# Species tree for RF01518 # Generated from Rfam version 15.00 | +--Eukaryota (353) | | | +--Alveolata (3) | | | | | +--Apicomplexa (3) | | | | | +--Aconoidasida (2) | | | | | | | +--Haemosporida (2) | | | | | | | +--Plasmodiidae (1) | | | | | | | | | +--Plasmodium (1) | | | | | | | | | +--Plasmodium(Plasmodium) (1) | | | | | | | | | +--Plasmodium vivax Sal-1 (1) | | | | | | | +--Plasmodium (1) | | | | | | | +--Plasmodium ovale wallikeri (1) | | | | | +--Coccidia (1) | | | | | +--Eucoccidiorida (1) | | | | | +--Eimeriorina (1) | | | | | +--Sarcocystidae (1) | | | | | +--Toxoplasma gondii VEG (1) | | | +--Metazoa (320) | | | | | +--Nematoda (3) | | | | | | | +--Enoplea (3) | | | | | | | +--Trichocephalida (3) | | | | | | | +--Trichinellidae (3) | | | | | | | +--Trichinella britovi (1) | | | | | | | +--Trichinella zimbabwensis (1) | | | | | | | +--Trichinella sp. T9 (1) | | | | | +--Chordata (317) | | | | | +--Craniata (317) | | | | | +--Vertebrata (317) | | | | | +--Euteleostomi (316) | | | | | | | +--Lepidosauria (2) | | | | | | | | | +--Sphenodontia (2) | | | | | | | | | +--Sphenodontidae (2) | | | | | | | | | +--Sphenodon punctatus (tuatara) (2) | | | | | | | +--Coelacanthiformes (1) | | | | | | | | | +--Coelacanthidae (1) | | | | | | | | | +--Latimeria chalumnae (coelacanth) (1) | | | | | | | +--Amphibia (1) | | | | | | | | | +--Batrachia (1) | | | | | | | | | +--Anura (1) | | | | | | | | | +--Neobatrachia (1) | | | | | | | | | +--Ranoidea (1) | | | | | | | | | +--Ranidae (1) | | | | | | | | | +--Raninae (1) | | | | | | | | | +--Rana (1) | | | | | | | | | +--Rana catesbeiana (bullfrog) (1) | | | | | | | +--Mammalia (288) | | | | | | | | | +--Metatheria (1) | | | | | | | | | | | +--Dasyuromorphia (1) | | | | | | | | | | | +--Dasyuridae (1) | | | | | | | | | | | +--Sarcophilus harrisii (Tasmanian devil) (1) | | | | | | | | | +--Eutheria (287) | | | | | | | | | +--Euarchontoglires (167) | | | | | | | | | | | +--Primates (113) | | | | | | | | | | | | | +--Haplorrhini (108) | | | | | | | | | | | | | | | +--Catarrhini (95) | | | | | | | | | | | | | | | | | +--Hominidae (41) | | | | | | | | | | | | | | | | | | | +--Pongo abelii (Sumatran orangutan) (3) | | | | | | | | | | | | | | | | | | | +--Pan paniscus (pygmy chimpanzee) (3) | | | | | | | | | | | | | | | | | | | +--Homo sapiens (human) (15) | | | | | | | | | | | | | | | | | | | +--Gorilla gorilla gorilla (western lowland gorilla) (4) | | | | | | | | | | | | | | | | | | | +--Pan troglodytes (chimpanzee) (16) | | | | | | | | | | | | | | | | | +--Hylobatidae (3) | | | | | | | | | | | | | | | | | | | +--Nomascus leucogenys (Northern white-cheeked gibbon) (3) | | | | | | | | | | | | | | | | | +--Cercopithecidae (51) | | | | | | | | | | | | | | | | | +--Cercopithecinae (44) | | | | | | | | | | | | | | | | | | | +--Chlorocebus sabaeus (3) | | | | | | | | | | | | | | | | | | | +--Papio anubis (Olive baboon) (4) | | | | | | | | | | | | | | | | | | | +--Macaca fascicularis (crab-eating macaque) (18) | | | | | | | | | | | | | | | | | | | +--Mandrillus leucophaeus (drill) (4) | | | | | | | | | | | | | | | | | | | +--Macaca mulatta (Rhesus monkey) (2) | | | | | | | | | | | | | | | | | | | +--Theropithecus gelada (gelada baboon) (8) | | | | | | | | | | | | | | | | | | | +--Cercocebus atys (sooty mangabey) (3) | | | | | | | | | | | | | | | | | | | +--Macaca nemestrina (pig-tailed macaque) (2) | | | | | | | | | | | | | | | | | +--Colobinae (7) | | | | | | | | | | | | | | | | | +--Rhinopithecus bieti (Black snub-nosed monkey) (2) | | | | | | | | | | | | | | | | | +--Piliocolobus tephrosceles (Ugandan red Colobus) (2) | | | | | | | | | | | | | | | | | +--Rhinopithecus roxellana (golden snub-nosed monkey) (3) | | | | | | | | | | | | | | | +--Platyrrhini (13) | | | | | | | | | | | | | | | +--Aotidae (1) | | | | | | | | | | | | | | | | | +--Aotus nancymaae (Ma's night monkey) (1) | | | | | | | | | | | | | | | +--Cebidae (12) | | | | | | | | | | | | | | | +--Callitrichinae (10) | | | | | | | | | | | | | | | | | +--Callithrix jacchus (white-tufted-ear marmoset) (10) | | | | | | | | | | | | | | | +--Cebinae (2) | | | | | | | | | | | | | | | +--Cebus apella (Tufted capuchin) (2) | | | | | | | | | | | | | +--Strepsirrhini (5) | | | | | | | | | | | | | +--Lemuriformes (5) | | | | | | | | | | | | | +--Indriidae (5) | | | | | | | | | | | | | +--Propithecus coquereli (Coquerel's sifaka) (5) | | | | | | | | | | | +--Scandentia (1) | | | | | | | | | | | | | +--Tupaiidae (1) | | | | | | | | | | | | | +--Tupaia chinensis (Chinese tree shrew) (1) | | | | | | | | | | | +--Glires (53) | | | | | | | | | | | +--Rodentia (49) | | | | | | | | | | | | | +--Hystricognathi (2) | | | | | | | | | | | | | | | +--Bathyergidae (2) | | | | | | | | | | | | | | | +--Heterocephalus glaber (naked mole-rat) (2) | | | | | | | | | | | | | +--Sciurognathi (47) | | | | | | | | | | | | | +--Sciuridae (2) | | | | | | | | | | | | | | | +--Sciurinae (2) | | | | | | | | | | | | | | | +--Sciurini (2) | | | | | | | | | | | | | | | +--Sciurus carolinensis (gray squirrel) (1) | | | | | | | | | | | | | | | +--Sciurus vulgaris (Eurasian red squirrel) (1) | | | | | | | | | | | | | +--Muroidea (24) | | | | | | | | | | | | | | | +--Spalacidae (2) | | | | | | | | | | | | | | | | | +--Spalacinae (2) | | | | | | | | | | | | | | | | | +--Nannospalax galili (Upper Galilee mountains blind mole rat) (2) | | | | | | | | | | | | | | | +--Muridae (12) | | | | | | | | | | | | | | | | | +--Murinae (12) | | | | | | | | | | | | | | | | | +--Rattus norvegicus (Norway rat) (8) | | | | | | | | | | | | | | | | | +--Mus (4) | | | | | | | | | | | | | | | | | +--Mus spicilegus (steppe mouse) (2) | | | | | | | | | | | | | | | | | +--Mus musculus (house mouse) (2) | | | | | | | | | | | | | | | +--Cricetidae (10) | | | | | | | | | | | | | | | +--Arvicolinae (9) | | | | | | | | | | | | | | | | | +--Microtus ochrogaster (prairie vole) (9) | | | | | | | | | | | | | | | +--Neotominae (1) | | | | | | | | | | | | | | | +--Peromyscus maniculatus bairdii (prairie deer mouse) (1) | | | | | | | | | | | | | +--Heteromyidae (16) | | | | | | | | | | | | | | | +--Dipodomyinae (16) | | | | | | | | | | | | | | | +--Dipodomys ordii (Ord's kangaroo rat) (16) | | | | | | | | | | | | | +--Castoridae (5) | | | | | | | | | | | | | +--Castor canadensis (American beaver) (5) | | | | | | | | | | | +--Lagomorpha (4) | | | | | | | | | | | +--Leporidae (4) | | | | | | | | | | | +--Oryctolagus cuniculus (rabbit) (4) | | | | | | | | | +--Laurasiatheria (120) | | | | | | | | | +--Carnivora (45) | | | | | | | | | | | +--Feliformia (6) | | | | | | | | | | | | | +--Hyaenidae (1) | | | | | | | | | | | | | | | +--Crocuta crocuta (spotted hyena) (1) | | | | | | | | | | | | | +--Felidae (5) | | | | | | | | | | | | | +--Felinae (2) | | | | | | | | | | | | | | | +--Felis catus (domestic cat) (2) | | | | | | | | | | | | | +--Acinonychinae (3) | | | | | | | | | | | | | +--Acinonyx jubatus (cheetah) (3) | | | | | | | | | | | +--Caniformia (39) | | | | | | | | | | | +--Otariidae (1) | | | | | | | | | | | | | +--Callorhinus ursinus (northern fur seal) (1) | | | | | | | | | | | +--Phocidae (4) | | | | | | | | | | | | | +--Monachus schauinslandi (Hawaiian monk seal) (3) | | | | | | | | | | | | | +--Leptonychotes weddellii (Weddell seal) (1) | | | | | | | | | | | +--Mustelidae (13) | | | | | | | | | | | | | +--Martinae (2) | | | | | | | | | | | | | | | +--Gulo gulo (wolverine) (2) | | | | | | | | | | | | | +--Mustelinae (11) | | | | | | | | | | | | | +--Mustela putorius furo (domestic ferret) (11) | | | | | | | | | | | +--Ursidae (4) | | | | | | | | | | | | | +--Ursus americanus (American black bear) (2) | | | | | | | | | | | | | +--Ursus maritimus (polar bear) (2) | | | | | | | | | | | +--Canidae (16) | | | | | | | | | | | | | +--Canis lupus dingo (dingo) (7) | | | | | | | | | | | | | +--Vulpes vulpes (red fox) (3) | | | | | | | | | | | | | +--Nyctereutes procyonoides (raccoon dog) (4) | | | | | | | | | | | | | +--Canis lupus familiaris (dog) (2) | | | | | | | | | | | +--Odobenidae (1) | | | | | | | | | | | +--Odobenus rosmarus divergens (Pacific walrus) (1) | | | | | | | | | +--Cetartiodactyla (56) | | | | | | | | | | | +--Tylopoda (8) | | | | | | | | | | | | | +--Camelidae (8) | | | | | | | | | | | | | +--Vicugna pacos (alpaca) (2) | | | | | | | | | | | | | +--Camelus dromedarius (Arabian camel) (4) | | | | | | | | | | | | | +--Camelus ferus (Wild Bactrian camel) (1) | | | | | | | | | | | | | +--Camelus bactrianus (Bactrian camel) (1) | | | | | | | | | | | +--Cetacea (14) | | | | | | | | | | | | | +--Odontoceti (13) | | | | | | | | | | | | | | | +--Monodontidae (3) | | | | | | | | | | | | | | | | | +--Monodon monoceros (narwhal) (1) | | | | | | | | | | | | | | | | | +--Delphinapterus leucas (beluga whale) (2) | | | | | | | | | | | | | | | +--Phocoenidae (1) | | | | | | | | | | | | | | | | | +--Phocoena sinus (vaquita) (1) | | | | | | | | | | | | | | | +--Delphinidae (9) | | | | | | | | | | | | | | | +--Sousa chinensis (Indo-pacific humpbacked dolphin) (1) | | | | | | | | | | | | | | | +--Tursiops truncatus (bottlenosed dolphin) (8) | | | | | | | | | | | | | +--Mysticeti (1) | | | | | | | | | | | | | +--Eschrichtiidae (1) | | | | | | | | | | | | | +--Eschrichtius robustus (grey whale) (1) | | | | | | | | | | | +--Ruminantia (27) | | | | | | | | | | | | | +--Pecora (27) | | | | | | | | | | | | | +--Bovidae (19) | | | | | | | | | | | | | | | +--Caprinae (2) | | | | | | | | | | | | | | | | | +--Capra hircus (goat) (2) | | | | | | | | | | | | | | | +--Bovinae (17) | | | | | | | | | | | | | | | +--Bos grunniens (domestic yak) (3) | | | | | | | | | | | | | | | +--Bos indicus (2) | | | | | | | | | | | | | | | +--Bos (8) | | | | | | | | | | | | | | | | | +--Bos indicus x Bos taurus (hybrid cattle) (8) | | | | | | | | | | | | | | | +--Bos taurus (cattle) (3) | | | | | | | | | | | | | | | +--Bos grunniens mutus (1) | | | | | | | | | | | | | +--Moschidae (8) | | | | | | | | | | | | | +--Moschus moschiferus (Siberian musk deer) (8) | | | | | | | | | | | +--Suina (7) | | | | | | | | | | | +--Tayassuidae (4) | | | | | | | | | | | | | +--Catagonus wagneri (Chacoan peccary) (4) | | | | | | | | | | | +--Suidae (3) | | | | | | | | | | | +--Sus scrofa (pig) (3) | | | | | | | | | +--Perissodactyla (10) | | | | | | | | | | | +--Equidae (9) | | | | | | | | | | | | | +--Equus caballus (horse) (8) | | | | | | | | | | | | | +--Equus asinus (ass) (1) | | | | | | | | | | | +--Rhinocerotidae (1) | | | | | | | | | | | +--Diceros bicornis minor (1) | | | | | | | | | +--Chiroptera (9) | | | | | | | | | +--Microchiroptera (5) | | | | | | | | | | | +--Phyllostomidae (4) | | | | | | | | | | | | | +--Phyllostominae (4) | | | | | | | | | | | | | +--Phyllostomus discolor (pale spear-nosed bat) (4) | | | | | | | | | | | +--Vespertilionidae (1) | | | | | | | | | | | +--Pipistrellus kuhlii (Kuhl's pipistrelle) (1) | | | | | | | | | +--Megachiroptera (4) | | | | | | | | | +--Pteropodidae (4) | | | | | | | | | +--Pteropodinae (4) | | | | | | | | | +--Rousettus aegyptiacus (Egyptian rousette) (2) | | | | | | | | | +--Pteropus vampyrus (large flying fox) (1) | | | | | | | | | +--Pteropus alecto (black flying fox) (1) | | | | | | | +--Testudines (4) | | | | | | | | | +--Cryptodira (4) | | | | | | | | | +--Testudinoidea (4) | | | | | | | | | +--Chelydridae (1) | | | | | | | | | | | +--Platysternon megacephalum (big-headed turtle) (1) | | | | | | | | | +--Testudinidae (3) | | | | | | | | | +--Gopherus agassizii (desert tortoise) (3) | | | | | | | +--Archosauria (20) | | | | | | | +--Dinosauria (19) | | | | | | | | | +--Saurischia (19) | | | | | | | | | +--Theropoda (19) | | | | | | | | | +--Coelurosauria (19) | | | | | | | | | +--Aves (19) | | | | | | | | | +--Neognathae (19) | | | | | | | | | +--Passeriformes (7) | | | | | | | | | | | +--Turdidae (1) | | | | | | | | | | | | | +--Catharus fuscescens (1) | | | | | | | | | | | +--Passeroidea (2) | | | | | | | | | | | | | +--Fringillidae (2) | | | | | | | | | | | | | +--Emberizinae (2) | | | | | | | | | | | | | +--Cardinalini (1) | | | | | | | | | | | | | | | +--Cardinalis cardinalis (1) | | | | | | | | | | | | | +--Emberizini (1) | | | | | | | | | | | | | +--Zonotrichia albicollis (1) | | | | | | | | | | | +--Tyrannidae (2) | | | | | | | | | | | | | +--Neopipo cinnamomea (1) | | | | | | | | | | | | | +--Sapayoa aenigma (broad-billed sapayoa) (1) | | | | | | | | | | | +--Timaliidae (2) | | | | | | | | | | | +--Pteruthius melanotis (1) | | | | | | | | | | | +--Pomatostomus ruficeps (chestnut-crowned babbler) (1) | | | | | | | | | +--Ciconiiformes (1) | | | | | | | | | | | +--Ciconiidae (1) | | | | | | | | | | | +--Ciconia maguari (1) | | | | | | | | | +--Procellariiformes (1) | | | | | | | | | | | +--Pelecanoididae (1) | | | | | | | | | | | +--Pelecanoides urinatrix (1) | | | | | | | | | +--Bucerotiformes (1) | | | | | | | | | | | +--Bucerotidae (1) | | | | | | | | | | | +--Buceros rhinoceros silvestris (1) | | | | | | | | | +--Strigiformes (1) | | | | | | | | | | | +--Strigidae (1) | | | | | | | | | | | +--Athene cunicularia (1) | | | | | | | | | +--Galliformes (1) | | | | | | | | | | | +--Phasianidae (1) | | | | | | | | | | | +--Phasianinae (1) | | | | | | | | | | | +--Pavo cristatus (Indian peafowl) (1) | | | | | | | | | +--Charadriiformes (3) | | | | | | | | | | | +--Laridae (2) | | | | | | | | | | | | | +--Rissa tridactyla (black-legged kittiwake) (1) | | | | | | | | | | | | | +--Larus smithsonianus (1) | | | | | | | | | | | +--Glareolidae (1) | | | | | | | | | | | +--Rhinoptilus africanus (double-banded courser) (1) | | | | | | | | | +--Anseriformes (4) | | | | | | | | | +--Anhimidae (1) | | | | | | | | | | | +--Chauna torquata (southern screamer) (1) | | | | | | | | | +--Anatidae (3) | | | | | | | | | +--Anas platyrhynchos (1) | | | | | | | | | +--Anas platyrhynchos platyrhynchos (common mallard) (1) | | | | | | | | | +--Anas zonorhyncha (1) | | | | | | | +--Crocodylidae (1) | | | | | | | +--Alligatorinae (1) | | | | | | | +--Alligator mississippiensis (American alligator) (1) | | | | | +--Chondrichthyes (1) | | | | | +--Elasmobranchii (1) | | | | | +--Galeomorphii (1) | | | | | +--Galeoidea (1) | | | | | +--Carcharhiniformes (1) | | | | | +--Scyliorhinidae (1) | | | | | +--Scyliorhinus torazame (cloudy catshark) (1) | | | +--Viridiplantae (2) | | | | | +--Streptophyta (2) | | | | | +--Embryophyta (2) | | | | | +--Tracheophyta (2) | | | | | +--Spermatophyta (2) | | | | | +--Magnoliophyta (2) | | | | | +--Liliopsida (1) | | | | | | | +--Poales (1) | | | | | | | +--Poaceae (1) | | | | | | | +--PACMADclade (1) | | | | | | | +--Panicoideae (1) | | | | | | | +--Paniceae (1) | | | | | | | +--Panicum virgatum (switchgrass) (1) | | | | | +--eudicotyledons (1) | | | | | +--coreeudicotyledons (1) | | | | | +--asterids (1) | | | | | +--lamiids (1) | | | | | +--Lamiales (1) | | | | | +--Gesneriaceae (1) | | | | | +--Cyrtandroideae (1) | | | | | +--Didymocarpeae (1) | | | | | +--Boea hygrometrica (1) | | | +--Opisthokonta (28) | | | +--Metazoa (27) | | | | | +--Eumetazoa (27) | | | | | +--Bilateria (27) | | | | | +--Deuterostomia (27) | | | | | +--Chordata (27) | | | | | +--Craniata (27) | | | | | +--Vertebrata (27) | | | | | +--Gnathostomata (27) | | | | | +--Teleostomi (27) | | | | | +--Euteleostomi (27) | | | | | +--Sarcopterygii (27) | | | | | +--Dipnotetrapodomorpha (27) | | | | | +--Tetrapoda (27) | | | | | +--Amphibia (1) | | | | | | | +--Gymnophiona (1) | | | | | | | +--Siphonopidae (1) | | | | | | | +--Microcaecilia unicolor (1) | | | | | +--Amniota (26) | | | | | +--Sauropsida (6) | | | | | | | +--Sauria (6) | | | | | | | +--Archelosauria (6) | | | | | | | +--Testudinata (1) | | | | | | | | | +--Testudines (1) | | | | | | | | | +--Cryptodira (1) | | | | | | | | | +--Durocryptodira (1) | | | | | | | | | +--Testudinoidea (1) | | | | | | | | | +--Testudinidae (1) | | | | | | | | | +--Gopherus evgoodei (goodes thornscrub tortoise) (1) | | | | | | | +--Archosauria (5) | | | | | | | +--Dinosauria (5) | | | | | | | +--Saurischia (5) | | | | | | | +--Theropoda (5) | | | | | | | +--Coelurosauria (5) | | | | | | | +--Aves (5) | | | | | | | +--Neognathae (5) | | | | | | | +--Passeriformes (1) | | | | | | | | | +--Passeroidea (1) | | | | | | | | | +--Nectariniidae (1) | | | | | | | | | +--Leptocoma aspasia (1) | | | | | | | +--Galbuliformes (1) | | | | | | | | | +--Galbulidae (1) | | | | | | | | | +--Galbula dea (1) | | | | | | | +--Procellariiformes (1) | | | | | | | | | +--Procellariidae (1) | | | | | | | | | +--Calonectris borealis (cory's shearwater) (1) | | | | | | | +--Gruiformes (2) | | | | | | | +--Rallidae (2) | | | | | | | +--Atlantisia rogersi (inaccessible island rail) (1) | | | | | | | +--Zapornia atra (1) | | | | | +--Mammalia (20) | | | | | +--Theria (20) | | | | | +--Eutheria (20) | | | | | +--Boreoeutheria (20) | | | | | +--Euarchontoglires (3) | | | | | | | +--Primates (3) | | | | | | | +--Haplorrhini (1) | | | | | | | | | +--Tarsiiformes (1) | | | | | | | | | +--Tarsiidae (1) | | | | | | | | | +--Carlito syrichta (Philippine tarsier) (1) | | | | | | | +--Strepsirrhini (2) | | | | | | | +--Lemuriformes (2) | | | | | | | +--Lemuridae (2) | | | | | | | +--Prolemur simus (greater bamboo lemur) (2) | | | | | +--Laurasiatheria (17) | | | | | +--Artiodactyla (17) | | | | | +--Whippomorpha (3) | | | | | | | +--Cetacea (3) | | | | | | | +--Odontoceti (3) | | | | | | | +--Phocoenidae (3) | | | | | | | +--Neophocaena (3) | | | | | | | +--Neophocaena asiaeorientalis asiaeorientalis (yangtze finless porpoise) (3) | | | | | +--Ruminantia (14) | | | | | +--Pecora (14) | | | | | +--Bovidae (14) | | | | | +--Bovinae (14) | | | | | +--Bison (14) | | | | | +--Bison bison bison (north american plains bison) (14) | | | +--Fungi (1) | | | +--Dikarya (1) | | | +--Ascomycota (1) | | | +--saccharomyceta (1) | | | +--Pezizomycotina (1) | | | +--leotiomyceta (1) | | | +--sordariomyceta (1) | | | +--Sordariomycetes (1) | | | +--Hypocreomycetidae (1) | | | +--Hypocreales (1) | | | +--Ophiocordycipitaceae (1) | | | +--Tolypocladium (1) | | | +--Tolypocladium ophioglossoides CBS 100239 (1) | +--Bacteria (1) | +--Actinobacteria (1) | +--Actinobacteridae (1) | +--Actinomycetales (1) | +--Propionibacterineae (1) | +--Nocardioidaceae (1) | +--Nocardioides sp. D94-1 (1)