# Species tree for RF01734 # Generated from Rfam version 15.00 | +--Eukaryota (43) | | | +--Alveolata (1) | | | | | +--Ciliophora (1) | | | | | +--Intramacronucleata (1) | | | | | +--Spirotrichea (1) | | | | | +--Stichotrichia (1) | | | | | +--Sporadotrichida (1) | | | | | +--Halteriidae (1) | | | | | +--Halteria grandinella (1) | | | +--Metazoa (20) | | | | | +--Chordata (17) | | | | | | | +--Craniata (17) | | | | | | | +--Vertebrata (17) | | | | | | | +--Euteleostomi (17) | | | | | | | +--Actinopterygii (3) | | | | | | | | | +--Neopterygii (3) | | | | | | | | | +--Teleostei (3) | | | | | | | | | +--Euteleostei (3) | | | | | | | | | +--Protacanthopterygii (1) | | | | | | | | | | | +--Salmoniformes (1) | | | | | | | | | | | +--Salmonidae (1) | | | | | | | | | | | +--Salmoninae (1) | | | | | | | | | | | +--Oncorhynchus tshawytscha (Chinook salmon) (1) | | | | | | | | | +--Neoteleostei (2) | | | | | | | | | +--Acanthomorpha (2) | | | | | | | | | +--Acanthopterygii (2) | | | | | | | | | +--Percomorpha (2) | | | | | | | | | +--Atherinomorpha (2) | | | | | | | | | +--Cyprinodontiformes (2) | | | | | | | | | +--Poeciliidae (2) | | | | | | | | | +--Poeciliinae (2) | | | | | | | | | +--Poecilia reticulata (guppy) (1) | | | | | | | | | +--Gambusia affinis (western mosquitofish) (1) | | | | | | | +--Archosauria (14) | | | | | | | +--Dinosauria (14) | | | | | | | +--Saurischia (14) | | | | | | | +--Theropoda (14) | | | | | | | +--Coelurosauria (14) | | | | | | | +--Aves (14) | | | | | | | +--Neognathae (14) | | | | | | | +--Passeriformes (11) | | | | | | | | | +--Passeroidea (1) | | | | | | | | | | | +--Fringillidae (1) | | | | | | | | | | | +--Emberizinae (1) | | | | | | | | | | | +--Emberizini (1) | | | | | | | | | | | +--Junco hyemalis (dark-eyed junco) (1) | | | | | | | | | +--Corvoidea (4) | | | | | | | | | | | +--Irenidae (4) | | | | | | | | | | | +--Chloropsis hardwickii (4) | | | | | | | | | +--Sittidae (1) | | | | | | | | | | | +--Tichodroma muraria (1) | | | | | | | | | +--Timaliidae (4) | | | | | | | | | | | +--Pteruthius melanotis (4) | | | | | | | | | +--Meliphagidae (1) | | | | | | | | | +--Grantiella picta (1) | | | | | | | +--Apodiformes (2) | | | | | | | | | +--Apodidae (2) | | | | | | | | | +--Chaetura pelagica (chimney swift) (2) | | | | | | | +--Musophagiformes (1) | | | | | | | +--Musophagidae (1) | | | | | | | +--Corythaeola cristata (great blue turaco) (1) | | | | | +--Arthropoda (3) | | | | | +--Hexapoda (2) | | | | | | | +--Insecta (2) | | | | | | | +--Pterygota (2) | | | | | | | +--Neoptera (2) | | | | | | | +--Endopterygota (2) | | | | | | | +--Lepidoptera (1) | | | | | | | | | +--Glossata (1) | | | | | | | | | +--Ditrysia (1) | | | | | | | | | +--Noctuoidea (1) | | | | | | | | | +--Noctuidae (1) | | | | | | | | | +--Amphipyrinae (1) | | | | | | | | | +--Spodoptera exigua (beet armyworm) (1) | | | | | | | +--Hymenoptera (1) | | | | | | | +--Apocrita (1) | | | | | | | +--Aculeata (1) | | | | | | | +--Vespoidea (1) | | | | | | | +--Formicidae (1) | | | | | | | +--Formicinae (1) | | | | | | | +--Lasius (1) | | | | | | | +--Lasius niger (1) | | | | | +--Crustacea (1) | | | | | +--Ostracoda (1) | | | | | +--Podocopa (1) | | | | | +--Podocopida (1) | | | | | +--Darwinulocopina (1) | | | | | +--Darwinuloidea (1) | | | | | +--Darwinulidae (1) | | | | | +--Darwinula stevensoni (1) | | | +--Fungi (4) | | | | | +--Dikarya (1) | | | | | | | +--Ascomycota (1) | | | | | | | +--Pezizomycotina (1) | | | | | | | +--Eurotiomycetes (1) | | | | | | | +--Chaetothyriomycetidae (1) | | | | | | | +--Chaetothyriales (1) | | | | | | | +--Herpotrichiellaceae (1) | | | | | | | +--Capronia peltigerae (1) | | | | | +--Fungiincertaesedis (3) | | | | | +--Basalfungallineages (3) | | | | | +--Mucoromycotina (3) | | | | | +--Mucorales (3) | | | | | +--Mucoraceae (3) | | | | | +--Rhizopus delemar (2) | | | | | +--Rhizopus oryzae (1) | | | +--Viridiplantae (15) | | | | | +--Streptophyta (15) | | | | | +--Embryophyta (15) | | | | | +--Tracheophyta (15) | | | | | +--Spermatophyta (15) | | | | | +--Magnoliophyta (15) | | | | | +--Liliopsida (3) | | | | | | | +--Poales (1) | | | | | | | | | +--Poaceae (1) | | | | | | | | | +--BEPclade (1) | | | | | | | | | +--Ehrhartoideae (1) | | | | | | | | | +--Oryzeae (1) | | | | | | | | | +--Oryza sativa Indica Group (1) | | | | | | | +--Zingiberales (2) | | | | | | | +--Musaceae (2) | | | | | | | +--Ensete ventricosum (2) | | | | | +--eudicotyledons (12) | | | | | +--coreeudicotyledons (5) | | | | | | | +--rosids (4) | | | | | | | | | +--fabids (1) | | | | | | | | | | | +--Malpighiales (1) | | | | | | | | | | | +--Euphorbiaceae (1) | | | | | | | | | | | +--Acalyphoideae (1) | | | | | | | | | | | +--Acalypheae (1) | | | | | | | | | | | +--Ricinus communis (castor bean) (1) | | | | | | | | | +--malvids (3) | | | | | | | | | +--Malvales (3) | | | | | | | | | +--Malvaceae (3) | | | | | | | | | +--Grewioideae (3) | | | | | | | | | +--Corchorus capsularis (1) | | | | | | | | | +--Corchorus olitorius (2) | | | | | | | +--asterids (1) | | | | | | | +--lamiids (1) | | | | | | | +--Lamiales (1) | | | | | | | +--Gesneriaceae (1) | | | | | | | +--Cyrtandroideae (1) | | | | | | | +--Didymocarpeae (1) | | | | | | | +--Boea hygrometrica (1) | | | | | +--Proteales (6) | | | | | | | +--Proteaceae (6) | | | | | | | +--Protea cynaroides (6) | | | | | +--Ranunculales (1) | | | | | +--Papaveraceae (1) | | | | | +--Papaver nudicaule (1) | | | +--Opisthokonta (3) | | | +--Fungi (3) | | | +--Dikarya (3) | | | +--Ascomycota (3) | | | +--saccharomyceta (3) | | | +--Pezizomycotina (3) | | | +--leotiomyceta (3) | | | +--sordariomyceta (2) | | | | | +--Sordariomycetes (2) | | | | | +--Xylariomycetidae (2) | | | | | +--Xylariales (2) | | | | | +--Xylarialesincertaesedis (1) | | | | | | | +--Monosporascus (1) | | | | | | | +--Monosporascus sp. 5C6A (1) | | | | | +--Hypoxylaceae (1) | | | | | +--Hypoxylon (1) | | | | | +--Hypoxylon sp. CO27-5 (1) | | | +--Eurotiomycetes (1) | | | +--Eurotiomycetidae (1) | | | +--Eurotiales (1) | | | +--Aspergillaceae (1) | | | +--Aspergillus tanneri (1) | +--alkaliphilic bacterium Su22 (1) | +--Bacteria (2351) | | | +--bacterium 1xD8-6 (1) | | | +--Nitrospirota (9) | | | | | +--Thermodesulfovibrionia (1) | | | | | | | +--Thermodesulfovibrionales (1) | | | | | | | +--Dissulfurispiraceae (1) | | | | | | | +--Dissulfurispira thermophila (1) | | | | | +--Nitrospiria (8) | | | | | +--Nitrospirales (7) | | | | | | | +--Nitrospiraceae (7) | | | | | | | +--Candidatus Sulfobium mesophilum (2) | | | | | | | +--Nitrospira (2) | | | | | | | | | +--Nitrospira sp. KM1 (2) | | | | | | | +--Nitrospira lenta (1) | | | | | | | +--Leptospirillum (2) | | | | | | | +--Leptospirillumsp.GroupIII (2) | | | | | | | +--Leptospirillum ferriphilum YSK (2) | | | | | +--CandidatusTroglogloeales (1) | | | | | +--CandidatusManganitrophaceae (1) | | | | | +--Candidatus Manganitrophus noduliformans (1) | | | +--bacterium HR10 (1) | | | +--bacterium HR25 (1) | | | +--bacterium HR07 (1) | | | +--bacterium HR26 (2) | | | +--Cyanobacteria (24) | | | | | +--Oscillatoriales (4) | | | | | | | +--Oscillatoria acuminata PCC 6304 (1) | | | | | | | +--Phormidium ambiguum IAM M-71 (1) | | | | | | | +--Oscillatoria sp. PCC 7112 (1) | | | | | | | +--Oscillatoria sp. PCC 6506 (1) | | | | | +--Stigonematales (4) | | | | | | | +--Chlorogloeopsis fritschii PCC 6912 (1) | | | | | | | +--Fischerella sp. JSC-11 (3) | | | | | +--Pleurocapsales (4) | | | | | | | +--Stanieria cyanosphaera PCC 7437 (1) | | | | | | | +--Chroococcidiopsis thermalis PCC 7203 (2) | | | | | | | +--Pleurocapsa sp. PCC 7327 (1) | | | | | +--Nostocales (7) | | | | | | | +--Nostocaceae (3) | | | | | | | | | +--Nostoc sp. PCC 7524 (1) | | | | | | | | | +--Anabaena variabilis SAG 1403-4b (1) | | | | | | | | | +--Nostoc sp. PCC 7120 (1) | | | | | | | +--Mojavia pulchra JT2-VF2 (1) | | | | | | | +--Scytonemataceae (1) | | | | | | | | | +--Brasilonema sp. CENA114 (1) | | | | | | | +--Rivulariaceae (2) | | | | | | | +--Calothrix sp. PCC 7507 (1) | | | | | | | +--Calothrix desertica PCC 7102 (1) | | | | | +--Oscillatoriales cyanobacterium JSC-12 (2) | | | | | +--Chroococcales (3) | | | | | +--Synechococcus elongatus PCC 7942 (1) | | | | | +--Synechococcus sp. JA-2-3B'a(2-13) (1) | | | | | +--Synechococcus sp. PCC 7002 (1) | | | +--Fusobacteria (10) | | | | | +--Fusobacteriales (9) | | | | | | | +--Fusobacteriaceae (9) | | | | | | | +--Fusobacterium necrogenes (1) | | | | | | | +--Leptotrichia goodfellowii F0264 (1) | | | | | | | +--Cetobacterium ceti (2) | | | | | | | +--[Leptotrichia] amnionii (1) | | | | | | | +--Sebaldella termitidis ATCC 33386 (2) | | | | | | | +--Fusobacterium varium ATCC 27725 (1) | | | | | | | +--Ilyobacter polytropus DSM 2926 (1) | | | | | +--Fusobacteriia (1) | | | | | +--Fusobacteriales (1) | | | | | +--Fusobacteriaceae (1) | | | | | +--Cetobacterium (1) | | | | | +--Cetobacterium somerae ATCC BAA-474 (1) | | | +--bacterium HR16 (1) | | | +--bacterium HR27 (1) | | | +--bacterium HR32 (2) | | | +--bacterium HR33 (1) | | | +--Proteobacteria (459) | | | | | +--Alphaproteobacteria (154) | | | | | | | +--Rhizobiales (71) | | | | | | | | | +--Beijerinckiaceae bacterium BW863 (1) | | | | | | | | | +--Brucellaceae (3) | | | | | | | | | | | +--Ochrobactrum (1) | | | | | | | | | | | | | +--Ochrobactrum intermedium 229E (1) | | | | | | | | | | | +--Ochrobactrum anthropi ATCC 49188 (1) | | | | | | | | | | | +--Mycoplana dimorpha (1) | | | | | | | | | +--Methylocystaceae (16) | | | | | | | | | | | +--Methylocystis sp. B8 (3) | | | | | | | | | | | +--Methylosinus sp. 3S-1 (1) | | | | | | | | | | | +--Methylocystis heyeri (2) | | | | | | | | | | | +--Methylocystis echinoides (2) | | | | | | | | | | | +--Methylocystis parvus (3) | | | | | | | | | | | +--Methylosinus sporium (1) | | | | | | | | | | | +--Methylocystis sp. H2s (3) | | | | | | | | | | | +--Methylopila sp. JZL-4 (1) | | | | | | | | | +--Aurantimonadaceae (2) | | | | | | | | | | | +--Aureimonas sp. Leaf324 (1) | | | | | | | | | | | +--Aurantimonas sp. 22II-16-19i (1) | | | | | | | | | +--Phyllobacteriaceae (14) | | | | | | | | | | | +--Phyllobacterium myrsinacearum (1) | | | | | | | | | | | +--Mesorhizobium sp. ORS3428 (1) | | | | | | | | | | | +--Pseudaminobacter manganicus (3) | | | | | | | | | | | +--Mesorhizobium sp. Root157 (1) | | | | | | | | | | | +--Paramesorhizobium deserti (1) | | | | | | | | | | | +--Aquamicrobium lusatiense (1) | | | | | | | | | | | +--Aminobacter sp. MSH1 (5) | | | | | | | | | | | +--Mesorhizobium sp. WSM3876 (1) | | | | | | | | | +--unclassifiedRhizobiales (3) | | | | | | | | | | | +--Methyloligella halotolerans (1) | | | | | | | | | | | +--Pseudorhodoplanes sinuspersici (1) | | | | | | | | | | | +--Methyloceanibacter methanicus (1) | | | | | | | | | +--Hyphomicrobiaceae (5) | | | | | | | | | | | +--Rhodoplanes serenus (1) | | | | | | | | | | | +--Hyphomicrobium sp. MC1 (1) | | | | | | | | | | | +--Rhodoplanes sp. Z2-YC6860 (1) | | | | | | | | | | | +--Hyphomicrobium denitrificans ATCC 51888 (1) | | | | | | | | | | | +--Rhodoplanes roseus (1) | | | | | | | | | +--Xanthobacteraceae (5) | | | | | | | | | | | +--Starkeya novella DSM 506 (1) | | | | | | | | | | | +--Azorhizobium sp. DSM 18749 (1) | | | | | | | | | | | +--Labrys okinawensis (1) | | | | | | | | | | | +--Pseudolabrys sp. Root1462 (1) | | | | | | | | | | | +--Pseudolabrys taiwanensis (1) | | | | | | | | | +--Rhizobiaceae (8) | | | | | | | | | | | +--Shinella sp. DC-196 (1) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (6) | | | | | | | | | | | | | +--Rhizobium oryzae (1) | | | | | | | | | | | | | +--Agrobacterium vitis S4 (1) | | | | | | | | | | | | | +--Rhizobium sp. JC85 (1) | | | | | | | | | | | | | +--Rhizobium oryziradicis (1) | | | | | | | | | | | | | +--Agrobacterium (1) | | | | | | | | | | | | | | | +--Agrobacterium albertimagni AOL15 (1) | | | | | | | | | | | | | +--Rhizobium sp. LC145 (1) | | | | | | | | | | | +--Sinorhizobium/Ensifergroup (1) | | | | | | | | | | | +--Ensifer sp. YIC4027 (1) | | | | | | | | | +--Methylobacteriaceae (3) | | | | | | | | | | | +--Methylobacterium sp. Leaf93 (1) | | | | | | | | | | | +--Methylobacterium sp. Leaf399 (1) | | | | | | | | | | | +--Methylobacterium extorquens AM1 (1) | | | | | | | | | +--Bradyrhizobiaceae (10) | | | | | | | | | | | +--Bosea sp. TND4EK4 (1) | | | | | | | | | | | +--Bradyrhizobium japonicum USDA 110 (1) | | | | | | | | | | | +--Nitrobacter winogradskyi Nb-255 (1) | | | | | | | | | | | +--Oligotropha carboxidovorans OM5 (1) | | | | | | | | | | | +--Bradyrhizobium sp. LTSP885 (1) | | | | | | | | | | | +--Afipia sp. Root123D2 (1) | | | | | | | | | | | +--Rhodopseudomonas sp. R-45977 (1) | | | | | | | | | | | +--Nitrobacter sp. Nb-311A (1) | | | | | | | | | | | +--Nitrobacter hamburgensis X14 (2) | | | | | | | | | +--Beijerinckiaceae (1) | | | | | | | | | +--Methylocella tundrae (1) | | | | | | | +--Rhodospirillales (35) | | | | | | | | | +--Acetobacteraceae (31) | | | | | | | | | | | +--Acetobacter orleanensis (1) | | | | | | | | | | | +--Acetobacter (2) | | | | | | | | | | | | | +--Acetobacter orientalis 21F-2 (1) | | | | | | | | | | | | | +--Acetobacter aceti (1) | | | | | | | | | | | +--Acetobacter oeni (1) | | | | | | | | | | | +--Ameyamaea chiangmaiensis (1) | | | | | | | | | | | +--Acidiphilium rubrum (1) | | | | | | | | | | | +--Acidocella sp. MX-AZ02 (1) | | | | | | | | | | | +--Roseomonas mucosa (1) | | | | | | | | | | | +--Acetobacter senegalensis (1) | | | | | | | | | | | +--Gluconacetobacter diazotrophicus PAl 5 (2) | | | | | | | | | | | +--Acidocella (1) | | | | | | | | | | | | | +--Acidocella aminolytica 101 = DSM 11237 (1) | | | | | | | | | | | +--Kozakia baliensis (3) | | | | | | | | | | | +--Acidisphaera (1) | | | | | | | | | | | | | +--Acidisphaera rubrifaciens HS-AP3 (1) | | | | | | | | | | | +--Gluconobacter oxydans 621H (3) | | | | | | | | | | | +--Rhodopila globiformis (4) | | | | | | | | | | | +--Acidomonas (5) | | | | | | | | | | | | | +--Acidomonas methanolica NBRC 104435 (5) | | | | | | | | | | | +--Acidiphilium cryptum JF-5 (2) | | | | | | | | | | | +--Rhodovastum atsumiense (1) | | | | | | | | | +--Rhodospirillaceae (4) | | | | | | | | | +--Azospirillum amazonense Y2 (1) | | | | | | | | | +--Telmatospirillum siberiense (2) | | | | | | | | | +--Rhodospirillum rubrum ATCC 11170 (1) | | | | | | | +--Rhizobiales bacterium 8.047 (1) | | | | | | | +--Sphingomonadales (45) | | | | | | | | | +--Sphingomonadaceae (45) | | | | | | | | | +--Novosphingobium sp. AP12 (1) | | | | | | | | | +--Sphingomonas sp. (2) | | | | | | | | | +--Sphingomonas taxi (1) | | | | | | | | | +--Novosphingobium sp. Leaf2 (1) | | | | | | | | | +--Novosphingobium sp. AAP1 (1) | | | | | | | | | +--Novosphingobium sp. FSW06-99 (1) | | | | | | | | | +--Sphingomonas sp. Leaf343 (1) | | | | | | | | | +--Sphingomonas sp. Leaf17 (1) | | | | | | | | | +--Novosphingobium sp. ST904 (2) | | | | | | | | | +--Sphingomonas wittichii RW1 (2) | | | | | | | | | +--Sphingosinicella sp. JLT832 (1) | | | | | | | | | +--Sphingobium sp. LL03 (1) | | | | | | | | | +--Sphingomonas sp. BH3 (1) | | | | | | | | | +--Novosphingobium sp. HU1-AH51 (1) | | | | | | | | | +--Sphingomonas sp. Leaf339 (1) | | | | | | | | | +--Sphingomonas sp. ERB1-3 (12) | | | | | | | | | +--Sphingomonas adhaesiva (1) | | | | | | | | | +--Sphingomonas sp. YC6723 (1) | | | | | | | | | +--Novosphingobium nitrogenifigens DSM 19370 (1) | | | | | | | | | +--Sphingomonas sp. IC081 (1) | | | | | | | | | +--Sphingomonas sp. MM-1 (1) | | | | | | | | | +--Sphingomonas sp. Leaf42 (1) | | | | | | | | | +--Sphingomonas melonis (2) | | | | | | | | | +--Zymomonas mobilis subsp. mobilis ZM4 (1) | | | | | | | | | +--Novosphingobium sp. Fuku2-ISO-50 (1) | | | | | | | | | +--Sphingomonas sp. Leaf412 (1) | | | | | | | | | +--Sphingobium sp. TKS (1) | | | | | | | | | +--Sphingomonas sp. Ant20 (1) | | | | | | | | | +--Sphingomonas sp. KHI 67 (1) | | | | | | | | | +--Sphingomonas sp. Leaf231 (1) | | | | | | | +--Rhodobacterales (2) | | | | | | | +--Rhodobacteraceae (2) | | | | | | | +--Rubellimicrobium (1) | | | | | | | | | +--Rubellimicrobium thermophilum DSM 16684 (1) | | | | | | | +--Rhodovulum sp. PH10 (1) | | | | | +--Gammaproteobacteria (159) | | | | | | | +--Enterobacterales (15) | | | | | | | | | +--Yersiniaceae (3) | | | | | | | | | | | +--Serratia sp. DD3 (1) | | | | | | | | | | | +--Ewingella (1) | | | | | | | | | | | | | +--Ewingella americana ATCC 33852 (1) | | | | | | | | | | | +--Chania (1) | | | | | | | | | | | +--Chania multitudinisentens RB-25 (1) | | | | | | | | | +--Pectobacteriaceae (3) | | | | | | | | | | | +--Sodalis praecaptivus (2) | | | | | | | | | | | +--Sodalis sp. TME1 (1) | | | | | | | | | +--Enterobacteriaceae (5) | | | | | | | | | | | +--unclassifiedEnterobacteriaceae (2) | | | | | | | | | | | | | +--Enterobacteriaceae bacterium strain FGI 57 (2) | | | | | | | | | | | +--Klebsiella michiganensis (2) | | | | | | | | | | | +--Mangrovibacter sp. MFB070 (1) | | | | | | | | | +--unclassifiedEnterobacterales (1) | | | | | | | | | | | +--Plesiomonas (1) | | | | | | | | | | | +--Plesiomonas shigelloides 302-73 (1) | | | | | | | | | +--Erwiniaceae (2) | | | | | | | | | | | +--Erwinia (1) | | | | | | | | | | | | | +--Erwinia billingiae Eb661 (1) | | | | | | | | | | | +--Tatumella (1) | | | | | | | | | | | +--Tatumella ptyseos ATCC 33301 (1) | | | | | | | | | +--Hafniaceae (1) | | | | | | | | | +--Hafnia (1) | | | | | | | | | +--Hafnia alvei FB1 (1) | | | | | | | +--Vibrionales (18) | | | | | | | | | +--Vibrionaceae (18) | | | | | | | | | +--Photobacterium proteolyticum (1) | | | | | | | | | +--Photobacterium jeanii (2) | | | | | | | | | +--Vibrio renipiscarius (1) | | | | | | | | | +--Vibrio sp. R-40493 (1) | | | | | | | | | +--Vibrio fischeri ES114 (2) | | | | | | | | | +--Photobacterium lipolyticum (1) | | | | | | | | | +--Vibrio ishigakensis (1) | | | | | | | | | +--Photobacterium profundum SS9 (1) | | | | | | | | | +--Photobacterium sp. CECT 7614 (1) | | | | | | | | | +--Photobacterium sp. Gung47 (1) | | | | | | | | | +--Vibrio (4) | | | | | | | | | | | +--Vibrio rumoiensis 1S-45 (1) | | | | | | | | | | | +--Vibrio ezurae NBRC 102218 (1) | | | | | | | | | | | +--Vibrio genomosp. F6 str. FF-238 (1) | | | | | | | | | | | +--Vibrio proteolyticus NBRC 13287 (1) | | | | | | | | | +--Photobacterium aquimaris (1) | | | | | | | | | +--Photobacterium damselae subsp. damselae CIP 102761 (1) | | | | | | | +--Celerinatantimonadaceae (3) | | | | | | | | | +--Celerinatantimonas diazotrophica (3) | | | | | | | +--Xanthomonadales (48) | | | | | | | | | +--Rhodanobacteraceae (7) | | | | | | | | | | | +--Rhodanobacter sp. OK091 (1) | | | | | | | | | | | +--Rhodanobacter sp. B05 (1) | | | | | | | | | | | +--Rhodanobacter sp. C06 (1) | | | | | | | | | | | +--Rhodanobacter (2) | | | | | | | | | | | | | +--Rhodanobacter fulvus Jip2 (1) | | | | | | | | | | | | | +--Rhodanobacter spathiphylli B39 (1) | | | | | | | | | | | +--Frateuria (1) | | | | | | | | | | | | | +--Frateuria aurantia DSM 6220 (1) | | | | | | | | | | | +--Oleiagrimonas soli (1) | | | | | | | | | +--Xanthomonadaceae (40) | | | | | | | | | | | +--Aquimonas voraii (1) | | | | | | | | | | | +--Dyella sp. ATSB10 (1) | | | | | | | | | | | +--Rhodanobacter thiooxydans (9) | | | | | | | | | | | +--Dyella soli (2) | | | | | | | | | | | +--Pseudoxanthomonas suwonensis (1) | | | | | | | | | | | +--Lysobacter enzymogenes (1) | | | | | | | | | | | +--Frateuria terrea (1) | | | | | | | | | | | +--Stenotrophomonas panacihumi (1) | | | | | | | | | | | +--Xanthomonas (1) | | | | | | | | | | | | | +--Xanthomonas albilineans GPE PC73 (1) | | | | | | | | | | | +--Lysobacter sp. Root96 (1) | | | | | | | | | | | +--Stenotrophomonas (1) | | | | | | | | | | | | | +--Stenotrophomonas maltophilia K279a (1) | | | | | | | | | | | +--Xanthomonas campestris pv. campestris str. ATCC 33913 (1) | | | | | | | | | | | +--Rhodanobacter sp. MO64 (1) | | | | | | | | | | | +--Pseudoxanthomonas broegbernensis (1) | | | | | | | | | | | +--Luteimonas sp. FCS-9 (1) | | | | | | | | | | | +--Thermomonas haemolytica (2) | | | | | | | | | | | +--Lysobacter antibioticus (1) | | | | | | | | | | | +--Stenotrophomonas daejeonensis (1) | | | | | | | | | | | +--Fulvimonas soli (9) | | | | | | | | | | | +--Xanthomonas oryzae pv. oryzae KACC10331 (1) | | | | | | | | | | | +--Luteibacter anthropi (1) | | | | | | | | | | | +--Rhodanobacter lindaniclasticus (1) | | | | | | | | | +--Pseudomonas boreopolis (1) | | | | | | | +--Enterobacteriales (34) | | | | | | | | | +--primary endosymbiont of Sitophilus oryzae (1) | | | | | | | | | +--Enterobacteriaceae (33) | | | | | | | | | +--Kluyvera cryocrescens (1) | | | | | | | | | +--Serratia fonticola (1) | | | | | | | | | +--Brenneria rubrifaciens (1) | | | | | | | | | +--Erwinia tasmaniensis (1) | | | | | | | | | +--Gibbsiella quercinecans (1) | | | | | | | | | +--Tatumella morbirosei (1) | | | | | | | | | +--Dickeya dadantii 3937 (1) | | | | | | | | | +--Enterobacter gergoviae (2) | | | | | | | | | +--Sodalis glossinidius str. 'morsitans' (1) | | | | | | | | | +--Cedecea neteri (2) | | | | | | | | | +--Citrobacter koseri ATCC BAA-895 (3) | | | | | | | | | +--Serratia ficaria (1) | | | | | | | | | +--Serratia sp. ATCC 39006 (2) | | | | | | | | | +--Yersinia pestis CO92 (1) | | | | | | | | | +--Pantoea ananatis LMG 20103 (1) | | | | | | | | | +--Edwardsiella hoshinae (1) | | | | | | | | | +--Pectobacterium atrosepticum SCRI1043 (1) | | | | | | | | | +--Brenneria goodwinii (1) | | | | | | | | | +--Erwinia mallotivora (2) | | | | | | | | | +--Providencia stuartii (1) | | | | | | | | | +--Serratia rubidaea (1) | | | | | | | | | +--Erwinia tracheiphila (1) | | | | | | | | | +--Escherichia blattae DSM 4481 (1) | | | | | | | | | +--Pantoea agglomerans (1) | | | | | | | | | +--Pantoea vagans (1) | | | | | | | | | +--Yersinia ruckeri (1) | | | | | | | | | +--Serratia odorifera DSM 4582 (1) | | | | | | | +--Chromatiales (5) | | | | | | | | | +--Ectothiorhodospiraceae (1) | | | | | | | | | | | +--Thioalkalivibrio denitrificans (1) | | | | | | | | | +--Chromatiaceae (1) | | | | | | | | | | | +--Thiobaca trueperi (1) | | | | | | | | | +--Halothiobacillaceae (1) | | | | | | | | | | | +--Halothiobacillus neapolitanus c2 (1) | | | | | | | | | +--Chromatiaceae bacterium RW (2) | | | | | | | +--Acidithiobacillales (4) | | | | | | | | | +--Acidithiobacillaceae (4) | | | | | | | | | +--Acidithiobacillus ferrooxidans ATCC 23270 (1) | | | | | | | | | +--Acidithiobacillus sp. SH (2) | | | | | | | | | +--Acidithiobacillus caldus SM-1 (1) | | | | | | | +--Oceanospirillales (7) | | | | | | | | | +--Hahellaceae (1) | | | | | | | | | | | +--Endozoicomonas montiporae (1) | | | | | | | | | +--Halomonadaceae (6) | | | | | | | | | +--Kushneria marisflavi (1) | | | | | | | | | +--Halotalea alkalilenta (1) | | | | | | | | | +--Salinicola sp. MIT1003 (1) | | | | | | | | | +--Zymobactergroup (1) | | | | | | | | | | | +--Zymobacter palmae (1) | | | | | | | | | +--Kushneria sp. Z35 (1) | | | | | | | | | +--Modicisalibacter sp. YIM 90637 (1) | | | | | | | +--Pseudomonadales (25) | | | | | | | +--Pseudomonadaceae (11) | | | | | | | | | +--Pseudomonas asplenii (1) | | | | | | | | | +--Pseudomonas syringae pv. tomato str. DC3000 (1) | | | | | | | | | +--Pseudomonas fluorescens SBW25 (1) | | | | | | | | | +--Pseudomonas panipatensis (1) | | | | | | | | | +--Pseudomonas sp. M47T1 (1) | | | | | | | | | +--Pseudomonas sp. HPB0071 (1) | | | | | | | | | +--Pseudomonas aeruginosa PAO1 (1) | | | | | | | | | +--Pseudomonas (1) | | | | | | | | | | | +--Pseudomonas knackmussii B13 (1) | | | | | | | | | +--Azomonas macrocytogenes (1) | | | | | | | | | +--Pseudomonas jinjuensis (2) | | | | | | | +--Moraxellaceae (14) | | | | | | | +--Acinetobacter sp. ADP1 (1) | | | | | | | +--Enhydrobacter aerosaccus (1) | | | | | | | +--Acinetobacter sp. CIP 102637 (1) | | | | | | | +--Acinetobacter larvae (2) | | | | | | | +--Acinetobacter qingfengensis (1) | | | | | | | +--Acinetobacter sp. G30 (1) | | | | | | | +--Acinetobacter (7) | | | | | | | +--Acinetobacter gerneri DSM 14967 = CIP 107464 (3) | | | | | | | +--Acinetobacter calcoaceticus PHEA-2 (1) | | | | | | | +--Acinetobacter nectaris CIP 110549 (1) | | | | | | | +--Acinetobacter baumannii ATCC 19606 (1) | | | | | | | +--Acinetobacter brisouii CIP 110357 (1) | | | | | +--gamma proteobacterium DKE (2) | | | | | +--Betaproteobacteria (107) | | | | | | | +--Methylophilales (1) | | | | | | | | | +--Methylophilaceae (1) | | | | | | | | | +--Methylovorus glucosetrophus SIP3-4 (1) | | | | | | | +--Burkholderiales (94) | | | | | | | | | +--Thiomonas sp. S10 (2) | | | | | | | | | +--Alcaligenaceae (18) | | | | | | | | | | | +--Pusillimonas sp. MJ07 (1) | | | | | | | | | | | +--Castellaniella (1) | | | | | | | | | | | | | +--Castellaniella defragrans 65Phen (1) | | | | | | | | | | | +--Bordetella sp. N (1) | | | | | | | | | | | +--Alcaligenes sp. EGD-AK7 (1) | | | | | | | | | | | +--Pusillimonas sp. PB3-7B (9) | | | | | | | | | | | +--Candidimonas nitroreducens (4) | | | | | | | | | | | +--Alcaligenes sp. GR24-5 (1) | | | | | | | | | +--Alcaligenaceae bacterium BZ59 (10) | | | | | | | | | +--Roseateles depolymerans (1) | | | | | | | | | +--unclassifiedBurkholderiales (1) | | | | | | | | | | | +--BurkholderialesGeneraincertaesedis (1) | | | | | | | | | | | +--Xylophilus sp. Leaf220 (1) | | | | | | | | | +--Thiomonas delicata (1) | | | | | | | | | +--Oxalobacteraceae (10) | | | | | | | | | | | +--Oxalobacter formigenes OXCC13 (1) | | | | | | | | | | | +--Collimonas fungivorans Ter331 (1) | | | | | | | | | | | +--Oxalobacter formigenes HOxBLS (1) | | | | | | | | | | | +--Duganella sp. Leaf126 (1) | | | | | | | | | | | +--Herbaspirillum sp. YR522 (1) | | | | | | | | | | | +--Oxalobacter vibrioformis (1) | | | | | | | | | | | +--Oxalicibacterium solurbis (1) | | | | | | | | | | | +--Massilia sp. D5 (1) | | | | | | | | | | | +--Massilia sp. WF1 (1) | | | | | | | | | | | +--Herbaspirillum seropedicae SmR1 (1) | | | | | | | | | +--Burkholderiaceae (41) | | | | | | | | | | | +--Ralstonia sp. 5_2_56FAA (1) | | | | | | | | | | | +--Burkholderia xenovorans LB400 (1) | | | | | | | | | | | +--Burkholderia sediminicola (1) | | | | | | | | | | | +--Burkholderia sp. TNe-841 (1) | | | | | | | | | | | +--Paraburkholderia ribeironis (1) | | | | | | | | | | | +--Ralstonia solanacearum GMI1000 (1) | | | | | | | | | | | +--Paraburkholderia ginsengiterrae (1) | | | | | | | | | | | +--Burkholderia graminis C4D1M (1) | | | | | | | | | | | +--Burkholderia sp. IMER-B1-49 (1) | | | | | | | | | | | +--Pandoraea pnomenusa (1) | | | | | | | | | | | +--Burkholderia andropogonis (1) | | | | | | | | | | | +--Burkholderia sp. J1 (1) | | | | | | | | | | | +--Burkholderia (4) | | | | | | | | | | | | | +--Burkholderia pseudomallei K96243 (1) | | | | | | | | | | | | | +--Burkholderia seminalis (1) | | | | | | | | | | | | | +--Burkholderia multivorans ATCC 17616 (1) | | | | | | | | | | | | | +--Burkholderia glumae PG1 (1) | | | | | | | | | | | +--Burkholderia phenazinium (1) | | | | | | | | | | | +--Burkholderia sp. PO-04-17-38 (1) | | | | | | | | | | | +--Burkholderia phymatum STM815 (1) | | | | | | | | | | | +--Burkholderia sp. JPY461 (3) | | | | | | | | | | | +--Burkholderia soli (1) | | | | | | | | | | | +--Burkholderia sp. SRS-W-2-2016 (1) | | | | | | | | | | | +--Burkholderia sp. Leaf177 (1) | | | | | | | | | | | +--Burkholderia glumae BGR1 (1) | | | | | | | | | | | +--Cupriavidus sp. USMAA2-4 (4) | | | | | | | | | | | +--Burkholderia megapolitana (1) | | | | | | | | | | | +--Burkholderia sp. IMER-B1-33 (3) | | | | | | | | | | | +--Burkholderia caryophylli (1) | | | | | | | | | | | +--Burkholderia tropica (2) | | | | | | | | | | | +--Burkholderia sp. lig30 (1) | | | | | | | | | | | +--Ralstonia solanacearum IPO1609 (1) | | | | | | | | | | | +--Burkholderia sp. ATSB16 (1) | | | | | | | | | | | +--Candidatus Burkholderia verschuerenii (1) | | | | | | | | | +--Ideonella dechloratans (1) | | | | | | | | | +--Comamonadaceae (9) | | | | | | | | | +--Delftia acidovorans SPH-1 (2) | | | | | | | | | +--Variovorax sp. PBL-E5 (1) | | | | | | | | | +--Alicycliphilus denitrificans K601 (1) | | | | | | | | | +--Diaphorobacter sp. J5-51 (3) | | | | | | | | | +--Variovorax sp. PAMC 28711 (1) | | | | | | | | | +--Comamonas terrigena (1) | | | | | | | +--Neisseriales (8) | | | | | | | | | +--Chromobacteriaceae (1) | | | | | | | | | | | +--Andreprevotia (1) | | | | | | | | | | | +--Andreprevotia lacus DSM 23236 (1) | | | | | | | | | +--Neisseriaceae (7) | | | | | | | | | +--Pseudogulbenkiania sp. NH8B (1) | | | | | | | | | +--Silvimonas terrae (2) | | | | | | | | | +--Chromobacterium violaceum ATCC 12472 (1) | | | | | | | | | +--Neisseriaceae bacterium IGB-41 (1) | | | | | | | | | +--Crenobacter luteus (2) | | | | | | | +--Nitrosomonadales (3) | | | | | | | | | +--Nitrosomonadaceae (3) | | | | | | | | | +--Nitrosomonas europaea ATCC 19718 (2) | | | | | | | | | +--Nitrosovibrio sp. Nv17 (1) | | | | | | | +--Hydrogenophilales (1) | | | | | | | +--Hydrogenophilaceae (1) | | | | | | | +--Thiobacillus plumbophilus (1) | | | | | +--Deltaproteobacteria (29) | | | | | | | +--Desulfovibrionales (10) | | | | | | | | | +--Desulfohalobiaceae (1) | | | | | | | | | | | +--Desulfonatronospira thiodismutans ASO3-1 (1) | | | | | | | | | +--Desulfovibrionaceae (9) | | | | | | | | | +--Desulfovibrio africanus str. Walvis Bay (1) | | | | | | | | | +--Desulfovibrio mexicanus (4) | | | | | | | | | +--Desulfovibrio sp. G11 (1) | | | | | | | | | +--Desulfovibrio sp. X2 (1) | | | | | | | | | +--Desulfovibrio sp. 6_1_46AFAA (2) | | | | | | | +--Desulfuromonadales (2) | | | | | | | | | +--Desulfuromonadaceae (2) | | | | | | | | | +--Desulfuromonas acetoxidans DSM 684 (1) | | | | | | | | | +--Desulfuromonas acetexigens (1) | | | | | | | +--Desulfobacterales (2) | | | | | | | | | +--Desulfobacteraceae (2) | | | | | | | | | +--Desulfoluna spongiiphila (1) | | | | | | | | | +--Desulfococcus oleovorans Hxd3 (1) | | | | | | | +--Desulfurellales (2) | | | | | | | | | +--Desulfurellaceae (2) | | | | | | | | | +--Hippea maritima DSM 10411 (2) | | | | | | | +--Syntrophobacterales (13) | | | | | | | +--Syntrophobacteraceae (8) | | | | | | | | | +--Thermodesulforhabdus norvegica (1) | | | | | | | | | +--Syntrophobacter fumaroxidans MPOB (1) | | | | | | | | | +--Desulfacinum sp. USBA 53 (2) | | | | | | | | | +--Desulforhabdus amnigena (4) | | | | | | | +--Syntrophaceae (5) | | | | | | | +--Desulfobacca acetoxidans DSM 11109 (2) | | | | | | | +--Desulfomonile tiedjei DSM 6799 (2) | | | | | | | +--Syntrophus gentianae (1) | | | | | +--alpha proteobacterium BCC 25711 (1) | | | | | +--delta/epsilonsubdivisions (7) | | | | | +--Deltaproteobacteria (7) | | | | | +--Desulfovibrionales (1) | | | | | | | +--Desulfovibrionaceae (1) | | | | | | | +--Desulfovibrio (1) | | | | | | | +--Desulfovibrio bizertensis DSM 18034 (1) | | | | | +--Desulfobacterales (1) | | | | | | | +--Desulfobacteraceae (1) | | | | | | | +--Desulfobacterium (1) | | | | | | | +--Desulfobacterium vacuolatum DSM 3385 (1) | | | | | +--Syntrophobacterales (3) | | | | | | | +--Syntrophobacteraceae (3) | | | | | | | +--Desulfacinum (3) | | | | | | | +--Desulfacinum hydrothermale DSM 13146 (3) | | | | | +--Desulfurellales (2) | | | | | +--Desulfurellaceae (2) | | | | | +--Desulfurella amilsii (2) | | | +--unclassifiedBacteria (7) | | | | | +--bacteria symbiont BFo2 of Frankliniella occidentalis (1) | | | | | +--Candidatus Vecturithrix granuli (4) | | | | | +--Candidatus Moduliflexus flocculans (2) | | | +--Thermotogota (2) | | | | | +--Thermotogae (2) | | | | | +--Kosmotogales (1) | | | | | | | +--Kosmotogaceae (1) | | | | | | | +--Mesotoga (1) | | | | | | | +--Mesotoga sp. SC_3PWM13N19 (1) | | | | | +--Thermotogales (1) | | | | | +--Thermotogaceae (1) | | | | | +--Pseudothermotoga (1) | | | | | +--Pseudothermotoga hypogea DSM 11164 = NBRC 106472 (1) | | | +--Myxococcota (1) | | | | | +--Polyangia (1) | | | | | +--Haliangiales (1) | | | | | +--Kofleriaceae (1) | | | | | +--Kofleriaceae bacterium (1) | | | +--Spirochaetes (7) | | | | | +--Spirochaetia (1) | | | | | | | +--Leptospirales (1) | | | | | | | +--Leptospiraceae (1) | | | | | | | +--Leptonema (1) | | | | | | | +--Leptonema illini DSM 21528 (1) | | | | | +--Spirochaetales (6) | | | | | +--Spirochaetaceae (6) | | | | | +--Spirochaeta caldaria DSM 7334 (2) | | | | | +--Spirochaeta sp. Buddy (2) | | | | | +--Spirochaeta americana (1) | | | | | +--Spirochaeta sp. Grapes (1) | | | +--bacterium HR24 (1) | | | +--Synergistetes (3) | | | | | +--Synergistia (3) | | | | | +--Synergistales (3) | | | | | +--Synergistaceae (3) | | | | | +--Thermanaerovibrio acidaminovorans DSM 6589 (1) | | | | | +--Cloacibacillus (1) | | | | | | | +--Cloacibacillus evryensis DSM 19522 (1) | | | | | +--Aminobacterium colombiense DSM 12261 (1) | | | +--Firmicutes bacterium LX-B (2) | | | +--Thermodesulfobacteria (1) | | | | | +--Thermodesulfobacteriales (1) | | | | | +--Thermodesulfobacteriaceae (1) | | | | | +--Thermodesulfobacterium commune DSM 2178 (1) | | | +--Pseudomonas sp. (2) | | | +--Deinococcus-Thermus (2) | | | | | +--Deinococci (2) | | | | | +--Thermales (1) | | | | | | | +--Thermaceae (1) | | | | | | | +--Meiothermus silvanus DSM 9946 (1) | | | | | +--Deinococcales (1) | | | | | +--Trueperaceae (1) | | | | | +--Truepera radiovictrix DSM 17093 (1) | | | +--Thermobaculum terrenum ATCC BAA-798 (2) | | | +--bacterium HR37 (2) | | | +--Verrucomicrobia (5) | | | | | +--Spartobacteria (1) | | | | | | | +--Chthoniobacter flavus Ellin428 (1) | | | | | +--Verrucomicrobiae (2) | | | | | | | +--Verrucomicrobiales (2) | | | | | | | +--Verrucomicrobiaceae (1) | | | | | | | | | +--Luteolibacter pohnpeiensis (1) | | | | | | | +--Verrucomicrobiasubdivision3 (1) | | | | | | | +--Pedosphaera parvula Ellin514 (1) | | | | | +--Verrucomicrobia bacterium 3b (2) | | | +--Terrabacteriagroup (725) | | | | | +--Actinobacteria (54) | | | | | | | +--Coriobacteriia (2) | | | | | | | | | +--Coriobacteriales (2) | | | | | | | | | +--Coriobacteriaceae (1) | | | | | | | | | | | +--Coriobacteriaceae bacterium EMTCatB1 (1) | | | | | | | | | +--Atopobiaceae (1) | | | | | | | | | +--Olsenella scatoligenes (1) | | | | | | | +--Thermoleophilia (1) | | | | | | | | | +--Solirubrobacterales (1) | | | | | | | | | +--Patulibacteraceae (1) | | | | | | | | | +--Patulibacter medicamentivorans (1) | | | | | | | +--Actinobacteria (47) | | | | | | | | | +--Streptomycetales (4) | | | | | | | | | | | +--Streptomycetaceae (4) | | | | | | | | | | | +--Streptomyces sp. CB01249 (2) | | | | | | | | | | | +--Streptomyces sp. MUSC 1 (1) | | | | | | | | | | | +--Streptomyces (1) | | | | | | | | | | | +--Streptomyces scopuliridis RB72 (1) | | | | | | | | | +--Propionibacteriales (2) | | | | | | | | | | | +--Propionibacteriaceae (1) | | | | | | | | | | | | | +--Tessaracoccus (1) | | | | | | | | | | | | | +--Tessaracoccus bendigoensis DSM 12906 (1) | | | | | | | | | | | +--Nocardioidaceae (1) | | | | | | | | | | | +--Aeromicrobium sp. Root472D3 (1) | | | | | | | | | +--Frankiales (1) | | | | | | | | | | | +--Frankiaceae (1) | | | | | | | | | | | +--Jatrophihabitans endophyticus (1) | | | | | | | | | +--Bifidobacteriales (5) | | | | | | | | | | | +--Bifidobacteriaceae (5) | | | | | | | | | | | +--Bifidobacterium (3) | | | | | | | | | | | | | +--Bifidobacterium mongoliense DSM 21395 (3) | | | | | | | | | | | +--Bifidobacterium primatium (1) | | | | | | | | | | | +--Bifidobacterium tissieri (1) | | | | | | | | | +--Corynebacteriales (20) | | | | | | | | | | | +--Nocardiaceae (7) | | | | | | | | | | | | | +--Rhodococcus (2) | | | | | | | | | | | | | | | +--Rhodococcus rhodnii LMG 5362 (1) | | | | | | | | | | | | | | | +--Rhodococcus ruber BKS 20-38 (1) | | | | | | | | | | | | | +--Nocardia (3) | | | | | | | | | | | | | | | +--Nocardia nova SH22a (3) | | | | | | | | | | | | | +--Nocardia donostiensis (1) | | | | | | | | | | | | | +--Rhodococcus sp. EPR-157 (1) | | | | | | | | | | | +--Mycobacteriaceae (6) | | | | | | | | | | | | | +--Mycobacterium talmoniae (4) | | | | | | | | | | | | | +--Mycobacterium (2) | | | | | | | | | | | | | +--Mycobacteriumchelonaegroup (2) | | | | | | | | | | | | | +--Mycobacteriumabscessussubgroup (2) | | | | | | | | | | | | | +--Mycobacterium abscessus subsp. abscessus (2) | | | | | | | | | | | +--Williamsiaceae (3) | | | | | | | | | | | | | +--Williamsia sp. Leaf354 (1) | | | | | | | | | | | | | +--Williamsia sterculiae (2) | | | | | | | | | | | +--Gordoniaceae (4) | | | | | | | | | | | +--Gordonia (4) | | | | | | | | | | | +--Gordonia effusa NBRC 100432 (1) | | | | | | | | | | | +--Gordonia polyisoprenivorans VH2 (1) | | | | | | | | | | | +--Gordonia aichiensis NBRC 108223 (1) | | | | | | | | | | | +--Gordonia rhizosphera NBRC 16068 (1) | | | | | | | | | +--Pseudonocardiales (2) | | | | | | | | | | | +--Pseudonocardiaceae (2) | | | | | | | | | | | +--Pseudonocardia sp. EC080619-01 (1) | | | | | | | | | | | +--Pseudonocardia sp. HH130630-07 (1) | | | | | | | | | +--Micrococcales (13) | | | | | | | | | +--Intrasporangiaceae (9) | | | | | | | | | | | +--Tetrasphaera (3) | | | | | | | | | | | | | +--Tetrasphaera japonica T1-X7 (3) | | | | | | | | | | | +--Humibacillus sp. DSM 29435 (6) | | | | | | | | | +--Cellulomonadaceae (1) | | | | | | | | | | | +--Cellulomonas sp. B6 (1) | | | | | | | | | +--Microbacteriaceae (2) | | | | | | | | | | | +--Leifsonia sp. Leaf336 (1) | | | | | | | | | | | +--Leifsonia sp. Root227 (1) | | | | | | | | | +--Promicromonosporaceae (1) | | | | | | | | | +--Cellulosimicrobium sp. MM (1) | | | | | | | +--Acidimicrobiia (4) | | | | | | | +--Acidimicrobiales (4) | | | | | | | +--Microthrixaceae (1) | | | | | | | | | +--CandidatusMicrothrix (1) | | | | | | | | | +--Candidatus Microthrix parvicella RN1 (1) | | | | | | | +--Acidimicrobiaceae (3) | | | | | | | +--Ferrimicrobium (2) | | | | | | | | | +--Ferrimicrobium acidiphilum DSM 19497 (2) | | | | | | | +--Acidithrix ferrooxidans (1) | | | | | +--Mycoplasmatota (2) | | | | | | | +--Mollicutes (1) | | | | | | | | | +--Acholeplasmatales (1) | | | | | | | | | +--Acholeplasmataceae (1) | | | | | | | | | +--Mariniplasma anaerobium (1) | | | | | | | +--CandidatusIzimaplasma (1) | | | | | | | +--Candidatus Izimaplasma bacterium ZiA1 (1) | | | | | +--Deinococcota (2) | | | | | | | +--Deinococci (2) | | | | | | | +--Thermales (2) | | | | | | | +--Thermaceae (2) | | | | | | | +--Meiothermus (1) | | | | | | | | | +--Meiothermus granaticius NBRC 107808 (1) | | | | | | | +--Calidithermus roseus (1) | | | | | +--Armatimonadetes (2) | | | | | | | +--Chthonomonadetes (2) | | | | | | | +--Chthonomonadales (2) | | | | | | | +--Chthonomonadaceae (2) | | | | | | | +--Chthonomonas (2) | | | | | | | +--Chthonomonas calidirosea T49 (2) | | | | | +--Chloroflexota (12) | | | | | | | +--Caldilineae (1) | | | | | | | | | +--Caldilineales (1) | | | | | | | | | +--Caldilineaceae (1) | | | | | | | | | +--Litorilinea aerophila (1) | | | | | | | +--Ktedonobacteria (10) | | | | | | | | | +--Thermogemmatisporales (3) | | | | | | | | | | | +--Thermogemmatisporaceae (3) | | | | | | | | | | | +--Thermogemmatispora tikiterensis (3) | | | | | | | | | +--Ktedonobacterales (7) | | | | | | | | | +--Ktedonosporobacteraceae (1) | | | | | | | | | | | +--Ktedonosporobacter rubrisoli (1) | | | | | | | | | +--Ktedonobacteraceae (1) | | | | | | | | | | | +--Ktedonospora formicarum (1) | | | | | | | | | +--Reticulibacteraceae (1) | | | | | | | | | | | +--Reticulibacter mediterranei (1) | | | | | | | | | +--Dictyobacteraceae (4) | | | | | | | | | +--Dictyobacter kobayashii (1) | | | | | | | | | +--Dictyobacter aurantiacus (1) | | | | | | | | | +--Dictyobacter vulcani (1) | | | | | | | | | +--Dictyobacter alpinus (1) | | | | | | | +--Thermoflexia (1) | | | | | | | +--Thermoflexales (1) | | | | | | | +--Thermoflexaceae (1) | | | | | | | +--Candidatus Thermoflexus japonica (1) | | | | | +--Cyanobacteriota/Melainabacteriagroup (35) | | | | | | | +--Cyanobacteriota (35) | | | | | | | +--filamentous cyanobacterium CCP2 (1) | | | | | | | +--Cyanophyceae (34) | | | | | | | +--Leptolyngbyales (5) | | | | | | | | | +--Leptolyngbyaceae (4) | | | | | | | | | | | +--Leptolyngbyaceae cyanobacterium M65_K2018_010 (1) | | | | | | | | | | | +--Myxacorys (1) | | | | | | | | | | | | | +--Myxacorys almedinensis A (1) | | | | | | | | | | | +--Leptolyngbyagroup (1) | | | | | | | | | | | | | +--Leptolyngbya (1) | | | | | | | | | | | | | +--Leptolyngbya sp. BL0902 (1) | | | | | | | | | | | +--Leptolyngbyaceae cyanobacterium T60_A2020_046 (1) | | | | | | | | | +--Trichocoleusaceae (1) | | | | | | | | | +--Trichocoleus (1) | | | | | | | | | +--Trichocoleus sp. FACHB-832 (1) | | | | | | | +--Oculatellales (4) | | | | | | | | | +--Oculatellaceae (4) | | | | | | | | | +--Oculatella (2) | | | | | | | | | | | +--Oculatella sp. FACHB-28 (1) | | | | | | | | | | | +--Oculatella sp. LEGE 06141 (1) | | | | | | | | | +--Thermocoleostomius (2) | | | | | | | | | +--Thermocoleostomius sinensis A174 (2) | | | | | | | +--Pleurocapsales (1) | | | | | | | | | +--Pleurocapsales cyanobacterium LEGE 06147 (1) | | | | | | | +--Nostocales (14) | | | | | | | | | +--Nostocales cyanobacterium LEGE 11386 (1) | | | | | | | | | +--Nostocaceae (5) | | | | | | | | | | | +--Atlanticothrix (1) | | | | | | | | | | | | | +--Atlanticothrix silvestris CENA357 (1) | | | | | | | | | | | +--Nostoc (4) | | | | | | | | | | | +--unclassifiedNostoc (1) | | | | | | | | | | | | | +--Nostoc sp. 'Peltigera malacea cyanobiont' DB3992 (1) | | | | | | | | | | | +--Nostoc sphaeroides CCNUC1 (1) | | | | | | | | | | | +--Nostoc sp. FACHB-888 (1) | | | | | | | | | | | +--Nostoc sp. ATCC 43529 (1) | | | | | | | | | +--Nostocales cyanobacterium HT-58-2 (1) | | | | | | | | | +--Fortieaceae (1) | | | | | | | | | | | +--Roholtiella (1) | | | | | | | | | | | +--aff. Roholtiella sp. LEGE 12411 (1) | | | | | | | | | +--Cyanomargaritaceae (1) | | | | | | | | | | | +--Cyanomargarita (1) | | | | | | | | | | | +--Cyanomargarita calcarea GSE-NOS-MK-12-04C (1) | | | | | | | | | +--Calotrichaceae (5) | | | | | | | | | +--Calothrix (5) | | | | | | | | | +--Calothrix sp. C42_A2020_038 (2) | | | | | | | | | +--Calothrix sp. NIES-4101 (1) | | | | | | | | | +--Calothrix sp. NIES-3974 (2) | | | | | | | +--Pseudanabaenales (2) | | | | | | | | | +--Pseudanabaenaceae (2) | | | | | | | | | +--Pseudanabaena (2) | | | | | | | | | +--Pseudanabaena sp. FACHB-2040 (1) | | | | | | | | | +--Pseudanabaena sp. SR411 (1) | | | | | | | +--Synechococcales (5) | | | | | | | | | +--Synechococcales cyanobacterium M55_K2018_004 (1) | | | | | | | | | +--Synechococcales cyanobacterium C42_A2020_086 (4) | | | | | | | +--Oscillatoriophycideae (2) | | | | | | | | | +--Oscillatoriales (2) | | | | | | | | | +--Oscillatoriaceae (1) | | | | | | | | | | | +--Oscillatoriaceae cyanobacterium M33_DOE_052 (1) | | | | | | | | | +--Microcoleaceae (1) | | | | | | | | | +--Oxynema (1) | | | | | | | | | +--Oxynema aestuarii AP17 (1) | | | | | | | +--Coleofasciculales (1) | | | | | | | +--Coleofasciculaceae (1) | | | | | | | +--Coleofasciculus (1) | | | | | | | +--Coleofasciculus sp. LEGE 07092 (1) | | | | | +--Cyanobacteria/Melainabacteriagroup (6) | | | | | | | +--Cyanobacteria (6) | | | | | | | +--Nostocales (1) | | | | | | | | | +--Nostocaceae (1) | | | | | | | | | +--Nostoc sp. PCC 7107 (1) | | | | | | | +--Oscillatoriophycideae (5) | | | | | | | +--Oscillatoriales (4) | | | | | | | | | +--Oscillatoriaceae (1) | | | | | | | | | | | +--Phormidium (1) | | | | | | | | | | | +--Phormidium tenue NIES-30 (1) | | | | | | | | | +--Coleofasciculaceae (1) | | | | | | | | | | | +--Geitlerinema sp. PCC 7407 (1) | | | | | | | | | +--Microcoleaceae (1) | | | | | | | | | | | +--Planktothricoides sp. SR001 (1) | | | | | | | | | +--Desertifilaceae (1) | | | | | | | | | +--Desertifilum sp. IPPAS B-1220 (1) | | | | | | | +--Chroococcales (1) | | | | | | | +--Chroococcaceae (1) | | | | | | | +--Gloeocapsa sp. PCC 7428 (1) | | | | | +--Actinomycetota (104) | | | | | | | +--Coriobacteriia (1) | | | | | | | | | +--Coriobacteriales (1) | | | | | | | | | +--Atopobiaceae (1) | | | | | | | | | +--Thermophilibacter immobilis (1) | | | | | | | +--Acidimicrobiia (5) | | | | | | | | | +--Acidimicrobiales (2) | | | | | | | | | | | +--Iamiaceae (2) | | | | | | | | | | | +--Actinomarinicola tropica (1) | | | | | | | | | | | +--Aquihabitans (1) | | | | | | | | | | | +--Aquihabitans sp. G128 (1) | | | | | | | | | +--Acidimicrobiia bacterium (3) | | | | | | | +--Nitriliruptoria (1) | | | | | | | | | +--Nitriliruptorales (1) | | | | | | | | | +--Nitriliruptorales bacterium (1) | | | | | | | +--Actinomycetes (97) | | | | | | | +--Actinomycetales (1) | | | | | | | | | +--Actinomycetaceae (1) | | | | | | | | | +--Ancrocorticia populi (1) | | | | | | | +--Kitasatosporales (17) | | | | | | | | | +--Streptomycetaceae (17) | | | | | | | | | +--Streptomyces formicae (1) | | | | | | | | | +--Streptomyces (16) | | | | | | | | | +--Streptomyces sp. GMY02 (6) | | | | | | | | | +--Streptomyces sp. SID10815 (1) | | | | | | | | | +--Streptomyces sp. SID4985 (1) | | | | | | | | | +--Streptomyces sp. SAT1 (5) | | | | | | | | | +--Streptomyces sp. RG38 (1) | | | | | | | | | +--Streptomyces sp. TS71-3 (2) | | | | | | | +--Geodermatophilales (1) | | | | | | | | | +--Antricoccaceae (1) | | | | | | | | | +--Antricoccus suffuscus (1) | | | | | | | +--Propionibacteriales (15) | | | | | | | | | +--Nocardioidaceae (1) | | | | | | | | | | | +--Solicola gregarius (1) | | | | | | | | | +--Propionibacteriaceae (14) | | | | | | | | | +--Raineyella antarctica (1) | | | | | | | | | +--Acidipropionibacterium virtanenii (1) | | | | | | | | | +--Microlunatus endophyticus (6) | | | | | | | | | +--Microlunatus elymi (1) | | | | | | | | | +--Raineyella fluvialis (1) | | | | | | | | | +--Tessaracoccus antarcticus (1) | | | | | | | | | +--Microlunatus kandeliicorticis (3) | | | | | | | +--Micromonosporales (2) | | | | | | | | | +--Micromonosporaceae (2) | | | | | | | | | +--Mangrovihabitans endophyticus (1) | | | | | | | | | +--Plantactinospora (1) | | | | | | | | | +--Plantactinospora sp. KBS50 (1) | | | | | | | +--Mycobacteriales (12) | | | | | | | | | +--Nocardiaceae (1) | | | | | | | | | | | +--Rhodococcus (1) | | | | | | | | | | | +--Rhodococcus sp. SMB37 (1) | | | | | | | | | +--Mycobacteriaceae (5) | | | | | | | | | | | +--Mycobacterium pseudokansasii (2) | | | | | | | | | | | +--Mycobacterium helveticum (1) | | | | | | | | | | | +--Mycolicibacterium (2) | | | | | | | | | | | +--Mycolicibacterium sp. P9-64 (1) | | | | | | | | | | | +--Mycolicibacterium sp. TUM20983 (1) | | | | | | | | | +--Gordoniaceae (6) | | | | | | | | | +--Gordonia asplenii (4) | | | | | | | | | +--Gordonia mangrovi (1) | | | | | | | | | +--Gordonia jinhuaensis (1) | | | | | | | +--Bifidobacteriales (5) | | | | | | | | | +--Bifidobacteriaceae (5) | | | | | | | | | +--Bifidobacterium canis (1) | | | | | | | | | +--Bifidobacterium aquikefiri (3) | | | | | | | | | +--Bifidobacterium simiarum (1) | | | | | | | +--Pseudonocardiales (12) | | | | | | | | | +--Pseudonocardiaceae (12) | | | | | | | | | +--Amycolatopsis (9) | | | | | | | | | | | +--Amycolatopsis sp. FDAARGOS 1241 (2) | | | | | | | | | | | +--Amycolatopsis sp. M39 (7) | | | | | | | | | +--Pseudonocardia sediminis (2) | | | | | | | | | +--Actinomycetospora (1) | | | | | | | | | +--Actinomycetospora sp. TBRC 11914 (1) | | | | | | | +--Streptosporangiales (1) | | | | | | | | | +--Streptosporangiales bacterium (1) | | | | | | | +--Micrococcales (31) | | | | | | | +--Dermabacteraceae (1) | | | | | | | | | +--Brachybacterium endophyticum (1) | | | | | | | +--Micrococcaceae (7) | | | | | | | | | +--Arthrobacter terrae (2) | | | | | | | | | +--Pseudarthrobacter (1) | | | | | | | | | | | +--Pseudarthrobacter sp. (1) | | | | | | | | | +--Arthrobacter (4) | | | | | | | | | +--Arthrobacter sp. Bz4 (1) | | | | | | | | | +--Arthrobacter sp. PAMC25564 (1) | | | | | | | | | +--Arthrobacter sp. ISL-48 (2) | | | | | | | +--Dermatophilaceae (1) | | | | | | | | | +--Dermatophilaceae bacterium (1) | | | | | | | +--Microbacteriaceae (10) | | | | | | | | | +--Humibacter ginsenosidimutans (6) | | | | | | | | | +--Planctomonas (1) | | | | | | | | | | | +--Planctomonas sp. JC2975 (1) | | | | | | | | | +--Cryobacterium (1) | | | | | | | | | | | +--Cryobacterium sp. SO1 (1) | | | | | | | | | +--Amnibacterium setariae (1) | | | | | | | | | +--Gryllotalpicola protaetiae (1) | | | | | | | +--Micrococcalesincertaesedis (2) | | | | | | | | | +--Luteimicrobium xylanilyticum (1) | | | | | | | | | +--Pengzhenrongella sicca (1) | | | | | | | +--Dermacoccaceae (8) | | | | | | | | | +--Flexivirga oryzae (2) | | | | | | | | | +--Flexivirga caeni (5) | | | | | | | | | +--Flexivirga endophytica (1) | | | | | | | +--Promicromonosporaceae (2) | | | | | | | +--Cellulosimicrobium arenosum (1) | | | | | | | +--Xylanimonas allomyrinae (1) | | | | | +--Armatimonadota (1) | | | | | | | +--Armatimonadia (1) | | | | | | | +--Capsulimonadales (1) | | | | | | | +--Capsulimonadaceae (1) | | | | | | | +--Capsulimonas corticalis (1) | | | | | +--Chloroflexi (8) | | | | | | | +--Caldilineae (1) | | | | | | | | | +--Caldilineales (1) | | | | | | | | | +--Caldilineaceae (1) | | | | | | | | | +--Caldilinea (1) | | | | | | | | | +--Caldilinea aerophila DSM 14535 = NBRC 104270 (1) | | | | | | | +--Dehalococcoidia (1) | | | | | | | | | +--Dehalogenimonas alkenigignens (1) | | | | | | | +--Anaerolineae (6) | | | | | | | +--Anaerolineales (6) | | | | | | | +--Anaerolineaceae (6) | | | | | | | +--Ornatilinea apprima (6) | | | | | +--Firmicutes (194) | | | | | | | +--Limnochordia (1) | | | | | | | | | +--Limnochordales (1) | | | | | | | | | +--Limnochordaceae (1) | | | | | | | | | +--Limnochorda pilosa (1) | | | | | | | +--Firmicutes bacterium CAG:145 (1) | | | | | | | +--Firmicutes bacterium CAG:308 (1) | | | | | | | +--Firmicutes bacterium CAG:41 (1) | | | | | | | +--Erysipelotrichia (3) | | | | | | | | | +--Erysipelotrichales (3) | | | | | | | | | +--Erysipelotrichaceae (3) | | | | | | | | | +--Turicibacter sp. H121 (1) | | | | | | | | | +--unclassifiedErysipelotrichaceae (1) | | | | | | | | | | | +--Erysipelotrichaceae bacterium MTC7 (1) | | | | | | | | | +--Erysipelothrix larvae (1) | | | | | | | +--Clostridia (98) | | | | | | | | | +--Thermoanaerobacterales (6) | | | | | | | | | | | +--Thermodesulfobiaceae (1) | | | | | | | | | | | | | +--Thermodesulfobium (1) | | | | | | | | | | | | | +--Thermodesulfobium narugense DSM 14796 (1) | | | | | | | | | | | +--Thermoanaerobacteraceae (5) | | | | | | | | | | | +--Thermanaeromonas (2) | | | | | | | | | | | | | +--Thermanaeromonas toyohensis ToBE (2) | | | | | | | | | | | +--Caldanaerobius (3) | | | | | | | | | | | +--Caldanaerobius fijiensis DSM 17918 (3) | | | | | | | | | +--Halanaerobiales (2) | | | | | | | | | | | +--Halanaerobiaceae (1) | | | | | | | | | | | | | +--Halanaerobium (1) | | | | | | | | | | | | | +--Halanaerobiumsaccharolyticum (1) | | | | | | | | | | | | | +--Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 (1) | | | | | | | | | | | +--Halobacteroidaceae (1) | | | | | | | | | | | +--Orenia metallireducens (1) | | | | | | | | | +--Clostridiales (90) | | | | | | | | | +--Ruminococcaceae (12) | | | | | | | | | | | +--Sporobacter (1) | | | | | | | | | | | | | +--Sporobacter termitidis DSM 10068 (1) | | | | | | | | | | | +--Ruminococcaceae bacterium CPB6 (1) | | | | | | | | | | | +--Ruminiclostridium (2) | | | | | | | | | | | | | +--[Clostridium] termitidis CT1112 (1) | | | | | | | | | | | | | +--[Clostridium] clariflavum DSM 19732 (1) | | | | | | | | | | | +--Anaerotruncus (1) | | | | | | | | | | | | | +--Anaerotruncus sp. CAG:390 (1) | | | | | | | | | | | +--Papillibacter (1) | | | | | | | | | | | | | +--Papillibacter cinnamivorans DSM 12816 (1) | | | | | | | | | | | +--Ruminococcus (6) | | | | | | | | | | | +--Ruminococcus sp. CAG:330 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:57 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:353 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:403 (1) | | | | | | | | | | | +--Ruminococcus torques CAG:61 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:108 (1) | | | | | | | | | +--Lachnospiraceae (12) | | | | | | | | | | | +--Lachnoclostridium sp. An14 (1) | | | | | | | | | | | +--Dorea (1) | | | | | | | | | | | | | +--Dorea formicigenerans CAG:28 (1) | | | | | | | | | | | +--Coprococcus (1) | | | | | | | | | | | | | +--Coprococcus sp. CAG:782 (1) | | | | | | | | | | | +--Robinsoniella sp. RHS (1) | | | | | | | | | | | +--Anaerocolumna (1) | | | | | | | | | | | | | +--Anaerocolumna jejuensis DSM 15929 (1) | | | | | | | | | | | +--Roseburia (4) | | | | | | | | | | | | | +--Roseburia sp. CAG:303 (1) | | | | | | | | | | | | | +--Roseburia sp. CAG:18 (1) | | | | | | | | | | | | | +--Roseburia sp. CAG:309 (1) | | | | | | | | | | | | | +--Roseburia sp. CAG:182 (1) | | | | | | | | | | | +--Blautia (2) | | | | | | | | | | | | | +--Blautia sp. CAG:257 (2) | | | | | | | | | | | +--Blautia sp. YL58 (1) | | | | | | | | | +--Peptococcaceae (5) | | | | | | | | | | | +--Peptococcaceae bacterium SCADC1_2_3 (2) | | | | | | | | | | | +--Desulfotomaculum (1) | | | | | | | | | | | | | +--Desulfotomaculum hydrothermale Lam5 = DSM 18033 (1) | | | | | | | | | | | +--Desulfosporosinus sp. OL (1) | | | | | | | | | | | +--Desulfotomaculum copahuensis (1) | | | | | | | | | +--unclassifiedClostridiales (7) | | | | | | | | | | | +--Clostridiales bacterium CHKCI001 (1) | | | | | | | | | | | +--Gottschalkia (1) | | | | | | | | | | | | | +--[Clostridium] acidurici 9a (1) | | | | | | | | | | | +--Clostridiales bacterium KA00274 (1) | | | | | | | | | | | +--Clostridiales bacterium PH28_bin88 (2) | | | | | | | | | | | +--Clostridiales bacterium KA00134 (1) | | | | | | | | | | | +--Clostridiales bacterium KLE1615 (1) | | | | | | | | | +--Peptostreptococcaceae (4) | | | | | | | | | | | +--Peptoclostridium (2) | | | | | | | | | | | | | +--Peptoclostridium litorale DSM 5388 (1) | | | | | | | | | | | | | +--Peptoclostridium acidaminophilum DSM 3953 (1) | | | | | | | | | | | +--Terrisporobacter othiniensis (1) | | | | | | | | | | | +--Paraclostridium benzoelyticum (1) | | | | | | | | | +--Eubacteriaceae (7) | | | | | | | | | | | +--Eubacterium (5) | | | | | | | | | | | | | +--Eubacterium sp. CAG:603 (1) | | | | | | | | | | | | | +--Eubacterium sp. CAG:274 (1) | | | | | | | | | | | | | +--Eubacterium sp. CAG:202 (1) | | | | | | | | | | | | | +--Eubacterium sp. CAG:38 (1) | | | | | | | | | | | | | +--Eubacterium sp. CAG:86 (1) | | | | | | | | | | | +--Acetobacterium (2) | | | | | | | | | | | +--Acetobacterium woodii DSM 1030 (2) | | | | | | | | | +--Clostridiaceae (43) | | | | | | | | | +--Clostridium sp. BL8 (1) | | | | | | | | | +--Clostridium (27) | | | | | | | | | | | +--Clostridium sp. CAG:265 (1) | | | | | | | | | | | +--Clostridium sp. CAG:7 (1) | | | | | | | | | | | +--Clostridium sp. CAG:307 (2) | | | | | | | | | | | +--Clostridium argentinense CDC 2741 (1) | | | | | | | | | | | +--Clostridium sp. CAG:299 (1) | | | | | | | | | | | +--Clostridium acidisoli DSM 12555 (1) | | | | | | | | | | | +--Clostridium intestinale URNW (2) | | | | | | | | | | | +--Clostridium colicanis 209318 (2) | | | | | | | | | | | +--Clostridium colicanis DSM 13634 (1) | | | | | | | | | | | +--Clostridium sp. CAG:510 (1) | | | | | | | | | | | +--Clostridium sp. CAG:590 (1) | | | | | | | | | | | +--Clostridium magnum DSM 2767 (1) | | | | | | | | | | | +--Clostridium tyrobutyricum DIVETGP (1) | | | | | | | | | | | +--Clostridium sp. CAG:1013 (1) | | | | | | | | | | | +--Clostridium saccharobutylicum DSM 13864 (2) | | | | | | | | | | | +--Clostridium homopropionicum DSM 5847 (2) | | | | | | | | | | | +--Clostridium chauvoei JF4335 (1) | | | | | | | | | | | +--Clostridium collagenovorans DSM 3089 (1) | | | | | | | | | | | +--Clostridium celatum DSM 1785 (1) | | | | | | | | | | | +--Clostridium pasteurianum DSM 525 = ATCC 6013 (1) | | | | | | | | | | | +--Clostridium cylindrosporum DSM 605 (1) | | | | | | | | | | | +--Clostridium sp. CAG:230 (1) | | | | | | | | | +--Geosporobacter ferrireducens (3) | | | | | | | | | +--Paramaledivibacter (1) | | | | | | | | | | | +--Paramaledivibacter caminithermalis DSM 15212 (1) | | | | | | | | | +--Thermobrachium (2) | | | | | | | | | | | +--Thermobrachium celere DSM 8682 (2) | | | | | | | | | +--Clostridium sp. N3C (1) | | | | | | | | | +--Fervidicella (1) | | | | | | | | | | | +--Fervidicella metallireducens AeB (1) | | | | | | | | | +--Clostridium amylolyticum (1) | | | | | | | | | +--Hathewaya (1) | | | | | | | | | | | +--Hathewaya proteolytica DSM 3090 (1) | | | | | | | | | +--Butyricicoccus (1) | | | | | | | | | | | +--Butyricicoccus pullicaecorum 1.2 (1) | | | | | | | | | +--Clostridium sp. Maddingley MBC34-26 (3) | | | | | | | | | +--Clostridium sp. FS41 (1) | | | | | | | +--Bacilli (70) | | | | | | | | | +--Lactobacillales (44) | | | | | | | | | | | +--Streptococcaceae (4) | | | | | | | | | | | | | +--Streptococcus sp. DD10 (1) | | | | | | | | | | | | | +--Streptococcus varani (1) | | | | | | | | | | | | | +--Lactococcus (2) | | | | | | | | | | | | | +--Lactococcuslactis (2) | | | | | | | | | | | | | +--Lactococcus lactis subsp. cremoris TIFN6 (2) | | | | | | | | | | | +--Carnobacteriaceae (6) | | | | | | | | | | | | | +--Jeotgalibaca sp. PTS2502 (1) | | | | | | | | | | | | | +--Atopostipes (1) | | | | | | | | | | | | | | | +--Atopostipes suicloacalis DSM 15692 (1) | | | | | | | | | | | | | +--Marinilactibacillus sp. 15R (1) | | | | | | | | | | | | | +--Dolosigranulum (1) | | | | | | | | | | | | | | | +--Dolosigranulum pigrum ATCC 51524 (1) | | | | | | | | | | | | | +--Alkalibacterium sp. 20 (1) | | | | | | | | | | | | | +--Carnobacterium sp. CP1 (1) | | | | | | | | | | | +--Enterococcaceae (12) | | | | | | | | | | | | | +--Enterococcus sp. 9E7_DIV0242 (2) | | | | | | | | | | | | | +--Enterococcus (8) | | | | | | | | | | | | | | | +--Enterococcus dispar ATCC 51266 (1) | | | | | | | | | | | | | | | +--Enterococcus asini ATCC 700915 (2) | | | | | | | | | | | | | | | +--Enterococcus cecorum DSM 20682 = ATCC 43198 (1) | | | | | | | | | | | | | | | +--Enterococcussaccharolyticus (1) | | | | | | | | | | | | | | | | | +--Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076 (1) | | | | | | | | | | | | | | | +--Enterococcus pallens ATCC BAA-351 (1) | | | | | | | | | | | | | | | +--Enterococcus phoeniculicola ATCC BAA-412 (1) | | | | | | | | | | | | | | | +--Enterococcus columbae DSM 7374 = ATCC 51263 (1) | | | | | | | | | | | | | +--Tetragenococcus (1) | | | | | | | | | | | | | | | +--Tetragenococcus muriaticus 3MR10-3 (1) | | | | | | | | | | | | | +--Enterococcus sp. 10A9_DIV0425 (1) | | | | | | | | | | | +--Lactobacillaceae (18) | | | | | | | | | | | | | +--Lactobacillus (16) | | | | | | | | | | | | | | | +--Lactobacillus hilgardii DSM 20176 = ATCC 8290 (1) | | | | | | | | | | | | | | | +--Lactobacillus versmoldensis DSM 14857 = KCTC 3814 (2) | | | | | | | | | | | | | | | +--Lactobacillus capillatus DSM 19910 (1) | | | | | | | | | | | | | | | +--Lactobacillus perolens DSM 12744 (2) | | | | | | | | | | | | | | | +--Lactobacillus bifermentans DSM 20003 (1) | | | | | | | | | | | | | | | +--Lactobacillus floricola DSM 23037 = JCM 16512 (1) | | | | | | | | | | | | | | | +--Lactobacillus rossiae DSM 15814 (1) | | | | | | | | | | | | | | | +--Lactobacillus vini DSM 20605 (2) | | | | | | | | | | | | | | | +--Lactobacillus thailandensis DSM 22698 = JCM 13996 (1) | | | | | | | | | | | | | | | +--Lactobacillus composti DSM 18527 = JCM 14202 (1) | | | | | | | | | | | | | | | +--Lactobacillus camelliae DSM 22697 = JCM 13995 (3) | | | | | | | | | | | | | +--Pediococcus (2) | | | | | | | | | | | | | +--Pediococcus claussenii ATCC BAA-344 (2) | | | | | | | | | | | +--Aerococcaceae (4) | | | | | | | | | | | +--Facklamia (3) | | | | | | | | | | | | | +--Facklamia languida CCUG 37842 (1) | | | | | | | | | | | | | +--Facklamia ignava CCUG 37419 (1) | | | | | | | | | | | | | +--Facklamia hominis CCUG 36813 (1) | | | | | | | | | | | +--Globicatella sp. HMSC072A10 (1) | | | | | | | | | +--Bacillales (25) | | | | | | | | | | | +--Alicyclobacillaceae (7) | | | | | | | | | | | | | +--Alicyclobacillus (2) | | | | | | | | | | | | | | | +--Alicyclobacillus acidoterrestris ATCC 49025 (2) | | | | | | | | | | | | | +--Alicyclobacillus sp. USBA-503 (5) | | | | | | | | | | | +--Bacillaceae (7) | | | | | | | | | | | | | +--Parageobacillus (1) | | | | | | | | | | | | | | | +--Parageobacillus caldoxylosilyticus NBRC 107762 (1) | | | | | | | | | | | | | +--Anoxybacillus sp. B7M1 (1) | | | | | | | | | | | | | +--Bacillus sp. SGD-V-76 (1) | | | | | | | | | | | | | +--Tepidibacillus decaturensis (1) | | | | | | | | | | | | | +--Bacillus (3) | | | | | | | | | | | | | +--Bacillus smithii 7_3_47FAA (1) | | | | | | | | | | | | | +--Bacillus bataviensis LMG 21833 (1) | | | | | | | | | | | | | +--Bacillus vireti LMG 21834 (1) | | | | | | | | | | | +--Paenibacillaceae (10) | | | | | | | | | | | | | +--Paenibacillus (1) | | | | | | | | | | | | | | | +--Paenibacillus pini JCM 16418 (1) | | | | | | | | | | | | | +--Paenibacillus bovis (1) | | | | | | | | | | | | | +--Paenibacillus sp. TI45-13ar (1) | | | | | | | | | | | | | +--Paenibacillus sp. FSL R7-0331 (1) | | | | | | | | | | | | | +--Paenibacillus sp. JCM 10914 (1) | | | | | | | | | | | | | +--Saccharibacillus (1) | | | | | | | | | | | | | | | +--Saccharibacillus sacchari DSM 19268 (1) | | | | | | | | | | | | | +--Paenibacillus sp. FSL R5-0912 (1) | | | | | | | | | | | | | +--Paenibacillus yonginensis (1) | | | | | | | | | | | | | +--Paenibacillus aquistagni (1) | | | | | | | | | | | | | +--Paenibacillus sp. FSL H7-0737 (1) | | | | | | | | | | | +--Sporolactobacillaceae (1) | | | | | | | | | | | +--Sporolactobacillus (1) | | | | | | | | | | | +--Sporolactobacillus laevolacticus DSM 442 (1) | | | | | | | | | +--unclassifiedBacilli (1) | | | | | | | | | +--Bacilli bacterium VT-13-104 (1) | | | | | | | +--Firmicutes bacterium CAG:56 (1) | | | | | | | +--Firmicutes bacterium CAG:345 (1) | | | | | | | +--Negativicutes (10) | | | | | | | | | +--Selenomonadales (7) | | | | | | | | | | | +--Sporomusaceae (7) | | | | | | | | | | | +--Sporomusa (2) | | | | | | | | | | | | | +--Sporomusa sphaeroides DSM 2875 (2) | | | | | | | | | | | +--Propionispora sp. 2/2-37 (5) | | | | | | | | | +--Veillonellales (3) | | | | | | | | | +--Veillonellaceae (3) | | | | | | | | | +--Dialister (2) | | | | | | | | | | | +--Dialister sp. CAG:357 (1) | | | | | | | | | | | +--Dialister succinatiphilus YIT 11850 (1) | | | | | | | | | +--Megasphaera (1) | | | | | | | | | +--Megasphaera cerevisiae DSM 20462 (1) | | | | | | | +--Firmicutes bacterium CAG:555 (1) | | | | | | | +--Tissierellia (5) | | | | | | | | | +--Tissierellales (3) | | | | | | | | | | | +--Sporanaerobacter sp. PP17-6a (1) | | | | | | | | | | | +--Sporanaerobacter (1) | | | | | | | | | | | | | +--Sporanaerobacter acetigenes DSM 13106 (1) | | | | | | | | | | | +--Tissierellaceae (1) | | | | | | | | | | | +--Tissierella (1) | | | | | | | | | | | +--Tissierella creatinophila DSM 6911 (1) | | | | | | | | | +--unclassifiedTissierellia (2) | | | | | | | | | +--Dethiosulfatibacter (1) | | | | | | | | | | | +--Dethiosulfatibacter aminovorans DSM 17477 (1) | | | | | | | | | +--[Clostridium] ultunense Esp (1) | | | | | | | +--Firmicutes bacterium CAG:194 (1) | | | | | +--Tenericutes (2) | | | | | | | +--Candidatus Izimaplasma sp. HR1 (1) | | | | | | | +--Candidatus Izimaplasma sp. HR2 (1) | | | | | +--Bacillota (303) | | | | | +--Clostridia (174) | | | | | | | +--Christensenellales (2) | | | | | | | | | +--Christensenellaceae (2) | | | | | | | | | +--Candidatus Borkfalkia ceftriaxoniphila (1) | | | | | | | | | +--Luoshenia tenuis (1) | | | | | | | +--Eubacteriales (109) | | | | | | | | | +--Acutalibacteraceae (8) | | | | | | | | | | | +--Caproiciproducens (1) | | | | | | | | | | | | | +--Caproiciproducens sp. NJN-50 (1) | | | | | | | | | | | +--Caproicibacter fermentans (5) | | | | | | | | | | | +--Anaeromassilibacillus (2) | | | | | | | | | | | +--Anaeromassilibacillus sp. An200 (1) | | | | | | | | | | | +--Anaeromassilibacillus sp. An172 (1) | | | | | | | | | +--Eubacterialesincertaesedis (10) | | | | | | | | | | | +--Gemmiger (2) | | | | | | | | | | | | | +--Gemmiger sp. An194 (1) | | | | | | | | | | | | | +--Gemmiger sp. An120 (1) | | | | | | | | | | | +--ClostridialesFamilyXVII.IncertaeSedis (5) | | | | | | | | | | | | | +--Sulfobacillus (2) | | | | | | | | | | | | | | | +--Sulfobacillus thermosulfidooxidans (strain DSM 9293 / VKM B-1269 / AT-1) (2) | | | | | | | | | | | | | +--Sulfobacillus harzensis (3) | | | | | | | | | | | +--Anaerotalea alkaliphila (1) | | | | | | | | | | | +--EubacterialesFamilyXIII.IncertaeSedis (2) | | | | | | | | | | | +--Sinanaerobacter chloroacetimidivorans (1) | | | | | | | | | | | +--Hominibacterium faecale (1) | | | | | | | | | +--Desulfallaceae (3) | | | | | | | | | | | +--Desulfoscipio (2) | | | | | | | | | | | | | +--Desulfoscipio geothermicus DSM 3669 (2) | | | | | | | | | | | +--Desulfallas (1) | | | | | | | | | | | +--Desulfallas thermosapovorans DSM 6562 (1) | | | | | | | | | +--Butyricicoccaceae (2) | | | | | | | | | | | +--Agathobaculum faecis (1) | | | | | | | | | | | +--Butyricicoccus (1) | | | | | | | | | | | +--Butyricicoccus sp. TM10-16AC (1) | | | | | | | | | +--Desulfotomaculaceae (6) | | | | | | | | | | | +--Pelotomaculum (6) | | | | | | | | | | | +--Pelotomaculum isophthalicicum JI (6) | | | | | | | | | +--Proteinivoraceae (2) | | | | | | | | | | | +--Anaerobranca (1) | | | | | | | | | | | | | +--Anaerobranca californiensis DSM 14826 (1) | | | | | | | | | | | +--Alkalicella caledoniensis (1) | | | | | | | | | +--Eubacteriaceae (5) | | | | | | | | | | | +--Eubacterium (3) | | | | | | | | | | | | | +--Eubacterium sp. CAG:115 (1) | | | | | | | | | | | | | +--Eubacterium sp. AF36-5BH (1) | | | | | | | | | | | | | +--Eubacterium sp. AF22-8LB (1) | | | | | | | | | | | +--Eubacteriaceae bacterium Marseille-Q4139 (1) | | | | | | | | | | | +--Alkalibacter rhizosphaerae (1) | | | | | | | | | +--Clostridiaceae (33) | | | | | | | | | | | +--Caloramator (5) | | | | | | | | | | | | | +--Caloramator sp. E03 (5) | | | | | | | | | | | +--Crassaminicella thermophila (1) | | | | | | | | | | | +--Clostridium thailandense (1) | | | | | | | | | | | +--Senegalia massiliensis (1) | | | | | | | | | | | +--Anaeromonas frigoriresistens (1) | | | | | | | | | | | +--Clostridiaceae bacterium AF18-31LB (1) | | | | | | | | | | | +--Clostridium senegalense (1) | | | | | | | | | | | +--Proteiniclasticum aestuarii (1) | | | | | | | | | | | +--Clostridiaceae bacterium 14S0207 (2) | | | | | | | | | | | +--Clostridium fungisolvens (1) | | | | | | | | | | | +--Clostridium (9) | | | | | | | | | | | | | +--Clostridium sp. 'deep sea' (1) | | | | | | | | | | | | | +--Clostridium sp. chh4-2 (1) | | | | | | | | | | | | | +--Clostridium sp. KNHs216 (3) | | | | | | | | | | | | | +--Clostridium sp. CT7 (1) | | | | | | | | | | | | | +--Clostridium sp. DSM 8431 (1) | | | | | | | | | | | | | +--Clostridium sp. AM58-1XD (1) | | | | | | | | | | | | | +--Clostridium sp. SM-530-WT-3G (1) | | | | | | | | | | | +--Proteiniclasticum sediminis (1) | | | | | | | | | | | +--Clostridium niameyense (1) | | | | | | | | | | | +--Clostridium luticellarii (3) | | | | | | | | | | | +--Clostridium manihotivorum (1) | | | | | | | | | | | +--Isachenkonia alkalipeptolytica (1) | | | | | | | | | | | +--Clostridium isatidis (1) | | | | | | | | | | | +--Fonticella tunisiensis (1) | | | | | | | | | +--Syntrophomonadaceae (2) | | | | | | | | | | | +--Thermosyntropha (1) | | | | | | | | | | | | | +--Thermosyntropha lipolytica DSM 11003 (1) | | | | | | | | | | | +--Candidatus Syntrophocurvum alkaliphilum (1) | | | | | | | | | +--Peptococcaceae (4) | | | | | | | | | | | +--Desulforamulus profundi (1) | | | | | | | | | | | +--Desulfofundulus salinum (2) | | | | | | | | | | | +--Thermanaerosceptrum fracticalcis (1) | | | | | | | | | +--Oscillospiraceae (34) | | | | | | | | | +--Ruminococcus bovis (1) | | | | | | | | | +--Pseudoflavonifractor (2) | | | | | | | | | | | +--Pseudoflavonifractor sp. AF19-9AC (1) | | | | | | | | | | | +--Pseudoflavonifractor sp. An176 (1) | | | | | | | | | +--Bittarella massiliensis (ex Durand et al. 2017) (1) | | | | | | | | | +--Fumia xinanensis (1) | | | | | | | | | +--Faecalibacterium gallinarum (1) | | | | | | | | | +--Ruthenibacterium lactatiformans (1) | | | | | | | | | +--Ruminococcaceae bacterium AM28-23LB (1) | | | | | | | | | +--Anaerofilum (2) | | | | | | | | | | | +--Anaerofilum sp. An201 (2) | | | | | | | | | +--Ruminococcaceae bacterium BL-6 (1) | | | | | | | | | +--Merdimmobilis hominis (1) | | | | | | | | | +--Oscillospiraceae bacterium Marseille-Q3528 (2) | | | | | | | | | +--Lawsonibacter hominis (1) | | | | | | | | | +--Flavonifractor (4) | | | | | | | | | | | +--Flavonifractor sp. An52 (1) | | | | | | | | | | | +--Flavonifractor plautii 1_3_50AFAA (1) | | | | | | | | | | | +--Flavonifractor sp. An306 (1) | | | | | | | | | | | +--Flavonifractor sp. An135 (1) | | | | | | | | | +--Oscillibacter (1) | | | | | | | | | | | +--Oscillibacter sp. PC13 (1) | | | | | | | | | +--Anaerobacterium chartisolvens (1) | | | | | | | | | +--Ruminococcus (5) | | | | | | | | | | | +--Ruminococcus sp. OM06-36AC (1) | | | | | | | | | | | +--Ruminococcus sp. AF31-8BH (1) | | | | | | | | | | | +--Ruminococcus albus SY3 (2) | | | | | | | | | | | +--Ruminococcus sp. AM42-11 (1) | | | | | | | | | +--Ruminococcaceae bacterium FB2012 (1) | | | | | | | | | +--Ruminococcaceae bacterium AF10-16 (1) | | | | | | | | | +--Ruminococcus difficilis (1) | | | | | | | | | +--Ructibacterium gallinarum (1) | | | | | | | | | +--Lawsonibacter faecis (2) | | | | | | | | | +--Oscillospiraceae bacterium HV4-5-C5C (1) | | | | | | | | | +--Ligaoa zhengdingensis (1) | | | | | | | +--Peptostreptococcales (21) | | | | | | | | | +--Anaerovoracaceae (2) | | | | | | | | | | | +--Emergencia timonensis (1) | | | | | | | | | | | +--Aminipila luticellarii (1) | | | | | | | | | +--Thermotaleaceae (4) | | | | | | | | | | | +--Anaerosolibacter carboniphilus (2) | | | | | | | | | | | +--Marinisporobacter balticus (1) | | | | | | | | | | | +--Anaeromicrobium sediminis (1) | | | | | | | | | +--Natronincolaceae (4) | | | | | | | | | | | +--Alkaliphilus serpentinus (1) | | | | | | | | | | | +--Serpentinicella alkaliphila (1) | | | | | | | | | | | +--Alkaliphilus (2) | | | | | | | | | | | +--Alkaliphilus sp. B6464 (1) | | | | | | | | | | | +--Alkaliphilus peptidifermentans DSM 18978 (1) | | | | | | | | | +--Acidaminobacteraceae (1) | | | | | | | | | | | +--Acidaminobacter (1) | | | | | | | | | | | +--Acidaminobacter hydrogenoformans DSM 2784 (1) | | | | | | | | | +--Peptostreptococcaceae (10) | | | | | | | | | +--Peptacetobacter hominis (1) | | | | | | | | | +--Romboutsia weinsteinii (1) | | | | | | | | | +--Romboutsia ilealis (1) | | | | | | | | | +--Asaccharospora (1) | | | | | | | | | | | +--Asaccharospora irregularis DSM 2635 (1) | | | | | | | | | +--Tepidibacter (1) | | | | | | | | | | | +--Tepidibacter thalassicus DSM 15285 (1) | | | | | | | | | +--Romboutsia maritimum (1) | | | | | | | | | +--Romboutsia (3) | | | | | | | | | | | +--Romboutsia lituseburensis DSM 797 (2) | | | | | | | | | | | +--Romboutsia sp. CE17 (1) | | | | | | | | | +--Romboutsia hominis (1) | | | | | | | +--Lachnospirales (28) | | | | | | | | | +--Anaerotignaceae (1) | | | | | | | | | | | +--Anaerotignum (1) | | | | | | | | | | | +--Anaerotignum lactatifermentans DSM 14214 (1) | | | | | | | | | +--Lachnospiraceae (22) | | | | | | | | | | | +--Tyzzerella (1) | | | | | | | | | | | | | +--Tyzzerella sp. An114 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium AM48-27BH (1) | | | | | | | | | | | +--Variimorphobacter saccharofermentans (1) | | | | | | | | | | | +--Blautia liquoris (1) | | | | | | | | | | | +--Mobilisporobacter senegalensis (1) | | | | | | | | | | | +--Lachnospiraceae bacterium OF09-33XD (1) | | | | | | | | | | | +--Roseburia zhanii (1) | | | | | | | | | | | +--Cuneatibacter caecimuris (1) | | | | | | | | | | | +--Blautia faecicola (1) | | | | | | | | | | | +--Oribacterium (3) | | | | | | | | | | | | | +--Oribacterium sp. C9 (1) | | | | | | | | | | | | | +--Oribacterium sp. KHPX15 (2) | | | | | | | | | | | +--Anaerostipes (1) | | | | | | | | | | | | | +--Anaerostipes sp. 494a (1) | | | | | | | | | | | +--Zhenhengia yiwuensis (1) | | | | | | | | | | | +--Eisenbergiella massiliensis (1) | | | | | | | | | | | +--Lachnospiraceae bacterium KM106-2 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium OM04-12BH (1) | | | | | | | | | | | +--Mediterraneibacter butyricigenes (1) | | | | | | | | | | | +--Lachnotalea glycerini (1) | | | | | | | | | | | +--Anaerosacchariphilus polymeriproducens (1) | | | | | | | | | | | +--Mobilitalea sibirica (1) | | | | | | | | | | | +--Candidatus Galacturonibacter soehngenii (1) | | | | | | | | | +--Cellulosilyticaceae (1) | | | | | | | | | | | +--Holtiella tumoricola (1) | | | | | | | | | +--Vallitaleaceae (3) | | | | | | | | | | | +--Vallitalea pronyensis (1) | | | | | | | | | | | +--Vallitalea guaymasensis (1) | | | | | | | | | | | +--Petrocella atlantisensis (1) | | | | | | | | | +--Defluviitaleaceae (1) | | | | | | | | | +--Defluviitalea raffinosedens (1) | | | | | | | +--Thermoanaerobacterales (9) | | | | | | | | | +--Thermoanaerobacteraceae (9) | | | | | | | | | +--Thermoanaerobacterium (3) | | | | | | | | | | | +--Thermoanaerobacterium sp. RBIITD (3) | | | | | | | | | +--Thermodesulfitimonas autotrophica (1) | | | | | | | | | +--Calorimonas adulescens (2) | | | | | | | | | +--Thermoanaerobacteraceae bacterium SP2 (3) | | | | | | | +--Moorellales (2) | | | | | | | | | +--Moorellaceae (1) | | | | | | | | | | | +--Thermanaeromonas (1) | | | | | | | | | | | +--Thermanaeromonas sp. C210 (1) | | | | | | | | | +--Calderihabitantaceae (1) | | | | | | | | | +--Calderihabitans maritimus (1) | | | | | | | +--Halanaerobiales (2) | | | | | | | | | +--Halarsenatibacteraceae (1) | | | | | | | | | | | +--Halonatronomonas betaini (1) | | | | | | | | | +--Halanaerobiaceae (1) | | | | | | | | | +--Iocasia fonsfrigidae (1) | | | | | | | +--Koleobacterales (1) | | | | | | | +--Koleobacteraceae (1) | | | | | | | +--Koleobacter methoxysyntrophicus (1) | | | | | +--Bacilli (93) | | | | | | | +--Lactobacillales (27) | | | | | | | | | +--Carnobacteriaceae (2) | | | | | | | | | | | +--Atopobacter (1) | | | | | | | | | | | | | +--Atopobacter sp. AH10 (1) | | | | | | | | | | | +--Jeotgalibaca porci (1) | | | | | | | | | +--Streptococcaceae (2) | | | | | | | | | | | +--Lactococcus termiticola (1) | | | | | | | | | | | +--Lactococcus hircilactis (1) | | | | | | | | | +--Enterococcaceae (9) | | | | | | | | | | | +--Vagococcus humatus (1) | | | | | | | | | | | +--Vagococcus entomophilus (1) | | | | | | | | | | | +--Enterococcus alcedinis (1) | | | | | | | | | | | +--Enterococcus lacertideformus (1) | | | | | | | | | | | +--Vagococcus allomyrinae (1) | | | | | | | | | | | +--Enterococcus (3) | | | | | | | | | | | | | +--Enterococcus sp. NBRC 3427 (1) | | | | | | | | | | | | | +--Enterococcus sp. PFB1-1 (2) | | | | | | | | | | | +--Vagococcus vulneris (1) | | | | | | | | | +--Lactobacillaceae (9) | | | | | | | | | | | +--Levilactobacillus bambusae (1) | | | | | | | | | | | +--Lactobacillus xujianguonis (1) | | | | | | | | | | | +--Levilactobacillus suantsaii (2) | | | | | | | | | | | +--Lactobacillus (1) | | | | | | | | | | | | | +--Lactobacillus psittaci DSM 15354 (1) | | | | | | | | | | | +--Philodulcilactobacillus myokoensis (1) | | | | | | | | | | | +--Lactiplantibacillus mudanjiangensis (1) | | | | | | | | | | | +--Bombilactobacillus apium (1) | | | | | | | | | | | +--Ligilactobacillus ubinensis (1) | | | | | | | | | +--Aerococcaceae (5) | | | | | | | | | +--Ruoffia halotolerans (1) | | | | | | | | | +--Suicoccus acidiformans (1) | | | | | | | | | +--Fundicoccus ignavus (1) | | | | | | | | | +--Aerococcus (2) | | | | | | | | | +--Aerococcus sp. YH-aer222 (1) | | | | | | | | | +--Aerococcus sp. HMSC10H05 (1) | | | | | | | +--Bacillales (66) | | | | | | | +--Planococcaceae (1) | | | | | | | | | +--Paenisporosarcina cavernae (1) | | | | | | | +--Alicyclobacillaceae (19) | | | | | | | | | +--Alicyclobacillaceae bacterium I2511 (2) | | | | | | | | | +--Effusibacillus dendaii (1) | | | | | | | | | +--Alicyclobacillus (2) | | | | | | | | | | | +--Alicyclobacillus sp. SO9 (2) | | | | | | | | | +--Alicyclobacillus mengziensis (10) | | | | | | | | | +--Kyrpidia spormannii (1) | | | | | | | | | +--Alicyclobacillaceae bacterium (3) | | | | | | | +--Bacillaceae (11) | | | | | | | | | +--Neobacillus cucumis (1) | | | | | | | | | +--Tepidibacillus fermentans (1) | | | | | | | | | +--Bacillus (2) | | | | | | | | | | | +--Bacillus sp. J14TS2 (1) | | | | | | | | | | | +--Bacillus sp. FJAT-49736 (1) | | | | | | | | | +--Salicibibacter halophilus (1) | | | | | | | | | +--Pseudalkalibacillus caeni (1) | | | | | | | | | +--Caldibacillus (1) | | | | | | | | | | | +--Caldibacillus debilis GB1 (1) | | | | | | | | | +--Terrilactibacillus tamarindi (1) | | | | | | | | | +--Marinococcus luteus (1) | | | | | | | | | +--Tepidibacillus (1) | | | | | | | | | | | +--Tepidibacillus sp. HK-1 (1) | | | | | | | | | +--Weizmannia acidilactici (1) | | | | | | | +--Paenibacillaceae (31) | | | | | | | | | +--Paenibacillus arenilitoris (1) | | | | | | | | | +--Cohnella fermenti (1) | | | | | | | | | +--Paenibacillus dendrobii (1) | | | | | | | | | +--Paenibacillus lycopersici (1) | | | | | | | | | +--Paenibacillus baekrokdamisoli (1) | | | | | | | | | +--Paenibacillus protaetiae (2) | | | | | | | | | +--Paenibacillus thalictri (2) | | | | | | | | | +--Paenibacillus montanisoli (1) | | | | | | | | | +--Fontibacillus phaseoli (1) | | | | | | | | | +--Paenibacillus athensensis (1) | | | | | | | | | +--Paenibacillus albilobatus (1) | | | | | | | | | +--Paenibacillus lentus (1) | | | | | | | | | +--Paenibacillus solani (1) | | | | | | | | | +--Cohnella zeiphila (1) | | | | | | | | | +--Cohnella nanjingensis (1) | | | | | | | | | +--Paenibacillus agri (1) | | | | | | | | | +--Paenibacillus (4) | | | | | | | | | | | +--Paenibacillus sp. YN15 (1) | | | | | | | | | | | +--Paenibacillus sp. OAS669 (1) | | | | | | | | | | | +--Paenibacillus sp. NFR01 (1) | | | | | | | | | | | +--Paenibacillus sp. KS1 (1) | | | | | | | | | +--Cohnella (1) | | | | | | | | | | | +--Cohnella sp. CIP 111063 (1) | | | | | | | | | +--Paenibacillus lutimineralis (1) | | | | | | | | | +--Paenibacillus monticola (1) | | | | | | | | | +--Cohnella lubricantis (1) | | | | | | | | | +--Paenibacillus solanacearum (1) | | | | | | | | | +--Paenibacillus whitsoniae (1) | | | | | | | | | +--Paenibacillus sambharensis (1) | | | | | | | | | +--Paenibacillus nasutitermitis (1) | | | | | | | | | +--Insulibacter thermoxylanivorax (1) | | | | | | | +--Sporolactobacillaceae (1) | | | | | | | | | +--Sporolactobacillus shoreae (1) | | | | | | | +--Listeriaceae (1) | | | | | | | | | +--Listeria kieliensis (1) | | | | | | | +--Thermoactinomycetaceae (2) | | | | | | | +--Thermoactinomyces mirandus (1) | | | | | | | +--Thermoactinomyces daqus (1) | | | | | +--Negativicutes (17) | | | | | | | +--Selenomonadales (11) | | | | | | | | | +--Sporomusaceae (11) | | | | | | | | | +--Sporomusaceae bacterium (3) | | | | | | | | | +--Methylomusa anaerophila (5) | | | | | | | | | +--Pelosinus (1) | | | | | | | | | | | +--Pelosinus fermentans JBW45 (1) | | | | | | | | | +--Sporomusa (2) | | | | | | | | | +--Sporomusa acidovorans DSM 3132 (2) | | | | | | | +--Veillonellales (6) | | | | | | | +--Veillonellaceae (6) | | | | | | | +--Lucifera butyrica (6) | | | | | +--Firmicutes bacterium AF36-19BH (1) | | | | | +--Firmicutes bacterium AF22-6AC (1) | | | | | +--Tissierellia (6) | | | | | | | +--Tissierellales (4) | | | | | | | | | +--Tissierellaceae (2) | | | | | | | | | | | +--Paratissierella segnis (1) | | | | | | | | | | | +--Tissierella (1) | | | | | | | | | | | +--Tissierella sp. P1 (1) | | | | | | | | | +--Peptoniphilaceae (1) | | | | | | | | | | | +--Anaerococcus nagyae (1) | | | | | | | | | +--Sporanaerobacteraceae (1) | | | | | | | | | +--Anaerosalibacter massiliensis (1) | | | | | | | +--Tissierelliaincertaesedis (2) | | | | | | | +--Sedimentibacter (2) | | | | | | | +--Sedimentibacter hydroxybenzoicus DSM 7310 (1) | | | | | | | +--Sedimentibacter sp. zth1 (1) | | | | | +--Culicoidibacteria (1) | | | | | | | +--Culicoidibacterales (1) | | | | | | | +--Culicoidibacteraceae (1) | | | | | | | +--Culicoidibacter larvae (1) | | | | | +--Erysipelotrichia (10) | | | | | +--Erysipelotrichia bacterium (1) | | | | | +--Erysipelotrichales (9) | | | | | +--Erysipelotrichaceae (8) | | | | | | | +--Erysipelothrix (3) | | | | | | | | | +--Erysipelothrix sp. HDW6C (1) | | | | | | | | | +--Erysipelothrix sp. HDW6A (1) | | | | | | | | | +--Erysipelothrix sp. HDW6B (1) | | | | | | | +--Erysipelotrichaceae bacterium RD49 (1) | | | | | | | +--Amedibacterium intestinale (1) | | | | | | | +--Absicoccus porci (1) | | | | | | | +--Intestinibaculum porci (1) | | | | | | | +--Copranaerobaculum intestinale (1) | | | | | +--Coprobacillaceae (1) | | | | | +--Thomasclavelia (1) | | | | | +--Erysipelatoclostridium sp. An173 (1) | | | +--FCBgroup (209) | | | | | +--Bacteroidetes/Chlorobigroup (57) | | | | | | | +--Bacteroidetes (57) | | | | | | | +--Chitinophagia (10) | | | | | | | | | +--Chitinophagales (10) | | | | | | | | | +--Chitinophagaceae (10) | | | | | | | | | +--Niastella vici (4) | | | | | | | | | +--Arachidicoccus sp. BS20 (2) | | | | | | | | | +--Niabella (1) | | | | | | | | | | | +--Niabella soli DSM 19437 (1) | | | | | | | | | +--Flavisolibacter sp. LCS9 (1) | | | | | | | | | +--Niabella ginsenosidivorans (1) | | | | | | | | | +--Chitinophaga jiangningensis (1) | | | | | | | +--Sphingobacteriia (12) | | | | | | | | | +--Sphingobacteriales (12) | | | | | | | | | +--Sphingobacteriaceae (12) | | | | | | | | | +--Pedobacter sp. PACM 27299 (1) | | | | | | | | | +--Pedobacter sp. BMA (1) | | | | | | | | | +--Mucilaginibacter pedocola (2) | | | | | | | | | +--Mucilaginibacter polytrichastri (1) | | | | | | | | | +--Pedobacter sp. Hv1 (1) | | | | | | | | | +--Mucilaginibacter sp. PPCGB 2223 (1) | | | | | | | | | +--Pedobacter sp. Leaf194 (2) | | | | | | | | | +--Sphingobacterium deserti (1) | | | | | | | | | +--Pedobacter sp. CCM 8644 (1) | | | | | | | | | +--Sphingobacterium sp. ML3W (1) | | | | | | | +--Bacteroidia (7) | | | | | | | | | +--Bacteroidales (6) | | | | | | | | | | | +--Rikenellaceae (1) | | | | | | | | | | | | | +--Alistipes sp. An31A (1) | | | | | | | | | | | +--Lentimicrobiaceae (1) | | | | | | | | | | | | | +--Lentimicrobium saccharophilum (1) | | | | | | | | | | | +--Bacteroidaceae (4) | | | | | | | | | | | +--Bacteroides luti (1) | | | | | | | | | | | +--Bacteroides (3) | | | | | | | | | | | +--Bacteroides sp. CAG:714 (1) | | | | | | | | | | | +--Bacteroides plebeius CAG:211 (1) | | | | | | | | | | | +--Bacteroides graminisolvens DSM 19988 = JCM 15093 (1) | | | | | | | | | +--Marinilabiliales (1) | | | | | | | | | +--Prolixibacteraceae (1) | | | | | | | | | +--Mariniphaga anaerophila (1) | | | | | | | +--Flavobacteriia (13) | | | | | | | | | +--Flavobacteriales (13) | | | | | | | | | +--Flavobacteriaceae (13) | | | | | | | | | +--Joostella (2) | | | | | | | | | | | +--Joostella marina DSM 19592 (2) | | | | | | | | | +--Sinomicrobium oceani (1) | | | | | | | | | +--Zunongwangia (1) | | | | | | | | | | | +--Zunongwangia atlantica 22II14-10F7 (1) | | | | | | | | | +--Moheibacter sediminis (1) | | | | | | | | | +--Flavobacterium (4) | | | | | | | | | | | +--Flavobacterium rivuli WB 3.3-2 = DSM 21788 (1) | | | | | | | | | | | +--Flavobacterium beibuense F44-8 (1) | | | | | | | | | | | +--Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 (1) | | | | | | | | | | | +--Flavobacterium indicum GPTSA100-9 = DSM 17447 (1) | | | | | | | | | +--Gillisia sp. Hel1_33_143 (1) | | | | | | | | | +--Flavobacterium akiainvivens (1) | | | | | | | | | +--Chryseobacterium (1) | | | | | | | | | | | +--Chryseobacterium sp. P1-3 (1) | | | | | | | | | +--Flavobacterium sp. 316 (1) | | | | | | | +--Cytophagia (15) | | | | | | | +--Cytophagales (15) | | | | | | | +--Cytophagaceae (1) | | | | | | | | | +--Rhodonellum (1) | | | | | | | | | +--Rhodonellum psychrophilum GCM71 = DSM 17998 (1) | | | | | | | +--Cyclobacteriaceae (6) | | | | | | | | | +--Echinicola (1) | | | | | | | | | | | +--Echinicola vietnamensis DSM 17526 (1) | | | | | | | | | +--Nitritalea (1) | | | | | | | | | | | +--Nitritalea halalkaliphila LW7 (1) | | | | | | | | | +--Indibacter (1) | | | | | | | | | | | +--Indibacter alkaliphilus LW1 (1) | | | | | | | | | +--Belliella (1) | | | | | | | | | | | +--Belliella baltica DSM 15883 (1) | | | | | | | | | +--Lunatimonas lonarensis (1) | | | | | | | | | +--Cecembia (1) | | | | | | | | | +--Cecembia lonarensis LW9 (1) | | | | | | | +--Hymenobacteraceae (6) | | | | | | | | | +--Hymenobacter sp. PAMC 26628 (1) | | | | | | | | | +--Pontibacter ummariensis (1) | | | | | | | | | +--Rufibacter sp. DG31D (1) | | | | | | | | | +--Hymenobacter (1) | | | | | | | | | | | +--Hymenobacter daecheongensis DSM 21074 (1) | | | | | | | | | +--Hymenobacter sp. DG25B (1) | | | | | | | | | +--Hymenobacter sedentarius (1) | | | | | | | +--Flammeovirgaceae (2) | | | | | | | +--Cesiribacter (1) | | | | | | | | | +--Cesiribacter andamanensis AMV16 (1) | | | | | | | +--Flammeovirgaceae bacterium 311 (1) | | | | | +--Bacteroidota/Chlorobiotagroup (149) | | | | | | | +--Balneolota (2) | | | | | | | | | +--Balneolia (2) | | | | | | | | | +--Balneolales (2) | | | | | | | | | +--Balneolaceae (2) | | | | | | | | | +--Aliifodinibius salipaludis (1) | | | | | | | | | +--Fodinibius halophilus (1) | | | | | | | +--Ignavibacteriota (2) | | | | | | | | | +--Ignavibacteria (2) | | | | | | | | | +--Ignavibacteriales (2) | | | | | | | | | +--Melioribacteraceae (2) | | | | | | | | | +--Melioribacter (2) | | | | | | | | | +--Melioribacter sp. (2) | | | | | | | +--Bacteroidota (145) | | | | | | | +--Chitinophagia (36) | | | | | | | | | +--Chitinophagales (36) | | | | | | | | | +--Chitinophagaceae (36) | | | | | | | | | +--Chitinophaga lutea (1) | | | | | | | | | +--Parafilimonas terrae (1) | | | | | | | | | +--Ilyomonas limi (1) | | | | | | | | | +--Chitinophaga tropicalis (1) | | | | | | | | | +--Pseudoflavitalea (1) | | | | | | | | | | | +--Pseudoflavitalea sp. G-6-1-2 (1) | | | | | | | | | +--Chitinophaga caeni (1) | | | | | | | | | +--Rhizosphaericola mali (1) | | | | | | | | | +--Chitinophaga solisilvae (1) | | | | | | | | | +--Paraflavisolibacter caeni (1) | | | | | | | | | +--Chitinophaga parva (1) | | | | | | | | | +--Chitinophaga (2) | | | | | | | | | | | +--Chitinophaga sp. MD30 (1) | | | | | | | | | | | +--[Flexibacter] sp. ATCC 35208 (1) | | | | | | | | | +--Puia dinghuensis (1) | | | | | | | | | +--Limnovirga soli (1) | | | | | | | | | +--Deminuibacter soli (1) | | | | | | | | | +--Chitinophaga silvatica (1) | | | | | | | | | +--Taibaiella lutea (1) | | | | | | | | | +--Filimonas zeae (1) | | | | | | | | | +--Chitinophaga costaii (1) | | | | | | | | | +--Arachidicoccus soli (1) | | | | | | | | | +--Taibaiella soli (2) | | | | | | | | | +--Taibaiella chishuiensis (1) | | | | | | | | | +--Chitinophaga agri (1) | | | | | | | | | +--Chitinophaga oryziterrae (1) | | | | | | | | | +--Chitinophaga barathri (1) | | | | | | | | | +--Niabella drilacis (strain DSM 25811 / CCM 8410 / LMG 26954 / E90) (1) | | | | | | | | | +--Dinghuibacter silviterrae (1) | | | | | | | | | +--Hydrotalea sandarakina (2) | | | | | | | | | +--Thermoflavifilum thermophilum (1) | | | | | | | | | +--Terrimonas (1) | | | | | | | | | | | +--Terrimonas sp. (1) | | | | | | | | | +--Chitinophaga flava (1) | | | | | | | | | +--Sediminibacterium (1) | | | | | | | | | | | +--Sediminibacterium sp. Gen4 (1) | | | | | | | | | +--Flavipsychrobacter stenotrophus (1) | | | | | | | | | +--Pinibacter aurantiacus (1) | | | | | | | +--Sphingobacteriia (51) | | | | | | | | | +--Sphingobacteriales (51) | | | | | | | | | +--Sphingobacteriaceae (51) | | | | | | | | | +--Mucilaginibacter straminoryzae (1) | | | | | | | | | +--Parapedobacter indicus (1) | | | | | | | | | +--Mucilaginibacter segetis (1) | | | | | | | | | +--Mucilaginibacter agri (1) | | | | | | | | | +--Mucilaginibacter pallidiroseus (1) | | | | | | | | | +--Sphingobacterium corticibacter (1) | | | | | | | | | +--Pedobacter nutrimenti (1) | | | | | | | | | +--Sphingobacterium gobiense (1) | | | | | | | | | +--Mucilaginibacter ginkgonis (1) | | | | | | | | | +--Mucilaginibacter limnophilus (2) | | | | | | | | | +--Mucilaginibacter terrenus (1) | | | | | | | | | +--Pseudopedobacter (1) | | | | | | | | | | | +--Pseudopedobacter sp. (1) | | | | | | | | | +--Mucilaginibacter arboris (1) | | | | | | | | | +--Mucilaginibacter mali (1) | | | | | | | | | +--Mucilaginibacter auburnensis (1) | | | | | | | | | +--Pedobacter changchengzhani (1) | | | | | | | | | +--Mucilaginibacter robiniae (2) | | | | | | | | | +--Mucilaginibacter terrigena (1) | | | | | | | | | +--Olivibacter (2) | | | | | | | | | | | +--Olivibacter sp. LS-1 (1) | | | | | | | | | | | +--Olivibacter sp. SDN3 (1) | | | | | | | | | +--Pararcticibacter amylolyticus (1) | | | | | | | | | +--Pedobacter quisquiliarum (1) | | | | | | | | | +--Mucilaginibacter pineti (1) | | | | | | | | | +--Sphingobacterium (3) | | | | | | | | | | | +--Sphingobacterium sp. SGL-16 (1) | | | | | | | | | | | +--Sphingobacterium sp. SGG-5 (1) | | | | | | | | | | | +--Sphingobacterium sp. HMSC13C05 (1) | | | | | | | | | +--Mucilaginibacter glaciei (1) | | | | | | | | | +--Pedobacter (7) | | | | | | | | | | | +--Pedobacter sp. Leaf176 (1) | | | | | | | | | | | +--Pedobacter sp. Leaf216 (2) | | | | | | | | | | | +--Pedobacter sp. MC2016-24 (1) | | | | | | | | | | | +--Pedobacter sp. BS3 (1) | | | | | | | | | | | +--Pedobacter sp. HMWF019 (1) | | | | | | | | | | | +--Pedobacter sp. (1) | | | | | | | | | +--Hufsiella arboris (1) | | | | | | | | | +--Mucilaginibacter aquatilis (2) | | | | | | | | | +--Pedobacter chitinilyticus (1) | | | | | | | | | +--Mucilaginibacter galii (1) | | | | | | | | | +--Mucilaginibacter corticis (1) | | | | | | | | | +--Mucilaginibacter xinganensis (1) | | | | | | | | | +--Mucilaginibacter (5) | | | | | | | | | | | +--Mucilaginibacter sp. SP1R1 (1) | | | | | | | | | | | +--Mucilaginibacter sp. JRF (1) | | | | | | | | | | | +--Mucilaginibacter sp. E4BP6 (1) | | | | | | | | | | | +--Mucilaginibacter sp. FT3.2 (1) | | | | | | | | | | | +--Mucilaginibacter sp. MD40 (1) | | | | | | | | | +--Mucilaginibacter gilvus (1) | | | | | | | | | +--Pedobacter cryotolerans (1) | | | | | | | | | +--Pedobacter cryophilus (1) | | | | | | | +--Bacteroidia (13) | | | | | | | | | +--Bacteroidales (10) | | | | | | | | | | | +--Dysgonomonadaceae (2) | | | | | | | | | | | | | +--Dysgonomonas (2) | | | | | | | | | | | | | +--Dysgonomonas sp. HDW5A (1) | | | | | | | | | | | | | +--Dysgonomonas sp. PF1-16 (1) | | | | | | | | | | | +--Rikenellaceae (2) | | | | | | | | | | | | | +--Alistipes (1) | | | | | | | | | | | | | | | +--Alistipes sp. AF17-16 (1) | | | | | | | | | | | | | +--Alistipes communis (1) | | | | | | | | | | | +--Bacteroidaceae (3) | | | | | | | | | | | | | +--Phocaeicola (1) | | | | | | | | | | | | | | | +--Phocaeicola coprocola CAG:162 (1) | | | | | | | | | | | | | +--Caecibacteroides pullorum (1) | | | | | | | | | | | | | +--Bacteroidaceae bacterium HV4-6-C5C (1) | | | | | | | | | | | +--Tannerellaceae (1) | | | | | | | | | | | | | +--Parabacteroides (1) | | | | | | | | | | | | | +--Parabacteroides sp. PFB2-22 (1) | | | | | | | | | | | +--Barnesiellaceae (1) | | | | | | | | | | | | | +--Barnesiella (1) | | | | | | | | | | | | | +--Barnesiella sp. An55 (1) | | | | | | | | | | | +--Odoribacteraceae (1) | | | | | | | | | | | +--Butyricimonas (1) | | | | | | | | | | | +--Butyricimonas sp. An62 (1) | | | | | | | | | +--Marinilabiliales (3) | | | | | | | | | +--Prolixibacteraceae (1) | | | | | | | | | | | +--Prolixibacter (1) | | | | | | | | | | | +--Prolixibacter sp. SD074 (1) | | | | | | | | | +--Marinifilaceae (2) | | | | | | | | | +--Ancylomarina salipaludis (1) | | | | | | | | | +--Marinifilum (1) | | | | | | | | | +--Marinifilum sp. N1E240 (1) | | | | | | | +--Flavobacteriia (27) | | | | | | | | | +--Flavobacteriales (27) | | | | | | | | | +--Flavobacteriaceae (24) | | | | | | | | | | | +--Flavobacterium tibetense (1) | | | | | | | | | | | +--Aequorivita (1) | | | | | | | | | | | | | +--Aequorivita sp. CIP111184 (1) | | | | | | | | | | | +--Flavobacterium (3) | | | | | | | | | | | | | +--Flavobacterium sp. AG291 (1) | | | | | | | | | | | | | +--Flavobacterium sp. Sd200 (1) | | | | | | | | | | | | | +--Flavobacterium sp. NKUCC04_CG (1) | | | | | | | | | | | +--Paenimyroides aquimaris (1) | | | | | | | | | | | +--Flavobacterium kingsejongi (1) | | | | | | | | | | | +--Mariniflexile (1) | | | | | | | | | | | | | +--Mariniflexile sp. TRM1-10 (1) | | | | | | | | | | | +--Confluentibacter flavum (1) | | | | | | | | | | | +--Sinomicrobium (1) | | | | | | | | | | | | | +--Sinomicrobium sp. N-1-3-6 (1) | | | | | | | | | | | +--Flavobacterium silvisoli (1) | | | | | | | | | | | +--Myroides indicus (1) | | | | | | | | | | | +--Flavobacterium silvaticum (1) | | | | | | | | | | | +--Avrilella dinanensis (1) | | | | | | | | | | | +--Sinomicrobium weinanense (1) | | | | | | | | | | | +--Pustulibacterium marinum (1) | | | | | | | | | | | +--Myroides guanonis (1) | | | | | | | | | | | +--Paenimyroides tangerinum (1) | | | | | | | | | | | +--Flavobacterium humi (1) | | | | | | | | | | | +--Flavobacterium supellecticarium (1) | | | | | | | | | | | +--Neptunitalea chrysea (1) | | | | | | | | | | | +--Psychroflexus salis (1) | | | | | | | | | | | +--Psychroflexus maritimus (1) | | | | | | | | | | | +--Flavobacterium cerinum (1) | | | | | | | | | +--Weeksellaceae (3) | | | | | | | | | +--Chryseobacteriumgroup (3) | | | | | | | | | +--Chryseobacterium (2) | | | | | | | | | | | +--Chryseobacterium sp. RU37D (1) | | | | | | | | | | | +--Chryseobacterium sp. 3008163 (1) | | | | | | | | | +--Chryseobacterium aquaeductus (1) | | | | | | | +--Cytophagia (18) | | | | | | | +--Cytophagales (18) | | | | | | | +--Cytophagaceae (2) | | | | | | | | | +--Arundinibacter roseus (1) | | | | | | | | | +--Rhabdobacter roseus (1) | | | | | | | +--Hymenobacteraceae (12) | | | | | | | | | +--Hymenobacter taeanensis (1) | | | | | | | | | +--Pontibacter cellulosilyticus (1) | | | | | | | | | +--Pontibacter qinzhouensis (1) | | | | | | | | | +--Hymenobacter ginkgonis (2) | | | | | | | | | +--Hymenobacter (1) | | | | | | | | | | | +--Hymenobacter sp. 5317J-9 (1) | | | | | | | | | +--Pontibacter (3) | | | | | | | | | | | +--Pontibacter sp. SGAir0037 (1) | | | | | | | | | | | +--Pontibacter sp. 172403-2 (2) | | | | | | | | | +--Hymenobacter lutimineralis (1) | | | | | | | | | +--Pontibacter diazotrophicus (1) | | | | | | | | | +--Adhaeribacter pallidiroseus (1) | | | | | | | +--Spirosomataceae (4) | | | | | | | +--Dyadobacter sediminis (1) | | | | | | | +--Dyadobacter psychrotolerans (1) | | | | | | | +--Dyadobacter (1) | | | | | | | | | +--Dyadobacter sp. CECT 9275 (1) | | | | | | | +--Emticicia (1) | | | | | | | +--Emticicia sp. TH156 (1) | | | | | +--Gemmatimonadota (3) | | | | | +--Gemmatimonadetes (3) | | | | | +--Gemmatimonadales (3) | | | | | +--Gemmatimonadaceae (3) | | | | | +--Gemmatimonas (3) | | | | | +--Gemmatimonas sp. (3) | | | +--bacterium HR17 (1) | | | +--Bacteroidetes (67) | | | | | +--Sphingobacteriia (35) | | | | | | | +--Sphingobacteriales (35) | | | | | | | +--Sphingobacteriaceae (21) | | | | | | | | | +--Sphingobacterium spiritivorum ATCC 33861 (1) | | | | | | | | | +--Sphingobacterium sp. LQY-18 (1) | | | | | | | | | +--Mucilaginibacter gracilis (1) | | | | | | | | | +--Mucilaginibacter sp. HMD1056 (1) | | | | | | | | | +--Pedobacter cryoconitis (1) | | | | | | | | | +--Sphingoterrabacterium koreensis (1) | | | | | | | | | +--Pedobacter hartonius (1) | | | | | | | | | +--Mucilaginibacter sp. MP1X4 (1) | | | | | | | | | +--Pedobacter sp. BZ42 (1) | | | | | | | | | +--Pedobacter saltans DSM 12145 (1) | | | | | | | | | +--Pedobacter duraquae (2) | | | | | | | | | +--Pedobacter rhizospharae (1) | | | | | | | | | +--Mucilaginibacter sp. FT2.2 (1) | | | | | | | | | +--Pedobacter sp. TF5-37.2-LB10 (1) | | | | | | | | | +--Mucilaginibacter oryzae (1) | | | | | | | | | +--Sphingobacterium sp. MOL-1 (1) | | | | | | | | | +--Pedobacter sp. BAL39 (2) | | | | | | | | | +--Mucilaginibacter paludis DSM 18603 (1) | | | | | | | | | +--Sphingobacterium thalpophilum (1) | | | | | | | +--Sphingobacteriaceae bacterium Gsoil 809 (1) | | | | | | | +--Chitinophagaceae (13) | | | | | | | +--Solibius ginsengiterrae (1) | | | | | | | +--Chitinophaga japonensis (1) | | | | | | | +--Chitinophaga niabensis (1) | | | | | | | +--Chitinophaga sp. CS5-B1 (1) | | | | | | | +--Niastella populi (1) | | | | | | | +--Niastella yeongjuensis (1) | | | | | | | +--Chitinophaga niastensis (1) | | | | | | | +--Filimonas lacunae (1) | | | | | | | +--Chitinophaga skermanii (1) | | | | | | | +--Chitinophaga sp. R156-2 (1) | | | | | | | +--Niastella sp. Gsoil 221 (1) | | | | | | | +--Chitinophaga ginsengisegetis (1) | | | | | | | +--Flavisolibacter sp. Vu-144 (1) | | | | | +--Bacteroidia (11) | | | | | | | +--Bacteroidales (11) | | | | | | | +--Rikenellaceae (1) | | | | | | | | | +--Alistipes indistinctus YIT 12060 (1) | | | | | | | +--Marinilabiaceae (1) | | | | | | | | | +--Anaerophaga sp. HS1 (1) | | | | | | | +--Porphyromonadaceae (3) | | | | | | | | | +--Dysgonomonas mossii DSM 22836 (1) | | | | | | | | | +--Parabacteroides sp. NS31-3 (1) | | | | | | | | | +--Dysgonomonas hofstadii (1) | | | | | | | +--Bacteroidaceae (6) | | | | | | | +--Bacteroides thetaiotaomicron VPI-5482 (1) | | | | | | | +--Bacteroides coprosuis DSM 18011 (1) | | | | | | | +--Bacteroides xylanolyticus (1) | | | | | | | +--Anaerorhabdus furcosa (1) | | | | | | | +--Bacteroides coagulans (1) | | | | | | | +--Acetomicrobium faecale (1) | | | | | +--Flavobacteriia (13) | | | | | | | +--Flavobacteriales (13) | | | | | | | +--Flavobacteriaceae (13) | | | | | | | +--Polaribacter sp. K17-16 (1) | | | | | | | +--Elizabethkingia meningoseptica (1) | | | | | | | +--Mariniflexile fucanivorans (1) | | | | | | | +--Bizionia argentinensis JUB59 (1) | | | | | | | +--Arenibacter sp. NH36A (1) | | | | | | | +--Myroides sp. MY15 (1) | | | | | | | +--Flavobacterium sp. K1 (1) | | | | | | | +--Chryseobacterium sp. RHA2-9 (1) | | | | | | | +--Chryseobacterium sp. CTM (1) | | | | | | | +--Leeuwenhoekiella blandensis MED217 (1) | | | | | | | +--Myroides sp. JS-08 (1) | | | | | | | +--Myroides odoratus (1) | | | | | | | +--Sediminicola luteus (1) | | | | | +--Cytophagia (8) | | | | | +--Cytophagales (8) | | | | | +--Cyclobacteriaceae (2) | | | | | | | +--Cyclobacteriaceae bacterium MIM18 (1) | | | | | | | +--Cyclobacterium lianum (1) | | | | | +--Cytophagaceae (4) | | | | | | | +--Pontibacter akesuensis (1) | | | | | | | +--Siphonobacter aquaeclarae (1) | | | | | | | +--Dyadobacter koreensis (1) | | | | | | | +--Arcicella sp. E92 (1) | | | | | +--Cytophagaceae bacterium ANESC-S (1) | | | | | +--Flammeovirgaceae (1) | | | | | +--Sediminitomix flava (1) | | | +--Spirochaetota (1) | | | | | +--Spirochaetia (1) | | | | | +--Spirochaetales (1) | | | | | +--Sphaerochaetaceae (1) | | | | | +--Sphaerochaeta halotolerans (1) | | | +--bacterium HR28 (2) | | | +--bacterium HR12 (1) | | | +--Fusobacteriota (6) | | | | | +--Fusobacteriia (6) | | | | | +--Fusobacteriales (6) | | | | | +--Fusobacteriaceae (6) | | | | | +--Fusobacterium hominis (1) | | | | | +--Cetobacterium (1) | | | | | | | +--Cetobacterium sp. 2A (1) | | | | | +--Propionigenium (2) | | | | | | | +--Propionigenium maris DSM 9537 (2) | | | | | +--Psychrilyobacter (1) | | | | | | | +--Psychrilyobacter sp. S5 (1) | | | | | +--Fusobacterium (1) | | | | | +--Fusobacterium sp. FSA-380-WT-3A (1) | | | +--Pseudomonadota (288) | | | | | +--Acidithiobacillia (2) | | | | | | | +--Acidithiobacillales (2) | | | | | | | +--Acidithiobacillaceae (2) | | | | | | | +--Acidithiobacillus sulfuriphilus (1) | | | | | | | +--Acidithiobacillus ferrianus (1) | | | | | +--Alphaproteobacteria (112) | | | | | | | +--Hyphomicrobiales (49) | | | | | | | | | +--Methylocystaceae (1) | | | | | | | | | | | +--Methylopila turkensis (1) | | | | | | | | | +--Boseaceae (1) | | | | | | | | | | | +--Bosea spartocytisi (1) | | | | | | | | | +--Devosiaceae (1) | | | | | | | | | | | +--Youhaiella tibetensis (1) | | | | | | | | | +--Phyllobacteriaceae (5) | | | | | | | | | | | +--Pseudaminobacter arsenicus (1) | | | | | | | | | | | +--Mesorhizobium (2) | | | | | | | | | | | | | +--Mesorhizobium sp. (1) | | | | | | | | | | | | | +--Mesorhizobium sp. Root172 (1) | | | | | | | | | | | +--Aquibium carbonis (1) | | | | | | | | | | | +--Mesorhizobium waimense (1) | | | | | | | | | +--Nitrobacteraceae (5) | | | | | | | | | | | +--Tardiphaga (1) | | | | | | | | | | | | | +--Tardiphaga sp. (1) | | | | | | | | | | | +--Candidatus Afipia apatlaquensis (2) | | | | | | | | | | | +--Bradyrhizobium ivorense (1) | | | | | | | | | | | +--Bradyrhizobium (1) | | | | | | | | | | | +--Bradyrhizobium sp. Leo170 (1) | | | | | | | | | +--Kaistiaceae (2) | | | | | | | | | | | +--Kaistia (1) | | | | | | | | | | | | | +--Kaistia sp. 32K (1) | | | | | | | | | | | +--Kaistia hirudinis (1) | | | | | | | | | +--Rhizobiaceae (12) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (8) | | | | | | | | | | | | | +--Rhizobium (6) | | | | | | | | | | | | | | | +--Rhizobium sp. JAB6 (1) | | | | | | | | | | | | | | | +--Rhizobium sp. BK275 (1) | | | | | | | | | | | | | | | +--Rhizobium sp. AC44/96 (1) | | | | | | | | | | | | | | | +--Rhizobium sp. P32RR-XVIII (1) | | | | | | | | | | | | | | | +--Rhizobium sp. BG4 (1) | | | | | | | | | | | | | | | +--Rhizobium sp. BK376 (1) | | | | | | | | | | | | | +--Rhizobium straminoryzae (1) | | | | | | | | | | | | | +--Rhizobium deserti (1) | | | | | | | | | | | +--Sinorhizobium/Ensifergroup (3) | | | | | | | | | | | | | +--Ensifer (2) | | | | | | | | | | | | | | | +--Ensifer sp. M14 (2) | | | | | | | | | | | | | +--Sinorhizobium (1) | | | | | | | | | | | | | +--Sinorhizobium sp. BG8 (1) | | | | | | | | | | | +--Mycoplana azooxidifex (1) | | | | | | | | | +--Lichenibacteriaceae (4) | | | | | | | | | | | +--Lichenibacterium minor (4) | | | | | | | | | +--Hyphomicrobialesincertaesedis (1) | | | | | | | | | | | +--Vineibacter terrae (1) | | | | | | | | | +--Aurantimonadaceae (6) | | | | | | | | | | | +--Aureimonas endophytica (3) | | | | | | | | | | | +--Aureimonas jatrophae (2) | | | | | | | | | | | +--Aureimonas leprariae (1) | | | | | | | | | +--Parvibaculaceae (1) | | | | | | | | | | | +--Parvibaculaceae bacterium (1) | | | | | | | | | +--Hyphomicrobiaceae (1) | | | | | | | | | | | +--Rhodoplanes (1) | | | | | | | | | | | +--Rhodoplanes sp. (1) | | | | | | | | | +--Xanthobacteraceae (2) | | | | | | | | | | | +--Ancylobacter pratisalsi (1) | | | | | | | | | | | +--Starkeya (1) | | | | | | | | | | | +--Starkeya sp. ORNL1 (1) | | | | | | | | | +--Methylobacteriaceae (4) | | | | | | | | | | | +--Methylobacterium (3) | | | | | | | | | | | | | +--Methylobacterium sp. GXS13 (1) | | | | | | | | | | | | | +--Methylobacterium sp. BTF04 (2) | | | | | | | | | | | +--Methylobacterium symbioticum (1) | | | | | | | | | +--Chelatococcaceae (1) | | | | | | | | | | | +--Chelatococcus reniformis (1) | | | | | | | | | +--Beijerinckiaceae (2) | | | | | | | | | +--Beijerinckia (1) | | | | | | | | | | | +--Beijerinckia sp. 28-YEA-48 (1) | | | | | | | | | +--Methylocapsa palsarum (1) | | | | | | | +--Caulobacterales (2) | | | | | | | | | +--Caulobacteraceae (2) | | | | | | | | | +--Caulobacter (1) | | | | | | | | | | | +--Caulobacter sp. S6 (1) | | | | | | | | | +--Brevundimonas goettingensis (1) | | | | | | | +--Rhodospirillales (27) | | | | | | | | | +--Acetobacteraceae (21) | | | | | | | | | | | +--Gluconacetobacter takamatsuzukensis (1) | | | | | | | | | | | +--Acetobacter (2) | | | | | | | | | | | | | +--Acetobacter nitrogenifigens DSM 23921 = NBRC 105050 (1) | | | | | | | | | | | | | +--Acetobacter sp. DsW_54 (1) | | | | | | | | | | | +--Lichenicola cladoniae (2) | | | | | | | | | | | +--Acetobacter vaccinii (1) | | | | | | | | | | | +--Oecophyllibacter saccharovorans (1) | | | | | | | | | | | +--Novacetimonas maltaceti (1) | | | | | | | | | | | +--Brytella acorum (1) | | | | | | | | | | | +--Entomobacter blattae (1) | | | | | | | | | | | +--Saccharibacter (1) | | | | | | | | | | | | | +--Saccharibacter sp. 17.LH.SD (1) | | | | | | | | | | | +--Neoroseomonas alkaliterrae (1) | | | | | | | | | | | +--Lichenicoccus roseus (1) | | | | | | | | | | | +--Commensalibacter papalotli (ex Servin-Garciduenas et al. 2014) (1) | | | | | | | | | | | +--Gluconobacter (1) | | | | | | | | | | | | | +--Gluconobacter sp. DsW_058 (1) | | | | | | | | | | | +--Swingsia samuiensis (1) | | | | | | | | | | | +--Roseicella frigidaeris (1) | | | | | | | | | | | +--Aristophania vespae (1) | | | | | | | | | | | +--Formicincola oecophyllae (1) | | | | | | | | | | | +--Bombella intestini (1) | | | | | | | | | | | +--Endobacter medicaginis (1) | | | | | | | | | +--Magnetovibrionaceae (2) | | | | | | | | | | | +--Varunaivibrio sulfuroxidans (2) | | | | | | | | | +--Zavarziniaceae (1) | | | | | | | | | | | +--Zavarzinia compransoris (1) | | | | | | | | | +--Azospirillaceae (1) | | | | | | | | | | | +--Nitrospirillum (1) | | | | | | | | | | | +--Nitrospirillum amazonense CBAmc (1) | | | | | | | | | +--Dongiaceae (1) | | | | | | | | | | | +--Hypericibacter adhaerens (1) | | | | | | | | | +--Rhodospirillaceae (1) | | | | | | | | | +--Magnetospirillum (1) | | | | | | | | | +--Magnetospirillum aberrantis SpK (1) | | | | | | | +--Sphingomonadales (33) | | | | | | | | | +--Sphingosinicellaceae (1) | | | | | | | | | | | +--Sandaracinobacter neustonicus (1) | | | | | | | | | +--Sphingomonadaceae (32) | | | | | | | | | +--Novosphingobium silvae (1) | | | | | | | | | +--Sphingomonas guangdongensis (1) | | | | | | | | | +--Sphingomonas metalli (2) | | | | | | | | | +--Sphingomonadaceae bacterium G21617-S1 (1) | | | | | | | | | +--Novosphingobium (2) | | | | | | | | | | | +--Novosphingobium sp. (1) | | | | | | | | | | | +--Novosphingobium sp. PhB165 (1) | | | | | | | | | +--Sphingomonas spermidinifaciens (1) | | | | | | | | | +--Sphingomonas ginkgonis (1) | | | | | | | | | +--Sphingobium (1) | | | | | | | | | | | +--Sphingobium sp. YG1 (1) | | | | | | | | | +--Sphingomonas gellani (1) | | | | | | | | | +--Sphingomonas (19) | | | | | | | | | | | +--Sphingomonas sp. CL5.1 (1) | | | | | | | | | | | +--Sphingomonas parapaucimobilis NBRC 15100 (1) | | | | | | | | | | | +--Sphingomonas sp. Leaf198 (3) | | | | | | | | | | | +--Sphingomonas sp. Leaf20 (3) | | | | | | | | | | | +--Sphingomonas sp. NBWT7 (1) | | | | | | | | | | | +--Sphingomonas sp. S-NIH.Pt15_0812 (1) | | | | | | | | | | | +--Sphingomonas sp. CFBP 8760 (1) | | | | | | | | | | | +--Sphingomonas sp. EC-HK361 (5) | | | | | | | | | | | +--Sphingomonas sp. ID1715 (2) | | | | | | | | | | | +--Sphingomonas sp. AAP5 (1) | | | | | | | | | +--Novosphingobium fluoreni (1) | | | | | | | | | +--Sphingomonas paeninsulae (1) | | | | | | | +--Rhodobacterales (1) | | | | | | | +--Paracoccaceae (1) | | | | | | | +--Paracoccus (1) | | | | | | | +--Paracoccus sp. S-4012 (1) | | | | | +--Gammaproteobacteria (61) | | | | | | | +--Enterobacterales (26) | | | | | | | | | +--Yersiniaceae (1) | | | | | | | | | | | +--Rouxiella badensis (1) | | | | | | | | | +--Pectobacteriaceae (2) | | | | | | | | | | | +--Affinibrenneria salicis (1) | | | | | | | | | | | +--Acerihabitans arboris (1) | | | | | | | | | +--Morganellaceae (1) | | | | | | | | | | | +--Providencia (1) | | | | | | | | | | | +--Providencia heimbachae ATCC 35613 (1) | | | | | | | | | +--Enterobacteriaceae (6) | | | | | | | | | | | +--Kluyvera genomosp. 3 (1) | | | | | | | | | | | +--Klebsiella/Raoultellagroup (2) | | | | | | | | | | | | | +--Klebsiella indica (2) | | | | | | | | | | | +--Enterobacteriaceaeincertaesedis (3) | | | | | | | | | | | +--ant,tsetse,mealybug,aphid,etc.endosymbionts (3) | | | | | | | | | | | +--Symbiopectobacterium (3) | | | | | | | | | | | +--Candidatus Symbiopectobacterium sp. Dall1.0 (1) | | | | | | | | | | | +--Candidatus Symbiopectobacterium sp. PLON1 (2) | | | | | | | | | +--Erwiniaceae (12) | | | | | | | | | | | +--Pantoea alhagi (1) | | | | | | | | | | | +--Izhakiella capsodis (1) | | | | | | | | | | | +--Erwinia sorbitola (1) | | | | | | | | | | | +--Erwiniaceae bacterium PD-1 (2) | | | | | | | | | | | +--Erwinia (3) | | | | | | | | | | | | | +--Erwinia sp. 198 (1) | | | | | | | | | | | | | +--Erwinia sp. OLSSP12 (2) | | | | | | | | | | | +--Pantoea (3) | | | | | | | | | | | | | +--Pantoea sp. M_5 (2) | | | | | | | | | | | | | +--Pantoea sp. Eser (1) | | | | | | | | | | | +--[Pantoea] beijingensis (1) | | | | | | | | | +--Hafniaceae (1) | | | | | | | | | | | +--Enterobacillus tribolii (1) | | | | | | | | | +--Bruguierivoracaceae (3) | | | | | | | | | +--Sodalis ligni (1) | | | | | | | | | +--Sodalis (2) | | | | | | | | | +--Sodalis-like endosymbiont of Proechinophthirus fluctus (1) | | | | | | | | | +--Sodalis-like symbiont of Bactericera trigonica (1) | | | | | | | +--Nevskiales (2) | | | | | | | | | +--Nevskiaceae (2) | | | | | | | | | +--Solimonas terrae (1) | | | | | | | | | +--Solimonas marina (1) | | | | | | | +--Acidiferrobacterales (3) | | | | | | | | | +--Acidiferrobacteraceae (3) | | | | | | | | | +--Acidiferrobacter (3) | | | | | | | | | +--Acidiferrobacter sp. SPIII_3 (3) | | | | | | | +--Alteromonadales (5) | | | | | | | | | +--Moritellaceae (1) | | | | | | | | | | | +--Moritella (1) | | | | | | | | | | | +--Moritella sp. Urea-trap-13 (1) | | | | | | | | | +--Alteromonadalesgeneraincertaesedis (1) | | | | | | | | | | | +--Motilimonas pumila (1) | | | | | | | | | +--Psychromonadaceae (3) | | | | | | | | | +--Psychromonas (3) | | | | | | | | | +--Psychromonas sp. RZ22 (1) | | | | | | | | | +--Psychromonas sp. psych-6C06 (1) | | | | | | | | | +--Psychromonas sp. Urea-02u-13 (1) | | | | | | | +--Vibrionales (6) | | | | | | | | | +--Vibrionaceae (6) | | | | | | | | | +--Vibrio toranzoniae (1) | | | | | | | | | +--Vibrio paucivorans (1) | | | | | | | | | +--Vibrio eleionomae (1) | | | | | | | | | +--Vibrio (2) | | | | | | | | | | | +--Vibrio sp. 99-8-1 (1) | | | | | | | | | | | +--Vibrio tapetis subsp. tapetis (1) | | | | | | | | | +--Paraphotobacterium marinum (1) | | | | | | | +--Gammaproteobacteriaincertaesedis (1) | | | | | | | | | +--CandidatusCompetibacteraceae (1) | | | | | | | | | +--Plasticicumulans lactativorans (1) | | | | | | | +--Xanthomonadales (8) | | | | | | | | | +--Rhodanobacteraceae (5) | | | | | | | | | | | +--Mizugakiibacter sediminis (1) | | | | | | | | | | | +--Rhodanobacter (1) | | | | | | | | | | | | | +--Rhodanobacter sp. MP7CTX1 (1) | | | | | | | | | | | +--Dyella dinghuensis (1) | | | | | | | | | | | +--Dyella (2) | | | | | | | | | | | +--Dyella sp. OK004 (1) | | | | | | | | | | | +--Dyella sp. AD56 (1) | | | | | | | | | +--Xanthomonadaceae (3) | | | | | | | | | +--Lysobacter lycopersici (1) | | | | | | | | | +--Luteimonas gilva (1) | | | | | | | | | +--Pseudoxanthomonas winnipegensis (1) | | | | | | | +--Thiotrichales (1) | | | | | | | | | +--Fastidiosibacteraceae (1) | | | | | | | | | +--Cysteiniphilum litorale (1) | | | | | | | +--Chromatiales (4) | | | | | | | | | +--Ectothiorhodospiraceae (2) | | | | | | | | | | | +--Acidihalobacter ferrooxydans (2) | | | | | | | | | +--Chromatiaceae (2) | | | | | | | | | +--Caldichromatium japonicum (1) | | | | | | | | | +--Candidatus Nitrosoglobus terrae (1) | | | | | | | +--Pseudomonadales (5) | | | | | | | +--Marinobacteraceae (1) | | | | | | | | | +--Marinobacter (1) | | | | | | | | | +--Marinobacter sp. R17 (1) | | | | | | | +--Pseudomonadaceae (4) | | | | | | | +--Halopseudomonas salegens (1) | | | | | | | +--Pseudomonas matsuisoli (1) | | | | | | | +--Pseudomonas (2) | | | | | | | +--Pseudomonas sp. 1239 (1) | | | | | | | +--Pseudomonas sp. SSM44 (1) | | | | | +--Betaproteobacteria (111) | | | | | | | +--Burkholderiales (105) | | | | | | | | | +--Burkholderialesgeneraincertaesedis (3) | | | | | | | | | | | +--Thiomonas (2) | | | | | | | | | | | | | +--Thiomonas sp. X19 (2) | | | | | | | | | | | +--Saezia sanguinis (1) | | | | | | | | | +--Alcaligenaceae (4) | | | | | | | | | | | +--Pigmentiphaga humi (1) | | | | | | | | | | | +--Pusillimonas (3) | | | | | | | | | | | +--Pusillimonas sp. ANT_WB101 (3) | | | | | | | | | +--Burkholderiaceae (79) | | | | | | | | | | | +--Trinickia dinghuensis (6) | | | | | | | | | | | +--Paraburkholderia panacisoli (1) | | | | | | | | | | | +--Paraburkholderia caffeinitolerans (7) | | | | | | | | | | | +--Paraburkholderia eburnea (5) | | | | | | | | | | | +--Paraburkholderia acidisoli (1) | | | | | | | | | | | +--Trinickia fusca (1) | | | | | | | | | | | +--Burkholderia (2) | | | | | | | | | | | | | +--Burkholderia sp. WAC0059 (2) | | | | | | | | | | | +--Paraburkholderia monticola (2) | | | | | | | | | | | +--Paraburkholderia ultramafica (1) | | | | | | | | | | | +--Paraburkholderia (36) | | | | | | | | | | | | | +--Paraburkholderia sp. LEh10 (1) | | | | | | | | | | | | | +--Paraburkholderia sp. BL10I2N1 (1) | | | | | | | | | | | | | +--Paraburkholderia sp. DHOC27 (34) | | | | | | | | | | | +--Caballeronia (3) | | | | | | | | | | | | | +--Caballeronia sp. SBC1 (3) | | | | | | | | | | | +--Paraburkholderia fynbosensis (1) | | | | | | | | | | | +--Paraburkholderia steynii (1) | | | | | | | | | | | +--Paraburkholderia saeva (6) | | | | | | | | | | | +--Cupriavidus yeoncheonensis (1) | | | | | | | | | | | +--Pararobbsia silviterrae (1) | | | | | | | | | | | +--Caballeronia concitans (1) | | | | | | | | | | | +--Chitinasiproducens palmae (1) | | | | | | | | | | | +--Paraburkholderia acidiphila (2) | | | | | | | | | +--Sphaerotilaceae (1) | | | | | | | | | | | +--Caldimonas caldifontis (1) | | | | | | | | | +--Oxalobacteraceae (8) | | | | | | | | | | | +--Undibacterium terreum (1) | | | | | | | | | | | +--Noviherbaspirillum pedocola (1) | | | | | | | | | | | +--Herbaspirillum (4) | | | | | | | | | | | | | +--Herbaspirillum sp. SJZ107 (2) | | | | | | | | | | | | | +--Herbaspirillum sp. Sphag64 (1) | | | | | | | | | | | | | +--Herbaspirillum sp. meg3 (1) | | | | | | | | | | | +--Telluriagroup (2) | | | | | | | | | | | +--Massilia forsythiae (2) | | | | | | | | | +--Comamonadaceae (10) | | | | | | | | | +--Variovorax (9) | | | | | | | | | | | +--Variovorax sp. Sphag1AA (9) | | | | | | | | | +--Rhodoferax sediminis (1) | | | | | | | +--Ferrovales (1) | | | | | | | | | +--Ferrovaceae (1) | | | | | | | | | +--Ferrovum (1) | | | | | | | | | +--Ferrovum sp. PN-J185 (1) | | | | | | | +--Rhodocyclales (1) | | | | | | | | | +--Zoogloeaceae (1) | | | | | | | | | +--Thauera (1) | | | | | | | | | +--Thauera sp. K11 (1) | | | | | | | +--Neisseriales (2) | | | | | | | | | +--Chromobacteriaceae (2) | | | | | | | | | +--Aquitalea (1) | | | | | | | | | | | +--Aquitalea sp. FJL05 (1) | | | | | | | | | +--Paludibacterium denitrificans (1) | | | | | | | +--Nitrosomonadales (2) | | | | | | | +--Methylophilaceae (1) | | | | | | | | | +--Methyloradius palustris (1) | | | | | | | +--Gallionellaceae (1) | | | | | | | +--Sideroxydans (1) | | | | | | | +--Sideroxydans sp. CL21 (1) | | | | | +--Hydrogenophilia (2) | | | | | +--Hydrogenophilaliaincertaesedis (2) | | | | | +--Pelomicrobium methylotrophicum (2) | | | +--Tenericutes (5) | | | | | +--Mollicutes (5) | | | | | +--Anaeroplasmatales (1) | | | | | | | +--Anaeroplasmataceae (1) | | | | | | | +--Anaeroplasma bactoclasticum (1) | | | | | +--Acholeplasmatales (3) | | | | | | | +--Acholeplasmataceae (3) | | | | | | | +--Acholeplasma oculi (1) | | | | | | | +--Acholeplasma hippikon (1) | | | | | | | +--Acholeplasma axanthum (1) | | | | | +--Mycoplasmataceae (1) | | | | | +--Mycoplasma anatis 1340 (1) | | | +--Thermotogae (7) | | | | | +--Thermotogales bacterium MesG1.Ag.4.2 (1) | | | | | +--Thermotogales (5) | | | | | | | +--Thermotogaceae (5) | | | | | | | +--Kosmotoga olearia TBF 19.5.1 (1) | | | | | | | +--Thermotoga thermarum DSM 5069 (2) | | | | | | | +--Geotoga petraea (1) | | | | | | | +--Thermotoga lettingae TMO (1) | | | | | +--Thermotogales bacterium OCT74 (1) | | | +--Acidobacteriota (17) | | | | | +--Vicinamibacteria (1) | | | | | | | +--Vicinamibacterales (1) | | | | | | | +--Vicinamibacteraceae (1) | | | | | | | +--Luteitalea (1) | | | | | | | +--Luteitalea sp. (1) | | | | | +--Terriglobia (14) | | | | | | | +--Terriglobales (14) | | | | | | | +--Acidobacteriaceae (14) | | | | | | | +--Edaphobacter acidisoli (1) | | | | | | | +--Silvibacterium dinghuense (1) | | | | | | | +--Edaphobacter (1) | | | | | | | | | +--Edaphobacter sp. 4G125 (1) | | | | | | | +--Granulicella sibirica (1) | | | | | | | +--Granulicella (3) | | | | | | | | | +--Granulicella sp. WH15 (1) | | | | | | | | | +--Granulicella sp. 5B5 (2) | | | | | | | +--Edaphobacter dinghuensis (2) | | | | | | | +--Acidipila (2) | | | | | | | | | +--Acidipila sp. EB88 (2) | | | | | | | +--Alloacidobacterium dinghuense (1) | | | | | | | +--Edaphobacter lichenicola (1) | | | | | | | +--Terriglobus albidus (1) | | | | | +--Acidobacteria bacterium AB60 (1) | | | | | +--Holophagae (1) | | | | | +--Thermotomaculales (1) | | | | | +--Thermotomaculaceae (1) | | | | | +--Thermotomaculum hydrothermale (1) | | | +--Acidobacteria (20) | | | | | +--unclassifiedAcidobacteria (1) | | | | | | | +--Acidobacteriasubdivision23 (1) | | | | | | | +--Thermoanaerobaculum aquaticum (1) | | | | | +--Acidobacteriia (2) | | | | | | | +--Acidobacteriales (2) | | | | | | | +--Acidobacteriaceae (2) | | | | | | | +--Granulicella (1) | | | | | | | | | +--Granulicella tundricola MP5ACTX9 (1) | | | | | | | +--Terriglobus (1) | | | | | | | +--Terriglobus roseus DSM 18391 (1) | | | | | +--Acidobacteriales (16) | | | | | | | +--Acidobacteriaceae bacterium 277 (1) | | | | | | | +--Acidobacteriaceae bacterium K22 (3) | | | | | | | +--Acidobacteriaceae (12) | | | | | | | +--Acidopila rosea (2) | | | | | | | +--Granulicella pectinivorans (1) | | | | | | | +--Edaphobacter aggregans (2) | | | | | | | +--Edaphobacter modestus (1) | | | | | | | +--Granulicella aggregans (1) | | | | | | | +--Acidobacterium sp. MP5ACTX8 (1) | | | | | | | +--Granulicella rosea (1) | | | | | | | +--Terriglobus roseus (1) | | | | | | | +--Granulicella arctica (1) | | | | | | | +--Terriglobus saanensis SP1PR4 (1) | | | | | +--Candidatus Koribacter versatilis Ellin345 (1) | | | +--PVCgroup (18) | | | | | +--Verrucomicrobiota (3) | | | | | | | +--Opitutae (1) | | | | | | | | | +--Opitutales (1) | | | | | | | | | +--Opitutaceae (1) | | | | | | | | | +--Ereboglobus luteus (1) | | | | | | | +--Spartobacteria (1) | | | | | | | | | +--Chthoniobacterales (1) | | | | | | | | | +--Chthoniobacteraceae (1) | | | | | | | | | +--CandidatusUdaeobacter (1) | | | | | | | | | +--Candidatus Udaeobacter sp. (1) | | | | | | | +--Verrucomicrobiae (1) | | | | | | | +--Verrucomicrobiales (1) | | | | | | | +--Verrucomicrobiales bacterium VVV1 (1) | | | | | +--Planctomycetota (5) | | | | | | | +--Phycisphaerae (2) | | | | | | | | | +--Phycisphaerales (2) | | | | | | | | | +--Phycisphaeraceae (1) | | | | | | | | | | | +--Poriferisphaera corsica (1) | | | | | | | | | +--Phycisphaerales bacterium (1) | | | | | | | +--Planctomycetia (2) | | | | | | | | | +--Gemmatales (1) | | | | | | | | | | | +--Gemmataceae (1) | | | | | | | | | | | +--Thermogemmata fonticola (1) | | | | | | | | | +--Pirellulales (1) | | | | | | | | | +--Thermoguttaceae (1) | | | | | | | | | +--Thermogutta terrifontis (1) | | | | | | | +--CandidatusBrocadiia (1) | | | | | | | +--CandidatusBrocadiales (1) | | | | | | | +--CandidatusBrocadiaceae (1) | | | | | | | +--Candidatus Brocadiaceae bacterium S225 (1) | | | | | +--Planctomycetes (5) | | | | | | | +--Planctomycetia (5) | | | | | | | +--CandidatusBrocadiales (2) | | | | | | | | | +--CandidatusBrocadiaceae (2) | | | | | | | | | +--CandidatusBrocadia (2) | | | | | | | | | +--Candidatus Brocadia sinica JPN1 (2) | | | | | | | +--Planctomycetales (3) | | | | | | | +--Isosphaeraceae (1) | | | | | | | | | +--Singulisphaera (1) | | | | | | | | | +--Singulisphaera acidiphila DSM 18658 (1) | | | | | | | +--Planctomycetaceae (2) | | | | | | | +--Planctomyces sp. SH-PL14 (1) | | | | | | | +--Planctomycetaceae bacterium SCGC AG-212-F19 (1) | | | | | +--Verrucomicrobia (3) | | | | | | | +--Methylacidiphilae (3) | | | | | | | +--Methylacidiphilales (3) | | | | | | | +--Methylacidiphilaceae (3) | | | | | | | +--Methylacidiphilum (3) | | | | | | | +--Methylacidiphilum fumariolicum SolV (3) | | | | | +--Lentisphaerota (2) | | | | | +--Lentisphaerota bacterium (2) | | | +--Nitrospirae (9) | | | | | +--Nitrospirales (4) | | | | | | | +--Nitrospiraceae (4) | | | | | | | +--Leptospirillum ferrodiazotrophum (1) | | | | | | | +--Candidatus Nitrospira defluvii (1) | | | | | | | +--Thermodesulfovibrio yellowstonii DSM 11347 (1) | | | | | | | +--Nitrospira moscoviensis (1) | | | | | +--Nitrospira (5) | | | | | +--Nitrospirales (5) | | | | | +--Nitrospiraceae (5) | | | | | +--Candidatus Nitrospira inopinata (1) | | | | | +--Nitrospira sp. SCGC AG-212-E16 (1) | | | | | +--Leptospirillum (2) | | | | | | | +--Leptospirillum sp. Group IV 'UBA BS' (1) | | | | | | | +--Leptospirillumsp.GroupI (1) | | | | | | | +--Leptospirillum ferrooxidans C2-3 (1) | | | | | +--Nitrospira japonica (1) | | | +--Synergistota (2) | | | | | +--Synergistia (2) | | | | | +--Synergistales (2) | | | | | +--Synergistaceae (1) | | | | | | | +--Cloacibacillus porcorum (1) | | | | | +--Aminithiophilaceae (1) | | | | | +--Aminithiophilus ramosus (1) | | | +--Aquificae (4) | | | | | +--Aquificae (1) | | | | | | | +--Aquificales (1) | | | | | | | +--Aquificalesgeneraincertaesedis (1) | | | | | | | +--Thermosulfidibacter (1) | | | | | | | +--Thermosulfidibacter takaii ABI70S6 (1) | | | | | +--Aquificales (3) | | | | | +--Aquificaceae (3) | | | | | +--Hydrogenobaculum sp. HO (3) | | | +--Actinobacteria (97) | | | | | +--Rubrobacteridae bacterium F2-223 (1) | | | | | +--Coriobacteridae (2) | | | | | | | +--Coriobacteriales (2) | | | | | | | +--Coriobacterineae (2) | | | | | | | +--Coriobacteriaceae (2) | | | | | | | +--Gordonibacter pamelaeae 7-10-1-b (1) | | | | | | | +--Olsenella sp. lac31 (1) | | | | | +--Rubrobacteridae (4) | | | | | | | +--Rubrobacterales (3) | | | | | | | | | +--Rubrobacterineae (3) | | | | | | | | | +--Rubrobacteraceae (3) | | | | | | | | | +--Rubrobacter radiotolerans (1) | | | | | | | | | +--Rubrobacter xylanophilus DSM 9941 (1) | | | | | | | | | +--Rubrobacter taiwanensis (1) | | | | | | | +--Solirubrobacterales (1) | | | | | | | +--Conexibacteraceae (1) | | | | | | | +--Conexibacter sp. KV-962 (1) | | | | | +--Actinobacteridae (90) | | | | | +--Actinomycetales (80) | | | | | | | +--Streptomycineae (9) | | | | | | | | | +--Streptomycetaceae (9) | | | | | | | | | +--Streptomyces alanosinicus (1) | | | | | | | | | +--Streptomyces flaveus (1) | | | | | | | | | +--Streptomyces rubidus (1) | | | | | | | | | +--Streptomyces malaysiensis (1) | | | | | | | | | +--Streptomyces nodosus (3) | | | | | | | | | +--Streptomyces brasiliensis (1) | | | | | | | | | +--Streptomyces alni (1) | | | | | | | +--Corynebacterineae (30) | | | | | | | | | +--Nocardiaceae (4) | | | | | | | | | | | +--Rhodococcus triatomae (1) | | | | | | | | | | | +--Nocardia farcinica IFM 10152 (1) | | | | | | | | | | | +--Nocardia speluncae (1) | | | | | | | | | | | +--Nocardia soli (1) | | | | | | | | | +--Mycobacteriaceae (24) | | | | | | | | | | | +--Mycobacterium rhodesiae NBB3 (1) | | | | | | | | | | | +--Mycobacterium botniense (3) | | | | | | | | | | | +--Mycobacterium marinum M (1) | | | | | | | | | | | +--Mycobacterium sp. JDM601 (1) | | | | | | | | | | | +--Mycobacterium franklinii (1) | | | | | | | | | | | +--Mycobacterium triviale (1) | | | | | | | | | | | +--Mycobacterium sherrisii (8) | | | | | | | | | | | +--Mycobacterium cookii (1) | | | | | | | | | | | +--Mycobacterium heidelbergense (6) | | | | | | | | | | | +--Mycobacterium brumae (1) | | | | | | | | | +--Gordoniaceae (2) | | | | | | | | | +--Gordonia bronchialis DSM 43247 (1) | | | | | | | | | +--Gordonia sp. IFM 10881 (1) | | | | | | | +--Propionibacterineae (13) | | | | | | | | | +--Nocardioidaceae (6) | | | | | | | | | | | +--Friedmanniella sagamiharensis (1) | | | | | | | | | | | +--Friedmanniella antarctica (3) | | | | | | | | | | | +--Propionicimonas paludicola (1) | | | | | | | | | | | +--Nocardioides kongjuensis (1) | | | | | | | | | +--Propionibacteriaceae (7) | | | | | | | | | +--Propionibacterium avidum ATCC 25577 (1) | | | | | | | | | +--Propionibacterium jensenii (1) | | | | | | | | | +--Microlunatus phosphovorus NM-1 (2) | | | | | | | | | +--Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 (2) | | | | | | | | | +--Propionibacterium cyclohexanicum (1) | | | | | | | +--Micrococcineae (16) | | | | | | | | | +--Micrococcaceae (2) | | | | | | | | | | | +--Arthrobacter cryotolerans (1) | | | | | | | | | | | +--Arthrobacter psychrochitiniphilus (1) | | | | | | | | | +--Microbacteriaceae (3) | | | | | | | | | | | +--Leifsonia sp. LI1 (1) | | | | | | | | | | | +--Cryobacterium psychrophilum (1) | | | | | | | | | | | +--Leifsonia xyli subsp. xyli str. CTCB07 (1) | | | | | | | | | +--Bogoriellaceae (1) | | | | | | | | | | | +--Georgenia muralis (1) | | | | | | | | | +--Dermacoccaceae (1) | | | | | | | | | | | +--Dermacoccus sp. HOR6-4 (1) | | | | | | | | | +--Beutenbergiaceae (1) | | | | | | | | | | | +--Salana multivorans (1) | | | | | | | | | +--Promicromonosporaceae (2) | | | | | | | | | | | +--Xylanibacterium ulmi (1) | | | | | | | | | | | +--Cellulosimicrobium funkei (1) | | | | | | | | | +--Intrasporangiaceae (3) | | | | | | | | | | | +--Phycicoccus sp. V2M29 (1) | | | | | | | | | | | +--Terrabacter aerolatus (1) | | | | | | | | | | | +--Intrasporangium sp. Q5-1 (1) | | | | | | | | | +--Cellulomonadaceae (2) | | | | | | | | | | | +--Cellulomonas hominis (1) | | | | | | | | | | | +--Cellulomonas composti (1) | | | | | | | | | +--Luteimicrobium subarcticum (1) | | | | | | | +--Kineosporiineae (1) | | | | | | | | | +--Kineosporiaceae (1) | | | | | | | | | +--Quadrisphaera granulorum (1) | | | | | | | +--Pseudonocardineae (6) | | | | | | | | | +--Pseudonocardiaceae (6) | | | | | | | | | +--Pseudonocardia autotrophica (1) | | | | | | | | | +--Actinomycetospora cinnamomea (1) | | | | | | | | | +--Pseudonocardia endophytica (2) | | | | | | | | | +--Pseudonocardia sp. YIM 63101 (1) | | | | | | | | | +--Pseudonocardia halophobica (1) | | | | | | | +--Micromonosporineae (1) | | | | | | | | | +--Micromonosporaceae bacterium NBRC 104875 (1) | | | | | | | +--Frankineae (3) | | | | | | | | | +--Acidothermaceae (2) | | | | | | | | | | | +--Acidothermus cellulolyticus 11B (2) | | | | | | | | | +--Geodermatophilaceae (1) | | | | | | | | | +--Geodermatophilus sp. CPCC201356 (1) | | | | | | | +--Catenulisporineae (1) | | | | | | | +--Catenulisporaceae (1) | | | | | | | +--Catenulispora acidiphila DSM 44928 (1) | | | | | +--Bifidobacteriales (10) | | | | | +--Bifidobacteriaceae (10) | | | | | +--Bifidobacterium subtile (1) | | | | | +--Bifidobacterium psychraerophilum (2) | | | | | +--Bifidobacterium sp. AFB23-3 (1) | | | | | +--Bifidobacterium scardovii (1) | | | | | +--Bifidobacterium longum NCC2705 (1) | | | | | +--Bifidobacterium saeculare (1) | | | | | +--Bifidobacterium merycicum (1) | | | | | +--Bifidobacterium breve DSM 20213 (1) | | | | | +--Bifidobacterium adolescentis ATCC 15703 (1) | | | +--Planctomycetes (4) | | | | | +--Planctomycetacia (4) | | | | | +--Planctomycetales (4) | | | | | +--planctomycete KSU-1 (1) | | | | | +--Candidatus Kuenenia stuttgartiensis (2) | | | | | +--Candidatus Brocadia sp. 40 (1) | | | +--delta/epsilonsubdivisions (1) | | | | | +--Deltaproteobacteria (1) | | | | | +--CandidatusZymogenia (1) | | | | | +--CandidatusZymogeniales (1) | | | | | +--CandidatusZymogenaceae (1) | | | | | +--Candidatus Zymogenus saltonus (1) | | | +--Chloroflexi (16) | | | | | +--Ktedonobacteria (1) | | | | | | | +--Ktedonobacterales (1) | | | | | | | +--Thermosporotrichaceae (1) | | | | | | | +--Thermosporothrix hazakensis (1) | | | | | +--Chloroflexales (1) | | | | | | | +--Chloroflexaceae (1) | | | | | | | +--Chloroflexus aurantiacus J-10-fl (1) | | | | | +--Anaerolineae (14) | | | | | +--Anaerolineales (14) | | | | | +--Anaerolineaceae (14) | | | | | +--Thermanaerothrix daxensis (3) | | | | | +--Bellilinea caldifistulae (1) | | | | | +--Anaerolinea thermolimosa (6) | | | | | +--Leptolinea tardivitalis (4) | | | +--Firmicutes (295) | | | | | +--Clostridia (178) | | | | | | | +--Thermoanaerobacterales (16) | | | | | | | | | +--Thermoanaerobacteraceae (9) | | | | | | | | | | | +--Moorellagroup (2) | | | | | | | | | | | | | +--Ammonifex degensii KC4 (1) | | | | | | | | | | | | | +--Moorella sp. 64_FGQ (1) | | | | | | | | | | | +--Thermoanaerobacter tengcongensis MB4 (3) | | | | | | | | | | | +--Carboxydothermus hydrogenoformans Z-2901 (1) | | | | | | | | | | | +--Thermoanaerobacter pseudethanolicus ATCC 33223 (2) | | | | | | | | | | | +--Fervidicola ferrireducens (1) | | | | | | | | | +--ThermoanaerobacteralesFamilyIII.IncertaeSedis (7) | | | | | | | | | +--Thermovenabulum sp. R270 (2) | | | | | | | | | +--Thermoanaerobacterium thermosaccharolyticum DSM 571 (2) | | | | | | | | | +--Caldicellulosiruptor owensensis OL (2) | | | | | | | | | +--Thermosediminibacter oceani DSM 16646 (1) | | | | | | | +--Clostridiales bacterium BV3C26 (1) | | | | | | | +--Halanaerobiales (7) | | | | | | | | | +--Halanaerobiaceae (3) | | | | | | | | | | | +--Halanaerobium hydrogeniformans (1) | | | | | | | | | | | +--Halanaerobium praevalens DSM 2228 (1) | | | | | | | | | | | +--Halarsenatibacter silvermanii (1) | | | | | | | | | +--Halobacteroidaceae (4) | | | | | | | | | +--Selenihalanaerobacter shriftii (1) | | | | | | | | | +--Acetohalobium arabaticum DSM 5501 (1) | | | | | | | | | +--Orenia marismortui (1) | | | | | | | | | +--Halanaerobacter sp. CEJFG43 (1) | | | | | | | +--Natranaerobiales (1) | | | | | | | | | +--Natranaerobiaceae (1) | | | | | | | | | +--Natranaerobius thermophilus JW/NM-WN-LF (1) | | | | | | | +--Clostridiales genomosp. BVAB3 str. UPII9-5 (1) | | | | | | | +--Clostridiales bacterium 9401234 (1) | | | | | | | +--Clostridiales (151) | | | | | | | +--Heliobacteriaceae (2) | | | | | | | | | +--Heliobacterium modesticaldum Ice1 (1) | | | | | | | | | +--Heliobacillus mobilis (1) | | | | | | | +--Clostridiaceae bacterium SN021 (1) | | | | | | | +--Lachnospiraceae bacterium 9_1_43BFAA (1) | | | | | | | +--Eubacteriaceae (10) | | | | | | | | | +--Eubacterium limosum KIST612 (1) | | | | | | | | | +--Alkalibaculum bacchi (1) | | | | | | | | | +--Eubacterium ruminantium (1) | | | | | | | | | +--Acetobacterium paludosum (2) | | | | | | | | | +--Eubacterium tarantellae (1) | | | | | | | | | +--Eubacterium ventriosum (1) | | | | | | | | | +--Acetobacterium bakii (1) | | | | | | | | | +--Eubacterium aggregans (1) | | | | | | | | | +--Eubacterium eligens ATCC 27750 (1) | | | | | | | +--Lachnospiraceae (3) | | | | | | | | | +--Clostridium lentocellum DSM 5427 (1) | | | | | | | | | +--Dorea longicatena (1) | | | | | | | | | +--Coprococcus catus (1) | | | | | | | +--ClostridialesFamilyXVIII.IncertaeSedis (3) | | | | | | | | | +--Caldinitratiruptor microaerophilus (3) | | | | | | | +--Clostridiaceae bacterium JC13 (1) | | | | | | | +--Ruminococcaceae (14) | | | | | | | | | +--Ruminococcus obeum (1) | | | | | | | | | +--Hydrogenoanaerobacterium saccharovorans (1) | | | | | | | | | +--Ruminococcus albus 8 (2) | | | | | | | | | +--Ruminococcaceae bacterium D16 (2) | | | | | | | | | +--Ethanoligenens harbinense YUAN-3 (1) | | | | | | | | | +--Ruminococcus sp. YE71 (1) | | | | | | | | | +--Bacteroides cellulosolvens ATCC 35603 (3) | | | | | | | | | +--Acetanaerobacterium elongatum (3) | | | | | | | +--Blautia luti (1) | | | | | | | +--ClostridialesFamilyXI.IncertaeSedis (8) | | | | | | | | | +--Anaerococcus lactolyticus ATCC 51172 (1) | | | | | | | | | +--Anaerococcus vaginalis ATCC 51170 (1) | | | | | | | | | +--Peptoniphilus sp. RMA 16757 (1) | | | | | | | | | +--Sedimentibacter saalensis (1) | | | | | | | | | +--Finegoldia magna ATCC 29328 (1) | | | | | | | | | +--Anaerococcus prevotii ACS-065-V-Col13 (1) | | | | | | | | | +--Peptoniphilus duerdenii ATCC BAA-1640 (1) | | | | | | | | | +--Sporanaerobacter sp. C5BEL (1) | | | | | | | +--Anaerovirgula multivorans (1) | | | | | | | +--Lachnospiraceae bacterium 3_1_57FAA_CT1 (1) | | | | | | | +--Clostridiaceae bacterium FH042 (1) | | | | | | | +--Proteiniborus ethanoligenes (1) | | | | | | | +--Clostridiaceae (75) | | | | | | | | | +--Clostridium sp. D3RC-2 (1) | | | | | | | | | +--Thermotalea metallivorans (1) | | | | | | | | | +--Clostridium ljungdahlii (1) | | | | | | | | | +--Clostridium saccharolyticum WM1 (1) | | | | | | | | | +--Clostridium pasteurianum BC1 (1) | | | | | | | | | +--Clostridium aceticum (1) | | | | | | | | | +--Clostridium thermoalcaliphilum (1) | | | | | | | | | +--Clostridium disporicum (1) | | | | | | | | | +--Clostridium sp. 232.1 (1) | | | | | | | | | +--Clostridium bolteae ATCC BAA-613 (1) | | | | | | | | | +--Clostridium perfringens str. 13 (1) | | | | | | | | | +--Clostridium cellulosi (1) | | | | | | | | | +--Clostridium sp. D5 (1) | | | | | | | | | +--Clostridium fallax (1) | | | | | | | | | +--Clostridium frigidicarnis (1) | | | | | | | | | +--Clostridium sp. 7_2_43FAA (2) | | | | | | | | | +--Clostridium uliginosum (1) | | | | | | | | | +--Clostridium phytofermentans ISDg (1) | | | | | | | | | +--Clostridium thermosuccinogenes (1) | | | | | | | | | +--Clostridium aciditolerans (1) | | | | | | | | | +--Clostridium hathewayi (1) | | | | | | | | | +--Clostridium saccharoperbutylacetonicum ATCC 27021 (1) | | | | | | | | | +--Clostridium hiranonis DSM 13275 (1) | | | | | | | | | +--Clostridium lavalense (1) | | | | | | | | | +--Clostridium cellulovorans 743B (1) | | | | | | | | | +--Clostridium sticklandii DSM 519 (1) | | | | | | | | | +--Clostridium purinilyticum (1) | | | | | | | | | +--Clostridium hathewayi WAL-18680 (1) | | | | | | | | | +--Clostridium sp. BS-1 (7) | | | | | | | | | +--Clostridium tetanomorphum (1) | | | | | | | | | +--Natronincola ferrireducens (1) | | | | | | | | | +--Clostridium sartagoforme (1) | | | | | | | | | +--Clostridium sulfidigenes (1) | | | | | | | | | +--Clostridium vincentii (1) | | | | | | | | | +--Clostridium histolyticum (1) | | | | | | | | | +--Natronincola peptidovorans (2) | | | | | | | | | +--Clostridium acetobutylicum ATCC 824 (1) | | | | | | | | | +--Clostridium kluyveri DSM 555 (1) | | | | | | | | | +--Clostridium aminobutyricum (1) | | | | | | | | | +--Clostridium chromoreductans (2) | | | | | | | | | +--Clostridium taeniosporum (1) | | | | | | | | | +--Clostridium neonatale (1) | | | | | | | | | +--Clostridium butyricum E4 str. BoNT E BL5262 (1) | | | | | | | | | +--Clostridium cadaveris (2) | | | | | | | | | +--Clostridium sp. MSTE9 (2) | | | | | | | | | +--Clostridium paraputrificum (1) | | | | | | | | | +--Clostridium polysaccharolyticum (1) | | | | | | | | | +--Caloramator australicus RC3 (1) | | | | | | | | | +--Alkaliphilus oremlandii OhILAs (1) | | | | | | | | | +--Clostridium halophilum (1) | | | | | | | | | +--Clostridium thermocellum ATCC 27405 (1) | | | | | | | | | +--Clostridium gasigenes (1) | | | | | | | | | +--Clostridium algidixylanolyticum (1) | | | | | | | | | +--Alkaliphilus metalliredigens QYMF (1) | | | | | | | | | +--Clostridium aminovalericum (1) | | | | | | | | | +--Clostridium tagluense (1) | | | | | | | | | +--Clostridium difficile (1) | | | | | | | | | +--Clostridium populeti (1) | | | | | | | | | +--Sarcina ventriculi (1) | | | | | | | | | +--Clostridium putrefaciens (1) | | | | | | | | | +--Clostridium symbiosum WAL-14163 (1) | | | | | | | | | +--Clostridium neopropionicum (1) | | | | | | | | | +--Clostridium botulinum A str. ATCC 3502 (2) | | | | | | | +--Syntrophomonadaceae (3) | | | | | | | | | +--Syntrophothermus lipocalidus DSM 12680 (2) | | | | | | | | | +--Dethiobacter alkaliphilus AHT 1 (1) | | | | | | | +--Pseudoflavonifractor capillosus ATCC 29799 (1) | | | | | | | +--Lachnospiraceae bacterium 2_1_46FAA (1) | | | | | | | +--Peptococcaceae (23) | | | | | | | +--Thermincola potens JR (2) | | | | | | | +--Desulfitobacterium (1) | | | | | | | | | +--Desulfitobacterium sp. enrichment culture clone CEB3 (1) | | | | | | | +--Desulfotomaculum carboxydivorans CO-1-SRB (1) | | | | | | | +--Pelotomaculum thermopropionicum SI (1) | | | | | | | +--Desulfitobacterium hafniense Y51 (1) | | | | | | | +--Desulfotomaculum ruminis DSM 2154 (1) | | | | | | | +--Desulfotomaculum acetoxidans DSM 771 (2) | | | | | | | +--Pelotomaculum propionicicum (8) | | | | | | | +--Desulfotomaculum thermobenzoicum (4) | | | | | | | +--Pelotomaculum schinkii (2) | | | | | +--Negativicutes (25) | | | | | | | +--Selenomonadales (25) | | | | | | | +--Veillonellaceae (25) | | | | | | | +--Negativicoccus succinicivorans (1) | | | | | | | +--Thermosinus carboxydivorans Nor1 (1) | | | | | | | +--Sporomusa malonica (3) | | | | | | | +--Megamonas hypermegale (1) | | | | | | | +--Propionispora vibrioides (10) | | | | | | | +--Megasphaera paucivorans (1) | | | | | | | +--Anaerospora hongkongensis (1) | | | | | | | +--Acetonema longum DSM 6540 (1) | | | | | | | +--Allisonella histaminiformans (1) | | | | | | | +--Sporomusa sp. An4 (1) | | | | | | | +--Pectinatus cerevisiiphilus (1) | | | | | | | +--Dendrosporobacter quercicolus (1) | | | | | | | +--Propionispira arboris (1) | | | | | | | +--Pectinatus sp. TY (1) | | | | | +--Lactobacillales (37) | | | | | | | +--Carnobacteriaceae (2) | | | | | | | | | +--Granulicatella balaenopterae (1) | | | | | | | | | +--Isobaculum melis (1) | | | | | | | +--Streptococcaceae (6) | | | | | | | | | +--Streptococcus minor (1) | | | | | | | | | +--Lactovum miscens (2) | | | | | | | | | +--Lactococcus lactis subsp. lactis Il1403 (2) | | | | | | | | | +--Streptococcus pluranimalium (1) | | | | | | | +--Enterococcaceae (13) | | | | | | | | | +--Vagococcus elongatus (1) | | | | | | | | | +--Enterococcus sp. HAMBI 3055 (1) | | | | | | | | | +--Enterococcus casseliflavus EC20 (1) | | | | | | | | | +--Enterococcus canis (2) | | | | | | | | | +--Enterococcus thailandicus (2) | | | | | | | | | +--Enterococcus faecalis V583 (1) | | | | | | | | | +--Enterococcus hermanniensis (1) | | | | | | | | | +--Vagococcus sp. AC-1 (1) | | | | | | | | | +--Vagococcus carniphilus (1) | | | | | | | | | +--Enterococcus hirae ATCC 9790 (1) | | | | | | | | | +--Vagococcus teuberi (1) | | | | | | | +--Lactobacillaceae (12) | | | | | | | | | +--Lactobacillus plantarum WCFS1 (1) | | | | | | | | | +--Sharpea azabuensis (1) | | | | | | | | | +--Lactobacillus crispatus ST1 (1) | | | | | | | | | +--Paralactobacillus selangorensis (1) | | | | | | | | | +--Pediococcus stilesii (1) | | | | | | | | | +--Lactobacillus acetotolerans (1) | | | | | | | | | +--Lactobacillus casei ATCC 334 (2) | | | | | | | | | +--Lactobacillus acidophilus NCFM (1) | | | | | | | | | +--Lactobacillus johnsonii FI9785 (1) | | | | | | | | | +--Pediococcus argentinicus (1) | | | | | | | | | +--Pediococcus acidilactici DSM 20284 (1) | | | | | | | +--Aerococcaceae (4) | | | | | | | +--Aerococcus sanguinicola (1) | | | | | | | +--Facklamia miroungae (1) | | | | | | | +--Eremococcus coleocola ACS-139-V-Col8 (1) | | | | | | | +--Ignavigranum ruoffiae (1) | | | | | +--Bacillales (49) | | | | | | | +--Alicyclobacillaceae (10) | | | | | | | | | +--Alicyclobacillus macrosporangiidus (4) | | | | | | | | | +--Alicyclobacillus ferrooxydans (3) | | | | | | | | | +--Alicyclobacillus hesperidum (2) | | | | | | | | | +--Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 (1) | | | | | | | +--Bacillaceae (22) | | | | | | | | | +--Bacillus megaterium QM B1551 (1) | | | | | | | | | +--Bacillus shackletonii (1) | | | | | | | | | +--Geobacillus kaustophilus HTA426 (1) | | | | | | | | | +--Bacillus oleronius (1) | | | | | | | | | +--Caldalkalibacillus thermarum TA2.A1 (1) | | | | | | | | | +--Bacillus sporothermodurans (1) | | | | | | | | | +--Bacillus [pallidus] (1) | | | | | | | | | +--Bacillus ginsengihumi (1) | | | | | | | | | +--Bacillus galactosidilyticus (1) | | | | | | | | | +--Geobacillus caldoproteolyticus (3) | | | | | | | | | +--Sediminibacillus albus (1) | | | | | | | | | +--Bacillus (2) | | | | | | | | | | | +--Bacillus cereus ATCC 14579 (1) | | | | | | | | | | | +--Bacillus anthracis str. 'Ames Ancestor' (1) | | | | | | | | | +--Bacillus aquimaris (1) | | | | | | | | | +--Geobacillus sp. C161ab (1) | | | | | | | | | +--Bacillus agaradhaerens (1) | | | | | | | | | +--Bacillus alkalidiazotrophicus (1) | | | | | | | | | +--Halolactibacillus alkaliphilus (1) | | | | | | | | | +--Anoxybacillus amylolyticus (1) | | | | | | | | | +--Bacillus koreensis (1) | | | | | | | +--Paenibacillaceae (16) | | | | | | | | | +--Paenibacillus cellulosilyticus (1) | | | | | | | | | +--Paenibacillus graminis (1) | | | | | | | | | +--Thermobacillus composti KWC4 (1) | | | | | | | | | +--Paenibacillus stellifer (1) | | | | | | | | | +--Brevibacillus sp. CJ71 (1) | | | | | | | | | +--Paenibacillus rhizosphaerae (1) | | | | | | | | | +--Paenibacillus macerans (1) | | | | | | | | | +--Paenibacillus sp. D9 (1) | | | | | | | | | +--Paenibacillus donghaensis (1) | | | | | | | | | +--Fontibacillus panacisegetis (1) | | | | | | | | | +--Paenibacillus durus (1) | | | | | | | | | +--Brevibacillus laterosporus LMG 15441 (1) | | | | | | | | | +--Paenibacillus sp. oral taxon 786 str. D14 (1) | | | | | | | | | +--Paenibacillus wynnii (1) | | | | | | | | | +--Aneurinibacillusgroup (2) | | | | | | | | | +--Aneurinibacillus danicus (1) | | | | | | | | | +--Aneurinibacillus migulanus (1) | | | | | | | +--Sporolactobacillaceae (1) | | | | | | | +--Scopulibacillus darangshiensis (1) | | | | | +--Erysipelotrichi (6) | | | | | +--Erysipelotrichales (6) | | | | | +--Erysipelotrichaceae (6) | | | | | +--Coprobacillus sp. 29_1 (1) | | | | | +--Erysipelothrix inopinata (1) | | | | | +--Turicibacter sp. HGF1 (1) | | | | | +--Holdemania filiformis (1) | | | | | +--Erysipelothrix rhusiopathiae ATCC 19414 (1) | | | | | +--Solobacterium moorei F0204 (1) | | | +--Thermodesulfobacteriota (5) | | | | | +--Desulfobacteria (1) | | | | | | | +--Desulfobacterales (1) | | | | | | | +--Desulfosarcinaceae (1) | | | | | | | +--Desulfosarcina widdelii (1) | | | | | +--Syntrophobacteria (1) | | | | | | | +--Syntrophobacterales (1) | | | | | | | +--Syntrophobacteraceae (1) | | | | | | | +--Desulfoglaeba (1) | | | | | | | +--Desulfoglaeba alkanexedens ALDC (1) | | | | | +--Thermodesulfobacteria (1) | | | | | | | +--Thermodesulfobacteriales (1) | | | | | | | +--Thermodesulfobacteriaceae (1) | | | | | | | +--Thermosulfuriphilus ammonigenes (1) | | | | | +--Desulfuromonadia (2) | | | | | +--Geobacterales (2) | | | | | +--Geobacteraceae (2) | | | | | +--Geobacter (1) | | | | | | | +--Geobacter sp. SVR (1) | | | | | +--Oryzomonas rubra (1) | | | +--bacterium D16-59 (1) | +--Viruses (1) | | | +--Duplodnaviria (1) | | | +--Heunggongvirae (1) | | | +--Uroviricota (1) | | | +--Caudoviricetes (1) | | | +--Acinetobacter phage MD-2021a (1) | +--Plautia stali symbiont (2) | +--Archaea (85) | +--CandidatusThermoplasmatota (1) | | | +--Thermoplasmata (1) | | | +--Thermoplasmatales (1) | | | +--Cuniculiplasmataceae (1) | | | +--Cuniculiplasma (1) | | | +--Cuniculiplasma sp. C_DKE (1) | +--TACKgroup (9) | | | +--Nitrososphaerota (3) | | | | | +--Nitrososphaerotaincertaesedis (2) | | | | | | | +--Candidatus Nitrosotalea sinensis (1) | | | | | | | +--Nitrosotalea (1) | | | | | | | +--Candidatus Nitrosotalea sp. TS (1) | | | | | +--Nitrososphaeria (1) | | | | | +--Nitrosopumilales (1) | | | | | +--Nitrosopumilaceae (1) | | | | | +--Nitrosopumilus (1) | | | | | +--Nitrosopumilus sp. b1 (1) | | | +--Thaumarchaeota (1) | | | | | +--Nitrososphaeria (1) | | | | | +--Nitrososphaerales (1) | | | | | +--Nitrososphaeraceae (1) | | | | | +--Nitrososphaera (1) | | | | | +--Candidatus Nitrososphaera gargensis Ga9.2 (1) | | | +--Crenarchaeota (2) | | | | | +--Thermoprotei (2) | | | | | +--Sulfolobales (2) | | | | | +--Sulfolobaceae (2) | | | | | +--Metallosphaera (1) | | | | | | | +--Metallosphaera yellowstonensis MK1 (1) | | | | | +--Candidatus Acidianus copahuensis (1) | | | +--Thermoproteota (3) | | | +--Thermoprotei (3) | | | +--Sulfolobales (3) | | | +--Sulfolobales archaeon SCGC AB-777_K20 (1) | | | +--Sulfolobaceae (1) | | | | | +--Sulfodiicoccus acidiphilus (1) | | | +--Sulfolobales archaeon SCGC AB-777_J03 (1) | +--Thaumarchaeota (1) | | | +--Nitrososphaerales (1) | | | +--Nitrososphaeraceae (1) | | | +--Nitrososphaera viennensis EN76 (1) | +--Asgardgroup (1) | | | +--CandidatusThorarchaeota (1) | | | +--Thorarchaeota archaeon (strain OWC) (1) | +--archaeon HR04 (1) | +--archaeon HR05 (1) | +--uncultured archaeon A07HR60 (1) | +--Crenarchaeota (6) | | | +--Thermoprotei (6) | | | +--Sulfolobales (6) | | | +--Sulfolobaceae (6) | | | +--Metallosphaera sedula DSM 5348 (1) | | | +--Acidianus sulfidivorans JP7 (1) | | | +--Sulfolobus solfataricus P2 (1) | | | +--Sulfolobus metallicus DSM 6482 (1) | | | +--Stygiolobus azoricus (1) | | | +--Acidianus brierleyi (1) | +--Euryarchaeota (64) | +--Methanomicrobia (19) | | | +--Methanomicrobiales (10) | | | | | +--Methanospirillaceae (3) | | | | | | | +--Methanospirillum hungatei JF-1 (3) | | | | | +--Methanomicrobiaceae (2) | | | | | | | +--Methanofollis formosanus (2) | | | | | +--Generaincertaesedis (5) | | | | | +--Methanosphaerula palustris E1-9c (2) | | | | | +--Methanoregula formicicum SMSP (1) | | | | | +--Methanoregula boonei 6A8 (2) | | | +--Methanocellales (4) | | | | | +--Methanocellaceae (4) | | | | | +--Methanocella sp. HZ254 (4) | | | +--Methanosarcinales (5) | | | +--Methanosarcinaceae (1) | | | | | +--Methanosarcina acetivorans C2A (1) | | | +--unclassifiedMethanosarcinales (1) | | | | | +--ANME-2cluster (1) | | | | | +--Candidatus Syntrophoarchaeum caldarius (1) | | | +--CandidatusMethanoperedenaceae (3) | | | +--Candidatus Methanoperedens nitroreducens (3) | +--Methanobacteria (12) | | | +--Methanobacteriales (12) | | | +--Methanobacteriaceae archaeon RMAS (1) | | | +--Methanobacteriaceae (11) | | | +--Methanobrevibacter (2) | | | | | +--Methanobrevibacter arboriphilus JCM 13429 = DSM 1125 (2) | | | +--Methanobacterium congolense (1) | | | +--Methanobacterium sp. A39 (2) | | | +--Methanobacterium sp. AL-21 (1) | | | +--Methanosphaera stadtmanae DSM 3091 (1) | | | +--Methanobrevibacter sp. AbM4 (1) | | | +--Methanobacterium sp. MB1 (1) | | | +--Methanobrevibacter filiformis (1) | | | +--Methanothermobacter thermautotrophicus str. Delta H (1) | +--Archaeoglobi (3) | | | +--Archaeoglobales (3) | | | +--Archaeoglobaceae (3) | | | +--Archaeoglobus veneficus SNP6 (1) | | | +--Archaeoglobus fulgidus DSM 4304 (1) | | | +--Archaeoglobus sp. PM70-1 (1) | +--Methanomadagroup (3) | | | +--Methanobacteria (3) | | | +--Methanobacteriales (3) | | | +--Methanobacteriaceae (3) | | | +--Candidatus Methanobinarius endosymbioticus (2) | | | +--Methanobacteriaceae archaeon (1) | +--Thermococci (4) | | | +--Thermococcales (4) | | | +--Thermococcaceae (4) | | | +--Thermococcus kodakarensis KOD1 (1) | | | +--Pyrococcus furiosus DSM 3638 (1) | | | +--Thermococcus barophilus MP (1) | | | +--Thermococcus sibiricus MM 739 (1) | +--Thermoplasmata (3) | | | +--Thermoplasmatales (3) | | | +--Thermoplasmatales archaeon A-plasma (1) | | | +--Thermoplasmatales archaeon E-plasma (1) | | | +--Thermoplasmatales archaeon I-plasma (1) | +--Aciduliprofundum boonei T469 (2) | +--Halobacteria (10) | | | +--halophilic archaeon MH1-16-3 (1) | | | +--Halobacteriales (9) | | | +--Halococcaceae (2) | | | | | +--Halococcus (2) | | | | | +--Halococcus saccharolyticus DSM 5350 (1) | | | | | +--Halococcus hamelinensis 100A6 (1) | | | +--Halobacteriaceae (6) | | | | | +--Halarchaeum (2) | | | | | | | +--Halarchaeum acidiphilum MH1-52-1 (2) | | | | | +--Halococcus morrhuae DSM 1307 (1) | | | | | +--Halalkalicoccus sp. YIM 93701 (1) | | | | | +--Haladaptatus paucihalophilus DX253 (2) | | | +--Halobacteriaceae archaeon tADL (1) | +--Stenosarchaeagroup (8) | +--Methanomicrobia (3) | | | +--Methanosarcinales (3) | | | +--Methanosarcinaceae (2) | | | | | +--Methanolobus halotolerans (2) | | | +--CandidatusMethanoperedenaceae (1) | | | +--Methanoperedens (1) | | | +--Candidatus Methanoperedens sp. (1) | +--Halobacteria (5) | +--Haloferacales (1) | | | +--Halorubraceae (1) | | | +--Halonotius terrestris (1) | +--Halobacteriales (4) | +--Natronoarchaeaceae (1) | | | +--Natranaeroarchaeum sulfidigenes (1) | +--Haloarculaceae (1) | | | +--Halomicroarcula salinisoli (1) | +--Halobacteriaceae (2) | +--Halarchaeum (1) | | | +--Halarchaeum sp. CBA1220 (1) | +--Halocalculus aciditolerans (1)