# Species tree for RF01815 # Generated from Rfam version 15.00 | +--bacterium MD2 (1) | +--Eukaryota (5) | | | +--Sar (3) | | | | | +--Alveolata (3) | | | | | +--Dinophyceae (3) | | | | | +--Suessiales (3) | | | | | +--Symbiodiniaceae (3) | | | | | +--Effrenium voratum (2) | | | | | +--Symbiodinium (1) | | | | | +--Symbiodinium sp. CCMP2456 (1) | | | +--Metazoa (1) | | | | | +--Porifera (1) | | | | | +--Demospongiae (1) | | | | | +--Tetractinomorpha (1) | | | | | +--Astrophorida (1) | | | | | +--Geodiidae (1) | | | | | +--Geodia barretti (1) | | | +--Rhizaria (1) | | | +--Foraminifera (1) | | | +--Reticulomyxidae (1) | | | +--Reticulomyxa filosa (1) | +--Bacteria (239) | +--Proteobacteria (128) | | | +--Alphaproteobacteria (125) | | | | | +--Rhodospirillales (22) | | | | | | | +--Acetobacteraceae (1) | | | | | | | | | +--Acetobacter (1) | | | | | | | | | +--Acetobacter sp. CAG:977 (1) | | | | | | | +--Geminicoccaceae (1) | | | | | | | | | +--Arboriscoccus pini (1) | | | | | | | +--Rhodospirillaceae bacterium LM22 (1) | | | | | | | +--Rhodospirillaceae bacterium MC2UP-L3 (1) | | | | | | | +--Rhodospirillaceae bacterium Ia16 (1) | | | | | | | +--Rhodospirillaceae (17) | | | | | | | +--Azospirillum sp. B510 (1) | | | | | | | +--Pelagibius litoralis (1) | | | | | | | +--Rhodospirillum centenum SW (1) | | | | | | | +--Rhodospira trueperi (1) | | | | | | | +--Azospirillum doebereinerae (1) | | | | | | | +--Caenispirillum bisanense (1) | | | | | | | +--Rhodospirillum rubrum ATCC 11170 (1) | | | | | | | +--Magnetospira sp. QH-2 (1) | | | | | | | +--Novospirillum itersonii (1) | | | | | | | +--Pararhodospirillum (1) | | | | | | | | | +--Pararhodospirillum photometricum DSM 122 (1) | | | | | | | +--Caenispirillum (1) | | | | | | | | | +--Caenispirillum salinarum AK4 (1) | | | | | | | +--Insolitospirillum peregrinum (1) | | | | | | | +--Inquilinus limosus (1) | | | | | | | +--Magnetospirillum (1) | | | | | | | | | +--Magnetospirillumgryphiswaldense (1) | | | | | | | | | +--Magnetospirillum gryphiswaldense MSR-1 v2 (1) | | | | | | | +--Elstera litoralis (1) | | | | | | | +--Oceanibaculum (1) | | | | | | | | | +--Oceanibaculum indicum P24 (1) | | | | | | | +--Azospirillum sp. TSO22-1 (1) | | | | | +--Rhizobiales bacterium 8.047 (1) | | | | | +--Micavibrio aeruginosavorus ARL-13 (1) | | | | | +--Sneathiellales (1) | | | | | | | +--Sneathiellaceae (1) | | | | | | | +--Sneathiella sp. BFLP-8 (1) | | | | | +--SAR116cluster (1) | | | | | | | +--Candidatus Puniceispirillum marinum IMCC1322 (1) | | | | | +--unclassifiedAlphaproteobacteria (2) | | | | | | | +--alpha proteobacterium IMCC14465 (1) | | | | | | | +--alpha proteobacterium Q-1 (1) | | | | | +--Rhizobiales (86) | | | | | | | +--Bartonellaceae (2) | | | | | | | | | +--Bartonella apis (1) | | | | | | | | | +--Bartonella (1) | | | | | | | | | +--Bartonella tamiae Th239 (1) | | | | | | | +--Brucellaceae (8) | | | | | | | | | +--Paenochrobactrum gallinarii (1) | | | | | | | | | +--Ochrobactrum (1) | | | | | | | | | | | +--Ochrobactrum intermedium 229E (1) | | | | | | | | | +--Brucella melitensis biovar Abortus 2308 (1) | | | | | | | | | +--Ochrobactrum rhizosphaerae (1) | | | | | | | | | +--Ochrobactrum gallinifaecis (1) | | | | | | | | | +--Ochrobactrum anthropi ATCC 49188 (1) | | | | | | | | | +--Pseudochrobactrum saccharolyticum (1) | | | | | | | | | +--Mycoplana dimorpha (1) | | | | | | | +--Aurantimonadaceae (10) | | | | | | | | | +--Aurantimonas manganoxydans SI85-9A1 (1) | | | | | | | | | +--Martelella sp. AD-3 (1) | | | | | | | | | +--Aurantimonas sp. USBA 369 (1) | | | | | | | | | +--Aureimonas sp. Leaf454 (1) | | | | | | | | | +--Aurantimonas altamirensis (1) | | | | | | | | | +--Martelella endophytica (1) | | | | | | | | | +--Aurantimonas sp. 22II-16-19i (1) | | | | | | | | | +--Aureimonas sp. Leaf460 (1) | | | | | | | | | +--Martelella (1) | | | | | | | | | | | +--Martelella mediterranea DSM 17316 (1) | | | | | | | | | +--Martelella mediterranea (1) | | | | | | | +--Phyllobacteriaceae (21) | | | | | | | | | +--Hoeflea marina (1) | | | | | | | | | +--Pseudaminobacter salicylatoxidans (1) | | | | | | | | | +--Mesorhizobium sp. LC103 (1) | | | | | | | | | +--Mesorhizobium sp. ORS3428 (1) | | | | | | | | | +--Phyllobacterium myrsinacearum (1) | | | | | | | | | +--Hoeflea olei (1) | | | | | | | | | +--Mesorhizobium sp. LSHC420B00 (1) | | | | | | | | | +--Hoeflea phototrophica DFL-43 (1) | | | | | | | | | +--Aminobacter sp. MSH1 (1) | | | | | | | | | +--Mesorhizobium sp. BD68 (1) | | | | | | | | | +--Phyllobacterium leguminum (1) | | | | | | | | | +--Mesorhizobium sp. WSM3876 (1) | | | | | | | | | +--Nitratireductor (1) | | | | | | | | | | | +--Nitratireductor indicus C115 (1) | | | | | | | | | +--Mesorhizobium australicum WSM2073 (1) | | | | | | | | | +--Nitratireductor sp. Pht-3B (1) | | | | | | | | | +--Phyllobacterium sp. YR531 (1) | | | | | | | | | +--Mesorhizobium sp. UASWS1009 (1) | | | | | | | | | +--Paramesorhizobium deserti (1) | | | | | | | | | +--Mesorhizobium sp. Root157 (1) | | | | | | | | | +--Hoeflea sp. IMCC20628 (1) | | | | | | | | | +--Hoeflea sp. JG120-1 (1) | | | | | | | +--unclassifiedRhizobiales (1) | | | | | | | | | +--Methyloceanibacter superfactus (1) | | | | | | | +--Hyphomicrobiaceae (7) | | | | | | | | | +--Devosia sp. L15 (1) | | | | | | | | | +--Hyphomicrobium sp. MC1 (1) | | | | | | | | | +--Blastochloris viridis (1) | | | | | | | | | +--Rhodomicrobium vannielii ATCC 17100 (1) | | | | | | | | | +--Prosthecomicrobium hirschii (1) | | | | | | | | | +--Hyphomicrobium facile (1) | | | | | | | | | +--Hyphomicrobium sulfonivorans (1) | | | | | | | +--Rhizobiaceae (32) | | | | | | | | | +--Shinella sp. DC-196 (1) | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (26) | | | | | | | | | | | +--Rhizobium alkalisoli (1) | | | | | | | | | | | +--Rhizobium sp. Leaf306 (1) | | | | | | | | | | | +--Rhizobium sp. Root482 (1) | | | | | | | | | | | +--Rhizobium borbori (1) | | | | | | | | | | | +--Rhizobium tibeticum (1) | | | | | | | | | | | +--Rhizobium sp. Root149 (1) | | | | | | | | | | | +--Rhizobium sp. YS-1r (1) | | | | | | | | | | | +--Rhizobium oryzae (1) | | | | | | | | | | | +--Rhizobium sp. NT-26 (1) | | | | | | | | | | | +--Rhizobium (1) | | | | | | | | | | | | | +--Rhizobiumgallicum (1) | | | | | | | | | | | | | +--Rhizobium gallicum bv. gallicum R602 (1) | | | | | | | | | | | +--Rhizobium giardinii (1) | | | | | | | | | | | +--Rhizobium sp. CCBAU 85046 (1) | | | | | | | | | | | +--Rhizobium etli CFN 42 (1) | | | | | | | | | | | +--Rhizobium oryziradicis (1) | | | | | | | | | | | +--Rhizobium sp. Leaf371 (1) | | | | | | | | | | | +--Pseudorhizobium pelagicum (1) | | | | | | | | | | | +--Rhizobium cellulosilyticum (1) | | | | | | | | | | | +--Agrobacterium vitis S4 (1) | | | | | | | | | | | +--Rhizobium phaseoli (1) | | | | | | | | | | | +--Agrobacterium (1) | | | | | | | | | | | | | +--Agrobacterium albertimagni AOL15 (1) | | | | | | | | | | | +--Pararhizobium polonicum (1) | | | | | | | | | | | +--Rhizobium sp. JC85 (1) | | | | | | | | | | | +--Rhizobium sp. Root1212 (1) | | | | | | | | | | | +--Agrobacterium tumefaciens str. C58 (1) | | | | | | | | | | | +--Rhizobium sp. LC145 (1) | | | | | | | | | | | +--Rhizobium sp. PDO1-076 (1) | | | | | | | | | +--Sinorhizobium/Ensifergroup (5) | | | | | | | | | +--Sinorhizobium terangae (1) | | | | | | | | | +--Sinorhizobium saheli (1) | | | | | | | | | +--Sinorhizobium meliloti 1021 (1) | | | | | | | | | +--Ensifer sp. YIC4027 (1) | | | | | | | | | +--Sinorhizobium fredii NGR234 (1) | | | | | | | +--Xanthobacteraceae (3) | | | | | | | | | +--Xanthobacter autotrophicus Py2 (1) | | | | | | | | | +--Xanthobacter tagetidis (1) | | | | | | | | | +--Pseudoxanthobacter (1) | | | | | | | | | +--Pseudoxanthobacter soli DSM 19599 (1) | | | | | | | +--Methylobacteriaceae (1) | | | | | | | | | +--Microvirga flocculans (1) | | | | | | | +--Bradyrhizobiaceae (1) | | | | | | | +--Salinarimonas sp. SL014B-41A4 (1) | | | | | +--SAR 116 cluster alpha proteobacterium HIMB100 (1) | | | | | +--Rickettsiales (1) | | | | | | | +--endosymbiont of Acanthamoeba sp. UWC9 (1) | | | | | +--Caulobacterales (3) | | | | | | | +--Caulobacteraceae (3) | | | | | | | +--Caulobacter crescentus NA1000 (1) | | | | | | | +--Caulobacter crescentus CB15 (1) | | | | | | | +--Caulobacteraceae bacterium OTSz_A_272 (1) | | | | | +--Holosporales (1) | | | | | | | +--unclassifiedHolosporales (1) | | | | | | | +--Caedibacter varicaedens (1) | | | | | +--Kordiimonadales (1) | | | | | | | +--Kordiimonas sp. S3-22 (1) | | | | | +--Rhodobacterales (4) | | | | | +--Rhodobacteraceae (4) | | | | | +--Labrenzia alba (1) | | | | | +--Ahrensia marina (1) | | | | | +--Pannonibacter phragmitetus (1) | | | | | +--Stappia sp. CC-SPIO-10 (1) | | | +--Gammaproteobacteria (1) | | | | | +--Pseudomonadales (1) | | | | | +--Moraxellaceae (1) | | | | | +--Enhydrobacter aerosaccus (1) | | | +--alpha proteobacterium SK200a-9 (1) | | | +--Proteobacteria bacterium CAG:495 (1) | +--Pseudomonadota (111) | +--Alphaproteobacteria (111) | +--Rhodothalassiales (1) | | | +--Rhodothalassiaceae (1) | | | +--Rhodothalassium (1) | | | +--Rhodothalassium salexigens DSM 2132 (1) | +--Hyphomicrobiales (83) | | | +--Blastochloridaceae (1) | | | | | +--Blastochloris tepida (1) | | | +--Brucellaceae (3) | | | | | +--Falsochrobactrum shanghaiense (1) | | | | | +--Brucella/Ochrobactrumgroup (1) | | | | | | | +--Brucella endophytica (1) | | | | | +--Falsochrobactrum ovis (1) | | | +--Hyphomicrobialesincertaesedis (2) | | | | | +--Nordella (1) | | | | | | | +--Nordella sp. HKS 07 (1) | | | | | +--Vineibacter terrae (1) | | | +--Pleomorphomonadaceae (1) | | | | | +--Hartmannibacter diazotrophicus (1) | | | +--Stappiaceae (1) | | | | | +--Roseibium limicola (1) | | | +--Ancalomicrobiaceae (1) | | | | | +--Siculibacillus lacustris (1) | | | +--Aurantimonadaceae (7) | | | | | +--Jiella endophytica (1) | | | | | +--Aurantimonas marianensis (1) | | | | | +--Aureimonas jatrophae (1) | | | | | +--Aureimonas glaciei (1) | | | | | +--Aureimonas pseudogalii (1) | | | | | +--Martelella alba (1) | | | | | +--Jiella flava (1) | | | +--Phyllobacteriaceae (26) | | | | | +--Hoeflea prorocentri (1) | | | | | +--Phyllobacterium (1) | | | | | | | +--Phyllobacterium sp. YR620 (1) | | | | | +--Mesorhizobium zhangyense (1) | | | | | +--Aquibium carbonis (1) | | | | | +--Phyllobacterium endophyticum (1) | | | | | +--Mesorhizobium waimense (1) | | | | | +--Nitratireductor aestuarii (1) | | | | | +--Oricola cellulosilytica (1) | | | | | +--Tianweitania populi (1) | | | | | +--Roseitalea porphyridii (1) | | | | | +--Mesorhizobium wenxiniae (1) | | | | | +--Oricola thermophila (1) | | | | | +--Chelativorans petroleitrophicus (1) | | | | | +--Phyllobacterium zundukense (1) | | | | | +--Zhengella mangrovi (1) | | | | | +--Tianweitania sediminis (1) | | | | | +--Mesorhizobium (6) | | | | | | | +--Mesorhizobium sp. 8 (1) | | | | | | | +--Mesorhizobium sp. NBSH29 (1) | | | | | | | +--Mesorhizobium sp. J18 (1) | | | | | | | +--Mesorhizobium sp. (1) | | | | | | | +--Mesorhizobium sp. Root172 (1) | | | | | | | +--Mesorhizobium sp. L-8-10 (1) | | | | | +--Pseudaminobacter arsenicus (1) | | | | | +--Mesorhizobium soli (1) | | | | | +--Pseudohoeflea suaedae (1) | | | | | +--Mesorhizobium sanjuanii (1) | | | +--Notoacmeibacteraceae (1) | | | | | +--Notoacmeibacter marinus (1) | | | +--Hyphomicrobiaceae (2) | | | | | +--Methyloligella (1) | | | | | | | +--Methyloligella sp. GL2 (1) | | | | | +--Limoniibacter endophyticus (1) | | | +--Xanthobacteraceae (3) | | | | | +--Aquabacter (1) | | | | | | | +--Aquabacter sp. L1I39 (1) | | | | | +--Xanthobacter dioxanivorans (1) | | | | | +--Xanthobacter (1) | | | | | +--Xanthobacter sp. SG618 (1) | | | +--Rhizobiaceae (32) | | | | | +--Endobacterium cereale (1) | | | | | +--Shinella (1) | | | | | | | +--Shinella sp. WSJ-2 (1) | | | | | +--Ciceribacter (2) | | | | | | | +--Ciceribacter sp. L1K22 (1) | | | | | | | +--Ciceribacter selenitireducens ATCC BAA-1503 (1) | | | | | +--Rhizobium/Agrobacteriumgroup (23) | | | | | | | +--Rhizobium straminoryzae (1) | | | | | | | +--Neorhizobium lilium (1) | | | | | | | +--Rhizobium deserti (1) | | | | | | | +--Pararhizobium mangrovi (1) | | | | | | | +--Agrobacterium (1) | | | | | | | | | +--Agrobacterium sp. AGB01 (1) | | | | | | | +--Rhizobium metallidurans (1) | | | | | | | +--Rhizobium (9) | | | | | | | | | +--Rhizobium sp. JAB6 (1) | | | | | | | | | +--Rhizobium sp. RU20A (1) | | | | | | | | | +--Rhizobium sp. BK275 (1) | | | | | | | | | +--Rhizobium sp. AC44/96 (1) | | | | | | | | | +--Rhizobium sp. BK251 (1) | | | | | | | | | +--Rhizobium sp. P32RR-XVIII (1) | | | | | | | | | +--Rhizobium sp. BG4 (1) | | | | | | | | | +--Rhizobium sp. SEMIA4064 (1) | | | | | | | | | +--Rhizobium sp. BK376 (1) | | | | | | | +--Pararhizobium antarcticum (1) | | | | | | | +--Rhizobium setariae (1) | | | | | | | +--Rhizobium tumorigenes (1) | | | | | | | +--Neorhizobium (3) | | | | | | | | | +--Neorhizobium sp. SOG26 (1) | | | | | | | | | +--Neorhizobium sp. S3-V5DH (1) | | | | | | | | | +--Neorhizobiumgalegae (1) | | | | | | | | | +--Neorhizobium galegae bv. orientalis str. HAMBI 540 (1) | | | | | | | +--Agrobacterium bohemicum (1) | | | | | | | +--Rhizobium album (1) | | | | | +--Gellertiella hungarica (1) | | | | | +--Mycoplana azooxidifex (1) | | | | | +--Ciceribacter lividus (1) | | | | | +--Sinorhizobium/Ensifergroup (2) | | | | | +--Sinorhizobium (1) | | | | | | | +--Sinorhizobium sp. BG8 (1) | | | | | +--Ensifer (1) | | | | | +--Ensifer sp. M14 (1) | | | +--Cohaesibacteraceae (1) | | | | | +--Cohaesibacter (1) | | | | | +--Cohaesibacter sp. CAU 1516 (1) | | | +--Beijerinckiaceae (2) | | | +--Beijerinckiaceae bacterium RH AL1 (1) | | | +--Methylovirgula (1) | | | +--Methylovirgula sp. 4M-Z18 (1) | +--Caulobacterales (3) | | | +--Caulobacteraceae (3) | | | +--Caulobacter (1) | | | | | +--Caulobacter sp. Root655 (1) | | | +--Phenylobacterium kunshanense (1) | | | +--Caulobacter radicis (1) | +--Iodidimonadales (1) | | | +--Iodidimonadaceae (1) | | | +--Iodidimonas gelatinilytica (1) | +--Rhodospirillales (18) | | | +--Zavarziniaceae (2) | | | | | +--Zavarzinia aquatilis (1) | | | | | +--Zavarzinia compransoris (1) | | | +--Kiloniellaceae (1) | | | | | +--Kiloniellaceae bacterium (1) | | | +--Azospirillaceae (1) | | | | | +--Azospirillum thermophilum (1) | | | +--Thalassobaculaceae (2) | | | | | +--Nisaea acidiphila (1) | | | | | +--Thalassobaculum (1) | | | | | +--Thalassobaculum litoreum DSM 18839 (1) | | | +--Rhodospirillales bacterium (1) | | | +--Terasakiellaceae (1) | | | | | +--Terasakiella brassicae (1) | | | +--Fodinicurvataceae (1) | | | | | +--Limibacillus halophilus (1) | | | +--Rhodospirillaceae (5) | | | | | +--Ferrovibrio terrae (1) | | | | | +--Magnetospirillum (1) | | | | | | | +--Magnetospirillum aberrantis SpK (1) | | | | | +--Denitrobaculum tricleocarpae (1) | | | | | +--Elstera cyanobacteriorum (1) | | | | | +--Defluviicoccus (1) | | | | | +--Defluviicoccus sp. (1) | | | +--Acetobacteraceae (3) | | | | | +--Acidisoma silvae (1) | | | | | +--Oleomonas cavernae (1) | | | | | +--Limobrevibacterium gyesilva (1) | | | +--Rhodospirillales bacterium TMPK1 (1) | +--Emcibacterales (3) | | | +--Govaniaceae (1) | | | | | +--Govania unica (1) | | | +--Emcibacteraceae (2) | | | +--Emcibacter nanhaiensis (1) | | | +--Paremcibacter congregatus (1) | +--Sneathiellales (1) | | | +--Sneathiellaceae (1) | | | +--Sneathiella litorea (1) | +--Alphaproteobacteriaincertaesedis (1) | +--SAR116cluster (1) | +--SAR116 cluster bacterium (1)