# Species tree for RF02004 # Generated from Rfam version 15.00 | +--Eukaryota (6) | | | +--Metazoa (2) | | | | | +--Nematoda (1) | | | | | | | +--Chromadorea (1) | | | | | | | +--Rhabditida (1) | | | | | | | +--Rhabditoidea (1) | | | | | | | +--Rhabditidae (1) | | | | | | | +--Mesorhabditinae (1) | | | | | | | +--Mesorhabditis spiculigera (1) | | | | | +--Chordata (1) | | | | | +--Craniata (1) | | | | | +--Vertebrata (1) | | | | | +--Euteleostomi (1) | | | | | +--Mammalia (1) | | | | | +--Monotremata (1) | | | | | +--Ornithorhynchidae (1) | | | | | +--Ornithorhynchus anatinus (platypus) (1) | | | +--Viridiplantae (4) | | | +--Streptophyta (4) | | | +--Embryophyta (4) | | | +--Tracheophyta (4) | | | +--Spermatophyta (4) | | | +--Magnoliophyta (4) | | | +--Liliopsida (2) | | | | | +--Poales (2) | | | | | +--Poaceae (2) | | | | | +--BEPclade (2) | | | | | +--Ehrhartoideae (2) | | | | | +--Oryzeae (2) | | | | | +--Oryza granulata (2) | | | +--eudicotyledons (2) | | | +--coreeudicotyledons (2) | | | +--rosids (2) | | | +--malvids (2) | | | +--Brassicales (2) | | | +--Brassicaceae (2) | | | +--Brassiceae (2) | | | +--Brassica carinata (2) | +--swine manure bacterium RT-10B (1) | +--Bacteria (713) | | | +--bacterium 1xD8-6 (2) | | | +--Actinobacteria (1) | | | | | +--Actinobacteridae (1) | | | | | +--Actinomycetales (1) | | | | | +--Corynebacterineae (1) | | | | | +--Corynebacteriaceae (1) | | | | | +--Corynebacterium glutamicum ATCC 13032 (1) | | | +--Proteobacteria (3) | | | | | +--Alphaproteobacteria (1) | | | | | | | +--Rhizobiales (1) | | | | | | | +--Hyphomicrobiaceae (1) | | | | | | | +--Gemmiger formicilis (1) | | | | | +--Deltaproteobacteria (2) | | | | | +--Desulfovibrionales (2) | | | | | +--Desulfovibrionaceae (2) | | | | | +--Desulfovibrio profundus (1) | | | | | +--Bilophila wadsworthia 3_1_6 (1) | | | +--bacterium 1XD21-70 (1) | | | +--Campylobacterota (1) | | | | | +--Epsilonproteobacteria (1) | | | | | +--Campylobacterales (1) | | | | | +--Helicobacteraceae (1) | | | | | +--Helicobacter (1) | | | | | +--Helicobacter sp. MIT 99-10781 (1) | | | +--Fusobacteriota (5) | | | | | +--Fusobacteriia (5) | | | | | +--Fusobacteriales (5) | | | | | +--Fusobacteriaceae (5) | | | | | +--Cetobacterium (3) | | | | | | | +--Cetobacterium sp. 2A (3) | | | | | +--Psychrilyobacter (2) | | | | | +--Psychrilyobacter sp. S5 (2) | | | +--Firmicutes (281) | | | | | +--Clostridia (107) | | | | | | | +--Clostridiales bacterium BV3C26 (1) | | | | | | | +--Halanaerobiales (2) | | | | | | | | | +--Halanaerobiaceae (1) | | | | | | | | | | | +--Halanaerobium salsuginis (1) | | | | | | | | | +--Halobacteroidaceae (1) | | | | | | | | | +--Halanaerobacter sp. CEJFG43 (1) | | | | | | | +--Clostridiales (104) | | | | | | | +--Lachnospiraceae bacterium ACC2 (3) | | | | | | | +--Clostridiaceae bacterium SN021 (1) | | | | | | | +--Lachnospiraceae bacterium 9_1_43BFAA (1) | | | | | | | +--Peptostreptococcaceae (1) | | | | | | | | | +--Peptostreptococcus sp. D1 (1) | | | | | | | +--Eubacteriaceae (10) | | | | | | | | | +--Eubacterium angustum (1) | | | | | | | | | +--Eubacterium tarantellae (8) | | | | | | | | | +--Eubacterium uniforme (1) | | | | | | | +--Lachnospiraceae (2) | | | | | | | | | +--Catonella morbi ATCC 51271 (1) | | | | | | | | | +--Johnsonella ignava ATCC 51276 (1) | | | | | | | +--Blautia wexlerae (1) | | | | | | | +--Clostridiaceae bacterium JC13 (1) | | | | | | | +--Ruminococcaceae (10) | | | | | | | | | +--Faecalibacterium prausnitzii A2-165 (2) | | | | | | | | | +--Ruminococcus sp. 18P13 (1) | | | | | | | | | +--Bacteroides cellulosolvens ATCC 35603 (1) | | | | | | | | | +--Ruminococcus obeum (1) | | | | | | | | | +--Acetivibrio ethanolgignens (1) | | | | | | | | | +--Ruminococcus torques (2) | | | | | | | | | +--Subdoligranulum variabile DSM 15176 (2) | | | | | | | +--ClostridialesFamilyXI.IncertaeSedis (2) | | | | | | | | | +--Anaerococcus lactolyticus ATCC 51172 (1) | | | | | | | | | +--Peptoniphilus harei ACS-146-V-Sch2b (1) | | | | | | | +--Clostridiaceae bacterium FH042 (1) | | | | | | | +--Lachnospiraceae bacterium A2 (4) | | | | | | | +--ClostridialesFamilyXIII.IncertaeSedis (3) | | | | | | | | | +--Mogibacterium sp. CM50 (3) | | | | | | | +--Lachnospiraceae bacterium 3-1 (2) | | | | | | | +--Lachnospiraceae bacterium 1_4_56FAA (1) | | | | | | | +--Clostridiaceae (36) | | | | | | | | | +--Clostridium vincentii (1) | | | | | | | | | +--Clostridium aceticum (2) | | | | | | | | | +--Clostridium ljungdahlii (2) | | | | | | | | | +--Clostridium estertheticum subsp. estertheticum (1) | | | | | | | | | +--Clostridium kluyveri DSM 555 (1) | | | | | | | | | +--Clostridium bolteae ATCC BAA-613 (2) | | | | | | | | | +--Clostridium neonatale (3) | | | | | | | | | +--Clostridium butyricum E4 str. BoNT E BL5262 (1) | | | | | | | | | +--Clostridium sp. D5 (5) | | | | | | | | | +--Clostridium sp. DL-VIII (2) | | | | | | | | | +--Clostridium puniceum (3) | | | | | | | | | +--Clostridium cellulolyticum H10 (2) | | | | | | | | | +--Clostridium aciditolerans (1) | | | | | | | | | +--Clostridium cellulovorans 743B (1) | | | | | | | | | +--Clostridium lavalense (1) | | | | | | | | | +--Clostridium hathewayi WAL-18680 (1) | | | | | | | | | +--Clostridium putrefaciens (1) | | | | | | | | | +--Clostridium difficile (1) | | | | | | | | | +--Clostridium sp. BS-1 (1) | | | | | | | | | +--Clostridium symbiosum WAL-14163 (1) | | | | | | | | | +--Clostridium neopropionicum (3) | | | | | | | +--Christensenellaceae (1) | | | | | | | | | +--Christensenella minuta (1) | | | | | | | +--Pseudoflavonifractor capillosus ATCC 29799 (8) | | | | | | | +--Peptococcaceae (7) | | | | | | | | | +--Desulfitobacterium (2) | | | | | | | | | | | +--Desulfitobacterium sp. enrichment culture clone CEB3 (2) | | | | | | | | | +--Desulfotomaculum gibsoniae DSM 7213 (1) | | | | | | | | | +--Peptococcus niger (3) | | | | | | | | | +--Pelotomaculum schinkii (1) | | | | | | | +--Catabacteriaceae (1) | | | | | | | | | +--Catabacter hongkongensis (1) | | | | | | | +--Lachnospiraceae oral taxon 107 str. F0167 (2) | | | | | | | +--Lachnospiraceae bacterium 28-4 (2) | | | | | | | +--Lachnospiraceae bacterium A4 (4) | | | | | +--Negativicutes (4) | | | | | | | +--Selenomonadales (4) | | | | | | | +--Acidaminococcaceae (1) | | | | | | | | | +--Phascolarctobacterium sp. YIT 12067 (1) | | | | | | | +--Veillonellaceae (3) | | | | | | | +--Anaerospora hongkongensis (1) | | | | | | | +--Sporomusa malonica (1) | | | | | | | +--Sporomusa sp. An4 (1) | | | | | +--Lactobacillales (11) | | | | | | | +--Streptococcaceae (1) | | | | | | | | | +--Streptococcus hyointestinalis (1) | | | | | | | +--Carnobacteriaceae (4) | | | | | | | | | +--Carnobacteriaceae bacterium C01 (2) | | | | | | | | | +--Carnobacterium sp. 17-4 (1) | | | | | | | | | +--Desemzia incerta (1) | | | | | | | +--Enterococcaceae (5) | | | | | | | | | +--Enterococcus italicus DSM 15952 (1) | | | | | | | | | +--Pilibacter termitis (1) | | | | | | | | | +--Enterococcus faecalis V583 (2) | | | | | | | | | +--Vagococcus sp. AC-1 (1) | | | | | | | +--Lactobacillaceae (1) | | | | | | | +--Lactobacillus backi (1) | | | | | +--Bacillales (157) | | | | | | | +--Geomicrobium halophilum (1) | | | | | | | +--Planococcaceae (10) | | | | | | | | | +--Jeotgalibacillus campisalis (1) | | | | | | | | | +--Filibacter limicola (2) | | | | | | | | | +--Sporosarcina sp. N-05 (2) | | | | | | | | | +--Sporosarcina pasteurii (2) | | | | | | | | | +--Kurthia sibirica (1) | | | | | | | | | +--Sporosarcina luteola (1) | | | | | | | | | +--Caryophanon tenue (1) | | | | | | | +--Paenibacillaceae (10) | | | | | | | | | +--Paenibacillus polymyxa SC2 (1) | | | | | | | | | +--Brevibacillus sp. WF146 (1) | | | | | | | | | +--Paenibacillus pectinilyticus (1) | | | | | | | | | +--Paenibacillus donghaensis (3) | | | | | | | | | +--Paenibacillus sp. HGF7 (1) | | | | | | | | | +--Paenibacillus validus (1) | | | | | | | | | +--Paenibacillus phyllosphaerae (1) | | | | | | | | | +--Aneurinibacillusgroup (1) | | | | | | | | | +--Aneurinibacillus danicus (1) | | | | | | | +--Bacillaceae (132) | | | | | | | | | +--Geobacillus kaustophilus HTA426 (1) | | | | | | | | | +--Bacillus taeanensis (1) | | | | | | | | | +--Bacillus asahii (7) | | | | | | | | | +--Bacillus krulwichiae (1) | | | | | | | | | +--Bacillus sp. B48(2010) (1) | | | | | | | | | +--Bacillus nealsonii (4) | | | | | | | | | +--Virgibacillus koreensis (1) | | | | | | | | | +--Bacillus insolitus (4) | | | | | | | | | +--Bacillus cohnii (2) | | | | | | | | | +--Bacillus arseniciselenatis (2) | | | | | | | | | +--Bacillus pseudofirmus OF4 (4) | | | | | | | | | +--Bacillus sp. 1NLA3E (7) | | | | | | | | | +--Bacillus pseudomycoides (3) | | | | | | | | | +--Halobacillus karajensis (13) | | | | | | | | | +--Bacillus sp. NCCP-36 (2) | | | | | | | | | +--Paraliobacillus quinghaiensis (3) | | | | | | | | | +--Virgibacillus sp. B6B(2010) (1) | | | | | | | | | +--Bacillus alkalidiazotrophicus (2) | | | | | | | | | +--Oceanobacillus oncorhynchi (1) | | | | | | | | | +--Bacillus endophyticus (1) | | | | | | | | | +--Filobacillus milosensis (2) | | | | | | | | | +--Lentibacillus salicampi (11) | | | | | | | | | +--Bacillus benzoevorans (3) | | | | | | | | | +--Bacillus megaterium QM B1551 (1) | | | | | | | | | +--Bacillus neizhouensis (7) | | | | | | | | | +--Bacillus schlegelii (3) | | | | | | | | | +--Lentibacillus kapialis (4) | | | | | | | | | +--Bacillus sp. BL4-6 (2) | | | | | | | | | +--Bacillus cellulosilyticus DSM 2522 (1) | | | | | | | | | +--Bacillus okhensis (3) | | | | | | | | | +--Bacillus psychrotolerans (1) | | | | | | | | | +--Halobacillus halophilus DSM 2266 (5) | | | | | | | | | +--Bacillus circulans (6) | | | | | | | | | +--Halolactibacillus sp. H96B60 (2) | | | | | | | | | +--Bacillus (1) | | | | | | | | | | | +--Bacillus anthracis (1) | | | | | | | | | +--Virgibacillus salarius (2) | | | | | | | | | +--Bacillus horneckiae (1) | | | | | | | | | +--Bacillus salarius (1) | | | | | | | | | +--Anoxybacillus amylolyticus (1) | | | | | | | | | +--Bacillus sp. P4B(2010) (7) | | | | | | | | | +--Bacillus sp. HS-136 (2) | | | | | | | | | +--Virgibacillus necropolis (2) | | | | | | | | | +--Ornithinibacillus sp. J8B(2010) (2) | | | | | | | | | +--Virgibacillus salinus (1) | | | | | | | +--Sporolactobacillaceae (3) | | | | | | | | | +--Scopulibacillus darangshiensis (3) | | | | | | | +--Thermoactinomycetaceae (1) | | | | | | | +--Seinonella peptonophila (1) | | | | | +--Erysipelotrichi (2) | | | | | +--Erysipelotrichales (2) | | | | | +--Erysipelotrichaceae (1) | | | | | | | +--Turicibacter sp. HGF1 (1) | | | | | +--Erysipelotrichaceae bacterium 5_2_54FAA (1) | | | +--bacterium 1XD42-8 (1) | | | +--bacterium 1xD42-67 (1) | | | +--Fusobacteria (4) | | | | | +--Fusobacteriia (4) | | | | | +--Fusobacteriales (4) | | | | | +--Fusobacteriaceae (4) | | | | | +--Cetobacterium (4) | | | | | +--Cetobacterium somerae ATCC BAA-474 (4) | | | +--Terrabacteriagroup (412) | | | | | +--Firmicutes (152) | | | | | | | +--Clostridia (88) | | | | | | | | | +--Thermoanaerobacterales (1) | | | | | | | | | | | +--Thermoanaerobacteraceae (1) | | | | | | | | | | | +--Caldanaerobius (1) | | | | | | | | | | | +--Caldanaerobius fijiensis DSM 17918 (1) | | | | | | | | | +--Halanaerobiales (4) | | | | | | | | | | | +--Halobacteroidaceae (4) | | | | | | | | | | | +--Halobacteroides (4) | | | | | | | | | | | +--Halobacteroides halobius DSM 5150 (4) | | | | | | | | | +--Clostridiales (83) | | | | | | | | | +--Ruminococcaceae (6) | | | | | | | | | | | +--Ruminiclostridium (1) | | | | | | | | | | | | | +--[Clostridium] termitidis CT1112 (1) | | | | | | | | | | | +--Anaerotruncus sp. G3(2012) (2) | | | | | | | | | | | +--Ruminococcus (3) | | | | | | | | | | | +--Ruminococcus sp. CAG:330 (1) | | | | | | | | | | | +--Ruminococcus flavefaciens 007c (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:624 (1) | | | | | | | | | +--Peptostreptococcaceae (1) | | | | | | | | | | | +--unclassifiedPeptostreptococcaceae (1) | | | | | | | | | | | +--Peptostreptococcaceae bacterium oral taxon 113 str. W5053 (1) | | | | | | | | | +--Eubacteriaceae (8) | | | | | | | | | | | +--Eubacterium (8) | | | | | | | | | | | +--Eubacterium sp. CAG:841 (1) | | | | | | | | | | | +--Eubacterium plexicaudatum ASF492 (6) | | | | | | | | | | | +--Eubacterium sp. CAG:161 (1) | | | | | | | | | +--Clostridiaceae (21) | | | | | | | | | | | +--Clostridium sp. BL8 (7) | | | | | | | | | | | +--Clostridium sp. C105KSO13 (3) | | | | | | | | | | | +--Clostridium (8) | | | | | | | | | | | | | +--Clostridium acetireducens DSM 10703 (1) | | | | | | | | | | | | | +--Clostridium sp. CAG:265 (2) | | | | | | | | | | | | | +--Clostridium tepidiprofundi DSM 19306 (1) | | | | | | | | | | | | | +--Clostridium grantii DSM 8605 (1) | | | | | | | | | | | | | +--Clostridium magnum DSM 2767 (2) | | | | | | | | | | | | | +--Clostridium argentinense CDC 2741 (1) | | | | | | | | | | | +--Clostridium oryzae (2) | | | | | | | | | | | +--Clostridium sp. FS41 (1) | | | | | | | | | +--Clostridialesincertaesedis (1) | | | | | | | | | | | +--ClostridialesFamilyXIII.IncertaeSedis (1) | | | | | | | | | | | +--Eubacterium nodatum ATCC 33099 (1) | | | | | | | | | +--Lachnospiraceae (12) | | | | | | | | | | | +--Blautia sp. An46 (1) | | | | | | | | | | | +--Blautia sp. YL58 (4) | | | | | | | | | | | +--Lachnospiraceae bacterium M18-1 (2) | | | | | | | | | | | +--Anaerobium acetethylicum (1) | | | | | | | | | | | +--Lachnoclostridium sp. An118 (1) | | | | | | | | | | | +--Lachnobacterium (1) | | | | | | | | | | | | | +--Lachnobacterium bovis DSM 14045 (1) | | | | | | | | | | | +--Hespellia (1) | | | | | | | | | | | | | +--Hespellia stercorisuis DSM 15480 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium TWA4 (1) | | | | | | | | | +--unclassifiedClostridiales (25) | | | | | | | | | | | +--Epulopiscium sp. SCG-B10WGA-EpuloB (4) | | | | | | | | | | | +--Epulopiscium sp. Nele67-Bin004 (1) | | | | | | | | | | | +--Epulopiscium sp. SCG-C07WGA-EpuloA2 (2) | | | | | | | | | | | +--unclassifiedClostridiales(miscellaneous) (1) | | | | | | | | | | | | | +--Clostridiales bacterium oral taxon 876 str. F0540 (1) | | | | | | | | | | | +--Epulopiscium sp. AS2M-Bin001 (14) | | | | | | | | | | | +--Epulopiscium sp. Nele67-Bin005 (1) | | | | | | | | | | | +--Epulopiscium sp. Nuni2H_MBin001 (2) | | | | | | | | | +--Peptococcaceae (7) | | | | | | | | | | | +--Desulfosporosinus sp. OL (7) | | | | | | | | | +--Oscillospiraceae (2) | | | | | | | | | +--Oscillibacter sp. 1-3 (2) | | | | | | | +--Bacilli (53) | | | | | | | | | +--Lactobacillales (7) | | | | | | | | | | | +--Streptococcaceae (1) | | | | | | | | | | | | | +--Streptococcus varani (1) | | | | | | | | | | | +--Enterococcaceae (5) | | | | | | | | | | | | | +--Enterococcus (5) | | | | | | | | | | | | | +--Enterococcussaccharolyticus (1) | | | | | | | | | | | | | | | +--Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076 (1) | | | | | | | | | | | | | +--Enterococcus pallens ATCC BAA-351 (3) | | | | | | | | | | | | | +--Enterococcus phoeniculicola ATCC BAA-412 (1) | | | | | | | | | | | +--Aerococcaceae (1) | | | | | | | | | | | +--Globicatella sp. HMSC072A10 (1) | | | | | | | | | +--Bacillales (44) | | | | | | | | | | | +--Planococcaceae (1) | | | | | | | | | | | | | +--Kurthia sp. 11kri321 (1) | | | | | | | | | | | +--Paenibacillaceae (8) | | | | | | | | | | | | | +--Paenibacillus (2) | | | | | | | | | | | | | | | +--Paenibacillus mucilaginosus 3016 (1) | | | | | | | | | | | | | | | +--Paenibacilluslarvae (1) | | | | | | | | | | | | | | | +--Paenibacillus larvae subsp. larvae DSM 25430 (1) | | | | | | | | | | | | | +--Paenibacillus bovis (1) | | | | | | | | | | | | | +--Paenibacillus sp. FSL H7-0331 (1) | | | | | | | | | | | | | +--Paenibacillus ferrarius (4) | | | | | | | | | | | +--Bacillaceae (35) | | | | | | | | | | | +--Bacillus sp. MUM 13 (1) | | | | | | | | | | | +--Bacillus sp. SGD-V-76 (1) | | | | | | | | | | | +--Bacillus sp. MRMR6 (2) | | | | | | | | | | | +--Lentibacillus amyloliquefaciens (6) | | | | | | | | | | | +--Lysinibacillus (2) | | | | | | | | | | | | | +--Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 (2) | | | | | | | | | | | +--Bacillus weihaiensis (4) | | | | | | | | | | | +--Bacillus sp. FJAT-27916 (6) | | | | | | | | | | | +--Bacillus (1) | | | | | | | | | | | | | +--Bacillus bataviensis LMG 21833 (1) | | | | | | | | | | | +--Bacillus sp. FJAT-27997 (3) | | | | | | | | | | | +--Anaerobacillus sp. NB2006 (5) | | | | | | | | | | | +--Lysinibacillus sp. BF-4 (1) | | | | | | | | | | | +--Paraliobacillus sp. PM-2 (1) | | | | | | | | | | | +--Gracilibacillus (2) | | | | | | | | | | | +--Gracilibacillus boraciitolerans JCM 21714 (1) | | | | | | | | | | | +--Gracilibacillus halophilus YIM-C55.5 (1) | | | | | | | | | +--unclassifiedBacilli (2) | | | | | | | | | +--Bacilli bacterium VT-13-104 (2) | | | | | | | +--unclassifiedFirmicutessensustricto (2) | | | | | | | | | +--Firmicutes bacterium ASF500 (1) | | | | | | | | | +--Firmicutes bacterium M10-2 (1) | | | | | | | +--Tissierellia (6) | | | | | | | | | +--Tissierellales (6) | | | | | | | | | +--Tissierellaceae (6) | | | | | | | | | +--Tissierella (6) | | | | | | | | | +--Tissierella creatinophila DSM 6911 (3) | | | | | | | | | +--Tissierella praeacuta DSM 18095 (3) | | | | | | | +--Erysipelotrichia (3) | | | | | | | +--Erysipelotrichales (3) | | | | | | | +--Erysipelotrichaceae (3) | | | | | | | +--Turicibacter sp. H121 (1) | | | | | | | +--Eggerthia (2) | | | | | | | +--Eggerthia catenaformis OT 569 = DSM 20559 (2) | | | | | +--Bacillota (260) | | | | | +--Clostridia (101) | | | | | | | +--Thermoanaerobacterales (4) | | | | | | | | | +--Thermoanaerobacteraceae (4) | | | | | | | | | +--Thermoanaerobacterium (3) | | | | | | | | | | | +--Thermoanaerobacterium sp. RBIITD (3) | | | | | | | | | +--Aceticella autotrophica (1) | | | | | | | +--Peptostreptococcales (3) | | | | | | | | | +--Natronincolaceae (3) | | | | | | | | | +--Alkaliphilus (3) | | | | | | | | | +--Alkaliphilus sp. B6464 (3) | | | | | | | +--Eubacteriales (65) | | | | | | | | | +--Acutalibacteraceae (3) | | | | | | | | | | | +--Acutalibacter (1) | | | | | | | | | | | | | +--Acutalibacter sp. 1XD8-33 (1) | | | | | | | | | | | +--Caproicibacter fermentans (1) | | | | | | | | | | | +--Anaeromassilibacillus (1) | | | | | | | | | | | +--Anaeromassilibacillus sp. An200 (1) | | | | | | | | | +--Eubacterialesincertaesedis (9) | | | | | | | | | | | +--Gemmiger (1) | | | | | | | | | | | | | +--Gemmiger sp. An194 (1) | | | | | | | | | | | +--Colidextribacter (3) | | | | | | | | | | | | | +--Colidextribacter sp. OB.20 (3) | | | | | | | | | | | +--Flintibacter hominis (3) | | | | | | | | | | | +--EubacterialesFamilyXIII.IncertaeSedis (2) | | | | | | | | | | | +--Sinanaerobacter chloroacetimidivorans (1) | | | | | | | | | | | +--Hominibacterium faecale (1) | | | | | | | | | +--Desulfallaceae (3) | | | | | | | | | | | +--Desulfoscipio (2) | | | | | | | | | | | | | +--Desulfoscipio geothermicus DSM 3669 (2) | | | | | | | | | | | +--Desulfotruncus (1) | | | | | | | | | | | +--Desulfotruncus arcticus DSM 17038 (1) | | | | | | | | | +--Desulfitobacteriaceae (3) | | | | | | | | | | | +--Desulfosporosinus fructosivorans (1) | | | | | | | | | | | +--Desulfosporosinus (2) | | | | | | | | | | | +--Desulfosporosinus sp. HMP52 (2) | | | | | | | | | +--Proteinivoraceae (1) | | | | | | | | | | | +--Alkalicella caledoniensis (1) | | | | | | | | | +--Clostridiaceae (7) | | | | | | | | | | | +--Crassaminicella thermophila (1) | | | | | | | | | | | +--Clostridium (4) | | | | | | | | | | | | | +--Clostridium sp. chh4-2 (2) | | | | | | | | | | | | | +--Clostridium sp. JN-9 (2) | | | | | | | | | | | +--Clostridiaceae bacterium OM08-6BH (1) | | | | | | | | | | | +--Clostridium niameyense (1) | | | | | | | | | +--Desulfotomaculaceae (1) | | | | | | | | | | | +--Pelotomaculum (1) | | | | | | | | | | | +--Pelotomaculum isophthalicicum JI (1) | | | | | | | | | +--Eubacteriaceae (2) | | | | | | | | | | | +--Eubacterium (2) | | | | | | | | | | | +--Eubacterium sp. AF36-5BH (2) | | | | | | | | | +--Peptococcaceae (2) | | | | | | | | | | | +--Desulforamulus profundi (2) | | | | | | | | | +--Oscillospiraceae (34) | | | | | | | | | +--Anaerofilum (2) | | | | | | | | | | | +--Anaerofilum sp. An201 (2) | | | | | | | | | +--Dysosmobacter welbionis (3) | | | | | | | | | +--Lawsonibacter hominis (2) | | | | | | | | | +--Flavonifractor (5) | | | | | | | | | | | +--Flavonifractor sp. An10 (3) | | | | | | | | | | | +--Flavonifractor sp. An306 (2) | | | | | | | | | +--Vescimonas fastidiosa (1) | | | | | | | | | +--Anaerotruncus (3) | | | | | | | | | | | +--Anaerotruncus sp. AF02-27 (3) | | | | | | | | | +--Bittarella massiliensis (ex Durand et al. 2017) (1) | | | | | | | | | +--Ruthenibacterium lactatiformans (1) | | | | | | | | | +--Ruminococcus difficilis (1) | | | | | | | | | +--Ruminiclostridium (8) | | | | | | | | | | | +--Ruminiclostridium sufflavum DSM 19573 (8) | | | | | | | | | +--Faecalibacterium (1) | | | | | | | | | | | +--Faecalibacterium sp. OM04-11BH (1) | | | | | | | | | +--Lawsonibacter faecis (1) | | | | | | | | | +--Vescimonas coprocola (1) | | | | | | | | | +--Ructibacterium gallinarum (3) | | | | | | | | | +--Subdoligranulum (1) | | | | | | | | | +--Subdoligranulum sp. APC924/74 (1) | | | | | | | +--Koleobacterales (1) | | | | | | | | | +--Koleobacteraceae (1) | | | | | | | | | +--Koleobacter methoxysyntrophicus (1) | | | | | | | +--Lachnospirales (28) | | | | | | | +--Lachnospiraceae (27) | | | | | | | | | +--Frisingicoccus caecimuris (1) | | | | | | | | | +--Eisenbergiella massiliensis (1) | | | | | | | | | +--Acetitomaculum (1) | | | | | | | | | | | +--Acetitomaculum ruminis DSM 5522 (1) | | | | | | | | | +--Lachnospiraceae bacterium OF09-33XD (2) | | | | | | | | | +--Blautia argi (1) | | | | | | | | | +--Lachnotalea glycerini (1) | | | | | | | | | +--CandidatusEpulonipiscium (6) | | | | | | | | | | | +--Epulopiscium sp. SCG-D08WGA-EpuloA1 (6) | | | | | | | | | +--Sporofaciens musculi (3) | | | | | | | | | +--Oribacterium (2) | | | | | | | | | | | +--unclassifiedOribacterium (2) | | | | | | | | | | | +--Oribacterium sp. oral taxon 078 str. F0263 (2) | | | | | | | | | +--Dorea (1) | | | | | | | | | | | +--Dorea sp. AF36-15AT (1) | | | | | | | | | +--Roseburia (3) | | | | | | | | | | | +--Roseburia sp. 1XD42-69 (3) | | | | | | | | | +--Mediterraneibacter (1) | | | | | | | | | | | +--Mediterraneibacter sp. gm002 (1) | | | | | | | | | +--Sellimonas intestinalis (2) | | | | | | | | | +--Herbinix hemicellulosilytica (1) | | | | | | | | | +--Mediterraneibacter catenae (1) | | | | | | | +--Cellulosilyticaceae (1) | | | | | | | +--Holtiella tumoricola (1) | | | | | +--Bacilli (149) | | | | | | | +--Lactobacillales (3) | | | | | | | | | +--Enterococcaceae (2) | | | | | | | | | | | +--Enterococcus florum (1) | | | | | | | | | | | +--Vagococcus vulneris (1) | | | | | | | | | +--Aerococcaceae (1) | | | | | | | | | +--Facklamia (1) | | | | | | | | | +--Facklamia sp. 252 (1) | | | | | | | +--Bacillales (146) | | | | | | | +--Paenibacillaceae (18) | | | | | | | | | +--Cohnella fermenti (1) | | | | | | | | | +--Paenibacillus dendrobii (1) | | | | | | | | | +--Paenibacillus (7) | | | | | | | | | | | +--Paenibacillus sp. GP183 (1) | | | | | | | | | | | +--Paenibacillus sp. N3.4 (4) | | | | | | | | | | | +--Paenibacillus sp. yr247 (2) | | | | | | | | | +--Paenibacillus baekrokdamisoli (1) | | | | | | | | | +--Paenibacillus lemnae (1) | | | | | | | | | +--Cohnella (1) | | | | | | | | | | | +--Cohnella sp. CIP 111063 (1) | | | | | | | | | +--Paenibacillus lutimineralis (2) | | | | | | | | | +--Paenibacillus albidus (1) | | | | | | | | | +--Paenibacillus psychroresistens (2) | | | | | | | | | +--Paenibacillaceae bacterium (1) | | | | | | | +--Planococcaceae (18) | | | | | | | | | +--Sporosarcina (9) | | | | | | | | | | | +--Sporosarcina sp. BI001-red (4) | | | | | | | | | | | +--Sporosarcina sp. Marseille-Q4063 (5) | | | | | | | | | +--Planococcus lenghuensis (5) | | | | | | | | | +--Filibacter tadaridae (2) | | | | | | | | | +--Solibacillus (2) | | | | | | | | | +--Solibacillus sp. R5-41 (2) | | | | | | | +--Bacillaceae (110) | | | | | | | +--Pueribacillus theae (1) | | | | | | | +--Cytobacillus depressus (2) | | | | | | | +--Bacillus aquiflavi (7) | | | | | | | +--Lentibacillus (13) | | | | | | | | | +--Lentibacillus sp. JNUCC-1 (4) | | | | | | | | | +--Lentibacillus sp. CBA3610 (9) | | | | | | | +--Lysinibacillus alkalisoli (1) | | | | | | | +--Cytobacillus dafuensis (2) | | | | | | | +--Oceanobacillus zhaokaii (2) | | | | | | | +--Psychrobacillus glaciei (20) | | | | | | | +--Metabacillus lacus (1) | | | | | | | +--Lentibacillus populi (3) | | | | | | | +--Oceanobacillus bengalensis (5) | | | | | | | +--Virgibacillus indicus (3) | | | | | | | +--Bacillaceae bacterium SAS-127 (1) | | | | | | | +--Niallia endozanthoxylica (1) | | | | | | | +--Terrihalobacillus insolitus (4) | | | | | | | +--Bacillus suaedae (2) | | | | | | | +--Neobacillus mesonae (1) | | | | | | | +--Niallia taxi (3) | | | | | | | +--Bacillus (18) | | | | | | | | | +--Bacillus sp. cl95 (1) | | | | | | | | | +--Bacillus sp. FJAT-49711 (1) | | | | | | | | | +--Bacillus sp. HMF5848 (2) | | | | | | | | | +--Bacillus sp. PS06 (1) | | | | | | | | | +--Bacillus sp. 7884-1 (1) | | | | | | | | | +--Bacillus sp. HNG (1) | | | | | | | | | +--Bacillus sp. B1-b2 (4) | | | | | | | | | +--Bacillus sp. OK048 (1) | | | | | | | | | +--Bacillus sp. AFS041924 (2) | | | | | | | | | +--Bacillus sp. AFS018417 (1) | | | | | | | | | +--Bacillus sp. AFS073361 (1) | | | | | | | | | +--Bacillus sp. AFS040349 (1) | | | | | | | | | +--Bacillus sp. THAF10 (1) | | | | | | | +--Salicibibacter halophilus (2) | | | | | | | +--Domibacillus mangrovi (2) | | | | | | | +--Mesobacillus (5) | | | | | | | | | +--Mesobacillus boroniphilus JCM 21738 (5) | | | | | | | +--Cerasibacillus terrae (1) | | | | | | | +--Ectobacillus ponti (2) | | | | | | | +--Metabacillus arenae (8) | | | | | +--Negativicutes (3) | | | | | | | +--Selenomonadales (3) | | | | | | | +--Sporomusaceae (3) | | | | | | | +--Sporomusa (3) | | | | | | | +--Sporomusa silvacetica DSM 10669 (2) | | | | | | | +--Sporomusa acidovorans DSM 3132 (1) | | | | | +--Erysipelotrichia (7) | | | | | +--Erysipelotrichales (7) | | | | | +--Erysipelotrichaceae (7) | | | | | +--Erysipelotrichaceae bacterium RD49 (1) | | | | | +--Amedibacterium intestinale (6) | | | +--bacterium D16-59 (1) | +--Viruses (7) | | | +--Duplodnaviria (6) | | | | | +--Heunggongvirae (6) | | | | | +--Uroviricota (6) | | | | | +--Caudoviricetes (6) | | | | | +--Staphylococcus phage PALS_2 (1) | | | | | +--Listeria phage LPJP1 (4) | | | | | +--Enterococcus phage VEsP-1 (1) | | | +--dsDNAviruses,noRNAstage (1) | | | +--Caudovirales (1) | | | +--Myoviridae (1) | | | +--Bacillus phage AR9 (1) | +--halophilic and alkaliphilic bacterium HN30 (2) | +--rumen bacterium NK3A20 (1)