# Species tree for RF01695 # Generated from Rfam version 15.00 | +--Eukaryota (124) | | | +--Alveolata (1) | | | | | +--Ciliophora (1) | | | | | +--Postciliodesmatophora (1) | | | | | +--Heterotrichea (1) | | | | | +--Heterotrichida (1) | | | | | +--Stentoridae (1) | | | | | +--Stentor coeruleus (1) | | | +--Metazoa (69) | | | | | +--Nematoda (12) | | | | | | | +--Chromadorea (12) | | | | | | | +--Oxyurida (1) | | | | | | | | | +--Oxyuroidea (1) | | | | | | | | | +--Oxyuridae (1) | | | | | | | | | +--Enterobius vermicularis (1) | | | | | | | +--Rhabditida (11) | | | | | | | +--Strongylida (4) | | | | | | | | | +--Strongyloidea (4) | | | | | | | | | +--Strongylidae (4) | | | | | | | | | +--Cyathostominae (4) | | | | | | | | | +--Cylicocyclus nassatus (4) | | | | | | | +--Rhabditoidea (4) | | | | | | | | | +--Rhabditidae (4) | | | | | | | | | +--Peloderinae (3) | | | | | | | | | | | +--Caenorhabditis remanei (3) | | | | | | | | | +--Mesorhabditinae (1) | | | | | | | | | +--Mesorhabditis spiculigera (1) | | | | | | | +--Panagrolaimoidea (3) | | | | | | | +--Panagrolaimidae (3) | | | | | | | +--Panagrolaimus superbus (3) | | | | | +--Chordata (42) | | | | | | | +--Craniata (42) | | | | | | | +--Vertebrata (42) | | | | | | | +--Euteleostomi (42) | | | | | | | +--Testudines (1) | | | | | | | | | +--Cryptodira (1) | | | | | | | | | +--Testudinoidea (1) | | | | | | | | | +--Chelydridae (1) | | | | | | | | | +--Platysternon megacephalum (big-headed turtle) (1) | | | | | | | +--Archosauria (41) | | | | | | | +--Dinosauria (41) | | | | | | | +--Saurischia (41) | | | | | | | +--Theropoda (41) | | | | | | | +--Coelurosauria (41) | | | | | | | +--Aves (41) | | | | | | | +--Neognathae (41) | | | | | | | +--Passeriformes (21) | | | | | | | | | +--Passeroidea (1) | | | | | | | | | | | +--Fringillidae (1) | | | | | | | | | | | +--Emberizinae (1) | | | | | | | | | | | +--Emberizini (1) | | | | | | | | | | | +--Spizella passerina (chipping sparrow) (1) | | | | | | | | | +--Corvoidea (9) | | | | | | | | | | | +--Irenidae (9) | | | | | | | | | | | +--Chloropsis hardwickii (9) | | | | | | | | | +--Timaliidae (11) | | | | | | | | | +--Pteruthius melanotis (11) | | | | | | | +--Musophagiformes (20) | | | | | | | +--Musophagidae (20) | | | | | | | +--Corythaeola cristata (great blue turaco) (20) | | | | | +--Arthropoda (13) | | | | | | | +--Hexapoda (13) | | | | | | | +--Insecta (13) | | | | | | | +--Pterygota (13) | | | | | | | +--Neoptera (13) | | | | | | | +--Endopterygota (4) | | | | | | | | | +--Coleoptera (4) | | | | | | | | | +--Polyphaga (4) | | | | | | | | | +--Cucujiformia (4) | | | | | | | | | +--Chrysomeloidea (3) | | | | | | | | | | | +--Chrysomelidae (3) | | | | | | | | | | | +--Bruchinae (3) | | | | | | | | | | | +--Bruchini (3) | | | | | | | | | | | +--Callosobruchus maculatus (cowpea weevil) (3) | | | | | | | | | +--Curculionidae (1) | | | | | | | | | +--Scolytinae (1) | | | | | | | | | +--Dendroctonus ponderosae (mountain pine beetle) (1) | | | | | | | +--Paraneoptera (9) | | | | | | | +--Hemiptera (9) | | | | | | | +--Euhemiptera (7) | | | | | | | | | +--Heteroptera (7) | | | | | | | | | +--Panheteroptera (7) | | | | | | | | | +--Cimicomorpha (7) | | | | | | | | | +--Reduviidae (6) | | | | | | | | | | | +--Triatominae (6) | | | | | | | | | | | +--Rhodnius prolixus (6) | | | | | | | | | +--Miridae (1) | | | | | | | | | +--Dicyphina (1) | | | | | | | | | +--Nesidiocoris tenuis (1) | | | | | | | +--Sternorrhyncha (2) | | | | | | | +--Aphidiformes (2) | | | | | | | +--Aphidoidea (2) | | | | | | | +--Aphididae (2) | | | | | | | +--Aphidini (2) | | | | | | | +--Aphis (2) | | | | | | | +--Aphis craccivora (cowpea aphid) (2) | | | | | +--Annelida (1) | | | | | | | +--Polychaeta (1) | | | | | | | +--Scolecida (1) | | | | | | | +--Capitellida (1) | | | | | | | +--Capitellidae (1) | | | | | | | +--Capitella teleta (1) | | | | | +--Echinodermata (1) | | | | | +--Eleutherozoa (1) | | | | | +--Echinozoa (1) | | | | | +--Echinoidea (1) | | | | | +--Euechinoidea (1) | | | | | +--Echinacea (1) | | | | | +--Echinoida (1) | | | | | +--Strongylocentrotidae (1) | | | | | +--Strongylocentrotus purpuratus (1) | | | +--Fungi (29) | | | | | +--Glomeromycota (1) | | | | | | | +--Glomeromycetes (1) | | | | | | | +--Diversisporales (1) | | | | | | | +--Gigasporaceae (1) | | | | | | | +--Gigaspora margarita (1) | | | | | +--Microsporidia (1) | | | | | | | +--Enterocytozoonidae (1) | | | | | | | +--Enterocytozoon bieneusi H348 (1) | | | | | +--Fungiincertaesedis (11) | | | | | | | +--Basalfungallineages (11) | | | | | | | +--Mucoromycotina (11) | | | | | | | +--Mucorales (7) | | | | | | | | | +--Mucoraceae (7) | | | | | | | | | +--Rhizopus delemar (5) | | | | | | | | | +--Rhizopus oryzae (2) | | | | | | | +--Mortierellales (4) | | | | | | | +--Mortierellaceae (4) | | | | | | | +--Mortierella gamsii (4) | | | | | +--Dikarya (16) | | | | | +--Ascomycota (16) | | | | | +--Pezizomycotina (16) | | | | | +--Eurotiomycetes (15) | | | | | | | +--Chaetothyriomycetidae (15) | | | | | | | +--Chaetothyriales (15) | | | | | | | +--Herpotrichiellaceae (15) | | | | | | | +--Capronia peltigerae (15) | | | | | +--Sordariomycetes (1) | | | | | +--Sordariomycetidae (1) | | | | | +--Coniochaetales (1) | | | | | +--Coniochaetaceae (1) | | | | | +--Coniochaeta pulveracea (1) | | | +--Rhizaria (1) | | | | | +--Foraminifera (1) | | | | | +--Reticulomyxidae (1) | | | | | +--Reticulomyxa filosa (1) | | | +--Viridiplantae (12) | | | | | +--Streptophyta (12) | | | | | +--Embryophyta (9) | | | | | | | +--Tracheophyta (9) | | | | | | | +--Spermatophyta (9) | | | | | | | +--Magnoliophyta (9) | | | | | | | +--Liliopsida (1) | | | | | | | | | +--Poales (1) | | | | | | | | | +--Poaceae (1) | | | | | | | | | +--PACMADclade (1) | | | | | | | | | +--Panicoideae (1) | | | | | | | | | +--Paniceae (1) | | | | | | | | | +--Digitaria exilis (1) | | | | | | | +--eudicotyledons (8) | | | | | | | +--coreeudicotyledons (8) | | | | | | | +--rosids (7) | | | | | | | | | +--fabids (1) | | | | | | | | | | | +--Fabales (1) | | | | | | | | | | | +--Fabaceae (1) | | | | | | | | | | | +--Papilionoideae (1) | | | | | | | | | | | +--Trifolieae (1) | | | | | | | | | | | +--Medicago truncatula (barrel medic) (1) | | | | | | | | | +--malvids (6) | | | | | | | | | +--Malvales (6) | | | | | | | | | +--Malvaceae (6) | | | | | | | | | +--Grewioideae (6) | | | | | | | | | +--Corchorus capsularis (3) | | | | | | | | | +--Corchorus olitorius (3) | | | | | | | +--asterids (1) | | | | | | | +--lamiids (1) | | | | | | | +--Gentianales (1) | | | | | | | +--Rubiaceae (1) | | | | | | | +--Ixoroideae (1) | | | | | | | +--Coffeeae (1) | | | | | | | +--Coffea canephora (1) | | | | | +--Streptophytina (3) | | | | | +--Zygnemophyceae (3) | | | | | +--Zygnematophycidae (3) | | | | | +--Desmidiales (3) | | | | | +--Closteriaceae (3) | | | | | +--Closterium (3) | | | | | +--Closteriumperacerosum-strigosum-littoralecomplex (3) | | | | | +--Closterium sp. NIES-67 (3) | | | +--Opisthokonta (12) | | | +--Metazoa (4) | | | | | +--Eumetazoa (4) | | | | | +--Bilateria (4) | | | | | +--Protostomia (4) | | | | | +--Ecdysozoa (4) | | | | | +--Nematoda (4) | | | | | +--Chromadorea (4) | | | | | +--Rhabditida (4) | | | | | +--Rhabditina (4) | | | | | +--Rhabditomorpha (4) | | | | | +--Rhabditoidea (4) | | | | | +--Rhabditidae (4) | | | | | +--Rhabditidaeincertaesedis (4) | | | | | +--Diploscapter pachys (4) | | | +--Fungi (8) | | | +--Dikarya (4) | | | | | +--Ascomycota (3) | | | | | | | +--saccharomyceta (3) | | | | | | | +--Pezizomycotina (3) | | | | | | | +--leotiomyceta (3) | | | | | | | +--sordariomyceta (3) | | | | | | | +--Sordariomycetes (3) | | | | | | | +--Xylariomycetidae (3) | | | | | | | +--Xylariales (3) | | | | | | | +--Xylarialesincertaesedis (3) | | | | | | | +--Monosporascus (3) | | | | | | | +--Monosporascus sp. 5C6A (3) | | | | | +--Basidiomycota (1) | | | | | +--Pucciniomycotina (1) | | | | | +--Pucciniomycetes (1) | | | | | +--Pucciniales (1) | | | | | +--Pucciniaceae (1) | | | | | +--Puccinia (1) | | | | | +--Pucciniastriiformis (1) | | | | | +--Puccinia striiformis f. sp. tritici PST-78 (1) | | | +--Fungiincertaesedis (4) | | | +--Mucoromycota (4) | | | +--Mucoromycotina (4) | | | +--Mucoromycetes (4) | | | +--Mucorales (4) | | | +--Mucorineae (4) | | | +--Mucoraceae (4) | | | +--Apophysomyces (4) | | | +--Apophysomyces sp. BC1034 (4) | +--Bacteria (1786) | | | +--Actinobacteria (1) | | | | | +--Actinobacteridae (1) | | | | | +--Actinomycetales (1) | | | | | +--Micrococcineae (1) | | | | | +--Microbacteriaceae (1) | | | | | +--Microbacterium barkeri (1) | | | +--Thermodesulfobacteriota (2) | | | | | +--Desulfobacteria (2) | | | | | +--Desulfobacterales (2) | | | | | +--Desulfosarcinaceae (2) | | | | | +--Desulfosarcina (1) | | | | | | | +--Desulfosarcina ovata subsp. ovata (1) | | | | | +--Desulfosarcina widdelii (1) | | | +--unclassifiedBacteria (2) | | | | | +--bacteria symbiont BFo2 of Frankliniella occidentalis (2) | | | +--Proteobacteria (1170) | | | | | +--Olavius algarvensis Gamma 1 endosymbiont (1) | | | | | +--Alphaproteobacteria (15) | | | | | | | +--Rhizobiales (1) | | | | | | | | | +--Cohaesibacter gelatinilyticus (1) | | | | | | | +--Rhodospirillales (2) | | | | | | | | | +--Rhodospirillaceae (2) | | | | | | | | | +--Haematospirillum jordaniae (2) | | | | | | | +--Rhizobiales bacterium 8.047 (1) | | | | | | | +--Sphingomonadales (4) | | | | | | | | | +--Sphingomonadaceae (4) | | | | | | | | | +--Sphingomonas sp. IC081 (1) | | | | | | | | | +--Sphingomonas sp. LNB2 (1) | | | | | | | | | +--Novosphingobium sp. FSW06-99 (1) | | | | | | | | | +--Novosphingobium sp. ST904 (1) | | | | | | | +--Rhodobacterales (7) | | | | | | | +--Rhodobacteraceae bacterium KLH11 (1) | | | | | | | +--Rhodobacteraceae (6) | | | | | | | +--Nesiotobacter exalbescens (1) | | | | | | | +--Roseovarius sp. B108 (1) | | | | | | | +--Marinosulfonomonas sp. PRT-SC04 (1) | | | | | | | +--Roseibium sp. TrichSKD4 (1) | | | | | | | +--Labrenzia sp. YC6927 (1) | | | | | | | +--Antarctobacter sp. JLT354-W (1) | | | | | +--Deltaproteobacteria (13) | | | | | | | +--Desulfuromonadales (2) | | | | | | | | | +--Desulfuromonadaceae (1) | | | | | | | | | | | +--Desulfuromonas thiophila (1) | | | | | | | | | +--Geobacteraceae (1) | | | | | | | | | +--Geoalkalibacter subterraneus (1) | | | | | | | +--Desulfobacterales (11) | | | | | | | +--Desulfobulbaceae (6) | | | | | | | | | +--Desulfotalea psychrophila LSv54 (3) | | | | | | | | | +--Desulfobulbus propionicus DSM 2032 (2) | | | | | | | | | +--Desulfurivibrio alkaliphilus AHT2 (1) | | | | | | | +--Desulfobacteraceae (5) | | | | | | | +--Desulfobacula toluolica Tol2 (1) | | | | | | | +--Desulfobotulus alkaliphilus (4) | | | | | +--delta/epsilonsubdivisions (2) | | | | | | | +--Deltaproteobacteria (2) | | | | | | | +--Desulfuromonadales (1) | | | | | | | | | +--Desulfuromonadaceae (1) | | | | | | | | | +--Desulfuromonas sp. DDH964 (1) | | | | | | | +--Desulfobacterales (1) | | | | | | | +--Desulfobacteraceae (1) | | | | | | | +--Desulfobacterium (1) | | | | | | | +--Desulfobacterium vacuolatum DSM 3385 (1) | | | | | +--Gammaproteobacteria (878) | | | | | | | +--unclassifiedGammaproteobacteria (3) | | | | | | | | | +--Competibacteraceae (3) | | | | | | | | | +--CandidatusCompetibacter (2) | | | | | | | | | | | +--Candidatus Competibacter denitrificans Run_A_D11 (2) | | | | | | | | | +--CandidatusContendobacter (1) | | | | | | | | | +--Candidatus Contendobacter odensis Run_B_J11 (1) | | | | | | | +--Pasteurellales (40) | | | | | | | | | +--Haemophilus felis (3) | | | | | | | | | +--Bisgaard Taxon 5 (1) | | | | | | | | | +--Actinobacillus rossii (4) | | | | | | | | | +--Pasteurellaceae (30) | | | | | | | | | | | +--Pasteurella multocida subsp. multocida str. Pm70 (1) | | | | | | | | | | | +--Haemophilus paraphrohaemolyticus (1) | | | | | | | | | | | +--Phocoenobacter uteri (1) | | | | | | | | | | | +--Histophilus somni (2) | | | | | | | | | | | +--Haemophilus parasuis SH0165 (2) | | | | | | | | | | | +--Pasteurella (1) | | | | | | | | | | | | | +--Pasteurella bettyae CCUG 2042 (1) | | | | | | | | | | | +--Actinobacillus muris (4) | | | | | | | | | | | +--Nicoletella semolina (1) | | | | | | | | | | | +--Aggregatibacter segnis ATCC 33393 (1) | | | | | | | | | | | +--Haemophilus paracuniculus (3) | | | | | | | | | | | +--Gallibacterium salpingitidis (3) | | | | | | | | | | | +--Actinobacillus delphinicola (1) | | | | | | | | | | | +--Volucribacter psittacicida (3) | | | | | | | | | | | +--Lonepinella koalarum (1) | | | | | | | | | | | +--Actinobacillus indolicus (1) | | | | | | | | | | | +--unclassifiedPasteurellaceae (2) | | | | | | | | | | | | | +--Pasteurellaceae bacterium 15-036681 (2) | | | | | | | | | | | +--Haemophilus pittmaniae (1) | | | | | | | | | | | +--Avibacterium volantium (1) | | | | | | | | | +--Pasteurellaceae bacterium Baika1 (2) | | | | | | | +--Enterobacterales (60) | | | | | | | | | +--Yersiniaceae (11) | | | | | | | | | | | +--Serratia sp. DD3 (1) | | | | | | | | | | | +--Ewingella (4) | | | | | | | | | | | | | +--Ewingella americana ATCC 33852 (4) | | | | | | | | | | | +--Rahnella (6) | | | | | | | | | | | +--Rahnella aquatilis CIP 78.65 = ATCC 33071 (6) | | | | | | | | | +--Pectobacteriaceae (11) | | | | | | | | | | | +--Sodalis sp. TME1 (11) | | | | | | | | | +--Morganellaceae (17) | | | | | | | | | | | +--Moellerella (1) | | | | | | | | | | | | | +--Moellerella wisconsensis ATCC 35017 (1) | | | | | | | | | | | +--Xenorhabdus (16) | | | | | | | | | | | +--Xenorhabdus szentirmaii DSM 16338 (8) | | | | | | | | | | | +--Xenorhabdus bovienii str. kraussei Quebec (8) | | | | | | | | | +--Enterobacteriaceae (17) | | | | | | | | | | | +--Klebsiella sp. RIT-PI-d (2) | | | | | | | | | | | +--Klebsiella michiganensis (4) | | | | | | | | | | | +--Atlantibacter (2) | | | | | | | | | | | | | +--Atlantibacter hermannii NBRC 105704 (2) | | | | | | | | | | | +--Buttiauxella (3) | | | | | | | | | | | | | +--Buttiauxella agrestis ATCC 33320 (3) | | | | | | | | | | | +--Mangrovibacter sp. MFB070 (6) | | | | | | | | | +--Erwiniaceae (4) | | | | | | | | | +--Erwinia iniecta (1) | | | | | | | | | +--Erwinia sp. Leaf53 (1) | | | | | | | | | +--Tatumella (2) | | | | | | | | | +--Tatumella ptyseos ATCC 33301 (2) | | | | | | | +--Aeromonadales (1) | | | | | | | | | +--Aeromonadaceae (1) | | | | | | | | | +--Aeromonas simiae (1) | | | | | | | +--Cardiobacteriales (10) | | | | | | | | | +--Cardiobacteriaceae (10) | | | | | | | | | +--Suttonella ornithocola (3) | | | | | | | | | +--Dichelobacter nodosus VCS1703A (4) | | | | | | | | | +--Suttonella indologenes (1) | | | | | | | | | +--Cardiobacterium valvarum (2) | | | | | | | +--Methylococcales (29) | | | | | | | | | +--Methylococcaceae (29) | | | | | | | | | +--Methylomicrobium (1) | | | | | | | | | | | +--Methylomicrobium alcaliphilum 20Z (1) | | | | | | | | | +--Methylomagnum ishizawai (13) | | | | | | | | | +--Methylobacter tundripaludum SV96 (3) | | | | | | | | | +--Methylomonas sp. DH-1 (3) | | | | | | | | | +--Methyloprofundus sedimenti (2) | | | | | | | | | +--Methylomonas methanica MC09 (1) | | | | | | | | | +--Methylomicrobium album BG8 (2) | | | | | | | | | +--Methylococcaceae bacterium Sn10-6 (2) | | | | | | | | | +--Methylomonas lenta (1) | | | | | | | | | +--Methylomonas denitrificans (1) | | | | | | | +--Alteromonadales (3) | | | | | | | | | +--Shewanellaceae (2) | | | | | | | | | | | +--Shewanella frigidimarina NCIMB 400 (1) | | | | | | | | | | | +--Shewanella mangrovi (1) | | | | | | | | | +--Alteromonadaceae (1) | | | | | | | | | +--Saccharophagus degradans 2-40 (1) | | | | | | | +--Celerinatantimonadaceae (1) | | | | | | | | | +--Celerinatantimonas diazotrophica (1) | | | | | | | +--Xanthomonadales (34) | | | | | | | | | +--Rhodanobacteraceae (2) | | | | | | | | | | | +--Frateuria (2) | | | | | | | | | | | +--Frateuria aurantia DSM 6220 (2) | | | | | | | | | +--Xanthomonadaceae (31) | | | | | | | | | | | +--Aquimonas voraii (3) | | | | | | | | | | | +--Dokdonella sp. PYM5-11 (10) | | | | | | | | | | | +--Dyella soli (1) | | | | | | | | | | | +--Pseudoxanthomonas taiwanensis (2) | | | | | | | | | | | +--Stenotrophomonas sp. BIIR7 (1) | | | | | | | | | | | +--Lysobacter soli (1) | | | | | | | | | | | +--Stenotrophomonas (10) | | | | | | | | | | | | | +--Stenotrophomonas maltophilia K279a (10) | | | | | | | | | | | +--Xanthomonas campestris pv. campestris str. ATCC 33913 (1) | | | | | | | | | | | +--Xanthomonas oryzae pv. oryzae KACC10331 (1) | | | | | | | | | | | +--Pseudoxanthomonas sp. XC21-2 (1) | | | | | | | | | +--Pseudomonas boreopolis (1) | | | | | | | +--Enterobacteriales (192) | | | | | | | | | +--primary endosymbiont of Sitophilus oryzae (9) | | | | | | | | | +--Enterobacteriaceae (183) | | | | | | | | | +--Dickeya dadantii 3937 (4) | | | | | | | | | +--Shigella boydii CDC 3083-94 (4) | | | | | | | | | +--Sodalis glossinidius str. 'morsitans' (20) | | | | | | | | | +--Xenorhabdus japonica (4) | | | | | | | | | +--Cedecea neteri (1) | | | | | | | | | +--Leminorella richardii (3) | | | | | | | | | +--Serratia sp. ATCC 39006 (1) | | | | | | | | | +--Salmonella (1) | | | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1) | | | | | | | | | +--Trabulsiella odontotermitis (3) | | | | | | | | | +--Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- (2) | | | | | | | | | +--Pantoea ananatis LMG 20103 (1) | | | | | | | | | +--Xenorhabdus innexi (9) | | | | | | | | | +--Escherichia coli E24377A (5) | | | | | | | | | +--Escherichia coli O157:H7 (3) | | | | | | | | | +--Salmonella enterica subsp. arizonae (3) | | | | | | | | | +--Shigella dysenteriae Sd197 (3) | | | | | | | | | +--Escherichia coli O83:H1 str. NRG 857C (1) | | | | | | | | | +--Yersinia ruckeri (1) | | | | | | | | | +--Serratia odorifera DSM 4582 (1) | | | | | | | | | +--aphidsecondarysymbionts (7) | | | | | | | | | | | +--Candidatus Regiella insecticola LSR1 (3) | | | | | | | | | | | +--Hamiltonella endosymbiont of Bemisia tabaci (4) | | | | | | | | | +--Shigella sonnei Ss046 (2) | | | | | | | | | +--Kluyvera cryocrescens (1) | | | | | | | | | +--Gibbsiella quercinecans (2) | | | | | | | | | +--Budvicia aquatica (1) | | | | | | | | | +--Xenorhabdus koppenhoeferi (4) | | | | | | | | | +--Enterobacter sp. 638 (3) | | | | | | | | | +--Arsenophonus nasoniae (son-killer infecting Nasonia vitripennis) (24) | | | | | | | | | +--Xenorhabdus cabanillasii (9) | | | | | | | | | +--Escherichia coli APEC O1 (2) | | | | | | | | | +--Photorhabdus luminescens subsp. laumondii TTO1 (3) | | | | | | | | | +--Enterobacter (5) | | | | | | | | | | | +--Enterobacter cloacae SCF1 (5) | | | | | | | | | +--Serratia ficaria (2) | | | | | | | | | +--Erwinia billingiae (2) | | | | | | | | | +--Yersinia pestis CO92 (3) | | | | | | | | | +--Shigella flexneri 2a str. 301 (3) | | | | | | | | | +--Edwardsiella hoshinae (2) | | | | | | | | | +--Brenneria goodwinii (3) | | | | | | | | | +--Cronobacter sakazakii ATCC BAA-894 (2) | | | | | | | | | +--Erwinia mallotivora (1) | | | | | | | | | +--Candidatus Erwinia dacicola (3) | | | | | | | | | +--Serratia (5) | | | | | | | | | | | +--Serratia symbiotica str. Tucson (5) | | | | | | | | | +--Citrobacter rodentium ICC168 (5) | | | | | | | | | +--Escherichia coli S88 (3) | | | | | | | | | +--Erwinia tracheiphila (8) | | | | | | | | | +--Escherichia blattae DSM 4481 (1) | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Poona (2) | | | | | | | | | +--Klebsiella pneumoniae subsp. ozaenae (4) | | | | | | | | | +--Lonsdalea quercina (1) | | | | | | | +--Oceanospirillales (50) | | | | | | | | | +--Oceanospirillaceae (4) | | | | | | | | | | | +--Marinomonas spartinae (2) | | | | | | | | | | | +--Motiliproteus sp. MSK22-1 (2) | | | | | | | | | +--Hahellaceae (3) | | | | | | | | | | | +--Endozoicomonas montiporae (3) | | | | | | | | | +--Saccharospirillaceae (15) | | | | | | | | | | | +--Gynuella (13) | | | | | | | | | | | | | +--Gynuella sunshinyii YC6258 (13) | | | | | | | | | | | +--Saccharospirillum salsuginis (2) | | | | | | | | | +--Endozoicomonaceae (1) | | | | | | | | | | | +--Parendozoicomonas haliclonae (1) | | | | | | | | | +--Halomonadaceae (15) | | | | | | | | | | | +--Halotalea alkalilenta (1) | | | | | | | | | | | +--Halomonas sp. 1513 (1) | | | | | | | | | | | +--Halomonas gudaonensis (1) | | | | | | | | | | | +--Halomonas variabilis (1) | | | | | | | | | | | +--Halomonas (2) | | | | | | | | | | | | | +--Halomonas ilicicola DSM 19980 (2) | | | | | | | | | | | +--Cobetia sp. UCD-24C (1) | | | | | | | | | | | +--Kushneria sp. Z35 (1) | | | | | | | | | | | +--Zymobactergroup (1) | | | | | | | | | | | | | +--Zymobacter palmae (1) | | | | | | | | | | | +--Salinicola sp. MIT1003 (2) | | | | | | | | | | | +--Halomonas sp. BC04 (1) | | | | | | | | | | | +--Halomonas chromatireducens (1) | | | | | | | | | | | +--Halomonas alimentaria (2) | | | | | | | | | +--Marinomonas sp. S3726 (3) | | | | | | | | | +--Marinomonas mediterranea MMB-1 (2) | | | | | | | | | +--Halomonadaceae bacterium PH27A (6) | | | | | | | | | +--unclassifiedOceanospirillales (1) | | | | | | | | | +--Oceanospirillales bacterium LUC14_002_19_P2 (1) | | | | | | | +--Pseudomonadales (412) | | | | | | | | | +--Pseudomonadaceae (327) | | | | | | | | | | | +--Pseudomonas fulva 12-X (1) | | | | | | | | | | | +--Pseudomonas asplenii (24) | | | | | | | | | | | +--Pseudomonas salomonii (32) | | | | | | | | | | | +--Oblitimonas alkaliphila (1) | | | | | | | | | | | +--Pseudomonas corrugata (29) | | | | | | | | | | | +--Pseudomonas fluorescens HK44 (24) | | | | | | | | | | | +--Pseudomonas aeruginosa PAO1 (1) | | | | | | | | | | | +--Pseudomonas panipatensis (15) | | | | | | | | | | | +--Pseudomonas sp. StFLB209 (14) | | | | | | | | | | | +--Rugamonas rubra (1) | | | | | | | | | | | +--Pseudomonas putida KT2440 (12) | | | | | | | | | | | +--Pseudomonas jinjuensis (4) | | | | | | | | | | | +--Pseudomonas fluorescens SBW25 (18) | | | | | | | | | | | +--Pseudomonas cremoricolorata (10) | | | | | | | | | | | +--Pseudomonas japonica (25) | | | | | | | | | | | +--Pseudomonas sp. HPB0071 (1) | | | | | | | | | | | +--Pseudomonas benzenivorans (4) | | | | | | | | | | | +--Pseudomonas rhizosphaerae (4) | | | | | | | | | | | +--Pseudomonas stutzeri A1501 (1) | | | | | | | | | | | +--Pseudomonas sp. FeS53a (12) | | | | | | | | | | | +--Pseudomonas indica (18) | | | | | | | | | | | +--Pseudomonas syringae pv. tomato str. DC3000 (3) | | | | | | | | | | | +--Pseudomonas sp. M47T1 (22) | | | | | | | | | | | +--Pseudomonas sp. BAY1663 (2) | | | | | | | | | | | +--Azomonas agilis (8) | | | | | | | | | | | +--Pseudomonas sp. 21C1 (3) | | | | | | | | | | | +--Pseudomonas (33) | | | | | | | | | | | | | +--Pseudomonasaeruginosagroup (18) | | | | | | | | | | | | | | | +--Pseudomonas resinovorans NBRC 106553 (18) | | | | | | | | | | | | | +--Pseudomonas knackmussii B13 (14) | | | | | | | | | | | | | +--Pseudomonas taeanensis MS-3 (1) | | | | | | | | | | | +--Azomonas macrocytogenes (4) | | | | | | | | | | | +--Pseudomonas oryzihabitans (1) | | | | | | | | | +--Moraxellaceae (82) | | | | | | | | | | | +--Moraxella atlantae (1) | | | | | | | | | | | +--Acinetobacter sp. ANC 4558 (2) | | | | | | | | | | | +--Acinetobacter sp. ADP1 (4) | | | | | | | | | | | +--Acinetobacter sp. TGL-Y2 (2) | | | | | | | | | | | +--Acinetobacter sp. CIP 102637 (3) | | | | | | | | | | | +--Moraxella (2) | | | | | | | | | | | | | +--Moraxella macacae 0408225 (2) | | | | | | | | | | | +--Acinetobacter qingfengensis (6) | | | | | | | | | | | +--Acinetobacter populi (9) | | | | | | | | | | | +--Acinetobacter marinus (1) | | | | | | | | | | | +--Moraxella caviae (1) | | | | | | | | | | | +--Moraxella nonliquefaciens (1) | | | | | | | | | | | +--Moraxella lincolnii (1) | | | | | | | | | | | +--Acinetobacter (49) | | | | | | | | | | | +--Acinetobacter gerneri DSM 14967 = CIP 107464 (1) | | | | | | | | | | | +--Acinetobacter calcoaceticus PHEA-2 (19) | | | | | | | | | | | +--Acinetobacter nectaris CIP 110549 (1) | | | | | | | | | | | +--Acinetobacter baumannii ATCC 19606 (19) | | | | | | | | | | | +--Acinetobacter guillouiae NIPH 991 (7) | | | | | | | | | | | +--Acinetobacter brisouii CIP 110357 (2) | | | | | | | | | +--Ventosimonadaceae (3) | | | | | | | | | +--Ventosimonas gracilis (3) | | | | | | | +--Vibrionales (28) | | | | | | | | | +--Vibrionaceae (28) | | | | | | | | | +--Vibrio fischeri ES114 (2) | | | | | | | | | +--Vibrio sp. S2757 (1) | | | | | | | | | +--Vibrio (21) | | | | | | | | | | | +--Vibrioharveyigroup (2) | | | | | | | | | | | | | +--Vibrio azureus NBRC 104587 (2) | | | | | | | | | | | +--Vibrio proteolyticus NBRC 13287 (1) | | | | | | | | | | | +--Vibrio aerogenes CECT 7868 (18) | | | | | | | | | +--Enterovibrio sp. sw014 (3) | | | | | | | | | +--Photobacterium damselae subsp. damselae CIP 102761 (1) | | | | | | | +--Salinisphaerales (1) | | | | | | | | | +--Salinisphaeraceae (1) | | | | | | | | | +--Salinisphaera sp. MKB5 (1) | | | | | | | +--Thiotrichales (3) | | | | | | | | | +--Thiotrichaceae (3) | | | | | | | | | +--Thiothrix eikelboomii (2) | | | | | | | | | +--Achromatium sp. WMS1 (1) | | | | | | | +--Chromatiales (10) | | | | | | | | | +--Ectothiorhodospiraceae (1) | | | | | | | | | | | +--Ectothiorhodospira sp. B7-7 (1) | | | | | | | | | +--Chromatiaceae (9) | | | | | | | | | +--Chromatium okenii (4) | | | | | | | | | +--Marichromatium purpuratum 984 (1) | | | | | | | | | +--Thiocystis violascens DSM 198 (2) | | | | | | | | | +--Nitrosococcus halophilus Nc4 (2) | | | | | | | +--Acidithiobacillales (1) | | | | | | | +--Acidithiobacillaceae (1) | | | | | | | +--Acidithiobacillus ferrooxidans ATCC 23270 (1) | | | | | +--Betaproteobacteria (252) | | | | | | | +--unclassifiedBetaproteobacteria (4) | | | | | | | | | +--Candidatus Accumulibacter aalborgensis (1) | | | | | | | | | +--Candidatus Accumulibacter sp. BA-93 (2) | | | | | | | | | +--Candidatus Accumulibacter sp. SK-11 (1) | | | | | | | +--Gallionellales (2) | | | | | | | | | +--Gallionellaceae (2) | | | | | | | | | +--Gallionella capsiferriformans ES-2 (1) | | | | | | | | | +--Ferriphaselus amnicola (1) | | | | | | | +--Burkholderiales (173) | | | | | | | | | +--Alcaligenaceae (4) | | | | | | | | | | | +--Bordetella sp. H567 (1) | | | | | | | | | | | +--Bordetella genomosp. 9 (1) | | | | | | | | | | | +--Bordetella avium 197N (1) | | | | | | | | | | | +--Candidimonas nitroreducens (1) | | | | | | | | | +--Sphaerotilus natans subsp. sulfidovorans (4) | | | | | | | | | +--Paucibacter toxinivorans (1) | | | | | | | | | +--Tepidimonas taiwanensis (1) | | | | | | | | | +--unclassifiedBurkholderiales (2) | | | | | | | | | | | +--BurkholderialesGeneraincertaesedis (2) | | | | | | | | | | | +--Rhizobacter sp. Root29 (2) | | | | | | | | | +--Oxalobacteraceae (11) | | | | | | | | | | | +--Collimonas fungivorans Ter331 (2) | | | | | | | | | | | +--Oxalobacter formigenes HOxBLS (2) | | | | | | | | | | | +--Oxalobacter formigenes OXCC13 (1) | | | | | | | | | | | +--Massilia sp. 333-1-0411 (2) | | | | | | | | | | | +--Oxalobacter vibrioformis (3) | | | | | | | | | | | +--Massilia sp. Root351 (1) | | | | | | | | | +--Leptothrix mobilis (1) | | | | | | | | | +--Burkholderiaceae (104) | | | | | | | | | | | +--Ralstonia sp. 5_2_56FAA (10) | | | | | | | | | | | +--Burkholderia xenovorans LB400 (8) | | | | | | | | | | | +--Cupriavidus basilensis (5) | | | | | | | | | | | +--Burkholderia sp. TNe-841 (1) | | | | | | | | | | | +--Burkholderia sediminicola (6) | | | | | | | | | | | +--Ralstonia solanacearum GMI1000 (7) | | | | | | | | | | | +--Paraburkholderia ginsengiterrae (5) | | | | | | | | | | | +--Burkholderia graminis C4D1M (2) | | | | | | | | | | | +--Burkholderia glathei (1) | | | | | | | | | | | +--Ralstonia eutropha H16 (7) | | | | | | | | | | | +--Chitinimonas (1) | | | | | | | | | | | | | +--Chitinimonas taiwanensis DSM 18899 (1) | | | | | | | | | | | +--Burkholderia sp. IMER-B1-49 (6) | | | | | | | | | | | +--Burkholderia endofungorum (2) | | | | | | | | | | | +--Burkholderia sp. OLGA172 (5) | | | | | | | | | | | +--Burkholderia sacchari (4) | | | | | | | | | | | +--Burkholderia (12) | | | | | | | | | | | | | +--Burkholderia pseudomallei K96243 (2) | | | | | | | | | | | | | +--Burkholderia singularis (3) | | | | | | | | | | | | | +--Burkholderia glumae PG1 (2) | | | | | | | | | | | | | +--Burkholderia dolosa AUO158 (2) | | | | | | | | | | | | | +--Burkholderia multivorans ATCC 17616 (1) | | | | | | | | | | | | | +--Burkholderia seminalis (2) | | | | | | | | | | | +--Burkholderia phenazinium (3) | | | | | | | | | | | +--Burkholderia sp. JPY461 (2) | | | | | | | | | | | +--Burkholderia sp. SRS-W-2-2016 (1) | | | | | | | | | | | +--Burkholderia glumae BGR1 (1) | | | | | | | | | | | +--Cupriavidus sp. USMAA2-4 (2) | | | | | | | | | | | +--Burkholderia sp. IMER-B1-33 (1) | | | | | | | | | | | +--Candidatus Glomeribacter gigasporarum BEG34 (5) | | | | | | | | | | | +--Burkholderia caryophylli (1) | | | | | | | | | | | +--Ralstonia solanacearum IPO1609 (4) | | | | | | | | | | | +--Burkholderia sp. ATSB16 (2) | | | | | | | | | +--Oxalobacteraceae bacterium Cr9-30 (9) | | | | | | | | | +--Ideonella dechloratans (1) | | | | | | | | | +--Sutterellaceae (3) | | | | | | | | | | | +--Sutterella (3) | | | | | | | | | | | +--Sutterella wadsworthensis HGA0223 (1) | | | | | | | | | | | +--Sutterella parvirubra YIT 11816 (1) | | | | | | | | | | | +--Sutterella wadsworthensis 2_1_59BFAA (1) | | | | | | | | | +--Comamonadaceae (28) | | | | | | | | | | | +--Acidovorax anthurii (1) | | | | | | | | | | | +--Rhodoferax fermentans (1) | | | | | | | | | | | +--Limnohabitans sp. T6-5 (1) | | | | | | | | | | | +--CandidatusSymbiobacter (1) | | | | | | | | | | | | | +--Candidatus Symbiobacter mobilis CR (1) | | | | | | | | | | | +--Simplicispira metamorpha (3) | | | | | | | | | | | +--Hydrogenophaga sp. IBVHS1 (3) | | | | | | | | | | | +--Polaromonas naphthalenivorans CJ2 (3) | | | | | | | | | | | +--Acidovorax sp. 12322-1 (2) | | | | | | | | | | | +--Delftia acidovorans SPH-1 (1) | | | | | | | | | | | +--Giesbergeria anulus (7) | | | | | | | | | | | +--Comamonas (2) | | | | | | | | | | | | | +--Comamonas aquatica DA1877 (2) | | | | | | | | | | | +--Variovorax sp. Root473 (1) | | | | | | | | | | | +--Malikia granosa (1) | | | | | | | | | | | +--Acidovorax sp. MR-S7 (1) | | | | | | | | | +--Sphaerotilus montanus (4) | | | | | | | +--Rhodocyclales (4) | | | | | | | | | +--Rhodocyclaceae (4) | | | | | | | | | +--Thauera sp. 27 (1) | | | | | | | | | +--Rhodocyclus tenuis (1) | | | | | | | | | +--Zoogloea ramigera (1) | | | | | | | | | +--Dechloromonas denitrificans (1) | | | | | | | +--Neisseriales (57) | | | | | | | | | +--Chromobacteriaceae (19) | | | | | | | | | | | +--Vogesella sp. EB (2) | | | | | | | | | | | +--Chromobacteriumgroup (16) | | | | | | | | | | | | | +--Chromobacterium sp. LK11 (16) | | | | | | | | | | | +--Andreprevotia (1) | | | | | | | | | | | +--Andreprevotia lacus DSM 23236 (1) | | | | | | | | | +--Neisseriaceae (38) | | | | | | | | | +--Formivibrio citricus (1) | | | | | | | | | +--Pseudogulbenkiania sp. NH8B (1) | | | | | | | | | +--Simonsiella muelleri ATCC 29453 (2) | | | | | | | | | +--Neisseria animalis (1) | | | | | | | | | +--Alysiella crassa (3) | | | | | | | | | +--Vitreoscilla sp. C1 (1) | | | | | | | | | +--Crenobacter luteus (1) | | | | | | | | | +--Conchiformibius steedae (2) | | | | | | | | | +--Silvimonas terrae (4) | | | | | | | | | +--Jeongeupia sp. HS-3 (1) | | | | | | | | | +--Neisseria sicca (1) | | | | | | | | | +--Conchiformibius kuhniae (1) | | | | | | | | | +--Neisseria sp. 10023 (1) | | | | | | | | | +--Bergeriella denitrificans (2) | | | | | | | | | +--Neisseria dentiae (1) | | | | | | | | | +--Laribacter hongkongensis HLHK9 (7) | | | | | | | | | +--Vitreoscilla filiformis (1) | | | | | | | | | +--Neisseria arctica (1) | | | | | | | | | +--Snodgrassella alvi (2) | | | | | | | | | +--Chromobacterium violaceum ATCC 12472 (3) | | | | | | | | | +--Kingella potus (1) | | | | | | | +--Nitrosomonadales (12) | | | | | | | +--Nitrosomonadaceae (12) | | | | | | | +--Nitrosospira sp. Nsp1 (1) | | | | | | | +--Nitrosospira multiformis ATCC 25196 (1) | | | | | | | +--Nitrosomonas sp. Nm58 (1) | | | | | | | +--Nitrosomonas communis (3) | | | | | | | +--Nitrosospira sp. Nl5 (1) | | | | | | | +--Nitrosovibrio tenuis (1) | | | | | | | +--Nitrosomonas nitrosa (1) | | | | | | | +--Nitrosomonas oligotropha (1) | | | | | | | +--Nitrosomonas sp. Nm51 (1) | | | | | | | +--Nitrosomonas aestuarii (1) | | | | | +--delta proteobacterium NaphS2 (6) | | | | | +--gamma proteobacterium BW-2 (1) | | | | | +--gamma proteobacterium HTCC5015 (1) | | | | | +--gamma proteobacterium TUD-JY37 (1) | | | +--FCBgroup (2) | | | | | +--CandidatusLatescibacterota (2) | | | | | +--Latescibacterota bacterium (2) | | | +--Firmicutes (4) | | | | | +--Lactobacillales (4) | | | | | +--Carnobacteriaceae (4) | | | | | +--Agitococcus lubricus (4) | | | +--Pseudomonadota (605) | | | +--Alphaproteobacteria (8) | | | | | +--Hyphomicrobiales (3) | | | | | | | +--Rhodobiaceae (1) | | | | | | | | | +--Rhodobiaceae bacterium (1) | | | | | | | +--Stappiaceae (1) | | | | | | | | | +--Stappia albiluteola (1) | | | | | | | +--Chelatococcaceae (1) | | | | | | | +--Chelatococcus composti (1) | | | | | +--Emcibacterales (1) | | | | | | | +--Emcibacteraceae (1) | | | | | | | +--Paremcibacter congregatus (1) | | | | | +--Sphingomonadales (1) | | | | | | | +--Sphingomonadaceae (1) | | | | | | | +--Novosphingobium silvae (1) | | | | | +--Rhodobacterales (3) | | | | | +--Paracoccaceae (3) | | | | | +--Albimonas pacifica (2) | | | | | +--Puniceibacterium antarcticum (1) | | | +--Proteobacteria bacterium 228 (1) | | | +--Gammaproteobacteria (401) | | | | | +--Pasteurellales (8) | | | | | | | +--Pasteurellaceae (8) | | | | | | | +--Cricetibacter osteomyelitidis (1) | | | | | | | +--Vespertiliibacter pulmonis (1) | | | | | | | +--Rodentibacter trehalosifermentans (4) | | | | | | | +--Mannheimia (2) | | | | | | | +--Mannheimia varigena USDA-ARS-USMARC-1296 (2) | | | | | +--Enterobacterales (115) | | | | | | | +--Yersiniaceae (5) | | | | | | | | | +--Rouxiella badensis (1) | | | | | | | | | +--Chimaeribacter arupi (1) | | | | | | | | | +--Candidatus Fukatsuia symbiotica (3) | | | | | | | +--Pectobacteriaceae (7) | | | | | | | | | +--Affinibrenneria salicis (4) | | | | | | | | | +--Acerihabitans arboris (3) | | | | | | | +--Morganellaceae (38) | | | | | | | | | +--Proteus (1) | | | | | | | | | | | +--Proteus myxofaciens ATCC 19692 (1) | | | | | | | | | +--Arsenophonus (37) | | | | | | | | | +--Arsenophonus endosymbiont of Aphis craccivora (2) | | | | | | | | | +--Arsenophonus sp. ENCA (25) | | | | | | | | | +--unclassifiedArsenophonus (1) | | | | | | | | | | | +--Arsenophonus endosymbiont of Bemisia tabaci Q2 (1) | | | | | | | | | +--Arsenophonus endosymbiont of Aleurodicus floccissimus (9) | | | | | | | +--Enterobacteriaceae (38) | | | | | | | | | +--Jejubacter calystegiae (1) | | | | | | | | | +--Kosakonia (2) | | | | | | | | | | | +--Kosakonia cowanii JCM 10956 = DSM 18146 (2) | | | | | | | | | +--Kluyvera genomosp. 3 (2) | | | | | | | | | +--Enterobacteriaceae bacterium RIT714 (3) | | | | | | | | | +--Klebsiella/Raoultellagroup (6) | | | | | | | | | | | +--Klebsiella indica (3) | | | | | | | | | | | +--Klebsiella (3) | | | | | | | | | | | +--Klebsiellapneumoniae (3) | | | | | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae (strain HS11286) (3) | | | | | | | | | +--Enterobacteriaceaeincertaesedis (21) | | | | | | | | | | | +--ant,tsetse,mealybug,aphid,etc.endosymbionts (21) | | | | | | | | | | | +--Symbiopectobacterium (21) | | | | | | | | | | | +--Candidatus Symbiopectobacterium sp. Dall1.0 (16) | | | | | | | | | | | +--Candidatus Symbiopectobacterium sp. PLON1 (3) | | | | | | | | | | | +--Candidatus Symbiopectobacterium sp. Clec_Harlan (2) | | | | | | | | | +--Tenebrionibacter/Tenebrionicolagroup (3) | | | | | | | | | +--Tenebrionibacter intestinalis (3) | | | | | | | +--Budviciaceae (5) | | | | | | | | | +--Limnobaculum parvum (5) | | | | | | | +--Erwiniaceae (9) | | | | | | | | | +--Izhakiella capsodis (3) | | | | | | | | | +--Pantoea alhagi (1) | | | | | | | | | +--Erwinia sorbitola (1) | | | | | | | | | +--Erwinia (2) | | | | | | | | | | | +--Erwinia sp. 198 (1) | | | | | | | | | | | +--Erwinia sp. OLSSP12 (1) | | | | | | | | | +--Pantoea (2) | | | | | | | | | +--Pantoea sp. M_5 (2) | | | | | | | +--Hafniaceae (1) | | | | | | | | | +--Enterobacillus tribolii (1) | | | | | | | +--Bruguierivoracaceae (12) | | | | | | | +--Sodalis ligni (12) | | | | | +--Orbales (4) | | | | | | | +--Orbaceae (4) | | | | | | | +--Zophobihabitans entericus (4) | | | | | +--Moraxellales (8) | | | | | | | +--Moraxellaceae (8) | | | | | | | +--Acinetobacter defluvii (3) | | | | | | | +--Moraxellaceae bacterium (4) | | | | | | | +--Acinetobacter (1) | | | | | | | +--Acinetobacter indicus CIP 110367 (1) | | | | | +--Methylococcales (15) | | | | | | | +--Methylococcaceae (15) | | | | | | | +--Methylomonas paludis (2) | | | | | | | +--Methyloprofundus (1) | | | | | | | | | +--Methyloprofundus sp. (1) | | | | | | | +--Methylomonas (2) | | | | | | | | | +--Methylomonas sp. LL1 (2) | | | | | | | +--Candidatus Methylospira mobilis (4) | | | | | | | +--Methylococcus (3) | | | | | | | | | +--Methylococcus sp. EFPC2 (3) | | | | | | | +--Methylovulum psychrotolerans (3) | | | | | +--Alteromonadales (3) | | | | | | | +--Alteromonadaceae (3) | | | | | | | +--Alteromonadaceae bacterium M269 (1) | | | | | | | +--Opacimonas viscosa (2) | | | | | +--Vibrionales (49) | | | | | | | +--Vibrionaceae (49) | | | | | | | +--Veronia nyctiphanis (1) | | | | | | | +--Vibrio agarilyticus (1) | | | | | | | +--Candidatus Enterovibrio escacola (1) | | | | | | | +--Vibrio (46) | | | | | | | +--Vibrio sp. 99-8-1 (23) | | | | | | | +--Vibrio sp. HA2012 (4) | | | | | | | +--Vibrio ruber DSM 16370 (19) | | | | | +--Salinisphaerales (1) | | | | | | | +--Salinisphaeraceae (1) | | | | | | | +--Salinisphaera (1) | | | | | | | +--Salinisphaera japonica YTM-1 (1) | | | | | +--Gammaproteobacteriaincertaesedis (17) | | | | | | | +--Kentron (17) | | | | | | | +--Candidatus Kentron sp. G (17) | | | | | +--Cellvibrionales (12) | | | | | | | +--Microbulbiferaceae (1) | | | | | | | | | +--Microbulbifer (1) | | | | | | | | | +--Microbulbifer sp. THAF38 (1) | | | | | | | +--Cellvibrionaceae (8) | | | | | | | | | +--Cellvibrio (5) | | | | | | | | | | | +--Cellvibrio sp. PSBB023 (2) | | | | | | | | | | | +--Cellvibrio sp. KY-GH-1 (3) | | | | | | | | | +--Marinibactrum halimedae (3) | | | | | | | +--Halieaceae (1) | | | | | | | | | +--Kineobactrum sediminis (1) | | | | | | | +--Spongiibacteraceae (2) | | | | | | | +--unclassifiedSpongiibacteraceae (2) | | | | | | | +--BD1-7 clade bacterium (2) | | | | | +--Gammaproteobacteria bacterium ESL0073 (12) | | | | | +--Xanthomonadales (40) | | | | | | | +--Rhodanobacteraceae (17) | | | | | | | | | +--Luteibacter (12) | | | | | | | | | | | +--Luteibacter sp. Sphag1AF (12) | | | | | | | | | +--Dyella (2) | | | | | | | | | | | +--Dyella sp. OK004 (1) | | | | | | | | | | | +--Dyella sp. M7H15-1 (1) | | | | | | | | | +--Dyella tabacisoli (3) | | | | | | | +--Xanthomonadaceae (23) | | | | | | | +--Xanthomonadaceae bacterium NML03-0222 (1) | | | | | | | +--Stenotrophomonas tumulicola (20) | | | | | | | +--Pseudoxanthomonas winnipegensis (2) | | | | | +--Chromatiales (3) | | | | | | | +--Chromatiaceae (3) | | | | | | | +--Thiospirillum jenense (3) | | | | | +--Oceanospirillales (17) | | | | | | | +--Halomonadaceae (5) | | | | | | | | | +--Halomonas salicampi (1) | | | | | | | | | +--Halomonas nanhaiensis (2) | | | | | | | | | +--Larsenimonas rhizosphaerae (1) | | | | | | | | | +--Halomonas (1) | | | | | | | | | +--Halomonas sp. GFAJ-1 (1) | | | | | | | +--Oceanospirillaceae (11) | | | | | | | | | +--Oceanospirillum sediminis (1) | | | | | | | | | +--Marinospirillum celere (2) | | | | | | | | | +--Litoribrevibacter albus (1) | | | | | | | | | +--Marinomonas transparens (7) | | | | | | | +--Pleioneaceae (1) | | | | | | | +--Aliikangiella marina (1) | | | | | +--Pseudomonadales (97) | | | | | +--Pseudomonadaceae (97) | | | | | +--Thiopseudomonas denitrificans (1) | | | | | +--Pseudomonas kuykendallii (3) | | | | | +--Halopseudomonas phragmitis (1) | | | | | +--Pseudomonas pharmacofabricae (1) | | | | | +--Pseudomonas (72) | | | | | | | +--Pseudomonas sp. URIL14HWK12:I9 (1) | | | | | | | +--Pseudomonas sp. HLS-6 (16) | | | | | | | +--Pseudomonas sp. ABC1 (1) | | | | | | | +--Pseudomonas sp. TAD18 (1) | | | | | | | +--Pseudomonas sp. MRSN 12121 (12) | | | | | | | +--Pseudomonas sp. Boi14 (9) | | | | | | | +--Pseudomonas sp. 1239 (8) | | | | | | | +--Pseudomonas sp. HAR-UPW-AIA-41 (1) | | | | | | | +--Pseudomonas sp. v388 (2) | | | | | | | +--Pseudomonas sp. THAF187a (3) | | | | | | | +--Pseudomonas sp. 8AS (1) | | | | | | | +--Pseudomonas sp. SDI (10) | | | | | | | +--Pseudomonas sp. GV071 (7) | | | | | +--Entomomonas asaccharolytica (15) | | | | | +--Pseudomonas carbonaria (1) | | | | | +--Azotobactergroup (2) | | | | | | | +--Azotobacter (2) | | | | | | | +--Azotobacter chroococcum NCIMB 8003 (2) | | | | | +--Pseudomonas cavernae (1) | | | +--Betaproteobacteria (195) | | | +--Burkholderiales (155) | | | | | +--Alcaligenaceae (1) | | | | | | | +--Alcaligenaceae bacterium (1) | | | | | +--Burkholderialesgeneraincertaesedis (14) | | | | | | | +--Thiomonas (2) | | | | | | | | | +--Thiomonas sp. X19 (2) | | | | | | | +--Xylophilus rhododendri (11) | | | | | | | +--Aquariibacter albus (1) | | | | | +--Burkholderiaceae (49) | | | | | | | +--Paraburkholderia lacunae (1) | | | | | | | +--Quisquiliibacterium transsilvanicum (1) | | | | | | | +--Pandoraea terrae (24) | | | | | | | +--Paraburkholderia caffeinitolerans (1) | | | | | | | +--Paraburkholderia eburnea (1) | | | | | | | +--Zeimonas arvi (1) | | | | | | | +--Paraburkholderia acidisoli (1) | | | | | | | +--Mycoavidus cysteinexigens (2) | | | | | | | +--Cupriavidus (2) | | | | | | | | | +--Cupriavidus sp. YR651 (2) | | | | | | | +--Paraburkholderia ultramafica (1) | | | | | | | +--Paraburkholderia (2) | | | | | | | | | +--Paraburkholderia sp. BL23I1N1 (1) | | | | | | | | | +--Paraburkholderia sp. DHOC27 (1) | | | | | | | +--Caballeronia (1) | | | | | | | | | +--Caballeronia sp. SBC1 (1) | | | | | | | +--Paraburkholderia fynbosensis (4) | | | | | | | +--Paraburkholderia steynii (1) | | | | | | | +--Cupriavidus yeoncheonensis (2) | | | | | | | +--Paraburkholderia tagetis (1) | | | | | | | +--Pararobbsia silviterrae (1) | | | | | | | +--Chitinasiproducens palmae (1) | | | | | | | +--Paraburkholderia acidiphila (1) | | | | | +--Sphaerotilaceae (2) | | | | | | | +--Ideonella livida (1) | | | | | | | +--Roseateles (1) | | | | | | | +--Mitsuaria sp. WAJ17 (1) | | | | | +--Comamonadaceae (44) | | | | | | | +--Comamonas suwonensis (2) | | | | | | | +--Hydrogenophaga (15) | | | | | | | | | +--Hydrogenophaga sp. BPS33 (15) | | | | | | | +--Variovorax (14) | | | | | | | | | +--Variovorax sp. OV329 (1) | | | | | | | | | +--Variovorax sp. Sphag1AA (13) | | | | | | | +--Acidovorax (1) | | | | | | | | | +--Acidovorax sp. (1) | | | | | | | +--Variovorax gossypii (5) | | | | | | | +--Comamonas (5) | | | | | | | | | +--Comamonas sp. 26 (2) | | | | | | | | | +--Comamonas sp. BIGb0124 (2) | | | | | | | | | +--Comamonas sp. JNW (1) | | | | | | | +--Curvibacter (1) | | | | | | | | | +--Curvibacter sp. AEP1-3 (1) | | | | | | | +--Comamonas antarctica (1) | | | | | +--Oxalobacteraceae (45) | | | | | +--Undibacterium luofuense (1) | | | | | +--Telluriagroup (4) | | | | | | | +--Massilia eurypsychrophila (1) | | | | | | | +--Massilia horti (1) | | | | | | | +--Duganella fentianensis (1) | | | | | | | +--Duganella (1) | | | | | | | +--Duganella sp. CF517 (1) | | | | | +--Herbaspirillum (25) | | | | | | | +--Herbaspirillum sp. Sphag64 (24) | | | | | | | +--Herbaspirillum sp. meg3 (1) | | | | | +--Glaciimonas soli (2) | | | | | +--Glaciimonas (1) | | | | | | | +--Glaciimonas sp. PCH181 (1) | | | | | +--Undibacterium piscinae (1) | | | | | +--Undibacterium terreum (1) | | | | | +--Undibacterium jejuense (2) | | | | | +--Solimicrobium silvestre (6) | | | | | +--Noviherbaspirillum galbum (2) | | | +--Rhodocyclales (15) | | | | | +--Fluviibacteraceae (1) | | | | | | | +--Fluviibacter phosphoraccumulans (1) | | | | | +--Zoogloeaceae (14) | | | | | +--Pseudothauera nasutitermitis (2) | | | | | +--Parazoarcus (1) | | | | | | | +--Parazoarcus communis SWub3 = DSM 12120 (1) | | | | | +--Thauera propionica (1) | | | | | +--Thauera (3) | | | | | | | +--Thauera aromatica K172 (2) | | | | | | | +--Thauera sp. K11 (1) | | | | | +--Pseudothauera lacus (1) | | | | | +--Pseudothauera rhizosphaerae (1) | | | | | +--Zoogloea dura (1) | | | | | +--Zoogloea oleivorans (4) | | | +--Neisseriales (22) | | | | | +--Chromobacteriaceae (8) | | | | | | | +--Paludibacterium purpuratum (4) | | | | | | | +--Aquitalea (2) | | | | | | | | | +--Aquitalea sp. FJL05 (2) | | | | | | | +--Paludibacterium denitrificans (2) | | | | | +--Neisseriaceae (6) | | | | | | | +--Eikenella (1) | | | | | | | | | +--Eikenella corrodens CC92I (1) | | | | | | | +--Paralysiella testudinis (1) | | | | | | | +--Alysiella (1) | | | | | | | | | +--Alysiella filiformis DSM 16848 (1) | | | | | | | +--Craterilacuibacter sinensis (2) | | | | | | | +--Neisseria (1) | | | | | | | +--Neisseria sp. 51.81 (1) | | | | | +--Chitinibacteraceae (8) | | | | | +--Chitinibacter fontanus (1) | | | | | +--Chitinimonas (1) | | | | | | | +--Chitinimonas sp. BJB300 (1) | | | | | +--Iodobacter ciconiae (1) | | | | | +--Deefgea piscis (1) | | | | | +--Chitiniphilus eburneus (4) | | | +--Nitrosomonadales (3) | | | +--Methylophilaceae (1) | | | | | +--Methylophilaceae bacterium (1) | | | +--Nitrosomonadaceae (1) | | | | | +--Nitrosomonas (1) | | | | | +--Nitrosomonas sp. Nm166 (1) | | | +--Thiobacillaceae (1) | | | +--Sulfuritortus calidifontis (1) | +--Viruses (104) | | | +--Enterobacteria phage YYZ-2008 (1) | | | +--Duplodnaviria (72) | | | | | +--Heunggongvirae (72) | | | | | +--Uroviricota (72) | | | | | +--Caudoviricetes (72) | | | | | +--Bordetella phage vB_BaM-IFTN9 (1) | | | | | +--Enterobacteria phage PPyecE_EH1910 (2) | | | | | +--Escherichia phage ASU11 (1) | | | | | +--Bordetella phage vB_BaM-IFTN3 (1) | | | | | +--Punavirus (6) | | | | | | | +--Escherichia phage JL22 (2) | | | | | | | +--Escherichia phage vB_EcoM-Ro157c2YLVW (2) | | | | | | | +--Escherichia phage RCS47 (2) | | | | | +--Aeromonas phage phiARM81ld (1) | | | | | +--Stx2a-converting phage Stx2_EH1910 (1) | | | | | +--Sawaravirus (1) | | | | | | | +--Stx2-converting phage Stx2a_WGPS2 (1) | | | | | +--Klebsiella phage 48ST307 (1) | | | | | +--Uetakevirus (3) | | | | | | | +--Escherichia phage phiv142-3 (1) | | | | | | | +--Escherichia coli O157 typing phage 10 (1) | | | | | | | +--Escherichia phage vB_EcoP_ZX5 (1) | | | | | +--Stx2a-converting phage Stx2_EH2201 (1) | | | | | +--Escherichia phage D6 (2) | | | | | +--Klebsiella phage ST11-OXA245phi3.2 (1) | | | | | +--Escherichia phage Lys8385Vzw (1) | | | | | +--Salmonella phage F1055 (1) | | | | | +--Glaedevirus (2) | | | | | | | +--Escherichia phage phiSTEC1575-Stx2k (1) | | | | | | | +--Escherichia phage 2H10 (1) | | | | | +--Bordetella phage vB_BaM-IFTN4 (1) | | | | | +--Moraxella phage Mcat4 (1) | | | | | +--Peduoviridae (3) | | | | | | | +--Xuanwuvirus P884B11 (1) | | | | | | | +--Escherichia phage vB_EcoM-705R2 (1) | | | | | | | +--Aeromonas phage vB_AsaM_LPM4 (1) | | | | | +--Stx2a-converting phage Stx2_95 (1) | | | | | +--Bacillus phage vB_BspP_Dartukuta (1) | | | | | +--Marienburgvirus (1) | | | | | | | +--Escherichia phage JLK-2012 (1) | | | | | +--Escherichia phage Ayreon (1) | | | | | +--Pankowvirus (1) | | | | | | | +--Stx2-converting phage Stx2a_WGPS6 (1) | | | | | +--Hafnia phage vB_HpaM_Meifeng (1) | | | | | +--Pseudomonas phage YMC11/07/P54_PAE_BP (1) | | | | | +--Klebsiella phage ST512-KPC3phi13.3 (1) | | | | | +--Stx1a-converting phage Stx1_EH1992 (1) | | | | | +--Acinetobacter phage MD-2021a (21) | | | | | +--Ravinvirus (2) | | | | | | | +--Escherichia phage YDC107_1 (2) | | | | | +--Stx2a-converting phage Stx2_EH2246 (1) | | | | | +--Sepvirinae (8) | | | | | +--Traversvirus (2) | | | | | | | +--Stx2-converting phage Stx2a_F723 (1) | | | | | | | +--Escherichia phage PA28 (1) | | | | | +--Oslovirus (6) | | | | | +--Escherichia phage PA2 (2) | | | | | +--Escherichia phage Lyz12581Vzw (1) | | | | | +--Escherichia phage GER2 (2) | | | | | +--Escherichia phage P13771 (1) | | | +--Salmonella phage 118970_sal3 (2) | | | +--Bacteriophage APSE-3 (1) | | | +--dsDNAviruses,noRNAstage (27) | | | | | +--Salmonella phage ST64B (1) | | | | | +--Caudovirales (26) | | | | | +--Bacteriophage APSE-2 (1) | | | | | +--Endosymbiont phage APSE-1 (1) | | | | | +--Myoviridae (5) | | | | | | | +--Rhizobium phage RR1-A (1) | | | | | | | +--P1virus (1) | | | | | | | | | +--Salmonella phage SJ46 (1) | | | | | | | +--Enterobacteria phage P88 (1) | | | | | | | +--Peduovirinae (1) | | | | | | | | | +--Enterobacteria phage P4 (1) | | | | | | | +--Enterobacteria phage P1 (1) | | | | | +--Klebsiella phage phiKO2 (1) | | | | | +--Pseudomonas phage PAJU2 (1) | | | | | +--Enterobacteria phage VT2-Sakai (1) | | | | | +--Enterobacteria phage 2851 (1) | | | | | +--Enterobacteria phage SfV (1) | | | | | +--Siphoviridae (6) | | | | | | | +--Lambdavirus (1) | | | | | | | | | +--Enterobacteria phage mEp460 (1) | | | | | | | +--Enterobacteria phage N15 (1) | | | | | | | +--Lambda-likeviruses (3) | | | | | | | | | +--Enterobacteria phage cdtI (1) | | | | | | | | | +--Stx2 converting phage II (1) | | | | | | | | | +--Stx2-converting phage 1717 (1) | | | | | | | +--Pseudomonas phage YMC11/02/R656 (1) | | | | | +--Haemophilus phage Aaphi23 (1) | | | | | +--Enterobacteria phage phiP27 (1) | | | | | +--Yersinia phage PY54 (1) | | | | | +--Podoviridae (5) | | | | | +--Sepvirinae (3) | | | | | | | +--Tl2011virus (2) | | | | | | | | | +--Escherichia phage TL-2011c (1) | | | | | | | | | +--Escherichia phage phi191 (1) | | | | | | | +--Nona33virus (1) | | | | | | | +--Escherichia phage vB_EcoP_24B (1) | | | | | +--Epsilon15virus (1) | | | | | | | +--Escherichia phage TL-2011b (1) | | | | | +--Enterobacter phage Tyrion (1) | | | +--Escherichia phage 1720a-02 (1) | +--Plautia stali symbiont (4)