# Species tree for RF01989 # Generated from Rfam version 15.00 | +--Eukaryota (17) | | | +--Metazoa (10) | | | | | +--Nematoda (2) | | | | | | | +--Chromadorea (2) | | | | | | | +--Rhabditida (2) | | | | | | | +--Panagrolaimoidea (2) | | | | | | | +--Panagrolaimidae (2) | | | | | | | +--Panagrolaimus superbus (2) | | | | | +--Chordata (6) | | | | | | | +--Craniata (6) | | | | | | | +--Vertebrata (6) | | | | | | | +--Euteleostomi (6) | | | | | | | +--Testudines (1) | | | | | | | | | +--Cryptodira (1) | | | | | | | | | +--Testudinoidea (1) | | | | | | | | | +--Chelydridae (1) | | | | | | | | | +--Platysternon megacephalum (big-headed turtle) (1) | | | | | | | +--Archosauria (5) | | | | | | | +--Dinosauria (5) | | | | | | | +--Saurischia (5) | | | | | | | +--Theropoda (5) | | | | | | | +--Coelurosauria (5) | | | | | | | +--Aves (5) | | | | | | | +--Neognathae (5) | | | | | | | +--Passeriformes (4) | | | | | | | | | +--Corvoidea (1) | | | | | | | | | | | +--Irenidae (1) | | | | | | | | | | | +--Chloropsis hardwickii (1) | | | | | | | | | +--Sittidae (2) | | | | | | | | | | | +--Tichodroma muraria (2) | | | | | | | | | +--Timaliidae (1) | | | | | | | | | +--Pteruthius melanotis (1) | | | | | | | +--Musophagiformes (1) | | | | | | | +--Musophagidae (1) | | | | | | | +--Corythaeola cristata (great blue turaco) (1) | | | | | +--Platyhelminthes (1) | | | | | | | +--Trematoda (1) | | | | | | | +--Digenea (1) | | | | | | | +--Opisthorchiida (1) | | | | | | | +--Opisthorchiata (1) | | | | | | | +--Opisthorchiidae (1) | | | | | | | +--Clonorchis sinensis (1) | | | | | +--Porifera (1) | | | | | +--Demospongiae (1) | | | | | +--Tetractinomorpha (1) | | | | | +--Astrophorida (1) | | | | | +--Geodiidae (1) | | | | | +--Geodia barretti (1) | | | +--Fungi (1) | | | | | +--Fungiincertaesedis (1) | | | | | +--Basalfungallineages (1) | | | | | +--Mucoromycotina (1) | | | | | +--Mucorales (1) | | | | | +--Mucoraceae (1) | | | | | +--Rhizopus delemar (1) | | | +--Viridiplantae (4) | | | | | +--Streptophyta (3) | | | | | | | +--Embryophyta (3) | | | | | | | +--Tracheophyta (3) | | | | | | | +--Spermatophyta (3) | | | | | | | +--Magnoliophyta (3) | | | | | | | +--Liliopsida (1) | | | | | | | | | +--Poales (1) | | | | | | | | | +--Poaceae (1) | | | | | | | | | +--BEPclade (1) | | | | | | | | | +--Ehrhartoideae (1) | | | | | | | | | +--Oryzeae (1) | | | | | | | | | +--Oryza sativa Indica Group (1) | | | | | | | +--eudicotyledons (2) | | | | | | | +--coreeudicotyledons (1) | | | | | | | | | +--rosids (1) | | | | | | | | | +--fabids (1) | | | | | | | | | +--Fagales (1) | | | | | | | | | +--Betulaceae (1) | | | | | | | | | +--Carpinus fangiana (1) | | | | | | | +--Ranunculales (1) | | | | | | | +--Papaveraceae (1) | | | | | | | +--Papaver nudicaule (1) | | | | | +--Chlorophyta (1) | | | | | +--Chlorophyceae (1) | | | | | +--Chlamydomonadales (1) | | | | | +--Volvocaceae (1) | | | | | +--Pleodorina starrii (1) | | | +--Opisthokonta (2) | | | +--Fungi (2) | | | +--Dikarya (2) | | | +--Ascomycota (2) | | | +--saccharomyceta (2) | | | +--Pezizomycotina (2) | | | +--leotiomyceta (2) | | | +--sordariomyceta (2) | | | +--Sordariomycetes (2) | | | +--Hypocreomycetidae (2) | | | +--Hypocreales (2) | | | +--Cordycipitaceae (2) | | | +--Beauveria (2) | | | +--Beauveria bassiana D1-5 (2) | +--Bacteria (629) | | | +--Actinobacteria (4) | | | | | +--Coriobacteridae (4) | | | | | +--Coriobacteriales (4) | | | | | +--Coriobacterineae (4) | | | | | +--Coriobacteriaceae (4) | | | | | +--Slackia heliotrinireducens DSM 20476 (1) | | | | | +--Eggerthella lenta DSM 2243 (1) | | | | | +--Gordonibacter pamelaeae 7-10-1-b (1) | | | | | +--Paraeggerthella hongkongensis (1) | | | +--Proteobacteria (347) | | | | | +--Alphaproteobacteria (71) | | | | | | | +--Polymorphum gilvum SL003B-26A1 (1) | | | | | | | +--Rhizobiales (41) | | | | | | | | | +--Bartonellaceae (2) | | | | | | | | | | | +--Bartonella apis (1) | | | | | | | | | | | +--Bartonella (1) | | | | | | | | | | | +--Bartonella tamiae Th239 (1) | | | | | | | | | +--Brucellaceae (3) | | | | | | | | | | | +--Ochrobactrum (1) | | | | | | | | | | | | | +--Ochrobactrum intermedium 229E (1) | | | | | | | | | | | +--Ochrobactrum anthropi ATCC 49188 (1) | | | | | | | | | | | +--Mycoplana dimorpha (1) | | | | | | | | | +--Methylocystaceae (1) | | | | | | | | | | | +--Methylopila sp. JZL-4 (1) | | | | | | | | | +--Aurantimonadaceae (2) | | | | | | | | | | | +--Aurantimonas altamirensis (1) | | | | | | | | | | | +--Aurantimonas sp. USBA 369 (1) | | | | | | | | | +--Phyllobacteriaceae (3) | | | | | | | | | | | +--Paramesorhizobium deserti (1) | | | | | | | | | | | +--Mesorhizobium sp. LC103 (1) | | | | | | | | | | | +--Mesorhizobium sp. ORS3428 (1) | | | | | | | | | +--Hyphomicrobiaceae (7) | | | | | | | | | | | +--Hyphomicrobium sp. MC1 (1) | | | | | | | | | | | +--Rhodoplanes serenus (1) | | | | | | | | | | | +--Angulomicrobium tetraedale (1) | | | | | | | | | | | +--Rhodoplanes elegans (1) | | | | | | | | | | | +--Aquabacter spiritensis (1) | | | | | | | | | | | +--Hyphomicrobium facile (1) | | | | | | | | | | | +--Rhodoplanes roseus (1) | | | | | | | | | +--Xanthobacteraceae (8) | | | | | | | | | | | +--Starkeya novella DSM 506 (1) | | | | | | | | | | | +--Azorhizobium sp. DSM 18749 (2) | | | | | | | | | | | +--Xanthobacter autotrophicus Py2 (1) | | | | | | | | | | | +--Xanthobacter tagetidis (1) | | | | | | | | | | | +--Pseudolabrys sp. Root1462 (1) | | | | | | | | | | | +--Pseudolabrys taiwanensis (1) | | | | | | | | | | | +--Azorhizobium caulinodans ORS 571 (1) | | | | | | | | | +--Rhizobiaceae (7) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (4) | | | | | | | | | | | | | +--Rhizobium alkalisoli (1) | | | | | | | | | | | | | +--Rhizobium cellulosilyticum (1) | | | | | | | | | | | | | +--Rhizobium sp. Root1212 (1) | | | | | | | | | | | | | +--Rhizobium sp. YS-1r (1) | | | | | | | | | | | +--Sinorhizobium/Ensifergroup (3) | | | | | | | | | | | +--Sinorhizobium terangae (1) | | | | | | | | | | | +--Sinorhizobium meliloti 1021 (1) | | | | | | | | | | | +--Ensifer sp. YIC4027 (1) | | | | | | | | | +--Methylobacteriaceae (2) | | | | | | | | | | | +--Microvirga flocculans (1) | | | | | | | | | | | +--Microvirga subterranea (1) | | | | | | | | | +--Bradyrhizobiaceae (4) | | | | | | | | | | | +--Bosea sp. LC85 (1) | | | | | | | | | | | +--Bosea thiooxidans (1) | | | | | | | | | | | +--Oligotropha carboxidovorans OM5 (2) | | | | | | | | | +--Beijerinckiaceae (2) | | | | | | | | | +--Methylocella tundrae (1) | | | | | | | | | +--Methylocella silvestris BL2 (1) | | | | | | | +--Rhodospirillales (7) | | | | | | | | | +--Acetobacteraceae (4) | | | | | | | | | | | +--Roseomonas deserti (1) | | | | | | | | | | | +--Roseomonas sp. N75 (1) | | | | | | | | | | | +--Roseomonas mucosa (1) | | | | | | | | | | | +--Roseomonas rosea (1) | | | | | | | | | +--Rhodospirillaceae (3) | | | | | | | | | +--Azospirillum amazonense Y2 (1) | | | | | | | | | +--Magnetospirillum moscoviense (1) | | | | | | | | | +--Inquilinus limosus (1) | | | | | | | +--Rhodobacterales (22) | | | | | | | +--Rhodobacteraceae (22) | | | | | | | +--Paracoccus sp. sw-3 (1) | | | | | | | +--Paracoccus alcaliphilus (1) | | | | | | | +--Paracoccus sp. NB88 (1) | | | | | | | +--Rhodovulum sp. PH10 (1) | | | | | | | +--Paracoccus sp. SM22M-07 (1) | | | | | | | +--Paracoccus homiensis (1) | | | | | | | +--Paracoccus contaminans (1) | | | | | | | +--Haematobacter massiliensis (1) | | | | | | | +--Paracoccus sanguinis (1) | | | | | | | +--Amaricoccus macauensis (1) | | | | | | | +--Paracoccus sp. MJ17 (1) | | | | | | | +--Paracoccus sp. J56 (1) | | | | | | | +--Paracoccus yeei (1) | | | | | | | +--Paracoccus aminovorans (1) | | | | | | | +--Paracoccus (1) | | | | | | | | | +--Paracoccus aminophilus JCM 7686 (1) | | | | | | | +--Paracoccus sulfuroxidans (1) | | | | | | | +--Paracoccus denitrificans PD1222 (1) | | | | | | | +--Paracoccus thiocyanatus (1) | | | | | | | +--Paracoccus sp. 228 (1) | | | | | | | +--Paracoccus alkenifer (1) | | | | | | | +--Paracoccus sp. Zy-3 (1) | | | | | | | +--Paracoccus aestuarii (1) | | | | | +--Gammaproteobacteria (172) | | | | | | | +--unclassifiedGammaproteobacteria (2) | | | | | | | | | +--Competibacteraceae (1) | | | | | | | | | | | +--CandidatusCompetibacter (1) | | | | | | | | | | | +--Candidatus Competibacter denitrificans Run_A_D11 (1) | | | | | | | | | +--Wohlfahrtiimonas (1) | | | | | | | | | +--Wohlfahrtiimonas chitiniclastica SH04 (1) | | | | | | | +--Enterobacterales (24) | | | | | | | | | +--Yersiniaceae (2) | | | | | | | | | | | +--Serratia sp. DD3 (1) | | | | | | | | | | | +--Chania (1) | | | | | | | | | | | +--Chania multitudinisentens RB-25 (1) | | | | | | | | | +--Morganellaceae (7) | | | | | | | | | | | +--Moellerella (2) | | | | | | | | | | | | | +--Moellerella wisconsensis ATCC 35017 (2) | | | | | | | | | | | +--Xenorhabdus (2) | | | | | | | | | | | | | +--Xenorhabdus bovienii str. kraussei Quebec (1) | | | | | | | | | | | | | +--Xenorhabdus szentirmaii DSM 16338 (1) | | | | | | | | | | | +--Morganella (2) | | | | | | | | | | | | | +--Morganellamorganii (2) | | | | | | | | | | | | | +--Morganella morganii subsp. morganii KT (2) | | | | | | | | | | | +--Providencia (1) | | | | | | | | | | | +--Providencia sneebia DSM 19967 (1) | | | | | | | | | +--Enterobacteriaceae (12) | | | | | | | | | | | +--Klebsiella sp. RIT-PI-d (2) | | | | | | | | | | | +--Escherichia (1) | | | | | | | | | | | | | +--Escherichia vulneris NBRC 102420 (1) | | | | | | | | | | | +--unclassifiedEnterobacteriaceae (2) | | | | | | | | | | | | | +--Enterobacteriaceae bacterium strain FGI 57 (2) | | | | | | | | | | | +--Klebsiella michiganensis (2) | | | | | | | | | | | +--Mangrovibacter sp. MFB070 (1) | | | | | | | | | | | +--Buttiauxella (2) | | | | | | | | | | | | | +--Buttiauxella agrestis ATCC 33320 (2) | | | | | | | | | | | +--Atlantibacter (2) | | | | | | | | | | | +--Atlantibacter hermannii NBRC 105704 (2) | | | | | | | | | +--unclassifiedEnterobacterales (1) | | | | | | | | | | | +--Plesiomonas (1) | | | | | | | | | | | +--Plesiomonas shigelloides 302-73 (1) | | | | | | | | | +--Hafniaceae (2) | | | | | | | | | +--Hafnia (2) | | | | | | | | | +--Hafnia alvei FB1 (2) | | | | | | | +--Pasteurellales (25) | | | | | | | | | +--Haemophilus felis (1) | | | | | | | | | +--Bisgaard Taxon 5 (1) | | | | | | | | | +--Bisgaard Taxon 40 (1) | | | | | | | | | +--Actinobacillus rossii (1) | | | | | | | | | +--Pasteurellaceae (19) | | | | | | | | | | | +--Haemophilus paraphrohaemolyticus (1) | | | | | | | | | | | +--Mannheimia succiniciproducens MBEL55E (1) | | | | | | | | | | | +--Pasteurella multocida subsp. multocida str. Pm70 (1) | | | | | | | | | | | +--Actinobacillus pleuropneumoniae serovar 5b str. L20 (1) | | | | | | | | | | | +--Haemophilus parasuis SH0165 (1) | | | | | | | | | | | +--Pasteurella (1) | | | | | | | | | | | | | +--Pasteurella bettyae CCUG 2042 (1) | | | | | | | | | | | +--Actinobacillus muris (1) | | | | | | | | | | | +--Haemophilus influenzae Rd KW20 (1) | | | | | | | | | | | +--Aggregatibacter segnis ATCC 33393 (1) | | | | | | | | | | | +--Haemophilus paracuniculus (1) | | | | | | | | | | | +--Gallibacterium salpingitidis (1) | | | | | | | | | | | +--Volucribacter psittacicida (1) | | | | | | | | | | | +--Chelonobacter oris (1) | | | | | | | | | | | +--Actinobacillus indolicus (1) | | | | | | | | | | | +--Lonepinella koalarum (1) | | | | | | | | | | | +--unclassifiedPasteurellaceae (1) | | | | | | | | | | | | | +--Pasteurellaceae bacterium 15-036681 (1) | | | | | | | | | | | +--Actinobacillus succinogenes 130Z (1) | | | | | | | | | | | +--Haemophilus pittmaniae (1) | | | | | | | | | | | +--Avibacterium volantium (1) | | | | | | | | | +--Pasteurellaceae bacterium Baika1 (1) | | | | | | | | | +--Bisgaard Taxon 7 (1) | | | | | | | +--Alteromonadales (5) | | | | | | | | | +--Shewanellaceae (5) | | | | | | | | | +--Shewanella oneidensis MR-1 (1) | | | | | | | | | +--Shewanella pealeana ATCC 700345 (1) | | | | | | | | | +--Shewanella fodinae (1) | | | | | | | | | +--Shewanella mangrovi (1) | | | | | | | | | +--Shewanella algae (1) | | | | | | | +--Vibrionales (2) | | | | | | | | | +--Vibrionaceae (2) | | | | | | | | | +--Photobacterium damselae subsp. damselae CIP 102761 (1) | | | | | | | | | +--Photobacterium aquimaris (1) | | | | | | | +--Xanthomonadales (5) | | | | | | | | | +--Rhodanobacteraceae (1) | | | | | | | | | | | +--Dokdonella (1) | | | | | | | | | | | +--Dokdonella koreensis DS-123 (1) | | | | | | | | | +--Xanthomonadaceae (3) | | | | | | | | | | | +--Stenotrophomonas (1) | | | | | | | | | | | | | +--Stenotrophomonas maltophilia K279a (1) | | | | | | | | | | | +--Dyella soli (1) | | | | | | | | | | | +--Luteimonas sp. JM171 (1) | | | | | | | | | +--Pseudomonas boreopolis (1) | | | | | | | +--Thiotrichales (1) | | | | | | | | | +--Thiotrichaceae (1) | | | | | | | | | +--Thiothrix eikelboomii (1) | | | | | | | +--Chromatiales (1) | | | | | | | | | +--Chromatiaceae (1) | | | | | | | | | +--Allochromatium vinosum DSM 180 (1) | | | | | | | +--Enterobacteriales (80) | | | | | | | | | +--Enterobacteriaceae (80) | | | | | | | | | +--Serratia fonticola (2) | | | | | | | | | +--Shigella boydii CDC 3083-94 (2) | | | | | | | | | +--Xenorhabdus japonica (1) | | | | | | | | | +--Cedecea neteri (2) | | | | | | | | | +--Leminorella richardii (1) | | | | | | | | | +--Escherichia coli 55989 (2) | | | | | | | | | +--Salmonella (2) | | | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (2) | | | | | | | | | +--Trabulsiella odontotermitis (2) | | | | | | | | | +--Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- (2) | | | | | | | | | +--Escherichia coli E24377A (2) | | | | | | | | | +--Escherichia coli O157:H7 (2) | | | | | | | | | +--Escherichia coli K-12 (2) | | | | | | | | | +--Salmonella enterica subsp. arizonae (2) | | | | | | | | | +--Serratia rubidaea (1) | | | | | | | | | +--Pantoea vagans (1) | | | | | | | | | +--Shigella dysenteriae Sd197 (2) | | | | | | | | | +--Yersinia ruckeri (1) | | | | | | | | | +--Escherichia coli O83:H1 str. NRG 857C (2) | | | | | | | | | +--Serratia odorifera DSM 4582 (1) | | | | | | | | | +--Kluyvera cryocrescens (2) | | | | | | | | | +--Shigella sonnei Ss046 (2) | | | | | | | | | +--Escherichia coli O127:H6 str. E2348/69 (2) | | | | | | | | | +--Budvicia aquatica (2) | | | | | | | | | +--Xenorhabdus koppenhoeferi (1) | | | | | | | | | +--Enterobacter gergoviae (2) | | | | | | | | | +--Enterobacter sp. 638 (2) | | | | | | | | | +--Citrobacter freundii (2) | | | | | | | | | +--Arsenophonus nasoniae (son-killer infecting Nasonia vitripennis) (1) | | | | | | | | | +--Escherichia coli HS (2) | | | | | | | | | +--Escherichia coli APEC O1 (2) | | | | | | | | | +--Escherichia coli BL21(DE3) (2) | | | | | | | | | +--Photorhabdus luminescens subsp. laumondii TTO1 (1) | | | | | | | | | +--Enterobacter (2) | | | | | | | | | | | +--Enterobacter cloacae SCF1 (2) | | | | | | | | | +--Serratia ficaria (1) | | | | | | | | | +--Citrobacter koseri ATCC BAA-895 (2) | | | | | | | | | +--Escherichia coli CFT073 (2) | | | | | | | | | +--Erwinia billingiae (1) | | | | | | | | | +--Yersinia pestis CO92 (1) | | | | | | | | | +--Shigella flexneri 2a str. 301 (2) | | | | | | | | | +--Edwardsiella hoshinae (1) | | | | | | | | | +--Cronobacter sakazakii ATCC BAA-894 (1) | | | | | | | | | +--Providencia stuartii (2) | | | | | | | | | +--Citrobacter rodentium ICC168 (2) | | | | | | | | | +--Serratia (1) | | | | | | | | | | | +--Serratia symbiotica str. Tucson (1) | | | | | | | | | +--Escherichia coli S88 (2) | | | | | | | | | +--Escherichia blattae DSM 4481 (2) | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Poona (2) | | | | | | | | | +--Klebsiella pneumoniae subsp. ozaenae (1) | | | | | | | +--Oceanospirillales (4) | | | | | | | | | +--Halomonadaceae (4) | | | | | | | | | +--Kushneria marisflavi (1) | | | | | | | | | +--Halotalea alkalilenta (1) | | | | | | | | | +--Salinicola sp. MIT1003 (1) | | | | | | | | | +--Halomonas sp. A-1 (1) | | | | | | | +--Pseudomonadales (23) | | | | | | | +--Pseudomonadaceae (22) | | | | | | | | | +--Pseudomonas sp. M30-35 (1) | | | | | | | | | +--Pseudomonas fluorescens HK44 (1) | | | | | | | | | +--Pseudomonas aeruginosa PAO1 (1) | | | | | | | | | +--Pseudomonas panipatensis (1) | | | | | | | | | +--Serpens flexibilis (1) | | | | | | | | | +--Pseudomonas putida KT2440 (1) | | | | | | | | | +--Pseudomonas jinjuensis (1) | | | | | | | | | +--Pseudomonas saudiphocaensis (2) | | | | | | | | | +--Pseudomonas stutzeri (1) | | | | | | | | | +--Pseudomonas benzenivorans (1) | | | | | | | | | +--Pseudomonas sp. HPB0071 (2) | | | | | | | | | +--Pseudomonas stutzeri A1501 (2) | | | | | | | | | +--Pseudomonas indica (1) | | | | | | | | | +--Pseudomonas sp. FeS53a (1) | | | | | | | | | +--Pseudomonas sp. M47T1 (1) | | | | | | | | | +--Pseudomonas sp. BAY1663 (1) | | | | | | | | | +--Pseudomonas (2) | | | | | | | | | | | +--Pseudomonasaeruginosagroup (1) | | | | | | | | | | | | | +--Pseudomonas resinovorans NBRC 106553 (1) | | | | | | | | | | | +--Pseudomonas knackmussii B13 (1) | | | | | | | | | +--Pseudomonas oryzihabitans (1) | | | | | | | +--Moraxellaceae (1) | | | | | | | +--Enhydrobacter aerosaccus (1) | | | | | +--Betaproteobacteria (97) | | | | | | | +--unclassifiedBetaproteobacteria (1) | | | | | | | | | +--beta proteobacterium AAP99 (1) | | | | | | | +--Burkholderiales (80) | | | | | | | | | +--Alcaligenaceae (12) | | | | | | | | | | | +--Oligella (1) | | | | | | | | | | | | | +--Oligella urethralis DNF00040 (1) | | | | | | | | | | | +--Pusillimonas terrae (1) | | | | | | | | | | | +--Pusillimonas noertemannii (1) | | | | | | | | | | | +--Pusillimonas sp. B201 (1) | | | | | | | | | | | +--Bordetella ansorpii (1) | | | | | | | | | | | +--Bordetella trematum (1) | | | | | | | | | | | +--Pusillimonas sp. PB3-7B (1) | | | | | | | | | | | +--Bordetella hinzii (1) | | | | | | | | | | | +--Alcaligenes sp. EGD-AK7 (1) | | | | | | | | | | | +--Bordetella avium 197N (1) | | | | | | | | | | | +--Paenalcaligenes hominis (1) | | | | | | | | | | | +--Bordetella sp. N (1) | | | | | | | | | +--Alcaligenaceae bacterium BZ59 (1) | | | | | | | | | +--Roseateles depolymerans (1) | | | | | | | | | +--Roseateles aquatilis (1) | | | | | | | | | +--Oxalobacteraceae (8) | | | | | | | | | | | +--Janthinobacterium sp. KBS0711 (1) | | | | | | | | | | | +--Collimonas fungivorans Ter331 (1) | | | | | | | | | | | +--Duganella sp. Leaf126 (1) | | | | | | | | | | | +--Massilia (1) | | | | | | | | | | | | | +--Massilia timonae CCUG 45783 (1) | | | | | | | | | | | +--Massilia sp. Root351 (1) | | | | | | | | | | | +--Janthinobacterium (1) | | | | | | | | | | | | | +--Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 (1) | | | | | | | | | | | +--Massilia sp. D5 (1) | | | | | | | | | | | +--Oxalicibacterium flavum (1) | | | | | | | | | +--unclassifiedBurkholderiales (5) | | | | | | | | | | | +--BurkholderialesGeneraincertaesedis (5) | | | | | | | | | | | +--Ideonella sakaiensis (1) | | | | | | | | | | | +--Mitsuaria sp. 7 (1) | | | | | | | | | | | +--Rubrivivax (1) | | | | | | | | | | | | | +--Rubrivivax gelatinosus IL144 (1) | | | | | | | | | | | +--Rhizobacter sp. Root29 (1) | | | | | | | | | | | +--Paucibacter sp. KCTC 42545 (1) | | | | | | | | | +--Leptothrix mobilis (1) | | | | | | | | | +--Oxalobacteraceae bacterium Cr9-30 (1) | | | | | | | | | +--Burkholderiaceae (33) | | | | | | | | | | | +--Burkholderia xenovorans LB400 (1) | | | | | | | | | | | +--Burkholderia sediminicola (1) | | | | | | | | | | | +--Burkholderia sp. TNe-841 (1) | | | | | | | | | | | +--Paraburkholderia ribeironis (1) | | | | | | | | | | | +--Burkholderia glathei (1) | | | | | | | | | | | +--Burkholderia sp. IMER-B1-49 (1) | | | | | | | | | | | +--Pandoraea pnomenusa (1) | | | | | | | | | | | +--Cupriavidus sp. ASC-64 (1) | | | | | | | | | | | +--Burkholderia sp. OLGA172 (2) | | | | | | | | | | | +--Burkholderia sp. LMG 22936 (1) | | | | | | | | | | | +--Burkholderia sacchari (1) | | | | | | | | | | | +--Lautropia mirabilis ATCC 51599 (1) | | | | | | | | | | | +--Burkholderia (6) | | | | | | | | | | | | | +--Burkholderia pseudomallei K96243 (1) | | | | | | | | | | | | | +--Burkholderia singularis (1) | | | | | | | | | | | | | +--Burkholderia seminalis (1) | | | | | | | | | | | | | +--Burkholderia dolosa AUO158 (1) | | | | | | | | | | | | | +--Burkholderia multivorans ATCC 17616 (1) | | | | | | | | | | | | | +--Burkholderia glumae PG1 (1) | | | | | | | | | | | +--Burkholderia phymatum STM815 (1) | | | | | | | | | | | +--Burkholderia sp. PO-04-17-38 (1) | | | | | | | | | | | +--Burkholderia phenazinium (1) | | | | | | | | | | | +--Burkholderia sp. JPY461 (1) | | | | | | | | | | | +--Burkholderia soli (1) | | | | | | | | | | | +--Burkholderia sp. SRS-W-2-2016 (1) | | | | | | | | | | | +--Burkholderia sp. Leaf177 (1) | | | | | | | | | | | +--Burkholderia glumae BGR1 (1) | | | | | | | | | | | +--Cupriavidus sp. USMAA2-4 (1) | | | | | | | | | | | +--Burkholderia sp. IMER-B1-33 (1) | | | | | | | | | | | +--Burkholderia caryophylli (1) | | | | | | | | | | | +--Burkholderia tropica (1) | | | | | | | | | | | +--Burkholderia sp. lig30 (1) | | | | | | | | | | | +--Candidatus Burkholderia verschuerenii (1) | | | | | | | | | +--Comamonadaceae bacterium NML970147 (1) | | | | | | | | | +--Ideonella dechloratans (1) | | | | | | | | | +--Comamonadaceae (15) | | | | | | | | | +--Acidovorax caeni (1) | | | | | | | | | +--Hylemonella gracilis ATCC 19624 (1) | | | | | | | | | +--Pseudorhodoferax sp. Leaf267 (1) | | | | | | | | | +--Pelomonas puraquae (1) | | | | | | | | | +--Variovorax sp. PAMC 28711 (1) | | | | | | | | | +--Comamonas terrigena (1) | | | | | | | | | +--Comamonas denitrificans (1) | | | | | | | | | +--Acidovorax sp. 12322-1 (1) | | | | | | | | | +--Delftia acidovorans SPH-1 (1) | | | | | | | | | +--Comamonas (1) | | | | | | | | | | | +--Comamonas aquatica DA1877 (1) | | | | | | | | | +--Pelomonas saccharophila (1) | | | | | | | | | +--Pseudacidovorax intermedius (1) | | | | | | | | | +--Kinneretia asaccharophila (1) | | | | | | | | | +--Acidovorax sp. MR-S7 (1) | | | | | | | | | +--Schlegelella thermodepolymerans (1) | | | | | | | +--Rhodocyclales (9) | | | | | | | | | +--Rhodocyclaceae (9) | | | | | | | | | +--Azospira restricta (1) | | | | | | | | | +--Sulfuritalea (1) | | | | | | | | | | | +--Sulfuritalea hydrogenivorans sk43H (1) | | | | | | | | | +--Zoogloea ramigera (1) | | | | | | | | | +--Petrobacter sp. JHK30 (1) | | | | | | | | | +--Thauera (2) | | | | | | | | | | | +--Thauera linaloolentis 47Lol = DSM 12138 (1) | | | | | | | | | | | +--Thauera terpenica 58Eu (1) | | | | | | | | | +--Azoarcus indigens (1) | | | | | | | | | +--Propionivibrio dicarboxylicus (1) | | | | | | | | | +--Azonexus hydrophilus (1) | | | | | | | +--Neisseriales (5) | | | | | | | | | +--Chromobacteriaceae (1) | | | | | | | | | | | +--Chromobacteriumgroup (1) | | | | | | | | | | | +--Chromobacterium sp. LK11 (1) | | | | | | | | | +--Neisseriaceae (4) | | | | | | | | | +--Microvirgula aerodenitrificans (1) | | | | | | | | | +--Pseudogulbenkiania sp. NH8B (1) | | | | | | | | | +--Chromobacterium sp. HT27 (1) | | | | | | | | | +--Laribacter hongkongensis HLHK9 (1) | | | | | | | +--Hydrogenophilales (2) | | | | | | | +--Hydrogenophilaceae (2) | | | | | | | +--Thiobacillus plumbophilus (1) | | | | | | | +--Thiobacillus sp. (1) | | | | | +--Deltaproteobacteria (3) | | | | | | | +--Myxococcales (2) | | | | | | | | | +--Cystobacterineae (2) | | | | | | | | | +--Myxococcaceae (2) | | | | | | | | | +--Anaeromyxobacter sp. Fw109-5 (1) | | | | | | | | | +--Anaeromyxobacter dehalogenans 2CP-C (1) | | | | | | | +--Desulfuromonadales (1) | | | | | | | +--Geobacteraceae (1) | | | | | | | +--Geobacter pickeringii (1) | | | | | +--beta proteobacterium LF4-65 (1) | | | | | +--alpha proteobacterium SK200a-9 (1) | | | | | +--delta/epsilonsubdivisions (2) | | | | | +--Deltaproteobacteria (2) | | | | | +--Desulfuromonadales (1) | | | | | | | +--Geobacteraceae (1) | | | | | | | +--Geobacter sp. OR-1 (1) | | | | | +--Desulfobacterales (1) | | | | | +--Desulfobulbaceae (1) | | | | | +--Desulfocapsa (1) | | | | | +--Desulfocapsa sulfexigens DSM 10523 (1) | | | +--bacterium YEK0313 (1) | | | +--bacterium HR11 (1) | | | +--Myxococcota (1) | | | | | +--Myxococcia (1) | | | | | +--Myxococcales (1) | | | | | +--Cystobacterineae (1) | | | | | +--Anaeromyxobacteraceae (1) | | | | | +--Anaeromyxobacter diazotrophicus (1) | | | +--Firmicutes (9) | | | | | +--Clostridia (3) | | | | | | | +--Thermoanaerobacterales (1) | | | | | | | | | +--Thermoanaerobacteraceae (1) | | | | | | | | | +--Carboxydothermus hydrogenoformans Z-2901 (1) | | | | | | | +--Clostridiales (2) | | | | | | | +--ClostridialesFamilyXVIII.IncertaeSedis (1) | | | | | | | | | +--Symbiobacterium thermophilum IAM 14863 (1) | | | | | | | +--Peptococcaceae (1) | | | | | | | +--Thermincola potens JR (1) | | | | | +--Negativicutes (1) | | | | | | | +--Selenomonadales (1) | | | | | | | +--Veillonellaceae (1) | | | | | | | +--Thermosinus carboxydivorans Nor1 (1) | | | | | +--Bacillales (5) | | | | | +--Bacillaceae (5) | | | | | +--Bacillus subterraneus (1) | | | | | +--Bacillus arseniciselenatis (1) | | | | | +--Bacillus sp. 1NLA3E (1) | | | | | +--Bacillus siralis (2) | | | +--Pseudomonadota (241) | | | | | +--Alphaproteobacteria (81) | | | | | | | +--Hyphomicrobiales (50) | | | | | | | | | +--Pleomorphomonadaceae (1) | | | | | | | | | | | +--Faunimonas pinastri (1) | | | | | | | | | +--Methylocystaceae (5) | | | | | | | | | | | +--Chenggangzhangella methanolivorans (2) | | | | | | | | | | | +--Methylopila (1) | | | | | | | | | | | | | +--Methylopila sp. Yamaguchi (1) | | | | | | | | | | | +--Methylopila turkensis (1) | | | | | | | | | | | +--Hansschlegelia quercus (1) | | | | | | | | | +--Boseaceae (1) | | | | | | | | | | | +--Bosea spartocytisi (1) | | | | | | | | | +--Reyranellaceae (2) | | | | | | | | | | | +--Reyranella soli (2) | | | | | | | | | +--Alsobacteraceae (1) | | | | | | | | | | | +--Alsobacter soli (1) | | | | | | | | | +--Phyllobacteriaceae (7) | | | | | | | | | | | +--Mesorhizobium microcysteis (1) | | | | | | | | | | | +--Phyllobacterium (1) | | | | | | | | | | | | | +--Phyllobacterium sp. YR620 (1) | | | | | | | | | | | +--Pseudaminobacter arsenicus (1) | | | | | | | | | | | +--Mesorhizobium (1) | | | | | | | | | | | | | +--Mesorhizobium sp. L-8-10 (1) | | | | | | | | | | | +--Aquamicrobium (1) | | | | | | | | | | | | | +--Aquamicrobium aerolatum DSM 21857 (1) | | | | | | | | | | | +--Tianweitania populi (1) | | | | | | | | | | | +--Aminobacter (1) | | | | | | | | | | | +--Aminobacter sp. J15 (1) | | | | | | | | | +--Nitrobacteraceae (2) | | | | | | | | | | | +--Tardiphaga (1) | | | | | | | | | | | | | +--Tardiphaga sp. vice352 (1) | | | | | | | | | | | +--Bradyrhizobium (1) | | | | | | | | | | | +--Bradyrhizobium sp. Leo170 (1) | | | | | | | | | +--Rhizobiaceae (3) | | | | | | | | | | | +--Endobacterium cereale (1) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (2) | | | | | | | | | | | +--Rhizobium (2) | | | | | | | | | | | +--Rhizobium sp. BK251 (1) | | | | | | | | | | | +--Rhizobium sp. NFR07 (1) | | | | | | | | | +--Lichenihabitantaceae (1) | | | | | | | | | | | +--Lichenifustis flavocetrariae (1) | | | | | | | | | +--Lichenibacteriaceae (2) | | | | | | | | | | | +--Lichenibacterium ramalinae (1) | | | | | | | | | | | +--Lichenibacterium minor (1) | | | | | | | | | +--Hyphomicrobialesincertaesedis (2) | | | | | | | | | | | +--Vineibacter terrae (1) | | | | | | | | | | | +--Nordella (1) | | | | | | | | | | | +--Nordella sp. HKS 07 (1) | | | | | | | | | +--Hyphomicrobiaceae (1) | | | | | | | | | | | +--Rhodoplanes (1) | | | | | | | | | | | +--Rhodoplanes sp. (1) | | | | | | | | | +--Xanthobacteraceae (8) | | | | | | | | | | | +--Starkeya nomas (1) | | | | | | | | | | | +--Xanthobacter dioxanivorans (1) | | | | | | | | | | | +--Xanthobacter (1) | | | | | | | | | | | | | +--Xanthobacter sp. SG618 (1) | | | | | | | | | | | +--Starkeya (1) | | | | | | | | | | | | | +--Starkeya sp. ORNL1 (1) | | | | | | | | | | | +--Ancylobacter defluvii (1) | | | | | | | | | | | +--Ancylobacter pratisalsi (1) | | | | | | | | | | | +--Aquabacter (1) | | | | | | | | | | | | | +--Aquabacter sp. L1I39 (1) | | | | | | | | | | | +--Ancylobacter (1) | | | | | | | | | | | +--Ancylobacter sp. TS-1 (1) | | | | | | | | | +--Methylobacteriaceae (11) | | | | | | | | | | | +--Methylobacterium oryzihabitans (1) | | | | | | | | | | | +--Enterovirga (1) | | | | | | | | | | | | | +--Enterovirga sp. DB1703 (1) | | | | | | | | | | | +--Enterovirga rhinocerotis (1) | | | | | | | | | | | +--Microvirga mediterraneensis (1) | | | | | | | | | | | +--Methylobacterium (3) | | | | | | | | | | | | | +--Methylobacterium sp. WL8 (1) | | | | | | | | | | | | | +--Methylobacterium sp. GXS13 (1) | | | | | | | | | | | | | +--Methylobacterium sp. BTF04 (1) | | | | | | | | | | | +--Methylobacterium symbioticum (1) | | | | | | | | | | | +--Methylobacterium haplocladii (1) | | | | | | | | | | | +--Microvirga makkahensis (1) | | | | | | | | | | | +--Microvirga alba (1) | | | | | | | | | +--Chelatococcaceae (1) | | | | | | | | | | | +--Chelatococcus reniformis (1) | | | | | | | | | +--Beijerinckiaceae (2) | | | | | | | | | +--Beijerinckia (1) | | | | | | | | | | | +--Beijerinckia sp. 28-YEA-48 (1) | | | | | | | | | +--Beijerinckiaceae bacterium RH AL1 (1) | | | | | | | +--Rhodospirillales (12) | | | | | | | | | +--Acetobacteraceae (7) | | | | | | | | | | | +--Roseococcus (1) | | | | | | | | | | | | | +--Roseococcus sp. SYP-B2431 (1) | | | | | | | | | | | +--Pararoseomonas indoligenes (1) | | | | | | | | | | | +--Roseomonas acroporae (1) | | | | | | | | | | | +--Roseicella aquatilis (1) | | | | | | | | | | | +--Roseicella frigidaeris (1) | | | | | | | | | | | +--Acetobacteraceae bacterium H6797 (1) | | | | | | | | | | | +--Pseudoroseomonas oryzae (1) | | | | | | | | | +--Azospirillaceae (1) | | | | | | | | | | | +--Nitrospirillum (1) | | | | | | | | | | | +--Nitrospirillum amazonense CBAmc (1) | | | | | | | | | +--Rhodospirillales bacterium (1) | | | | | | | | | +--Rhodospirillales bacterium TMPK1 (1) | | | | | | | | | +--Dongiaceae (2) | | | | | | | | | +--Aliidongia dinghuensis (1) | | | | | | | | | +--Hypericibacter adhaerens (1) | | | | | | | +--Rhodobacterales (19) | | | | | | | +--Paracoccaceae (19) | | | | | | | +--Paracoccus aurantiacus (1) | | | | | | | +--Rhodobacter (1) | | | | | | | | | +--Rhodobacter sp. 24-YEA-8 (1) | | | | | | | +--Paracoccus liaowanqingii (1) | | | | | | | +--Paracoccus lutimaris (1) | | | | | | | +--Pseudogemmobacter humi (1) | | | | | | | +--Paracoccus siganidrum (1) | | | | | | | +--Paracoccus salipaludis (1) | | | | | | | +--Amaricoccus (1) | | | | | | | | | +--Amaricoccus sp. HAR-UPW-R2A-40 (1) | | | | | | | +--Paracoccus (3) | | | | | | | | | +--Paracoccus sp. R12_2 (1) | | | | | | | | | +--Paracoccus sp. S-4012 (1) | | | | | | | | | +--Paracoccus sp. S1E-3 (1) | | | | | | | +--Paracoccus suum (1) | | | | | | | +--Paracoccus jeotgali (1) | | | | | | | +--Paracoccus subflavus (1) | | | | | | | +--Paracoccus aestuariivivens (1) | | | | | | | +--Sinirhodobacter populi (1) | | | | | | | +--Paracoccus shanxieyensis (1) | | | | | | | +--Paracoccus amoyensis (1) | | | | | | | +--Amaricoccus solimangrovi (1) | | | | | +--Gammaproteobacteria (62) | | | | | | | +--Methylococcales (2) | | | | | | | | | +--Methylococcaceae (2) | | | | | | | | | +--Methylocaldum marinum (1) | | | | | | | | | +--Methylococcus (1) | | | | | | | | | +--Methylococcus sp. EFPC2 (1) | | | | | | | +--Alteromonadales (2) | | | | | | | | | +--Ferrimonadaceae (1) | | | | | | | | | | | +--Ferrimonas aestuarii (1) | | | | | | | | | +--Shewanellaceae (1) | | | | | | | | | +--Shewanella (1) | | | | | | | | | +--Shewanella sp. SNU WT4 (1) | | | | | | | +--Pasteurellales (6) | | | | | | | | | +--Pasteurellaceae (6) | | | | | | | | | +--Cricetibacter osteomyelitidis (1) | | | | | | | | | +--Vespertiliibacter pulmonis (1) | | | | | | | | | +--Rodentibacter trehalosifermentans (1) | | | | | | | | | +--Mesocricetibacter intestinalis (1) | | | | | | | | | +--Mannheimia (1) | | | | | | | | | | | +--Mannheimia varigena USDA-ARS-USMARC-1296 (1) | | | | | | | | | +--Pasteurellaceae bacterium RH1A (1) | | | | | | | +--Enterobacterales (28) | | | | | | | | | +--Morganellaceae (5) | | | | | | | | | | | +--Providencia (2) | | | | | | | | | | | | | +--Providencia heimbachae ATCC 35613 (2) | | | | | | | | | | | +--Proteus (1) | | | | | | | | | | | | | +--Proteus myxofaciens ATCC 19692 (1) | | | | | | | | | | | +--Arsenophonus (2) | | | | | | | | | | | +--Arsenophonus endosymbiont of Aphis craccivora (1) | | | | | | | | | | | +--Arsenophonus endosymbiont of Aleurodicus floccissimus (1) | | | | | | | | | +--Enterobacteriaceae (14) | | | | | | | | | | | +--Jejubacter calystegiae (2) | | | | | | | | | | | +--Kosakonia (2) | | | | | | | | | | | | | +--Kosakonia cowanii JCM 10956 = DSM 18146 (2) | | | | | | | | | | | +--Citrobacter (1) | | | | | | | | | | | | | +--Citrobacter sp. JGM124 (1) | | | | | | | | | | | +--Kluyvera genomosp. 3 (2) | | | | | | | | | | | +--Enterobacteriaceae bacterium RIT714 (2) | | | | | | | | | | | +--Klebsiella/Raoultellagroup (3) | | | | | | | | | | | | | +--Klebsiella indica (1) | | | | | | | | | | | | | +--Klebsiella (2) | | | | | | | | | | | | | +--Klebsiellapneumoniae (2) | | | | | | | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae (strain HS11286) (2) | | | | | | | | | | | +--Tenebrionibacter/Tenebrionicolagroup (2) | | | | | | | | | | | +--Tenebrionibacter intestinalis (2) | | | | | | | | | +--Budviciaceae (2) | | | | | | | | | | | +--Limnobaculum parvum (2) | | | | | | | | | +--Erwiniaceae (4) | | | | | | | | | | | +--Erwinia sorbitola (1) | | | | | | | | | | | +--Erwiniaceae bacterium PD-1 (1) | | | | | | | | | | | +--Erwinia (1) | | | | | | | | | | | | | +--Erwinia sp. OLSSP12 (1) | | | | | | | | | | | +--[Pantoea] beijingensis (1) | | | | | | | | | +--Enterobacterales bacterium CwR94 (1) | | | | | | | | | +--Hafniaceae (2) | | | | | | | | | +--Enterobacillus tribolii (2) | | | | | | | +--Steroidobacterales (1) | | | | | | | | | +--Steroidobacteraceae (1) | | | | | | | | | +--Steroidobacter agaridevorans (1) | | | | | | | +--Aeromonadales (1) | | | | | | | | | +--Aeromonadaceae (1) | | | | | | | | | +--Oceanisphaera avium (1) | | | | | | | +--Xanthomonadales (7) | | | | | | | | | +--Rhodanobacteraceae (4) | | | | | | | | | | | +--Dyella (2) | | | | | | | | | | | | | +--Dyella sp. OK004 (1) | | | | | | | | | | | | | +--Dyella sp. AD56 (1) | | | | | | | | | | | +--Rhodanobacter (1) | | | | | | | | | | | | | +--Rhodanobacter sp. MP7CTX1 (1) | | | | | | | | | | | +--Dokdonella (1) | | | | | | | | | | | +--Dokdonella sp. (1) | | | | | | | | | +--Xanthomonadaceae (3) | | | | | | | | | +--Pseudoxanthomonas (1) | | | | | | | | | | | +--Pseudoxanthomonas sp. (1) | | | | | | | | | +--Lysobacter silvestris (1) | | | | | | | | | +--Luteimonas granuli (1) | | | | | | | +--Chromatiales (2) | | | | | | | | | +--Ectothiorhodospiraceae (1) | | | | | | | | | | | +--Thioalkalivibrio (1) | | | | | | | | | | | +--Thioalkalivibrio paradoxus ARh 1 (1) | | | | | | | | | +--Chromatiaceae (1) | | | | | | | | | +--Candidatus Thiodictyon syntrophicum (1) | | | | | | | +--Oceanospirillales (2) | | | | | | | | | +--Halomonadaceae (2) | | | | | | | | | +--Halomonas nanhaiensis (1) | | | | | | | | | +--Halomonas (1) | | | | | | | | | +--Halomonas sp. PA5 (1) | | | | | | | +--Pseudomonadales (11) | | | | | | | +--Pseudomonadaceae (11) | | | | | | | +--Stutzerimonas nosocomialis (2) | | | | | | | +--Pseudomonas matsuisoli (1) | | | | | | | +--Pseudomonas oryzae (1) | | | | | | | +--Pseudomonas (5) | | | | | | | | | +--Pseudomonas sp. HLS-6 (1) | | | | | | | | | +--Pseudomonas sp. OIL-1 (1) | | | | | | | | | +--Pseudomonas sp. 1239 (1) | | | | | | | | | +--Pseudomonas sp. C27(2019) (1) | | | | | | | | | +--Pseudomonas sp. THAF187a (1) | | | | | | | +--Pseudomonas cavernae (1) | | | | | | | +--Pseudomonas carbonaria (1) | | | | | +--Betaproteobacteria (98) | | | | | +--Betaproteobacteria bacterium SCN2 (1) | | | | | +--Burkholderiales (80) | | | | | | | +--Burkholderialesgeneraincertaesedis (2) | | | | | | | | | +--Xylophilus rhododendri (1) | | | | | | | | | +--Rhizobacter (1) | | | | | | | | | +--Rhizobacter sp. AJA081-3 (1) | | | | | | | +--Alcaligenaceae (5) | | | | | | | | | +--Pigmentiphaga humi (1) | | | | | | | | | +--Achromobacter kerstersii (1) | | | | | | | | | +--Paracandidimonas soli (1) | | | | | | | | | +--Verticiella sediminum (1) | | | | | | | | | +--Achromobacter (1) | | | | | | | | | +--Achromobacter sp. AONIH1 (1) | | | | | | | +--Burkholderiaceae (31) | | | | | | | | | +--Paraburkholderia lacunae (1) | | | | | | | | | +--Paraburkholderia panacisoli (1) | | | | | | | | | +--Paraburkholderia dinghuensis (1) | | | | | | | | | +--Paraburkholderia caffeinitolerans (1) | | | | | | | | | +--Paraburkholderia eburnea (1) | | | | | | | | | +--Paraburkholderia acidisoli (2) | | | | | | | | | +--Caballeronia novacaledonica (1) | | | | | | | | | +--Burkholderia (1) | | | | | | | | | | | +--Burkholderia sp. WAC0059 (1) | | | | | | | | | +--Trinickia fusca (1) | | | | | | | | | +--Paraburkholderia monticola (1) | | | | | | | | | +--Paraburkholderia ultramafica (2) | | | | | | | | | +--Cupriavidus agavae (1) | | | | | | | | | +--Paraburkholderia (7) | | | | | | | | | | | +--Paraburkholderia sp. LEh10 (3) | | | | | | | | | | | +--Paraburkholderia sp. BL23I1N1 (1) | | | | | | | | | | | +--Paraburkholderia sp. BL10I2N1 (1) | | | | | | | | | | | +--Paraburkholderia sp. DHOC27 (2) | | | | | | | | | +--Caballeronia (1) | | | | | | | | | | | +--Caballeronia sp. SBC1 (1) | | | | | | | | | +--Paraburkholderia fynbosensis (1) | | | | | | | | | +--Paraburkholderia steynii (2) | | | | | | | | | +--Paraburkholderia saeva (1) | | | | | | | | | +--Paraburkholderia tagetis (1) | | | | | | | | | +--Caballeronia concitans (1) | | | | | | | | | +--Pararobbsia silviterrae (1) | | | | | | | | | +--Paraburkholderia acidiphila (1) | | | | | | | | | +--Chitinasiproducens palmae (1) | | | | | | | +--Oxalobacteraceae (12) | | | | | | | | | +--Undibacterium terreum (1) | | | | | | | | | +--Undibacterium jejuense (1) | | | | | | | | | +--Herbaspirillum (1) | | | | | | | | | | | +--Herbaspirillum sp. SJZ107 (1) | | | | | | | | | +--Telluriagroup (6) | | | | | | | | | | | +--Rugamonas rivuli (1) | | | | | | | | | | | +--Rugamonas brunnea (1) | | | | | | | | | | | +--Duganella fentianensis (1) | | | | | | | | | | | +--Massilia forsythiae (1) | | | | | | | | | | | +--Duganella (2) | | | | | | | | | | | +--Duganella sp. CF517 (1) | | | | | | | | | | | +--Duganella sp. 1224 (1) | | | | | | | | | +--Glaciimonas soli (1) | | | | | | | | | +--Glaciimonas (1) | | | | | | | | | | | +--Glaciimonas sp. PCH181 (1) | | | | | | | | | +--Sapientia aquatica (1) | | | | | | | +--Sphaerotilaceae (6) | | | | | | | | | +--Piscinibacter (1) | | | | | | | | | | | +--Piscinibacter sp. HJYY11 (1) | | | | | | | | | +--Ideonella (1) | | | | | | | | | | | +--Ideonella sp. MAG2 (1) | | | | | | | | | +--Roseateles (4) | | | | | | | | | +--Roseateles sp. DAIF2 (1) | | | | | | | | | +--Mitsuaria sp. PDC51 (1) | | | | | | | | | +--Paucibacter sp. KBW04 (1) | | | | | | | | | +--Pelomonas sp. HMWF004 (1) | | | | | | | +--Comamonadaceae (24) | | | | | | | +--Oryzisolibacter propanilivorax (1) | | | | | | | +--Ottowia (1) | | | | | | | | | +--Ottowia sp. GY511 (1) | | | | | | | +--Variovorax (3) | | | | | | | | | +--Variovorax sp. PDC80 (1) | | | | | | | | | +--Variovorax sp. Sphag1AA (1) | | | | | | | | | +--Variovorax sp. PAMC28562 (1) | | | | | | | +--Vandammella animalimorsus (1) | | | | | | | +--Pulveribacter suum (1) | | | | | | | +--Variovorax gossypii (1) | | | | | | | +--Lampropedia aestuarii (1) | | | | | | | +--Brachymonas (1) | | | | | | | | | +--Brachymonas denitrificans DSM 15123 (1) | | | | | | | +--Ottowia testudinis (1) | | | | | | | +--Comamonas suwonensis (1) | | | | | | | +--Lampropedia puyangensis (1) | | | | | | | +--Diaphorobacter (1) | | | | | | | | | +--Diaphorobacter sp. HDW4B (1) | | | | | | | +--Diaphorobacter ruginosibacter (1) | | | | | | | +--Acidovorax (1) | | | | | | | | | +--Acidovorax sp. HDW3 (1) | | | | | | | +--Melaminivora alkalimesophila (1) | | | | | | | +--Ramlibacter agri (1) | | | | | | | +--Comamonas (2) | | | | | | | | | +--Comamonas sp. 26 (1) | | | | | | | | | +--Comamonas sp. JNW (1) | | | | | | | +--Diaphorobacter aerolatus (1) | | | | | | | +--Comamonas antarctica (1) | | | | | | | +--Ottowia oryzae (1) | | | | | | | +--Caenimonas (1) | | | | | | | +--Caenimonas koreensis DSM 17982 (1) | | | | | +--Rhodocyclales (6) | | | | | | | +--Rhodocyclaceae (1) | | | | | | | | | +--Oryzomicrobium terrae (1) | | | | | | | +--Azonexaceae (1) | | | | | | | | | +--Dechloromonas (1) | | | | | | | | | +--Dechloromonas sp. HYN0024 (1) | | | | | | | +--Zoogloeaceae (4) | | | | | | | +--Pseudothauera nasutitermitis (1) | | | | | | | +--Thauera (1) | | | | | | | | | +--Thauera sp. K11 (1) | | | | | | | +--Pseudothauera rhizosphaerae (1) | | | | | | | +--Zoogloea dura (1) | | | | | +--Betaproteobacteria bacterium SCN1 (1) | | | | | +--Neisseriales (3) | | | | | | | +--Chromobacteriaceae (1) | | | | | | | | | +--Aquitalea (1) | | | | | | | | | +--Aquitalea sp. FJL05 (1) | | | | | | | +--Neisseriaceae (2) | | | | | | | +--Crenobacter intestini (1) | | | | | | | +--Craterilacuibacter sinensis (1) | | | | | +--Nitrosomonadales (7) | | | | | +--Methylophilaceae (1) | | | | | | | +--Novimethylophilus kurashikiensis (1) | | | | | +--Sterolibacteriaceae (2) | | | | | | | +--Sulfurisoma sediminicola (1) | | | | | | | +--Denitratisoma (1) | | | | | | | +--Denitratisoma sp. DHT3 (1) | | | | | +--Usitatibacteraceae (1) | | | | | | | +--Usitatibacter rugosus (1) | | | | | +--Sulfuricellaceae (3) | | | | | +--Sulfuricella (1) | | | | | | | +--Sulfuricella sp. (1) | | | | | +--Sulfurimicrobium lacus (1) | | | | | +--Sulfuriferula (1) | | | | | +--Sulfuriferula sp. AH1 (1) | | | +--Acidobacteriota (1) | | | | | +--Terriglobia (1) | | | | | +--CandidatusAcidoferrales (1) | | | | | +--Candidatus Acidoferrum panamensis (1) | | | +--Thermodesulfobacteriota (3) | | | | | +--Desulfobulbia (1) | | | | | | | +--Desulfobulbales (1) | | | | | | | +--Desulfobulbaceae (1) | | | | | | | +--Desulfobulbus oligotrophicus (1) | | | | | +--Desulfuromonadia (2) | | | | | +--Geobacterales (2) | | | | | +--Geobacteraceae (2) | | | | | +--Geomesophilobacter sediminis (1) | | | | | +--Oryzomonas rubra (1) | | | +--Terrabacteriagroup (21) | | | +--Actinomycetota (5) | | | | | +--Nitriliruptoria (1) | | | | | | | +--Nitriliruptorales (1) | | | | | | | +--Nitriliruptorales bacterium (1) | | | | | +--Actinomycetes (4) | | | | | +--Micromonosporales (2) | | | | | | | +--Micromonosporaceae (2) | | | | | | | +--Rhizocola hellebori (1) | | | | | | | +--Micromonosporaceae bacterium (1) | | | | | +--Pseudonocardiales (1) | | | | | | | +--Pseudonocardiaceae (1) | | | | | | | +--Actinophytocola (1) | | | | | | | +--Actinophytocola sp. (1) | | | | | +--Streptosporangiales (1) | | | | | +--Streptosporangiales bacterium (1) | | | +--Firmicutes (6) | | | | | +--Clostridia (1) | | | | | | | +--Clostridiales (1) | | | | | | | +--Clostridialesincertaesedis (1) | | | | | | | +--ClostridialesFamilyXVI.IncertaeSedis (1) | | | | | | | +--Carboxydocella (1) | | | | | | | +--Carboxydocella sporoproducens DSM 16521 (1) | | | | | +--Bacilli (5) | | | | | +--Bacillales (5) | | | | | +--Bacillaceae (4) | | | | | | | +--Anaerobacillus sp. NB2006 (1) | | | | | | | +--Bacillus (3) | | | | | | | +--Bacillus azotoformans LMG 9581 (1) | | | | | | | +--Bacillus vireti LMG 21834 (1) | | | | | | | +--Bacillus bataviensis LMG 21833 (1) | | | | | +--unclassifiedBacillales (1) | | | | | +--Desulfuribacillus stibiiarsenatis (1) | | | +--Bacillota (10) | | | +--Bacilli (10) | | | +--Bacillales (10) | | | +--Bacillaceae (9) | | | | | +--Anaerobacillus alkaliphilus (1) | | | | | +--Neobacillus mesonae (1) | | | | | +--Bacillus (1) | | | | | | | +--Bacillus sp. DNRA2 (1) | | | | | +--Pseudoneobacillus rhizosphaerae (1) | | | | | +--Cerasibacillus terrae (1) | | | | | +--Lentibacillus cibarius (1) | | | | | +--Tepidibacillus (1) | | | | | | | +--Tepidibacillus sp. HK-1 (1) | | | | | +--Cytobacillus solani (1) | | | | | +--Niallia endozanthoxylica (1) | | | +--Alicyclobacillaceae (1) | | | +--Effusibacillus lacus (1) | +--metsulfuron-methyl degrading bacterium S113 (1)