | | | +--Desulforhabdus amnigena (1) | | | | | +--gamma proteobacterium HdN1 (2) | | | | | +--delta/epsilonsubdivisions (43) | | | | | | | +--Deltaproteobacteria (43) | | | | | | | +--Desulfobacterales (43) | | | | | | | +--Desulfobacteraceae (43) | | | | | | | +--Desulfotignum (1) | | | | | | | | | +--Desulfotignum phosphitoxidans DSM 13687 (1) | | | | | | | +--Candidatus Magnetomorum sp. HK-1 (14) | | | | | | | +--CandidatusMagnetoglobus (20) | | | | | | | | | +--Candidatus Magnetoglobus multicellularis str. Araruama (20) | | | | | | | +--Desulfamplus magnetovallimortis (8) | | | | | +--Gammaproteobacteria (136) | | | | | | | +--unclassifiedGammaproteobacteria (3) | | | | | | | | | +--Competibacteraceae (3) | | | | | | | | | +--CandidatusContendobacter (3) | | | | | | | | | +--Candidatus Contendobacter odensis Run_B_J11 (3) | | | | | | | +--Pasteurellales (7) | | | | | | | | | +--Bisgaard Taxon 5 (3) | | | | | | | | | +--Pasteurellaceae (4) | | | | | | | | | +--Actinobacillus muris (1) | | | | | | | | | +--Actinobacillus indolicus (3) | | | | | | | +--Reinekea blandensis MED297 (1) | | | | | | | +--Enterobacterales (3) | | | | | | | | | +--Yersiniaceae (1) | | | | | | | | | | | +--Serratia sp. DD3 (1) | | | | | | | | | +--Morganellaceae (2) | | | | | | | | | +--Xenorhabdus (2) | | | | | | | | | +--Xenorhabdus szentirmaii DSM 16338 (1) | | | | | | | | | +--Xenorhabdus bovienii str. kraussei Quebec (1) | | | | | | | +--Aeromonadales (1) | | | | | | | | | +--Aeromonadaceae (1) | | | | | | | | | +--Aeromonas simiae (1) | | | | | | | +--Orbales (1) | | | | | | | | | +--Orbaceae (1) | | | | | | | | | +--Gilliamella apicola (1) | | | | | | | +--Nevskiales (1) | | | | | | | | | +--Sinobacteraceae (1) | | | | | | | | | +--Hydrocarboniphaga (1) | | | | | | | | | +--Hydrocarboniphaga effusa AP103 (1) | | | | | | | +--Methylococcales (2) | | | | | | | | | +--Methylococcaceae (2) | | | | | | | | | +--Methyloprofundus sedimenti (1) | | | | | | | | | +--Methylomonas denitrificans (1) | | | | | | | +--Alteromonadales (22) | | | | | | | | | +--Colwelliaceae (1) | | | | | | | | | | | +--Colwellia sp. BCw111 (1) | | | | | | | | | +--Shewanellaceae (18) | | | | | | | | | | | +--Shewanella frigidimarina NCIMB 400 (1) | | | | | | | | | | | +--Shewanella sediminis HAW-EB3 (4) | | | | | | | | | | | +--Shewanella pealeana ATCC 700345 (2) | | | | | | | | | | | +--Shewanella spongiae (11) | | | | | | | | | +--Alteromonadaceae (3) | | | | | | | | | +--Paraglaciecola (2) | | | | | | | | | | | +--Paraglaciecola psychrophila 170 (2) | | | | | | | | | +--Bowmanella pacifica (1) | | | | | | | +--Legionellales (17) | | | | | | | | | +--Coxiellaceae (1) | | | | | | | | | | | +--Aquicella lusitana (1) | | | | | | | | | +--Legionellaceae (16) | | | | | | | | | +--Legionella pneumophila subsp. pneumophila str. Philadelphia 1 (2) | | | | | | | | | +--Legionella feeleii (1) | | | | | | | | | +--Legionella drancourtii LLAP12 (4) | | | | | | | | | +--Legionella sp. LegA (3) | | | | | | | | | +--Legionella nautarum (1) | | | | | | | | | +--Legionella israelensis (1) | | | | | | | | | +--Legionella (1) | | | | | | | | | | | +--Legionella oakridgensis ATCC 33761 = DSM 21215 (1) | | | | | | | | | +--Legionella tucsonensis (1) | | | | | | | | | +--Legionella rubrilucens (1) | | | | | | | | | +--Legionella longbeachae NSW150 (1) | | | | | | | +--Vibrionales (21) | | | | | | | | | +--Vibrionaceae (21) | | | | | | | | | +--Photobacterium proteolyticum (1) | | | | | | | | | +--Photobacterium ganghwense (2) | | | | | | | | | +--Vibrio furnissii (1) | | | | | | | | | +--Photobacterium lipolyticum (6) | | | | | | | | | +--Vibrio navarrensis (1) | | | | | | | | | +--Photobacterium profundum SS9 (1) | | | | | | | | | +--Photobacterium sp. Gung47 (2) | | | | | | | | | +--Vibrio (5) | | | | | | | | | | | +--Vibrioharveyigroup (4) | | | | | | | | | | | | | +--Vibrio azureus NBRC 104587 (4) | | | | | | | | | | | +--Vibrio ezurae NBRC 102218 (1) | | | | | | | | | +--Grimontia hollisae CIP 101886 (1) | | | | | | | | | +--Photobacterium aquimaris (1) | | | | | | | +--Xanthomonadales (3) | | | | | | | | | +--Xanthomonadaceae (2) | | | | | | | | | | | +--Arenimonas (1) | | | | | | | | | | | | | +--Arenimonas metalli CF5-1 (1) | | | | | | | | | | | +--Pseudofulvimonas gallinarii (1) | | | | | | | | | +--Pseudomonas boreopolis (1) | | | | | | | +--Enterobacteriales (17) | | | | | | | | | +--Enterobacteriaceae (17) | | | | | | | | | +--Serratia (1) | | | | | | | | | | | +--Serratia symbiotica str. Tucson (1) | | | | | | | | | +--Citrobacter rodentium ICC168 (1) | | | | | | | | | +--Trabulsiella odontotermitis (1) | | | | | | | | | +--Escherichia coli O157:H7 str. Sakai (1) | | | | | | | | | +--Budvicia aquatica (7) | | | | | | | | | +--Shigella boydii CDC 3083-94 (1) | | | | | | | | | +--aphidsecondarysymbionts (5) | | | | | | | | | +--Candidatus Regiella insecticola R5.15 (2) | | | | | | | | | +--Candidatus Regiella insecticola LSR1 (2) | | | | | | | | | +--Hamiltonella endosymbiont of Bemisia tabaci (1) | | | | | | | +--Chromatiales (9) | | | | | | | | | +--Ectothiorhodospiraceae (1) | | | | | | | | | | | +--Nitrococcus mobilis Nb-231 (1) | | | | | | | | | +--Chromatiaceae (8) | | | | | | | | | +--Thiocapsa imhoffii (1) | | | | | | | | | +--Thiorhodovibrio sp. 970 (1) | | | | | | | | | +--Rheinheimera sp. E407-8 (1) | | | | | | | | | +--Thiorhodococcus minor (3) | | | | | | | | | +--Nitrosococcus halophilus Nc4 (1) | | | | | | | | | +--Thiohalocapsa (1) | | | | | | | | | +--uncultured Thiohalocapsa sp. PB-PSB1 (1) | | | | | | | +--Oceanospirillales (6) | | | | | | | | | +--Hahellaceae (1) | | | | | | | | | | | +--Hahella chejuensis KCTC 2396 (1) | | | | | | | | | +--Oceanospirillaceae (4) | | | | | | | | | | | +--Marinobacterium sp. AK27 (1) | | | | | | | | | | | +--Osedax symbiont Rs1 (3) | | | | | | | | | +--Alcanivoracaceae (1) | | | | | | | | | +--Alcanivorax borkumensis SK2 (1) | | | | | | | +--Pseudomonadales (22) | | | | | | | +--Pseudomonadaceae (22) | | | | | | | +--Pseudomonas pachastrellae (2) | | | | | | | +--Pseudomonas corrugata (3) | | | | | | | +--Pseudomonas benzenivorans (1) | | | | | | | +--Pseudomonas fluorescens HK44 (4) | | | | | | | +--Pseudomonas stutzeri A1501 (4) | | | | | | | +--Pseudomonas indica (1) | | | | | | | +--Pseudomonas sp. M47T1 (1) | | | | | | | +--Pseudomonas sp. BAY1663 (1) | | | | | | | +--Pseudomonas (4) | | | | | | | | | +--Pseudomonas taeanensis MS-3 (4) | | | | | | | +--Azomonas macrocytogenes (1) | | | | | +--Magnetococcus sp. MC-1 (3) | | | | | +--Betaproteobacteria (98) | | | | | +--Gallionellales (3) | | | | | | | +--Gallionellaceae (3) | | | | | | | +--Gallionella capsiferriformans ES-2 (1) | | | | | | | +--Candidatus Gallionella acididurans (2) | | | | | +--Burkholderiales (92) | | | | | | | +--Alcaligenaceae bacterium BZ59 (1) | | | | | | | +--Burkholderiaceae (70) | | | | | | | | | +--Ralstonia sp. 5_2_56FAA (1) | | | | | | | | | +--Burkholderia xenovorans LB400 (2) | | | | | | | | | +--Burkholderia sediminicola (1) | | | | | | | | | +--Paraburkholderia ribeironis (2) | | | | | | | | | +--Candidatus Burkholderia kirkii UZHbot1 (1) | | | | | | | | | +--Paraburkholderia ginsengiterrae (1) | | | | | | | | | +--Burkholderia graminis C4D1M (1) | | | | | | | | | +--Burkholderia glathei (2) | | | | | | | | | +--Burkholderia sp. IMER-B1-49 (1) | | | | | | | | | +--Burkholderia sp. OLGA172 (10) | | | | | | | | | +--Burkholderia sp. LMG 22936 (2) | | | | | | | | | +--Burkholderia (1) | | | | | | | | | | | +--Burkholderia singularis (1) | | | | | | | | | +--Burkholderia sp. PO-04-17-38 (2) | | | | | | | | | +--Burkholderia phenazinium (1) | | | | | | | | | +--Burkholderia phymatum STM815 (5) | | | | | | | | | +--Burkholderia sp. JPY461 (2) | | | | | | | | | +--Burkholderia sp. SRS-W-2-2016 (3) | | | | | | | | | +--Cupriavidus sp. USMAA2-4 (2) | | | | | | | | | +--Burkholderia sp. IMER-B1-33 (25) | | | | | | | | | +--Cupriavidus metallidurans CH34 (2) | | | | | | | | | +--Candidatus Burkholderia verschuerenii (3) | | | | | | | +--unclassifiedBurkholderiales (1) | | | | | | | | | +--BurkholderialesGeneraincertaesedis (1) | | | | | | | | | +--Ideonella sakaiensis (1) | | | | | | | +--Comamonadaceae (12) | | | | | | | | | +--Limnohabitans sp. 2KL-17 (1) | | | | | | | | | +--Pelomonas puraquae (1) | | | | | | | | | +--Polaromonas sp. JS666 (4) | | | | | | | | | +--Acidovorax sp. 12322-1 (1) | | | | | | | | | +--Acidovorax delafieldii 2AN (1) | | | | | | | | | +--Comamonas (1) | | | | | | | | | | | +--Comamonas aquatica DA1877 (1) | | | | | | | | | +--Acidovorax sp. Leaf160 (1) | | | | | | | | | +--Acidovorax sp. RAC01 (1) | | | | | | | | | +--Rhodoferax saidenbachensis (1) | | | | | | | +--Oxalobacteraceae (8) | | | | | | | +--Janthinobacterium sp. KBS0711 (1) | | | | | | | +--Massilia (1) | | | | | | | | | +--Massilia timonae CCUG 45783 (1) | | | | | | | +--Undibacterium oligocarboniphilum (1) | | | | | | | +--Herminiimonas arsenicoxydans (1) | | | | | | | +--Noviherbaspirillum sp. Root189 (2) | | | | | | | +--Herbaspirillum sp. TSA66 (2) | | | | | +--Rhodocyclales (2) | | | | | | | +--Rhodocyclaceae (2) | | | | | | | +--Petrobacter sp. JHK30 (1) | | | | | | | +--Thauera (1) | | | | | | | +--Thauera terpenica 58Eu (1) | | | | | +--Nitrosomonadales (1) | | | | | +--Nitrosomonadaceae (1) | | | | | +--Nitrosomonas sp. Nm51 (1) | | | +--Planctomycetes (3) | | | | | +--Planctomycetacia (3) | | | | | +--Planctomycetales (3) | | | | | +--Candidatus Kuenenia stuttgartiensis (2) | | | | | +--Candidatus Brocadia fulgida (1) | | | +--Spirochaetes (1) | | | | | +--Spirochaetales (1) | | | | | +--Spirochaetaceae (1) | | | | | +--Spirochaeta isovalerica (1) | | | +--Firmicutes (47) | | | | | +--Clostridia (37) | | | | | | | +--Thermoanaerobacterales (1) | | | | | | | | | +--ThermoanaerobacteralesFamilyIII.IncertaeSedis (1) | | | | | | | | | +--Syntrophaceticus schinkii (1) | | | | | | | +--Clostridiales bacterium APP2 (1) | | | | | | | +--Clostridiales bacterium BV3C26 (1) | | | | | | | +--butyrate-producing bacterium SM4/1 (1) | | | | | | | +--Halanaerobiales (1) | | | | | | | | | +--Halanaerobiaceae (1) | | | | | | | | | +--Halanaerobium salsuginis (1) | | | | | | | +--Clostridiales (32) | | | | | | | +--Blautia luti (1) | | | | | | | +--Ruminococcaceae (1) | | | | | | | | | +--Bacteroides cellulosolvens ATCC 35603 (1) | | | | | | | +--Anaerovirgula multivorans (1) | | | | | | | +--ClostridialesFamilyXII.IncertaeSedis (2) | | | | | | | | | +--Fusibacter sp. 3-D3-R-P8ASC2010 (2) | | | | | | | +--Lachnospiraceae bacterium A2 (2) | | | | | | | +--Clostridiaceae (11) | | | | | | | | | +--Clostridium pasteurianum BC1 (2) | | | | | | | | | +--Clostridium sp. DL-VIII (1) | | | | | | | | | +--Clostridium puniceum (2) | | | | | | | | | +--Clostridium lavalense (1) | | | | | | | | | +--Alkaliphilus metalliredigens QYMF (5) | | | | | | | +--Lachnospiraceae (1) | | | | | | | | | +--Roseburia hominis A2-183 (1) | | | | | | | +--Blautia wexlerae (1) | | | | | | | +--Pseudoflavonifractor capillosus ATCC 29799 (6) | | | | | | | +--Peptococcaceae (3) | | | | | | | | | +--Desulfotomaculum gibsoniae DSM 7213 (1) | | | | | | | | | +--Desulfosporosinus orientis DSM 765 (1) | | | | | | | | | +--Pelotomaculum schinkii (1) | | | | | | | +--Catabacteriaceae (2) | | | | | | | | | +--Catabacter hongkongensis (2) | | | | | | | +--Eubacteriaceae bacterium ACC19a (1) | | | | | +--Negativicutes (2) | | | | | | | +--Selenomonadales (2) | | | | | | | +--Veillonellaceae (2) | | | | | | | +--Megasphaera paucivorans (1) | | | | | | | +--Pectinatus sp. TY (1) | | | | | +--Lactobacillales (3) | | | | | | | +--Streptococcaceae (2) | | | | | | | | | +--Streptococcus iniae (1) | | | | | | | | | +--Streptococcus pasteurianus ATCC 43144 (1) | | | | | | | +--Aerococcaceae (1) | | | | | | | +--Aerococcus urinae ACS-120-V-Col10a (1) | | | | | +--Bacillales (5) | | | | | +--Alicyclobacillaceae (5) | | | | | +--Alicyclobacillus ferrooxydans (5) | | | +--Chloroflexi (6) | | | | | +--Ktedonobacteria (4) | | | | | | | +--Ktedonobacterales (4) | | | | | | | +--Ktedonobacteraceae (4) | | | | | | | +--Ktedonobacter racemifer DSM 44963 (4) | | | | | +--Kouleothrix aurantiaca (2) | | | +--bacterium 1XD42-8 (1) | | | +--Thermodesulfobacteriota (7) | | | | | +--Desulfobacteria (5) | | | | | | | +--Desulfobacterales (5) | | | | | | | +--Desulfosarcinaceae (5) | | | | | | | +--Desulfosarcina (5) | | | | | | | +--Desulfosarcina ovata subsp. ovata (5) | | | | | +--Desulfobulbia (1) | | | | | | | +--Desulfobulbales (1) | | | | | | | +--Desulfobulbaceae (1) | | | | | | | +--Desulfolithobacter dissulfuricans (1) | | | | | +--Desulfuromonadia (1) | | | | | +--Desulfuromonadales (1) | | | | | +--Desulfuromonadaceae (1) | | | | | +--Desulfuromonas (1) | | | | | +--Desulfuromonas sp. AOP6 (1) | | | +--Nitrospinae/Tectomicrobiagroup (2) | | | | | +--CandidatusTectomicrobia (2) | | | | | +--Candidatus Entotheonella sp. TSY2 (1) | | | | | +--Candidatus Entotheonella sp. TSY1 (1) | | | +--Terrabacteriagroup (170) | | | | | +--Actinobacteria (18) | | | | | | | +--Actinobacteria (12) | | | | | | | | | +--Streptomycetales (10) | | | | | | | | | | | +--Streptomycetaceae (10) | | | | | | | | | | | +--Streptomyces sp. WM4235 (1) | | | | | | | | | | | +--Streptomyces sp. NRRL WC-3618 (1) | | | | | | | | | | | +--Streptomyces sp. NRRL F-5122 (1) | | | | | | | | | | | +--Streptomyces sp. AVP053U2 (1) | | | | | | | | | | | +--Streptomyces sp. DI166 (1) | | | | | | | | | | | +--Streptomyces (5) | | | | | | | | | | | +--Streptomyces ipomoeae 91-03 (5) | | | | | | | | | +--Micromonosporales (1) | | | | | | | | | | | +--Micromonosporaceae (1) | | | | | | | | | | | +--Micromonospora sp. CB01531 (1) | | | | | | | | | +--Pseudonocardiales (1) | | | | | | | | | +--Pseudonocardiaceae (1) | | | | | | | | | +--Alloactinosynnema sp. L-07 (1) | | | | | | | +--Acidimicrobiia (6) | | | | | | | +--Acidimicrobiales (6) | | | | | | | +--Acidimicrobiaceae (6) | | | | | | | +--Acidithrix ferrooxidans (6) | | | | | +--Deinococcota (1) | | | | | | | +--Deinococci (1) | | | | | | | +--Deinococcales (1) | | | | | | | +--Deinococcaceae (1) | | | | | | | +--Deinococcus ruber (1) | | | | | +--Cyanobacteriota/Melainabacteriagroup (5) | | | | | | | +--Cyanobacteriota (5) | | | | | | | +--filamentous cyanobacterium CCP5 (1) | | | | | | | +--Cyanophyceae (4) | | | | | | | +--Leptolyngbyales (2) | | | | | | | | | +--Leptolyngbyaceae (2) | | | | | | | | | +--Leptolyngbyagroup (2) | | | | | | | | | +--Leptolyngbya (2) | | | | | | | | | +--Leptolyngbya sp. FACHB-321 (2) | | | | | | | +--Nostocales (2) | | | | | | | +--Tolypothrichaceae (2) | | | | | | | +--Tolypothrix (2) | | | | | | | +--Tolypothrix sp. NIES-4075 (2) | | | | | +--Armatimonadetes (1) | | | | | | | +--Chthonomonadetes (1) | | | | | | | +--Chthonomonadales (1) | | | | | | | +--Chthonomonadaceae (1) | | | | | | | +--Chthonomonas (1) | | | | | | | +--Chthonomonas calidirosea T49 (1) | | | | | +--Chloroflexota (24) | | | | | | | +--Chloroflexia (1) | | | | | | | | | +--Chloroflexales (1) | | | | | | | | | +--Chloroflexineae (1) | | | | | | | | | +--Oscillochloridaceae (1) | | | | | | | | | +--Candidatus Viridilinea mediisalina (1) | | | | | | | +--Ktedonobacteria (21) | | | | | | | | | +--Ktedonobacteria bacterium brp13 (12) | | | | | | | | | +--Ktedonobacterales (9) | | | | | | | | | +--Ktedonobacteraceae (5) | | | | | | | | | | | +--Ktedonospora formicarum (5) | | | | | | | | | +--Dictyobacteraceae (4) | | | | | | | | | +--Dictyobacter aurantiacus (2) | | | | | | | | | +--Dictyobacter vulcani (2) | | | | | | | +--Anaerolineae (1) | | | | | | | | | +--Anaerolineales (1) | | | | | | | | | +--Anaerolineales bacterium (1) | | | | | | | +--Thermoflexia (1) | | | | | | | +--Thermoflexales (1) | | | | | | | +--Thermoflexales bacterium (1) | | | | | +--Cyanobacteria/Melainabacteriagroup (1) | | | | | | | +--Cyanobacteria (1) | | | | | | | +--Nostocales (1) | | | | | | | +--Rivulariaceae (1) | | | | | | | +--Calothrix (1) | | | | | | | +--Calothrix sp. PCC 6303 (1) | | | | | +--Actinomycetota (55) | | | | | | | +--Actinomycetes (55) | | | | | | | +--Kitasatosporales (34) | | | | | | | | | +--Streptomycetaceae (34) | | | | | | | | | +--Streptomyces buecherae (1) | | | | | | | | | +--Actinacidiphila oryziradicis (4) | | | | | | | | | +--Streptomyces benahoarensis (1) | | | | | | | | | +--Streptomyces inhibens (1) | | | | | | | | | +--Streptomyces fuscichromogenes (1) | | | | | | | | | +--Streptomyces luteolifulvus (1) | | | | | | | | | +--Streptomyces broussonetiae (2) | | | | | | | | | +--Streptomyces (22) | | | | | | | | | | | +--Streptomyces sp. NA04227 (1) | | | | | | | | | | | +--Streptomyces sp. ISL-96 (1) | | | | | | | | | | | +--Streptomyces sp. SID8352 (1) | | | | | | | | | | | +--Streptomyces sp. Act143 (1) | | | | | | | | | | | +--Streptomyces sp. SID625 (1) | | | | | | | | | | | +--Streptomyces sp. TS71-3 (1) | | | | | | | | | | | +--Streptomyces sp. F001 (2) | | | | | | | | | | | +--Streptomyces sp. SDr-06 (1) | | | | | | | | | | | +--Streptomyces sp. SID8354 (2) | | | | | | | | | | | +--Streptomyces sp. TRM68367 (1) | | | | | | | | | | | +--Streptomyces sp. NWU339 (1) | | | | | | | | | | | +--Streptomyces sp. ISL-86 (2) | | | | | | | | | | | +--Streptomyces sp. ISL-94 (1) | | | | | | | | | | | +--Streptomyces naganishii JCM 4654 (1) | | | | | | | | | | | +--Streptomyces sp. CB02959 (1) | | | | | | | | | | | +--Streptomyces sp. PTY087I2 (1) | | | | | | | | | | | +--Streptomyces sp. ADI95-17 (1) | | | | | | | | | | | +--Streptomyces sp. IB201691-2A2 (1) | | | | | | | | | | | +--Streptomyces sp. ISL-10 (1) | | | | | | | | | +--Streptomyces capitiformicae (1) | | | | | | | +--Micromonosporales (5) | | | | | | | | | +--Micromonosporaceae (5) | | | | | | | | | +--Micromonospora (4) | | | | | | | | | | | +--Micromonospora sp. Llam0 (3) | | | | | | | | | | | +--Micromonospora sp. 4G51 (1) | | | | | | | | | +--Micromonospora craniellae (1) | | | | | | | +--Propionibacteriales (1) | | | | | | | | | +--Kribbellaceae (1) | | | | | | | | | +--Kribbella (1) | | | | | | | | | +--Kribbella sp. VKM Ac-2500 (1) | | | | | | | +--Mycobacteriales (1) | | | | | | | | | +--Nocardiaceae (1) | | | | | | | | | +--Nocardia (1) | | | | | | | | | +--Nocardia sp. SYP-A9097 (1) | | | | | | | +--Frankiales (1) | | | | | | | | | +--Frankiaceae (1) | | | | | | | | | +--Frankia canadensis (1) | | | | | | | +--Pseudonocardiales (4) | | | | | | | | | +--Pseudonocardiaceae (4) | | | | | | | | | +--Saccharopolyspora elongata (3) | | | | | | | | | +--Lentzea tibetensis (1) | | | | | | | +--Streptosporangiales (7) | | | | | | | | | +--Thermomonosporaceae (2) | | | | | | | | | | | +--Actinomadura darangshiensis (1) | | | | | | | | | | | +--Actinomadura harenae (1) | | | | | | | | | +--Streptosporangiaceae (5) | | | | | | | | | +--Streptosporangiaceae bacterium NEAU-GS5 (2) | | | | | | | | | +--Nonomuraea (1) | | | | | | | | | | | +--Nonomuraea sp. WAC 01424 (1) | | | | | | | | | +--Sinosporangium siamense (1) | | | | | | | | | +--Nonomuraea cypriaca (1) | | | | | | | +--Micrococcales (2) | | | | | | | +--Micrococcaceae (1) | | | | | | | | | +--Arthrobacter (1) | | | | | | | | | +--Arthrobacter sp. PAMC25564 (1) | | | | | | | +--Dermacoccaceae (1) | | | | | | | +--Flexivirga oryzae (1) | | | | | +--Firmicutes (20) | | | | | | | +--Clostridia (17) | | | | | | | | | +--Halanaerobiales (5) | | | | | | | | | | | +--Halobacteroidaceae (5) | | | | | | | | | | | +--Orenia metallireducens (5) | | | | | | | | | +--Clostridiales (12) | | | | | | | | | +--Ruminococcaceae (1) | | | | | | | | | | | +--Anaerotruncus sp. G3(2012) (1) | | | | | | | | | +--Lachnospiraceae (8) | | | | | | | | | | | +--Lachnospiraceae bacterium 3-2 (3) | | | | | | | | | | | +--Lachnospiraceae bacterium COE1 (1) | | | | | | | | | | | +--Hespellia (1) | | | | | | | | | | | | | +--Hespellia stercorisuis DSM 15480 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium M18-1 (3) | | | | | | | | | +--Clostridiaceae (1) | | | | | | | | | | | +--Clostridium (1) | | | | | | | | | | | +--Clostridium saccharobutylicum DSM 13864 (1) | | | | | | | | | +--Eubacteriaceae (2) | | | | | | | | | +--Eubacterium (1) | | | | | | | | | | | +--Eubacterium plexicaudatum ASF492 (1) | | | | | | | | | +--Acetobacterium (1) | | | | | | | | | +--Acetobacterium woodii DSM 1030 (1) | | | | | | | +--Bacilli (1) | | | | | | | | | +--Bacillales (1) | | | | | | | | | +--Paenibacillaceae (1) | | | | | | | | | +--Paenibacillus ferrarius (1) | | | | | | | +--Tissierellia (2) | | | | | | | +--Tissierellales (1) | | | | | | | | | +--Tissierellaceae (1) | | | | | | | | | +--Tissierella (1) | | | | | | | | | +--Tissierella creatinophila DSM 6911 (1) | | | | | | | +--unclassifiedTissierellia (1) | | | | | | | +--[Clostridium] ultunense Esp (1) | | | | | +--Bacillota (45) | | | | | +--Firmicutes bacterium AF12-30 (1) | | | | | +--Clostridia (25) | | | | | | | +--Eubacteriales (17) | | | | | | | | | +--Acutalibacteraceae (4) | | | | | | | | | | | +--Acutalibacter (1) | | | | | | | | | | | | | +--Acutalibacter sp. 1XD8-33 (1) | | | | | | | | | | | +--Caproicibacter fermentans (3) | | | | | | | | | +--Eubacterialesincertaesedis (2) | | | | | | | | | | | +--ClostridialesFamilyXVII.IncertaeSedis (1) | | | | | | | | | | | | | +--Sulfobacillus (1) | | | | | | | | | | | | | +--Sulfobacillus sp. hq2 (1) | | | | | | | | | | | +--EubacterialesFamilyXIII.IncertaeSedis (1) | | | | | | | | | | | +--Sinanaerobacter chloroacetimidivorans (1) | | | | | | | | | +--Oscillospiraceae (2) | | | | | | | | | | | +--Neglectibacter (1) | | | | | | | | | | | | | +--Neglectibacter sp. 59 (1) | | | | | | | | | | | +--Ruminococcus (1) | | | | | | | | | | | +--Ruminococcus sp. AM42-11 (1) | | | | | | | | | +--Peptococcaceae (6) | | | | | | | | | | | +--Peptococcaceae bacterium (5) | | | | | | | | | | | +--Desulforamulus aquiferis (1) | | | | | | | | | +--Desulfitobacteriaceae (1) | | | | | | | | | | | +--Desulfosporosinus (1) | | | | | | | | | | | +--Desulfosporosinus sp. BG (1) | | | | | | | | | +--Clostridiaceae (2) | | | | | | | | | +--Clostridiaceae bacterium AF18-31LB (1) | | | | | | | | | +--Oceanirhabdus seepicola (1) | | | | | | | +--Halanaerobiales (1) | | | | | | | | | +--Halanaerobiaceae (1) | | | | | | | | | +--Iocasia fonsfrigidae (1) | | | | | | | +--Lachnospirales (7) | | | | | | | +--Lachnospiraceae (5) | | | | | | | | | +--Lachnospiraceae bacterium KM106-2 (1) | | | | | | | | | +--Blautia liquoris (1) | | | | | | | | | +--Coprococcus (1) | | | | | | | | | | | +--Coprococcus sp. AF21-14LB (1) | | | | | | | | | +--Blautia argi (1) | | | | | | | | | +--Sporofaciens musculi (1) | | | | | | | +--Vallitaleaceae (2) | | | | | | | +--Petrocella atlantisensis (2) | | | | | +--Bacilli (18) | | | | | | | +--Lactobacillales (1) | | | | | | | | | +--Aerococcaceae (1) | | | | | | | | | +--Facklamia (1) | | | | | | | | | +--Facklamia sp. 252 (1) | | | | | | | +--Bacillales (17) | | | | | | | +--Paenibacillaceae (1) | | | | | | | | | +--Paenibacillus (1) | | | | | | | | | +--Paenibacillus sp. GP183 (1) | | | | | | | +--Alicyclobacillaceae (8) | | | | | | | | | +--Alicyclobacillaceae bacterium I2511 (1) | | | | | | | | | +--Alicyclobacillus (4) | | | | | | | | | | | +--Alicyclobacillus sp. SO9 (4) | | | | | | | | | +--Alicyclobacillus mengziensis (2) | | | | | | | | | +--Kyrpidia spormannii (1) | | | | | | | +--Thermoactinomycetaceae (8) | | | | | | | +--Paenactinomyces guangxiensis (2) | | | | | | | +--Shimazuella alba (1) | | | | | | | +--Marinithermofilum abyssi (5) | | | | | +--Erysipelotrichia (1) | | | | | +--Erysipelotrichales (1) | | | | | +--Erysipelotrichaceae (1) | | | | | +--[Eubacterium] hominis (1) | | | +--Chlorobi (7) | | | | | +--Chlorobia (7) | | | | | +--Chlorobiales (7) | | | | | +--Chlorobiaceae (7) | | | | | +--Chlorobium/Pelodictyongroup (4) | | | | | | | +--Chlorobium luteolum DSM 273 (3) | | | | | | | +--Pelodictyon phaeoclathratiforme BU-1 (1) | | | | | +--Prosthecochloris aestuarii DSM 271 (3) | | | +--FCBgroup (67) | | | +--Bacteroidetes/Chlorobigroup (28) | | | | | +--Bacteroidetes (28) | | | | | +--Sphingobacteriia (1) | | | | | | | +--Sphingobacteriales (1) | | | | | | | +--Sphingobacteriaceae (1) | | | | | | | +--Sphingobacterium deserti (1) | | | | | +--Bacteroidia (20) | | | | | | | +--Bacteroidales (20) | | | | | | | +--Rikenellaceae (3) | | | | | | | | | +--Alistipes sp. An66 (1) | | | | | | | | | +--Mucinivorans hirudinis (2) | | | | | | | +--Porphyromonadaceae (1) | | | | | | | | | +--Porphyromonas sp. COT-108 OH1349 (1) | | | | | | | +--Bacteroidaceae (12) | | | | | | | | | +--Bacteroides caecimuris (4) | | | | | | | | | +--Bacteroides (8) | | | | | | | | | +--Bacteroides sp. CAG:754 (2) | | | | | | | | | +--Bacteroides reticulotermitis JCM 10512 (1) | | | | | | | | | +--Bacteroides nordii CL02T12C05 (1) | | | | | | | | | +--Bacteroides uniformis dnLKV2 (4) | | | | | | | +--Prevotellaceae (4) | | | | | | | +--Alloprevotella (1) | | | | | | | | | +--Prevotella sp. oral taxon 473 str. F0040 (1) | | | | | | | +--Prevotella (3) | | | | | | | +--Prevotella bivia DSM 20514 (2) | | | | | | | +--Prevotella pleuritidis F0068 (1) | | | | | +--Flavobacteriia (2) | | | | | | | +--Flavobacteriales (2) | | | | | | | +--Flavobacteriaceae (2) | | | | | | | +--Flavobacterium akiainvivens (2) | | | | | +--Cytophagia (5) | | | | | +--Cytophagales (5) | | | | | +--Cytophagaceae (2) | | | | | | | +--Fibrella (1) | | | | | | | | | +--Fibrella aestuarina BUZ 2 (1) | | | | | | | +--Fibrisoma (1) | | | | | | | +--Fibrisoma limi BUZ 3 (1) | | | | | +--Cyclobacteriaceae (3) | | | | | +--Lunatimonas lonarensis (3) | | | +--Bacteroidota/Chlorobiotagroup (39) | | | +--Chlorobiota (1) | | | | | +--Chlorobiia (1) | | | | | +--Chlorobiales (1) | | | | | +--Chlorobiaceae (1) | | | | | +--Chlorobium/Pelodictyongroup (1) | | | | | +--Chlorobium (1) | | | | | +--Chlorobium sp. (1) | | | +--Bacteroidota (38) | | | +--Chitinophagia (1) | | | | | +--Chitinophagales (1) | | | | | +--Chitinophagaceae (1) | | | | | +--Chitinophaga (1) | | | | | +--[Flexibacter] sp. ATCC 35208 (1) | | | +--Sphingobacteriia (5) | | | | | +--Sphingobacteriales (5) | | | | | +--Sphingobacteriaceae (5) | | | | | +--Pedobacter (3) | | | | | | | +--Pedobacter sp. Leaf216 (3) | | | | | +--Mucilaginibacter gotjawali (2) | | | +--Bacteroidia (28) | | | | | +--Bacteroidales (23) | | | | | | | +--Dysgonomonadaceae (1) | | | | | | | | | +--Dysgonomonas (1) | | | | | | | | | +--Dysgonomonas sp. PF1-16 (1) | | | | | | | +--Bacteroidaceae (4) | | | | | | | | | +--Bacteroidaceae bacterium (1) | | | | | | | | | +--Bacteroidaceae bacterium HV4-6-C5C (1) | | | | | | | | | +--Bacteroides (2) | | | | | | | | | +--Bacteroides sp. OM08-11 (1) | | | | | | | | | +--Bacteroides sp. OF04-15BH (1) | | | | | | | +--Tannerellaceae (7) | | | | | | | | | +--Parabacteroides (7) | | | | | | | | | +--Parabacteroides gordonii MS-1 = DSM 23371 (1) | | | | | | | | | +--Parabacteroides johnsonii CL02T12C29 (2) | | | | | | | | | +--Parabacteroides sp. AF48-14 (4) | | | | | | | +--Prevotellaceae (7) | | | | | | | | | +--Alloprevotella (1) | | | | | | | | | | | +--Alloprevotella sp. Lung230 (1) | | | | | | | | | +--Prevotella brunnea (1) | | | | | | | | | +--Prevotella (5) | | | | | | | | | +--Prevotella sp. P5-92 (4) | | | | | | | | | +--Prevotella sp. TF12-30 (1) | | | | | | | +--Muribaculaceae (4) | | | | | | | +--Muribaculaceae bacterium Isolate-080 (Janvier) (1) | | | | | | | +--Muribaculaceae bacterium Isolate-002 (NCI) (1) | | | | | | | +--Duncaniella freteri (1) | | | | | | | +--Muribaculaceae bacterium (1) | | | | | +--Marinilabiliales (5) | | | | | +--Prolixibacteraceae (1) | | | | | | | +--Maribellus comscasis (1) | | | | | +--Marinilabiliaceae (4) | | | | | +--Marinilabilia rubra (3) | | | | | +--Alkaliflexus (1) | | | | | +--Alkaliflexus sp. Ai-910 (1) | | | +--Flavobacteriia (1) | | | | | +--Flavobacteriales (1) | | | | | +--Flavobacteriales bacterium (1) | | | +--Cytophagia (3) | | | +--Cytophagales (3) | | | +--Amoebophilaceae (2) | | | | | +--Cardinium (2) | | | | | +--Cardinium endosymbiont of Dermatophagoides farinae (2) | | | +--Spirosomataceae (1) | | | +--Dyadobacter (1) | | | +--Dyadobacter sp. CECT 9275 (1) | +--Viruses (1) | | | +--dsDNAviruses,noRNAstage (1) | | | +--Caudovirales (1) | | | +--Myoviridae (1) | | | +--Pseudomonas phage phi3 (1) | +--Archaea (36) | +--Euryarchaeota (36) | +--Methanomicrobia (31) | | | +--Methanomicrobiales (13) | | | | | +--Methanospirillaceae (9) | | | | | | | +--Methanospirillum lacunae (1) | | | | | | | +--Methanospirillum hungatei JF-1 (8) | | | | | +--Methanomicrobiaceae (4) | | | | | +--Methanoculleus sp. MAB1 (2) | | | | | +--Methanogenium marinum (1) | | | | | +--Methanoculleus (1) | | | | | +--Methanoculleus bourgensis MS2 (1) | | | +--Methanosarcinales (18) | | | +--Methanosarcinaceae (15) | | | | | +--Methanosarcina sp. MTP4 (1) | | | | | +--Methanomethylovorans (1) | | | | | | | +--Methanomethylovorans hollandica DSM 15978 (1) | | | | | +--Methanosarcina acetivorans C2A (13) | | | +--CandidatusMethanoperedenaceae (3) | | | +--Candidatus Methanoperedens nitroreducens (3) | +--Thermoplasmata (1) | | | +--methanogenic archaeon ISO4-H5 (1) | +--Stenosarchaeagroup (4) | +--Methanomicrobia (4) | +--Methanosarcinales (4) | +--Methanosarcinalesincertaesedis (1) | | | +--ANME-2cluster (1) | | | +--ANME-2 cluster archaeon (1) | +--CandidatusMethanoperedenaceae (3) | +--Methanoperedens (3) | +--Candidatus Methanoperedens sp. (3)