# Species tree for RF01831 # Generated from Rfam version 15.00 | +--Eukaryota (3) | | | +--Metazoa (2) | | | | | +--Chordata (1) | | | | | | | +--Craniata (1) | | | | | | | +--Vertebrata (1) | | | | | | | +--Euteleostomi (1) | | | | | | | +--Mammalia (1) | | | | | | | +--Eutheria (1) | | | | | | | +--Laurasiatheria (1) | | | | | | | +--Cetartiodactyla (1) | | | | | | | +--Ruminantia (1) | | | | | | | +--Pecora (1) | | | | | | | +--Moschidae (1) | | | | | | | +--Moschus moschiferus (Siberian musk deer) (1) | | | | | +--Arthropoda (1) | | | | | +--Hexapoda (1) | | | | | +--Insecta (1) | | | | | +--Pterygota (1) | | | | | +--Neoptera (1) | | | | | +--Endopterygota (1) | | | | | +--Diptera (1) | | | | | +--Brachycera (1) | | | | | +--Muscomorpha (1) | | | | | +--Ephydroidea (1) | | | | | +--Drosophilidae (1) | | | | | +--Drosophila (1) | | | | | +--Drosophila kikkawai (1) | | | +--Fungi (1) | | | +--Dikarya (1) | | | +--Ascomycota (1) | | | +--Saccharomycotina (1) | | | +--Saccharomycetes (1) | | | +--Saccharomycetales (1) | | | +--Saccharomycetalesincertaesedis (1) | | | +--Ogataea polymorpha (1) | +--alkaliphilic bacterium Su22 (1) | +--Bacteria (760) | | | +--Bacteroidetes (4) | | | | | +--Bacteroidia (4) | | | | | +--Bacteroidales (4) | | | | | +--Bacteroidaceae (4) | | | | | +--Bacteroides xylanolyticus (1) | | | | | +--Bacteroides coagulans (2) | | | | | +--Acetomicrobium faecale (1) | | | +--bacterium D16-54 (1) | | | +--bacterium 1XD21-70 (1) | | | +--Tenericutes (6) | | | | | +--Mollicutes (6) | | | | | +--Anaeroplasmatales (1) | | | | | | | +--Anaeroplasmataceae (1) | | | | | | | +--Anaeroplasma bactoclasticum (1) | | | | | +--Acholeplasmatales (5) | | | | | +--Acholeplasmataceae (5) | | | | | +--Acholeplasma oculi (1) | | | | | +--Acholeplasma laidlawii PG-8A (1) | | | | | +--Acholeplasma brassicae (1) | | | | | +--Acholeplasma hippikon (1) | | | | | +--Acholeplasma axanthum (1) | | | +--Thermotogae (2) | | | | | +--Thermotogales (1) | | | | | | | +--Thermotogaceae (1) | | | | | | | +--Geotoga petraea (1) | | | | | +--Thermotogales bacterium OCT74 (1) | | | +--bacterium 1XD42-54 (2) | | | +--Atribacterota (1) | | | | | +--Candidatus Atribacteria bacterium MT.SAG.1 (1) | | | +--Haloplasmatales (1) | | | | | +--Haloplasmataceae (1) | | | | | +--Haloplasma contractile SSD-17B (1) | | | +--Synergistota (2) | | | | | +--Synergistia (2) | | | | | +--Synergistales (2) | | | | | +--Aminobacteriaceae (1) | | | | | | | +--Fretibacterium (1) | | | | | | | +--Fretibacterium sp. OH1220_COT-178 (1) | | | | | +--Dethiosulfovibrionaceae (1) | | | | | +--Pyramidobacter (1) | | | | | +--Pyramidobacter sp. CG50-2 (1) | | | +--Proteobacteria (1) | | | | | +--Alphaproteobacteria (1) | | | | | +--Rhizobiales (1) | | | | | +--Hyphomicrobiaceae (1) | | | | | +--Gemmiger formicilis (1) | | | +--Spirochaetes (1) | | | | | +--Spirochaetia (1) | | | | | +--Spirochaetales (1) | | | | | +--Spirochaetaceae (1) | | | | | +--Treponema (1) | | | | | +--Treponema pedis str. T A4 (1) | | | +--Firmicutes (234) | | | | | +--Clostridia (134) | | | | | | | +--Thermoanaerobacterales (1) | | | | | | | | | +--Thermoanaerobacteraceae (1) | | | | | | | | | +--Tepidanaerobacter syntrophicus (1) | | | | | | | +--Halanaerobiales (7) | | | | | | | | | +--Halanaerobiaceae (5) | | | | | | | | | | | +--Halothermothrix orenii H 168 (1) | | | | | | | | | | | +--Halanaerobium hydrogeniformans (1) | | | | | | | | | | | +--Halanaerobium salsuginis (1) | | | | | | | | | | | +--Halanaerobium praevalens DSM 2228 (1) | | | | | | | | | | | +--Halarsenatibacter silvermanii (1) | | | | | | | | | +--Halobacteroidaceae (2) | | | | | | | | | +--Orenia marismortui (2) | | | | | | | +--Natranaerobiales (4) | | | | | | | | | +--Natranaerobiaceae (4) | | | | | | | | | +--Natranaerobius trueperi (2) | | | | | | | | | +--Natranaerobius thermophilus JW/NM-WN-LF (2) | | | | | | | +--Clostridiales bacterium 9401234 (1) | | | | | | | +--Clostridiales (121) | | | | | | | +--ClostridialesFamilyXII.IncertaeSedis (1) | | | | | | | | | +--Fusibacter sp. 3-D3-R-P8ASC2010 (1) | | | | | | | +--Eubacteriaceae bacterium WN037 (1) | | | | | | | +--Clostridiaceae bacterium SN021 (1) | | | | | | | +--Peptostreptococcaceae (1) | | | | | | | | | +--Filifactor alocis ATCC 35896 (1) | | | | | | | +--Lachnospiraceae bacterium 9_1_43BFAA (1) | | | | | | | +--Eubacteriaceae (13) | | | | | | | | | +--Anaerofustis stercorihominis DSM 17244 (1) | | | | | | | | | +--Eubacterium limosum KIST612 (2) | | | | | | | | | +--Pseudoramibacter alactolyticus ATCC 23263 (1) | | | | | | | | | +--Eubacterium pyruvativorans (1) | | | | | | | | | +--Alkalibaculum bacchi (1) | | | | | | | | | +--Acetobacterium paludosum (2) | | | | | | | | | +--Acetobacterium bakii (2) | | | | | | | | | +--Eubacterium aggregans (2) | | | | | | | | | +--Eubacterium eligens ATCC 27750 (1) | | | | | | | +--Lachnospiraceae (14) | | | | | | | | | +--Marvinbryantia formatexigens DSM 14469 (2) | | | | | | | | | +--Roseburia hominis A2-183 (1) | | | | | | | | | +--Catonella morbi ATCC 51271 (1) | | | | | | | | | +--Pseudobutyrivibrio ruminis (1) | | | | | | | | | +--Butyrivibrio hungatei (1) | | | | | | | | | +--Oribacterium sinus F0268 (1) | | | | | | | | | +--Clostridium lentocellum DSM 5427 (1) | | | | | | | | | +--Butyrivibrio proteoclasticus B316 (1) | | | | | | | | | +--Butyrivibrio fibrisolvens (1) | | | | | | | | | +--Lachnospira multipara (1) | | | | | | | | | +--Johnsonella ignava ATCC 51276 (2) | | | | | | | | | +--Shuttleworthia satelles DSM 14600 (1) | | | | | | | +--Blautia wexlerae (2) | | | | | | | +--Ruminococcaceae (14) | | | | | | | | | +--Ruminococcus obeum (1) | | | | | | | | | +--Hydrogenoanaerobacterium saccharovorans (1) | | | | | | | | | +--Anaerotruncus colihominis (1) | | | | | | | | | +--Ruminococcus albus 8 (2) | | | | | | | | | +--Ruminococcaceae bacterium D16 (2) | | | | | | | | | +--Ethanoligenens harbinense YUAN-3 (1) | | | | | | | | | +--Faecalibacterium prausnitzii A2-165 (1) | | | | | | | | | +--Ruminococcus sp. YE71 (2) | | | | | | | | | +--Faecalibacterium prausnitzii L2-6 (1) | | | | | | | | | +--Subdoligranulum variabile DSM 15176 (1) | | | | | | | | | +--Acetanaerobacterium elongatum (1) | | | | | | | +--Blautia luti (1) | | | | | | | +--Lachnospiraceae bacterium 3_1_57FAA_CT1 (1) | | | | | | | +--ClostridialesFamilyXI.IncertaeSedis (13) | | | | | | | | | +--Peptoniphilus ivorii (1) | | | | | | | | | +--Peptoniphilus lacrimalis 315-B (1) | | | | | | | | | +--Helcococcus ovis (1) | | | | | | | | | +--Finegoldia magna ATCC 29328 (1) | | | | | | | | | +--Anaerococcus prevotii ACS-065-V-Col13 (1) | | | | | | | | | +--Anaerococcus lactolyticus ATCC 51172 (1) | | | | | | | | | +--Anaerococcus vaginalis ATCC 51170 (1) | | | | | | | | | +--Parvimonas micra (1) | | | | | | | | | +--Peptoniphilus sp. RMA 16757 (1) | | | | | | | | | +--Sporanaerobacter sp. C5BEL (1) | | | | | | | | | +--Peptoniphilus sp. oral taxon 386 str. F0131 (3) | | | | | | | +--Clostridiaceae bacterium FH042 (1) | | | | | | | +--Proteiniborus ethanoligenes (1) | | | | | | | +--Clostridiaceae (48) | | | | | | | | | +--Clostridium sp. D3RC-2 (1) | | | | | | | | | +--Clostridium ljungdahlii (1) | | | | | | | | | +--Clostridium saccharolyticum WM1 (4) | | | | | | | | | +--Clostridium tetani E88 (1) | | | | | | | | | +--Clostridium carboxidivorans P7 (1) | | | | | | | | | +--Clostridium bolteae ATCC BAA-613 (1) | | | | | | | | | +--Clostridium methylpentosum DSM 5476 (1) | | | | | | | | | +--Clostridium fallax (1) | | | | | | | | | +--Clostridium cellulosi (1) | | | | | | | | | +--Clostridium cellulolyticum H10 (1) | | | | | | | | | +--Clostridium uliginosum (1) | | | | | | | | | +--Tindallia californiensis (1) | | | | | | | | | +--Clostridium thermosuccinogenes (1) | | | | | | | | | +--Clostridium hathewayi (1) | | | | | | | | | +--Clostridium saccharoperbutylacetonicum ATCC 27021 (1) | | | | | | | | | +--Clostridium lavalense (1) | | | | | | | | | +--Clostridium sticklandii DSM 519 (1) | | | | | | | | | +--Clostridium purinilyticum (1) | | | | | | | | | +--Clostridium hathewayi WAL-18680 (1) | | | | | | | | | +--Clostridium sp. BS-1 (1) | | | | | | | | | +--Oxobacter pfennigii (2) | | | | | | | | | +--Clostridium tetanomorphum (1) | | | | | | | | | +--Clostridium sulfidigenes (1) | | | | | | | | | +--Clostridium novyi NT (1) | | | | | | | | | +--Clostridium acetobutylicum ATCC 824 (1) | | | | | | | | | +--Clostridium kluyveri DSM 555 (2) | | | | | | | | | +--Clostridium aminobutyricum (1) | | | | | | | | | +--Clostridium taeniosporum (1) | | | | | | | | | +--Clostridium hungatei (1) | | | | | | | | | +--Clostridium neonatale (1) | | | | | | | | | +--Clostridium aminophilum (1) | | | | | | | | | +--Clostridium cadaveris (1) | | | | | | | | | +--Alkaliphilus oremlandii OhILAs (1) | | | | | | | | | +--Clostridium algidixylanolyticum (1) | | | | | | | | | +--Clostridium fimetarium (1) | | | | | | | | | +--Alkaliphilus metalliredigens QYMF (2) | | | | | | | | | +--Clostridium aminovalericum (1) | | | | | | | | | +--Clostridium caenicola (1) | | | | | | | | | +--Clostridium symbiosum WAL-14163 (2) | | | | | | | | | +--Clostridium neopropionicum (1) | | | | | | | | | +--Clostridium botulinum A str. ATCC 3502 (1) | | | | | | | +--Christensenellaceae (1) | | | | | | | | | +--Christensenella minuta (1) | | | | | | | +--Syntrophomonadaceae (1) | | | | | | | | | +--Dethiobacter alkaliphilus AHT 1 (1) | | | | | | | +--Pseudoflavonifractor capillosus ATCC 29799 (1) | | | | | | | +--Lachnospiraceae bacterium 2_1_46FAA (1) | | | | | | | +--Catabacteriaceae (1) | | | | | | | | | +--Catabacter hongkongensis (1) | | | | | | | +--Lachnospiraceae bacterium A4 (1) | | | | | | | +--Lachnospiraceae bacterium 28-4 (1) | | | | | | | +--Lachnospiraceae bacterium 5_1_57FAA (1) | | | | | +--Lactobacillales (84) | | | | | | | +--Weissella sp. LMG 26217 (1) | | | | | | | +--Weissella paramesenteroides ATCC 33313 (1) | | | | | | | +--Weissella kandleri (1) | | | | | | | +--Weissella cibaria (1) | | | | | | | +--Lactobacillaceae (20) | | | | | | | | | +--Sharpea azabuensis (1) | | | | | | | | | +--Paralactobacillus selangorensis (1) | | | | | | | | | +--Lactobacillus farciminis (1) | | | | | | | | | +--Pediococcus stilesii (1) | | | | | | | | | +--Lactobacillus reuteri DSM 20016 (1) | | | | | | | | | +--Lactobacillus kunkeei (1) | | | | | | | | | +--Lactobacillus malefermentans (1) | | | | | | | | | +--Lactobacillus casei ATCC 334 (1) | | | | | | | | | +--Lactobacillus ruminis ATCC 27782 (1) | | | | | | | | | +--Pediococcus argentinicus (1) | | | | | | | | | +--Pediococcus acidilactici DSM 20284 (1) | | | | | | | | | +--Lactobacillus pobuzihii (1) | | | | | | | | | +--Lactobacillus sakei subsp. sakei 23K (1) | | | | | | | | | +--Lactobacillus salivarius UCC118 (1) | | | | | | | | | +--Lactobacillus brevis ATCC 367 (1) | | | | | | | | | +--Lactobacillus sanfranciscensis TMW 1.1304 (1) | | | | | | | | | +--Lactobacillus backi (1) | | | | | | | | | +--Lactobacillus secaliphilus (1) | | | | | | | | | +--Lactobacillus fructivorans (1) | | | | | | | | | +--Lactobacillus coleohominis 101-4-CHN (1) | | | | | | | +--Streptococcaceae (11) | | | | | | | | | +--Streptococcus sp. ERD01G (1) | | | | | | | | | +--Streptococcus sp. CSL 7508 (1) | | | | | | | | | +--Lactococcus garvieae Lg2 (1) | | | | | | | | | +--Streptococcus mutans UA159 (1) | | | | | | | | | +--Streptococcus ferus (1) | | | | | | | | | +--Lactovum miscens (1) | | | | | | | | | +--Streptococcus suis BM407 (1) | | | | | | | | | +--Streptococcus minor (1) | | | | | | | | | +--Streptococcus pasteurianus ATCC 43144 (1) | | | | | | | | | +--Streptococcus pluranimalium (1) | | | | | | | | | +--Streptococcus uberis 0140J (1) | | | | | | | +--Enterococcaceae (21) | | | | | | | | | +--Pilibacter termitis (1) | | | | | | | | | +--Enterococcus ratti (1) | | | | | | | | | +--Vagococcus elongatus (2) | | | | | | | | | +--Enterococcus aquimarinus (1) | | | | | | | | | +--Vagococcus fluvialis (1) | | | | | | | | | +--Enterococcus italicus DSM 15952 (1) | | | | | | | | | +--Enterococcus faecalis V583 (1) | | | | | | | | | +--Vagococcus sp. AC-1 (1) | | | | | | | | | +--Melissococcus plutonius ATCC 35311 (1) | | | | | | | | | +--Enterococcus sp. HAMBI 3055 (1) | | | | | | | | | +--Enterococcus casseliflavus EC20 (1) | | | | | | | | | +--Vagococcus fessus (1) | | | | | | | | | +--Enterococcus canis (1) | | | | | | | | | +--Enterococcus hermanniensis (1) | | | | | | | | | +--Enterococcus thailandicus (2) | | | | | | | | | +--Vagococcus salmoninarum (1) | | | | | | | | | +--Vagococcus carniphilus (1) | | | | | | | | | +--Enterococcus hirae ATCC 9790 (1) | | | | | | | | | +--Vagococcus teuberi (1) | | | | | | | +--Fructobacillus durionis (1) | | | | | | | +--Carnobacteriaceae (11) | | | | | | | | | +--Granulicatella balaenopterae (1) | | | | | | | | | +--Carnobacterium sp. LMG 26642 (1) | | | | | | | | | +--Isobaculum melis (1) | | | | | | | | | +--Granulicatella elegans ATCC 700633 (1) | | | | | | | | | +--Alkalibacterium pelagium (1) | | | | | | | | | +--Alkalibacterium kapii (1) | | | | | | | | | +--Carnobacteriaceae bacterium C01 (1) | | | | | | | | | +--Desemzia incerta (1) | | | | | | | | | +--Trichococcus sp. EX-07 (1) | | | | | | | | | +--Granulicatella adiacens ATCC 49175 (1) | | | | | | | | | +--Carnobacterium sp. 17-4 (1) | | | | | | | +--Weissella viridescens (1) | | | | | | | +--Weissella sp. 1119-1A-09 (1) | | | | | | | +--Leuconostoc fallax (1) | | | | | | | +--Fructobacillus pseudoficulneus (1) | | | | | | | +--Weissella soli (1) | | | | | | | +--Aerococcaceae (10) | | | | | | | | | +--Aerococcus urinaehominis (1) | | | | | | | | | +--Aerococcus urinae ACS-120-V-Col10a (1) | | | | | | | | | +--Eremococcus coleocola ACS-139-V-Col8 (1) | | | | | | | | | +--Facklamia miroungae (3) | | | | | | | | | +--Abiotrophia defectiva ATCC 49176 (1) | | | | | | | | | +--Aerococcus christensenii (1) | | | | | | | | | +--Ignavigranum ruoffiae (2) | | | | | | | +--Weissella koreensis (1) | | | | | +--Negativicutes (7) | | | | | | | +--Selenomonadales (7) | | | | | | | +--Veillonellaceae (7) | | | | | | | +--Selenomonas bovis (1) | | | | | | | +--Mitsuokella jalaludinii (1) | | | | | | | +--Pectinatus cerevisiiphilus (1) | | | | | | | +--Propionispora vibrioides (1) | | | | | | | +--Propionispira arboris (1) | | | | | | | +--Megamonas hypermegale (1) | | | | | | | +--Pectinatus sp. TY (1) | | | | | +--Bacillales (3) | | | | | | | +--Sporolactobacillaceae (3) | | | | | | | +--Sporolactobacillus inulinus (1) | | | | | | | +--Sporolactobacillus putidus (1) | | | | | | | +--Sporolactobacillus inulinus CASD (1) | | | | | +--Erysipelotrichi (6) | | | | | +--Erysipelotrichales (6) | | | | | +--Erysipelotrichaceae (4) | | | | | | | +--Erysipelothrix inopinata (1) | | | | | | | +--Holdemania filiformis (1) | | | | | | | +--Allobaculum sp. GK12 (1) | | | | | | | +--Erysipelothrix rhusiopathiae ATCC 19414 (1) | | | | | +--Erysipelotrichaceae bacterium 5_2_54FAA (1) | | | | | +--Streptococcus pleomorphus (1) | | | +--Synergistetes bacterium SGP1 (1) | | | +--Synergistetes (1) | | | | | +--Synergistia (1) | | | | | +--Synergistales (1) | | | | | +--Synergistaceae (1) | | | | | +--Aminobacterium colombiense DSM 12261 (1) | | | +--bacterium 1XD42-8 (2) | | | +--bacterium 1xD42-67 (1) | | | +--endosymbiont 'TC1' of Trimyema compressum (1) | | | +--Terrabacteriagroup (497) | | | | | +--Tenericutes (3) | | | | | | | +--Candidatus Izimaplasma sp. HR1 (1) | | | | | | | +--Mollicutes (1) | | | | | | | | | +--Acholeplasmatales (1) | | | | | | | | | +--Acholeplasmataceae (1) | | | | | | | | | +--Acholeplasma (1) | | | | | | | | | +--Acholeplasma palmae J233 (1) | | | | | | | +--Candidatus Izimaplasma sp. HR2 (1) | | | | | +--Mycoplasmatota (6) | | | | | | | +--Mycoplasmatota bacterium (1) | | | | | | | +--Mollicutes (3) | | | | | | | | | +--Mycoplasmatales (2) | | | | | | | | | | | +--Mycoplasmataceae (2) | | | | | | | | | | | +--Mycoplasma todarodis (1) | | | | | | | | | | | +--Mycoplasma marinum (1) | | | | | | | | | +--Acholeplasmatales (1) | | | | | | | | | +--Acholeplasmataceae (1) | | | | | | | | | +--Mariniplasma anaerobium (1) | | | | | | | +--CandidatusIzimaplasma (2) | | | | | | | +--Candidatus Izimaplasma bacterium ZiA1 (1) | | | | | | | +--CandidatusIzemoplasmatales (1) | | | | | | | +--CandidatusIzemoplasmataceae (1) | | | | | | | +--Xianfuyuplasma coldseepsis (1) | | | | | +--Firmicutes (232) | | | | | | | +--Firmicutes bacterium CAG:170 (1) | | | | | | | +--Firmicutes bacterium CAG:176 (1) | | | | | | | +--Firmicutes bacterium CAG:308 (1) | | | | | | | +--Firmicutes bacterium CAG:103 (1) | | | | | | | +--Firmicutes bacterium CAG:124 (1) | | | | | | | +--unclassifiedFirmicutessensustricto (2) | | | | | | | | | +--Firmicutes bacterium ASF500 (1) | | | | | | | | | +--Firmicutes bacterium M10-2 (1) | | | | | | | +--Firmicutes bacterium CAG:646 (1) | | | | | | | +--Erysipelotrichia (5) | | | | | | | | | +--Erysipelotrichales (5) | | | | | | | | | +--Erysipelotrichaceae (5) | | | | | | | | | +--Faecalibaculum rodentium (1) | | | | | | | | | +--Dubosiella newyorkensis (1) | | | | | | | | | +--Kandleria (1) | | | | | | | | | | | +--Kandleria vitulina DSM 20405 (1) | | | | | | | | | +--Erysipelatoclostridium (1) | | | | | | | | | | | +--[Clostridium] innocuum 2959 (1) | | | | | | | | | +--Erysipelothrix larvae (1) | | | | | | | +--Firmicutes bacterium CAG:137 (2) | | | | | | | +--Negativicutes (3) | | | | | | | | | +--Selenomonadales (1) | | | | | | | | | | | +--Sporomusaceae (1) | | | | | | | | | | | +--Anaerosporomusa subterranea (1) | | | | | | | | | +--Veillonellales (2) | | | | | | | | | +--Veillonellaceae (2) | | | | | | | | | +--Dialister (2) | | | | | | | | | +--Dialister succinatiphilus YIT 11850 (1) | | | | | | | | | +--Dialister sp. CAG:486 (1) | | | | | | | +--Firmicutes bacterium CAG:424 (1) | | | | | | | +--Firmicutes bacterium CAG:227 (1) | | | | | | | +--Firmicutes bacterium CAG:475 (1) | | | | | | | +--Firmicutes bacterium CAG:536 (1) | | | | | | | +--Firmicutes bacterium CAG:110 (1) | | | | | | | +--Firmicutes bacterium CAG:41 (1) | | | | | | | +--Firmicutes bacterium CAG:145 (1) | | | | | | | +--Firmicutes bacterium CAG:272 (1) | | | | | | | +--Clostridia (112) | | | | | | | | | +--Thermoanaerobacterales (1) | | | | | | | | | | | +--Thermoanaerobacteraceae (1) | | | | | | | | | | | +--Tepidanaerobacter (1) | | | | | | | | | | | +--Tepidanaerobacter acetatoxydans Re1 (1) | | | | | | | | | +--Halanaerobiales (1) | | | | | | | | | | | +--Halanaerobiaceae (1) | | | | | | | | | | | +--Halanaerobium (1) | | | | | | | | | | | +--Halanaerobiumsaccharolyticum (1) | | | | | | | | | | | +--Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 (1) | | | | | | | | | +--Clostridiales (110) | | | | | | | | | +--Clostridialesincertaesedis (3) | | | | | | | | | | | +--ClostridialesFamilyXIII.IncertaeSedis (3) | | | | | | | | | | | +--Eubacterium infirmum F0142 (1) | | | | | | | | | | | +--Clostridiales bacterium S5-A14a (1) | | | | | | | | | | | +--Eubacterium brachy ATCC 33089 (1) | | | | | | | | | +--Ruminococcaceae (22) | | | | | | | | | | | +--Ruminococcaceae bacterium CPB6 (1) | | | | | | | | | | | +--Sporobacter (1) | | | | | | | | | | | | | +--Sporobacter termitidis DSM 10068 (1) | | | | | | | | | | | +--Faecalibacterium (3) | | | | | | | | | | | | | +--Faecalibacterium sp. CAG:74 (1) | | | | | | | | | | | | | +--Faecalibacterium sp. CAG:1138 (1) | | | | | | | | | | | | | +--Faecalibacterium sp. CAG:82 (1) | | | | | | | | | | | +--Ruminiclostridium (2) | | | | | | | | | | | | | +--[Clostridium] termitidis CT1112 (1) | | | | | | | | | | | | | +--[Clostridium]stercorarium (1) | | | | | | | | | | | | | +--[Clostridium] stercorarium subsp. stercorarium DSM 8532 (1) | | | | | | | | | | | +--Anaerotruncus sp. G3(2012) (1) | | | | | | | | | | | +--Papillibacter (1) | | | | | | | | | | | | | +--Papillibacter cinnamivorans DSM 12816 (1) | | | | | | | | | | | +--Subdoligranulum (1) | | | | | | | | | | | | | +--Subdoligranulum sp. CAG:314 (1) | | | | | | | | | | | +--Ruminococcus (12) | | | | | | | | | | | +--Ruminococcus sp. CAG:330 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:254 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:382 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:353 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:403 (1) | | | | | | | | | | | +--Ruminococcus flavefaciens 007c (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:579 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:563 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:724 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:108 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:57 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:624 (1) | | | | | | | | | +--Lachnospiraceae (31) | | | | | | | | | | | +--Blautia sp. An249 (2) | | | | | | | | | | | +--Lachnospiraceae bacterium (1) | | | | | | | | | | | +--Blautia sp. An46 (1) | | | | | | | | | | | +--Blautia sp. YL58 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium CAG:364 (1) | | | | | | | | | | | +--Lachnoclostridium sp. An131 (2) | | | | | | | | | | | +--Dorea (2) | | | | | | | | | | | | | +--Dorea sp. D27 (1) | | | | | | | | | | | | | +--Dorea sp. CAG:317 (1) | | | | | | | | | | | +--Pseudobutyrivibrio (1) | | | | | | | | | | | | | +--Pseudobutyrivibrio xylanivorans DSM 14809 (1) | | | | | | | | | | | +--Lachnobacterium (1) | | | | | | | | | | | | | +--Lachnobacterium bovis DSM 14045 (1) | | | | | | | | | | | +--Anaerocolumna (3) | | | | | | | | | | | | | +--Anaerocolumna jejuensis DSM 15929 (2) | | | | | | | | | | | | | +--Anaerocolumna xylanovorans DSM 12503 (1) | | | | | | | | | | | +--Roseburia (3) | | | | | | | | | | | | | +--Roseburia sp. CAG:100 (1) | | | | | | | | | | | | | +--Roseburia sp. CAG:18 (1) | | | | | | | | | | | | | +--Roseburia sp. CAG:182 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium TWA4 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium COE1 (1) | | | | | | | | | | | +--Anaerosporobacter (1) | | | | | | | | | | | | | +--Anaerosporobacter mobilis DSM 15930 (1) | | | | | | | | | | | +--Lachnoclostridium sp. An14 (1) | | | | | | | | | | | +--Lachnoclostridium sp. An196 (2) | | | | | | | | | | | +--Lachnoclostridium sp. An118 (1) | | | | | | | | | | | +--Robinsoniella sp. RHS (1) | | | | | | | | | | | +--Herbinix luporum (1) | | | | | | | | | | | +--Blautia (4) | | | | | | | | | | | +--Blautia sp. CAG:257 (2) | | | | | | | | | | | +--Blautia sp. CAG:37 (1) | | | | | | | | | | | +--Blautia hydrogenotrophica CAG:147 (1) | | | | | | | | | +--Oscillospiraceae (2) | | | | | | | | | | | +--Oscillibacter sp. 1-3 (1) | | | | | | | | | | | +--Oscillibacter (1) | | | | | | | | | | | +--Oscillibacter sp. CAG:155 (1) | | | | | | | | | +--unclassifiedClostridiales (9) | | | | | | | | | | | +--Proteiniborus sp. DW1 (2) | | | | | | | | | | | +--Clostridiales bacterium PH28_bin88 (1) | | | | | | | | | | | +--Clostridiales bacterium CHKCI006 (1) | | | | | | | | | | | +--Epulopiscium sp. Nele67-Bin004 (1) | | | | | | | | | | | +--Clostridiales bacterium KA00274 (1) | | | | | | | | | | | +--unclassifiedClostridiales(miscellaneous) (1) | | | | | | | | | | | | | +--Clostridiales bacterium oral taxon 876 str. F0540 (1) | | | | | | | | | | | +--Epulopiscium sp. Nele67-Bin005 (1) | | | | | | | | | | | +--Epulopiscium sp. Nuni2H_MBin001 (1) | | | | | | | | | +--Peptostreptococcaceae (1) | | | | | | | | | | | +--Criibacterium bergeronii (1) | | | | | | | | | +--Clostridiaceae (31) | | | | | | | | | | | +--Clostridium sp. BL8 (1) | | | | | | | | | | | +--Clostridium (18) | | | | | | | | | | | | | +--Clostridium clostridioforme CAG:132 (1) | | | | | | | | | | | | | +--Clostridium sp. CAG:226 (1) | | | | | | | | | | | | | +--Clostridium sp. CAG:7 (1) | | | | | | | | | | | | | +--Clostridium sp. CAG:307 (1) | | | | | | | | | | | | | +--Clostridium acidisoli DSM 12555 (1) | | | | | | | | | | | | | +--Clostridium sp. CAG:169 (1) | | | | | | | | | | | | | +--Clostridium sp. CAG:299 (1) | | | | | | | | | | | | | +--Clostridium sp. CAG:1024 (1) | | | | | | | | | | | | | +--Clostridium colicanis DSM 13634 (1) | | | | | | | | | | | | | +--Clostridium sp. CAG:964 (1) | | | | | | | | | | | | | +--Clostridium tyrobutyricum DIVETGP (1) | | | | | | | | | | | | | +--Clostridium saccharobutylicum DSM 13864 (1) | | | | | | | | | | | | | +--Clostridium homopropionicum DSM 5847 (1) | | | | | | | | | | | | | +--Clostridium sp. CAG:448 (1) | | | | | | | | | | | | | +--Clostridium sp. CAG:81 (1) | | | | | | | | | | | | | +--Clostridium sp. CAG:138 (1) | | | | | | | | | | | | | +--Clostridium acetireducens DSM 10703 (1) | | | | | | | | | | | | | +--Clostridium sp. CAG:43 (1) | | | | | | | | | | | +--Geosporobacter ferrireducens (1) | | | | | | | | | | | +--Lactonifactor (1) | | | | | | | | | | | | | +--Lactonifactor longoviformis DSM 17459 (1) | | | | | | | | | | | +--Clostridium sp. N3C (1) | | | | | | | | | | | +--Hathewaya (1) | | | | | | | | | | | | | +--Hathewaya proteolytica DSM 3090 (1) | | | | | | | | | | | +--Clostridium amylolyticum (1) | | | | | | | | | | | +--Butyricicoccus (1) | | | | | | | | | | | | | +--Butyricicoccus pullicaecorum 1.2 (1) | | | | | | | | | | | +--Clostridium sp. HMP27 (1) | | | | | | | | | | | +--Clostridium oryzae (2) | | | | | | | | | | | +--Clostridium sp. FS41 (1) | | | | | | | | | | | +--Lutispora (2) | | | | | | | | | | | +--Lutispora thermophila DSM 19022 (2) | | | | | | | | | +--Eubacteriaceae (11) | | | | | | | | | +--Garciella (1) | | | | | | | | | | | +--Garciella nitratireducens DSM 15102 (1) | | | | | | | | | +--Acetobacterium (2) | | | | | | | | | | | +--Acetobacterium woodii DSM 1030 (2) | | | | | | | | | +--Eubacterium (8) | | | | | | | | | +--Eubacterium rectale CAG:36 (1) | | | | | | | | | +--Eubacterium sp. CAG:841 (1) | | | | | | | | | +--Eubacterium sp. CAG:248 (1) | | | | | | | | | +--Eubacterium sp. CAG:202 (1) | | | | | | | | | +--Eubacterium sp. CAG:38 (2) | | | | | | | | | +--Eubacterium dolichum CAG:375 (1) | | | | | | | | | +--Eubacterium sp. CAG:86 (1) | | | | | | | +--Firmicutes bacterium CAG:56 (1) | | | | | | | +--Firmicutes bacterium CAG:238 (1) | | | | | | | +--Bacilli (75) | | | | | | | | | +--Lactobacillales (75) | | | | | | | | | +--Leuconostocaceae (2) | | | | | | | | | | | +--Leuconostoc (1) | | | | | | | | | | | | | +--Leuconostoc carnosum JB16 (1) | | | | | | | | | | | +--Weissella (1) | | | | | | | | | | | +--Weissella halotolerans DSM 20190 (1) | | | | | | | | | +--Streptococcaceae (5) | | | | | | | | | | | +--Streptococcus sp. DD10 (1) | | | | | | | | | | | +--Streptococcus sp. DD13 (1) | | | | | | | | | | | +--Streptococcus (1) | | | | | | | | | | | | | +--Streptococcusanginosusgroup (1) | | | | | | | | | | | | | +--Streptococcus intermedius B196 (1) | | | | | | | | | | | +--Streptococcus varani (1) | | | | | | | | | | | +--Floricoccus tropicus (1) | | | | | | | | | +--Carnobacteriaceae (8) | | | | | | | | | | | +--Atopostipes (1) | | | | | | | | | | | | | +--Atopostipes suicloacalis DSM 15692 (1) | | | | | | | | | | | +--Jeotgalibaca sp. PTS2502 (1) | | | | | | | | | | | +--Marinilactibacillus sp. 15R (1) | | | | | | | | | | | +--Alkalibacterium sp. AK22 (1) | | | | | | | | | | | +--Carnobacterium (2) | | | | | | | | | | | | | +--Carnobacterium maltaromaticum LMA28 (1) | | | | | | | | | | | | | +--Carnobacterium divergens DSM 20623 (1) | | | | | | | | | | | +--Alkalibacterium sp. 20 (1) | | | | | | | | | | | +--Carnobacterium sp. CP1 (1) | | | | | | | | | +--Enterococcaceae (15) | | | | | | | | | | | +--Enterococcus sp. 9D6_DIV0238 (1) | | | | | | | | | | | +--Vagococcus (1) | | | | | | | | | | | | | +--Vagococcus lutrae LBD1 (1) | | | | | | | | | | | +--Enterococcus sp. 9E7_DIV0242 (1) | | | | | | | | | | | +--Catellicoccus (1) | | | | | | | | | | | | | +--Catellicoccus marimammalium M35/04/3 (1) | | | | | | | | | | | +--Enterococcus (9) | | | | | | | | | | | | | +--Enterococcus dispar ATCC 51266 (1) | | | | | | | | | | | | | +--Enterococcus pallens ATCC BAA-351 (1) | | | | | | | | | | | | | +--Enterococcus phoeniculicola ATCC BAA-412 (2) | | | | | | | | | | | | | +--Enterococcus columbae DSM 7374 = ATCC 51263 (1) | | | | | | | | | | | | | +--Enterococcus sulfureus ATCC 49903 (1) | | | | | | | | | | | | | +--Enterococcus cecorum DSM 20682 = ATCC 43198 (1) | | | | | | | | | | | | | +--Enterococcus asini ATCC 700915 (1) | | | | | | | | | | | | | +--Enterococcussaccharolyticus (1) | | | | | | | | | | | | | +--Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076 (1) | | | | | | | | | | | +--Tetragenococcus (1) | | | | | | | | | | | | | +--Tetragenococcus muriaticus 3MR10-3 (1) | | | | | | | | | | | +--Enterococcus sp. 10A9_DIV0425 (1) | | | | | | | | | +--Lactobacillaceae (40) | | | | | | | | | | | +--Lactobacillus (35) | | | | | | | | | | | | | +--Lactobacillus brantae DSM 23927 (1) | | | | | | | | | | | | | +--Lactobacillus cacaonum DSM 21116 (1) | | | | | | | | | | | | | +--Lactobacillus algidus DSM 15638 (1) | | | | | | | | | | | | | +--Lactobacillus florum 8D (1) | | | | | | | | | | | | | +--Lactobacillus concavus DSM 17758 (1) | | | | | | | | | | | | | +--Lactobacillus versmoldensis DSM 14857 = KCTC 3814 (1) | | | | | | | | | | | | | +--Lactobacillusaviarius (1) | | | | | | | | | | | | | | | +--Lactobacillus aviarius subsp. araffinosus DSM 20653 (1) | | | | | | | | | | | | | +--Lactobacillus agilis DSM 20509 (1) | | | | | | | | | | | | | +--Lactobacillus buchneri CD034 (1) | | | | | | | | | | | | | +--Lactobacillus ozensis DSM 23829 = JCM 17196 (1) | | | | | | | | | | | | | +--Lactobacillus perolens DSM 12744 (1) | | | | | | | | | | | | | +--Lactobacillus oeni DSM 19972 (1) | | | | | | | | | | | | | +--Lactobacillus hayakitensis DSM 18933 = JCM 14209 (1) | | | | | | | | | | | | | +--Lactobacillus nasuensis JCM 17158 (1) | | | | | | | | | | | | | +--Lactobacillus hilgardii DSM 20176 = ATCC 8290 (1) | | | | | | | | | | | | | +--Lactobacillus ghanensis DSM 18630 (1) | | | | | | | | | | | | | +--Lactobacillus lindneri DSM 20690 = JCM 11027 (1) | | | | | | | | | | | | | +--Lactobacillus parafarraginis F0439 (1) | | | | | | | | | | | | | +--Lactobacillus manihotivorans DSM 13343 = JCM 12514 (1) | | | | | | | | | | | | | +--Lactobacillus equi DPC 6820 (1) | | | | | | | | | | | | | +--Lactobacillus apodemi DSM 16634 = JCM 16172 (1) | | | | | | | | | | | | | +--Lactobacilluscoryniformis (1) | | | | | | | | | | | | | | | +--Lactobacillus coryniformis subsp. coryniformis CECT 5711 (1) | | | | | | | | | | | | | +--Lactobacillus saniviri JCM 17471 = DSM 24301 (1) | | | | | | | | | | | | | +--Lactobacillus bifermentans DSM 20003 (1) | | | | | | | | | | | | | +--Lactobacillus tucceti DSM 20183 (1) | | | | | | | | | | | | | +--Lactobacillus camelliae DSM 22697 = JCM 13995 (1) | | | | | | | | | | | | | +--Lactobacillus thailandensis DSM 22698 = JCM 13996 (1) | | | | | | | | | | | | | +--Lactobacillus ceti DSM 22408 (1) | | | | | | | | | | | | | +--Lactobacillus sharpeae JCM 1186 = DSM 20505 (1) | | | | | | | | | | | | | +--Lactobacillus rennini DSM 20253 (1) | | | | | | | | | | | | | +--Lactobacillus dextrinicus DSM 20335 (1) | | | | | | | | | | | | | +--Lactobacillus mucosae LM1 (1) | | | | | | | | | | | | | +--Lactobacillus panis DSM 6035 (1) | | | | | | | | | | | | | +--Lactobacillus senioris DSM 24302 = JCM 17472 (1) | | | | | | | | | | | | | +--Lactobacillus vini DSM 20605 (1) | | | | | | | | | | | +--Lactobacillus curieae (1) | | | | | | | | | | | +--Pediococcus (1) | | | | | | | | | | | | | +--Pediococcus claussenii ATCC BAA-344 (1) | | | | | | | | | | | +--Lactobacillus mellifer (1) | | | | | | | | | | | +--Lactobacillus mellis (1) | | | | | | | | | | | +--Lactobacillus allii (1) | | | | | | | | | +--Aerococcaceae (5) | | | | | | | | | +--Facklamia (4) | | | | | | | | | | | +--Facklamia languida CCUG 37842 (2) | | | | | | | | | | | +--Facklamia ignava CCUG 37419 (1) | | | | | | | | | | | +--Facklamia hominis CCUG 36813 (1) | | | | | | | | | +--Globicatella sp. HMSC072A10 (1) | | | | | | | +--Firmicutes bacterium CAG:791 (1) | | | | | | | +--Firmicutes bacterium CAG:129 (1) | | | | | | | +--Firmicutes bacterium CAG:102 (1) | | | | | | | +--Tissierellia (14) | | | | | | | +--Tissierellales (10) | | | | | | | | | +--Sporanaerobacter sp. PP17-6a (1) | | | | | | | | | +--Sporanaerobacter (2) | | | | | | | | | | | +--Sporanaerobacter acetigenes DSM 13106 (2) | | | | | | | | | +--Tissierellaceae (4) | | | | | | | | | | | +--Tissierella (4) | | | | | | | | | | | +--Tissierella creatinophila DSM 6911 (1) | | | | | | | | | | | +--Tissierella praeacuta DSM 18095 (3) | | | | | | | | | +--Peptoniphilaceae (3) | | | | | | | | | +--Peptoniphilus sp. ING2-D1G (1) | | | | | | | | | +--Anaerosphaera (1) | | | | | | | | | | | +--Anaerosphaera aminiphila DSM 21120 (1) | | | | | | | | | +--Helcococcus (1) | | | | | | | | | +--Helcococcus kunzii ATCC 51366 (1) | | | | | | | +--unclassifiedTissierellia (4) | | | | | | | +--Tissierellia bacterium KA00581 (1) | | | | | | | +--Dethiosulfatibacter (2) | | | | | | | | | +--Dethiosulfatibacter aminovorans DSM 17477 (2) | | | | | | | +--[Clostridium] ultunense Esp (1) | | | | | +--Bacillota (256) | | | | | +--Clostridia (190) | | | | | | | +--Thermoanaerobacterales (5) | | | | | | | | | +--Thermoanaerobacteraceae (5) | | | | | | | | | +--Thermoanaerobacterium (1) | | | | | | | | | | | +--Thermoanaerobacterium sp. RBIITD (1) | | | | | | | | | +--Gelria (1) | | | | | | | | | | | +--Gelria sp. Kuro-4 (1) | | | | | | | | | +--Thermoanaerobacteraceae bacterium SP2 (1) | | | | | | | | | +--Calorimonas adulescens (2) | | | | | | | +--Christensenellales (4) | | | | | | | | | +--Christensenellaceae (4) | | | | | | | | | +--Candidatus Borkfalkia ceftriaxoniphila (1) | | | | | | | | | +--Gehongia tenuis (1) | | | | | | | | | +--Luoshenia tenuis (1) | | | | | | | | | +--Guopingia tenuis (1) | | | | | | | +--Peptostreptococcales (9) | | | | | | | | | +--Anaerovoracaceae (2) | | | | | | | | | | | +--Aminipila luticellarii (1) | | | | | | | | | | | +--Aminipila terrae (1) | | | | | | | | | +--Thermotaleaceae (1) | | | | | | | | | | | +--Anaerosolibacter carboniphilus (1) | | | | | | | | | +--Natronincolaceae (5) | | | | | | | | | | | +--Alkaliphilus pronyensis (1) | | | | | | | | | | | +--Alkaliphilus serpentinus (1) | | | | | | | | | | | +--Serpentinicella alkaliphila (1) | | | | | | | | | | | +--Alkaliphilus (2) | | | | | | | | | | | +--Alkaliphilus sp. B6464 (1) | | | | | | | | | | | +--Alkaliphilus peptidifermentans DSM 18978 (1) | | | | | | | | | +--Peptostreptococcaceae (1) | | | | | | | | | +--Peptostreptococcaceae bacterium pGA-8 (1) | | | | | | | +--Eubacteriales (112) | | | | | | | | | +--Acutalibacteraceae (9) | | | | | | | | | | | +--Caproiciproducens (2) | | | | | | | | | | | | | +--Caproiciproducens sp. NJN-50 (2) | | | | | | | | | | | +--Caproicibacter fermentans (3) | | | | | | | | | | | +--Anaeromassilibacillus (3) | | | | | | | | | | | | | +--Anaeromassilibacillus sp. An250 (1) | | | | | | | | | | | | | +--Anaeromassilibacillus sp. An200 (1) | | | | | | | | | | | | | +--Anaeromassilibacillus sp. An172 (1) | | | | | | | | | | | +--Hydrogeniiclostridium mannosilyticum (1) | | | | | | | | | +--Eubacterialesincertaesedis (10) | | | | | | | | | | | +--Gemmiger (2) | | | | | | | | | | | | | +--Gemmiger sp. An194 (1) | | | | | | | | | | | | | +--Gemmiger sp. An120 (1) | | | | | | | | | | | +--Colidextribacter (1) | | | | | | | | | | | | | +--Colidextribacter sp. OB.20 (1) | | | | | | | | | | | +--Flintibacter faecis (1) | | | | | | | | | | | +--Flintibacter hominis (1) | | | | | | | | | | | +--EubacterialesFamilyXIII.IncertaeSedis (5) | | | | | | | | | | | +--Zhenpiania hominis (1) | | | | | | | | | | | +--Sinanaerobacter chloroacetimidivorans (1) | | | | | | | | | | | +--Lentihominibacter faecis (1) | | | | | | | | | | | +--Lentihominibacter hominis (1) | | | | | | | | | | | +--Hominibacterium faecale (1) | | | | | | | | | +--Butyricicoccaceae (2) | | | | | | | | | | | +--Agathobaculum faecis (1) | | | | | | | | | | | +--Butyricicoccus (1) | | | | | | | | | | | +--Butyricicoccus sp. TM10-16AC (1) | | | | | | | | | +--Bianqueaceae (1) | | | | | | | | | | | +--Bianquea renquensis (1) | | | | | | | | | +--Proteinivoraceae (2) | | | | | | | | | | | +--Anaerobranca (1) | | | | | | | | | | | | | +--Anaerobranca californiensis DSM 14826 (1) | | | | | | | | | | | +--Alkalicella caledoniensis (1) | | | | | | | | | +--Eubacteriaceae (5) | | | | | | | | | | | +--Eubacteriaceae bacterium (1) | | | | | | | | | | | +--Eubacterium (2) | | | | | | | | | | | | | +--Eubacterium sp. CAG:115 (1) | | | | | | | | | | | | | +--Eubacterium sp. AF22-8LB (1) | | | | | | | | | | | +--Eubacteriaceae bacterium Marseille-Q4139 (1) | | | | | | | | | | | +--Alkalibacter rhizosphaerae (1) | | | | | | | | | +--Clostridiaceae (27) | | | | | | | | | | | +--Clostridium (13) | | | | | | | | | | | | | +--Clostridium sp. CAG:122 (1) | | | | | | | | | | | | | +--Clostridium sp. 'deep sea' (1) | | | | | | | | | | | | | +--Clostridium sp. chh4-2 (1) | | | | | | | | | | | | | +--Clostridium sp. JN-9 (1) | | | | | | | | | | | | | +--Clostridium sp. CT7 (1) | | | | | | | | | | | | | +--Clostridium sp. DSM 8431 (1) | | | | | | | | | | | | | +--Clostridium sp. AM58-1XD (2) | | | | | | | | | | | | | +--Clostridium sp. SM-530-WT-3G (1) | | | | | | | | | | | | | +--Clostridium sp. AM33-3 (1) | | | | | | | | | | | | | +--Clostridium sp. cel8 (1) | | | | | | | | | | | | | +--Clostridium sp. KNHs216 (1) | | | | | | | | | | | | | +--Clostridium sp. CAG:149 (1) | | | | | | | | | | | +--Clostridiaceae bacterium OM08-6BH (1) | | | | | | | | | | | +--Clostridium thailandense (1) | | | | | | | | | | | +--Clostridium niameyense (1) | | | | | | | | | | | +--Proteiniclasticum sediminis (1) | | | | | | | | | | | +--Sarcina (1) | | | | | | | | | | | | | +--Sarcina sp. DSM 11001 (1) | | | | | | | | | | | +--Clostridium luticellarii (1) | | | | | | | | | | | +--Senegalia massiliensis (1) | | | | | | | | | | | +--Anaeromonas frigoriresistens (1) | | | | | | | | | | | +--Clostridiaceae bacterium AF18-31LB (1) | | | | | | | | | | | +--Clostridium manihotivorum (1) | | | | | | | | | | | +--Clostridiaceae bacterium JG1575 (1) | | | | | | | | | | | +--Proteiniclasticum aestuarii (1) | | | | | | | | | | | +--Isachenkonia alkalipeptolytica (2) | | | | | | | | | +--Oscillospiraceae (55) | | | | | | | | | | | +--Ruminococcus bovis (1) | | | | | | | | | | | +--Caproicibacterium amylolyticum (1) | | | | | | | | | | | +--Pseudoflavonifractor (4) | | | | | | | | | | | | | +--Pseudoflavonifractor sp. An184 (1) | | | | | | | | | | | | | +--Pseudoflavonifractor sp. AF19-9AC (2) | | | | | | | | | | | | | +--Pseudoflavonifractor sp. An176 (1) | | | | | | | | | | | +--Bittarella massiliensis (ex Durand et al. 2017) (1) | | | | | | | | | | | +--Ruthenibacterium lactatiformans (1) | | | | | | | | | | | +--Dysosmobacter segnis (1) | | | | | | | | | | | +--Anaerotruncus massiliensis (ex Liu et al. 2021) (1) | | | | | | | | | | | +--Ruminococcaceae bacterium AM28-23LB (1) | | | | | | | | | | | +--Anaerofilum (1) | | | | | | | | | | | | | +--Anaerofilum sp. An201 (1) | | | | | | | | | | | +--Ruminococcaceae bacterium BL-6 (1) | | | | | | | | | | | +--Oscillibacter hominis (1) | | | | | | | | | | | +--Flavonifractor (1) | | | | | | | | | | | | | +--Flavonifractor sp. An100 (1) | | | | | | | | | | | +--Vescimonas fastidiosa (1) | | | | | | | | | | | +--Anaerotruncus (1) | | | | | | | | | | | | | +--Anaerotruncus sp. AF02-27 (1) | | | | | | | | | | | +--Anaerobacterium chartisolvens (1) | | | | | | | | | | | +--Pusillibacter faecalis (1) | | | | | | | | | | | +--Ruminococcus (8) | | | | | | | | | | | | | +--Ruminococcus sp. OM06-36AC (1) | | | | | | | | | | | | | +--Ruminococcus sp. AF31-8BH (2) | | | | | | | | | | | | | +--Ruminococcus albus SY3 (2) | | | | | | | | | | | | | +--Ruminococcus sp. AM42-11 (3) | | | | | | | | | | | +--Ruminococcaceae bacterium FB2012 (1) | | | | | | | | | | | +--Ruminococcaceae bacterium AF10-16 (1) | | | | | | | | | | | +--Ruminococcus difficilis (1) | | | | | | | | | | | +--Faecalibacterium (2) | | | | | | | | | | | | | +--Faecalibacterium sp. An121 (1) | | | | | | | | | | | | | +--Faecalibacterium sp. OM04-11BH (1) | | | | | | | | | | | +--Congzhengia minquanensis (1) | | | | | | | | | | | +--Lawsonibacter faecis (1) | | | | | | | | | | | +--Zongyangia hominis (1) | | | | | | | | | | | +--Fumia xinanensis (1) | | | | | | | | | | | +--Faecalibacterium gallinarum (1) | | | | | | | | | | | +--Ruminiclostridium (1) | | | | | | | | | | | | | +--Ruminiclostridium sufflavum DSM 19573 (1) | | | | | | | | | | | +--Ruminococcaceae bacterium BL-4 (1) | | | | | | | | | | | +--Vescimonas coprocola (1) | | | | | | | | | | | +--Drancourtella (1) | | | | | | | | | | | | | +--Drancourtella sp. An57 (1) | | | | | | | | | | | +--Merdimmobilis hominis (1) | | | | | | | | | | | +--Dysosmobacter welbionis (1) | | | | | | | | | | | +--Massiliimalia timonensis (1) | | | | | | | | | | | +--Oscillospiraceae bacterium Marseille-Q3528 (1) | | | | | | | | | | | +--Neobittarella massiliensis (1) | | | | | | | | | | | +--Oscillibacter (1) | | | | | | | | | | | | | +--Oscillibacter sp. PC13 (1) | | | | | | | | | | | +--Oscillospiraceaeincertaesedis (1) | | | | | | | | | | | | | +--[Eubacterium] siraeum CAG:80 (1) | | | | | | | | | | | +--Youxingia wuxianensis (1) | | | | | | | | | | | +--Anaerofilum hominis (1) | | | | | | | | | | | +--Harryflintia acetispora (1) | | | | | | | | | | | +--Ructibacterium gallinarum (1) | | | | | | | | | | | +--Subdoligranulum (1) | | | | | | | | | | | | | +--Subdoligranulum sp. APC924/74 (1) | | | | | | | | | | | +--Oscillospiraceae bacterium HV4-5-C5C (1) | | | | | | | | | | | +--Ligaoa zhengdingensis (1) | | | | | | | | | +--Yeguiaceae (1) | | | | | | | | | +--Yeguia hominis (1) | | | | | | | +--Halanaerobiales (3) | | | | | | | | | +--Halarsenatibacteraceae (1) | | | | | | | | | | | +--Halonatronomonas betaini (1) | | | | | | | | | +--Halanaerobiaceae (2) | | | | | | | | | +--Iocasia fonsfrigidae (1) | | | | | | | | | +--Halanaerobium (1) | | | | | | | | | +--Halanaerobium sp. DL-01 (1) | | | | | | | +--Monoglobales (1) | | | | | | | | | +--Monoglobaceae (1) | | | | | | | | | +--Monoglobus pectinilyticus (1) | | | | | | | +--Lachnospirales (55) | | | | | | | | | +--Anaerotignaceae (1) | | | | | | | | | | | +--Anaerotignum (1) | | | | | | | | | | | +--Anaerotignum lactatifermentans DSM 14214 (1) | | | | | | | | | +--Lachnospiraceae (50) | | | | | | | | | | | +--Lachnospiraceae bacterium AM48-27BH (1) | | | | | | | | | | | +--Qiania dongpingensis (1) | | | | | | | | | | | +--Parablautia intestinalis (1) | | | | | | | | | | | +--Anaerocolumna chitinilytica (1) | | | | | | | | | | | +--Lachnospiraceae bacterium MD329 (1) | | | | | | | | | | | +--Oribacterium (3) | | | | | | | | | | | | | +--unclassifiedOribacterium (1) | | | | | | | | | | | | | | | +--Oribacterium sp. oral taxon 078 str. F0263 (1) | | | | | | | | | | | | | +--Oribacterium sp. C9 (1) | | | | | | | | | | | | | +--Oribacterium sp. KHPX15 (1) | | | | | | | | | | | +--Dorea (1) | | | | | | | | | | | | | +--Dorea sp. AF36-15AT (1) | | | | | | | | | | | +--Lachnospiraceae bacterium KH1T2 (1) | | | | | | | | | | | +--Anaeromicropila herbilytica (1) | | | | | | | | | | | +--Lachnospiraceae bacterium XBD2001 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium C7 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium KM106-2 (1) | | | | | | | | | | | +--Blautia argi (1) | | | | | | | | | | | +--Dorea phocaeensis (1) | | | | | | | | | | | +--Lachnotalea glycerini (1) | | | | | | | | | | | +--Anaerosacchariphilus hominis (2) | | | | | | | | | | | +--Mediterraneibacter (1) | | | | | | | | | | | | | +--Mediterraneibacter gnavus (strain CC55_001C) (1) | | | | | | | | | | | +--Mobilitalea sibirica (1) | | | | | | | | | | | +--Lachnotalea (1) | | | | | | | | | | | | | +--Lachnotalea sp. AF33-28 (1) | | | | | | | | | | | +--Tyzzerella (1) | | | | | | | | | | | | | +--Tyzzerella sp. An114 (1) | | | | | | | | | | | +--Variimorphobacter saccharofermentans (1) | | | | | | | | | | | +--Lachnospiraceae bacterium A10 (1) | | | | | | | | | | | +--Blautia liquoris (1) | | | | | | | | | | | +--Acetitomaculum (1) | | | | | | | | | | | | | +--Acetitomaculum ruminis DSM 5522 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium KHCPX20 (1) | | | | | | | | | | | +--Roseburia zhanii (1) | | | | | | | | | | | +--Lachnospiraceae bacterium OF09-33XD (1) | | | | | | | | | | | +--Lachnoclostridium (1) | | | | | | | | | | | | | +--Lachnoclostridium sp. An181 (1) | | | | | | | | | | | +--Blautia faecicola (2) | | | | | | | | | | | +--Coprococcus (1) | | | | | | | | | | | | | +--Coprococcus sp. AF21-14LB (1) | | | | | | | | | | | +--Roseburia (1) | | | | | | | | | | | | | +--Roseburia sp. OF03-24 (1) | | | | | | | | | | | +--Herbinix hemicellulosilytica (1) | | | | | | | | | | | +--Zhenhengia yiwuensis (1) | | | | | | | | | | | +--Butyrivibrio (8) | | | | | | | | | | | | | +--Butyrivibrio sp. M55 (1) | | | | | | | | | | | | | +--Butyrivibrio sp. CB08 (1) | | | | | | | | | | | | | +--Butyrivibrio sp. Su6 (1) | | | | | | | | | | | | | +--Butyrivibrio sp. XB500-5 (2) | | | | | | | | | | | | | +--Butyrivibrio sp. ob235 (1) | | | | | | | | | | | | | +--Butyrivibrio sp. INlla14 (1) | | | | | | | | | | | | | +--Butyrivibrio sp. YAB3001 (1) | | | | | | | | | | | +--Anaerocolumna sedimenticola (1) | | | | | | | | | | | +--Sellimonas intestinalis (1) | | | | | | | | | | | +--Blautia (1) | | | | | | | | | | | | | +--Blautia sp. OF03-15BH (1) | | | | | | | | | | | +--Candidatus Galacturonibacter soehngenii (2) | | | | | | | | | +--Cellulosilyticaceae (1) | | | | | | | | | | | +--Holtiella tumoricola (1) | | | | | | | | | +--Vallitaleaceae (2) | | | | | | | | | | | +--Vallitalea pronyensis (1) | | | | | | | | | | | +--Vallitalea guaymasensis (1) | | | | | | | | | +--Defluviitaleaceae (1) | | | | | | | | | +--Defluviitalea raffinosedens (1) | | | | | | | +--Clostridia bacterium (1) | | | | | +--Bacilli (39) | | | | | | | +--Lactobacillales (39) | | | | | | | +--Streptococcaceae (8) | | | | | | | | | +--Streptococcus himalayensis (1) | | | | | | | | | +--Streptococcus hillyeri (1) | | | | | | | | | +--Streptococcus (4) | | | | | | | | | | | +--Streptococcus downei MFe28 (1) | | | | | | | | | | | +--Streptococcus sp. zg-36 (1) | | | | | | | | | | | +--Streptococcus sp. sy004 (1) | | | | | | | | | | | +--Streptococcus sp. X16XC17 (1) | | | | | | | | | +--Lactococcus termiticola (1) | | | | | | | | | +--Lactococcus allomyrinae (1) | | | | | | | +--Carnobacteriaceae (4) | | | | | | | | | +--Granulicatella (2) | | | | | | | | | | | +--Granulicatella sp. zg-ZJ (1) | | | | | | | | | | | +--Granulicatella sp. WM01 (1) | | | | | | | | | +--Carnobacteriaceae bacterium zg-C25 (1) | | | | | | | | | +--Jeotgalibaca porci (1) | | | | | | | +--Enterococcaceae (13) | | | | | | | | | +--Vagococcus entomophilus (1) | | | | | | | | | +--Enterococcus florum (1) | | | | | | | | | +--Vagococcus allomyrinae (1) | | | | | | | | | +--Enterococcus (2) | | | | | | | | | | | +--Enterococcus sp. NBRC 3427 (1) | | | | | | | | | | | +--Enterococcus sp. PFB1-1 (1) | | | | | | | | | +--Vagococcus coleopterorum (1) | | | | | | | | | +--Vagococcus vulneris (1) | | | | | | | | | +--Enterococcus alcedinis (1) | | | | | | | | | +--Vagococcus zengguangii (1) | | | | | | | | | +--Vagococcus humatus (1) | | | | | | | | | +--Enterococcus lacertideformus (1) | | | | | | | | | +--Vagococcus silagei (1) | | | | | | | | | +--Tetragenococcus (1) | | | | | | | | | +--Tetragenococcus halophilus subsp. halophilus (1) | | | | | | | +--Lactobacillaceae (10) | | | | | | | | | +--Leuconostocaceae bacterium R-53105 (1) | | | | | | | | | +--Weissella diestrammenae (1) | | | | | | | | | +--Levilactobacillus bambusae (1) | | | | | | | | | +--Levilactobacillus suantsaii (1) | | | | | | | | | +--Philodulcilactobacillus myokoensis (1) | | | | | | | | | +--Nicoliella spurrieriana (1) | | | | | | | | | +--Bombilactobacillus apium (1) | | | | | | | | | +--Periweissella cryptocerci (1) | | | | | | | | | +--Acetilactobacillus jinshanensis (1) | | | | | | | | | +--Ligilactobacillus ubinensis (1) | | | | | | | +--Aerococcaceae (4) | | | | | | | +--Ruoffia halotolerans (1) | | | | | | | +--Fundicoccus ignavus (1) | | | | | | | +--Suicoccus acidiformans (1) | | | | | | | +--Facklamia (1) | | | | | | | +--Facklamia sp. 252 (1) | | | | | +--Negativicutes (3) | | | | | | | +--Selenomonadales (3) | | | | | | | +--Sporomusaceae (2) | | | | | | | | | +--Sporomusa (2) | | | | | | | | | +--Sporomusa silvacetica DSM 10669 (1) | | | | | | | | | +--Sporomusa acidovorans DSM 3132 (1) | | | | | | | +--Selenomonadaceae (1) | | | | | | | +--Selenomonas (1) | | | | | | | +--Selenomonas sp. mPRGC5 (1) | | | | | +--Firmicutes bacterium AF36-19BH (1) | | | | | +--Tissierellia (14) | | | | | | | +--Tissierellales (12) | | | | | | | | | +--Tissierellaceae (4) | | | | | | | | | | | +--Soehngenia longivitae (1) | | | | | | | | | | | +--Paratissierella segnis (1) | | | | | | | | | | | +--Tissierella (2) | | | | | | | | | | | +--Tissierella sp. P1 (2) | | | | | | | | | +--Peptoniphilaceae (3) | | | | | | | | | | | +--Anaerococcus nagyae (2) | | | | | | | | | | | +--Urinicoccus massiliensis (1) | | | | | | | | | +--Tepidimicrobiaceae (4) | | | | | | | | | | | +--Tepidimicrobium xylanilyticum (2) | | | | | | | | | | | +--Keratinibaculum paraultunense (2) | | | | | | | | | +--Sporanaerobacteraceae (1) | | | | | | | | | +--Anaerosalibacter massiliensis (1) | | | | | | | +--Tissierelliaincertaesedis (2) | | | | | | | +--Sedimentibacter (2) | | | | | | | +--Sedimentibacter hydroxybenzoicus DSM 7310 (1) | | | | | | | +--Sedimentibacter sp. zth1 (1) | | | | | +--Erysipelotrichia (9) | | | | | +--Erysipelotrichales (9) | | | | | +--Erysipelotrichaceae (9) | | | | | +--[Eubacterium] hominis (1) | | | | | +--Erysipelothrix (4) | | | | | | | +--Erysipelothrix sp. HDW6C (1) | | | | | | | +--Erysipelothrix sp. HDW6A (1) | | | | | | | +--Erysipelothrix sp. Poltava (1) | | | | | | | +--Erysipelothrix sp. HDW6B (1) | | | | | +--Erysipelotrichaceae bacterium RD49 (1) | | | | | +--Amedibacterium intestinale (1) | | | | | +--Intestinibaculum porci (1) | | | | | +--Absicoccus porci (1) | | | +--FCBgroup (1) | | | +--Bacteroidetes/Chlorobigroup (1) | | | +--Bacteroidetes (1) | | | +--Bacteroidia (1) | | | +--Bacteroidales (1) | | | +--Bacteroidaceae (1) | | | +--Bacteroides (1) | | | +--Bacteroides pectinophilus CAG:437 (1) | +--intestinal bacterium CG19-1 (1) | +--rumen bacterium NK3A20 (1)