# Species tree for RF01183 # Generated from Rfam version 15.00 | +--Eukaryota (150) | +--Metazoa (142) | | | +--Chordata (142) | | | +--Craniata (142) | | | +--Vertebrata (142) | | | +--Euteleostomi (142) | | | +--Lepidosauria (1) | | | | | +--Sphenodontia (1) | | | | | +--Sphenodontidae (1) | | | | | +--Sphenodon punctatus (tuatara) (1) | | | +--Mammalia (130) | | | | | +--Monotremata (1) | | | | | | | +--Ornithorhynchidae (1) | | | | | | | +--Ornithorhynchus anatinus (platypus) (1) | | | | | +--Metatheria (4) | | | | | | | +--Dasyuromorphia (1) | | | | | | | | | +--Dasyuridae (1) | | | | | | | | | +--Sarcophilus harrisii (Tasmanian devil) (1) | | | | | | | +--Didelphimorphia (1) | | | | | | | | | +--Didelphidae (1) | | | | | | | | | +--Monodelphis domestica (gray short-tailed opossum) (1) | | | | | | | +--Diprotodontia (2) | | | | | | | +--Vombatidae (1) | | | | | | | | | +--Vombatus ursinus (common wombat) (1) | | | | | | | +--Phascolarctidae (1) | | | | | | | +--Phascolarctos cinereus (koala) (1) | | | | | +--Eutheria (125) | | | | | +--Afrotheria (1) | | | | | | | +--Proboscidea (1) | | | | | | | +--Elephantidae (1) | | | | | | | +--Loxodonta africana (African savanna elephant) (1) | | | | | +--Euarchontoglires (54) | | | | | | | +--Primates (26) | | | | | | | | | +--Haplorrhini (22) | | | | | | | | | | | +--Catarrhini (18) | | | | | | | | | | | | | +--Hominidae (5) | | | | | | | | | | | | | | | +--Pongo abelii (Sumatran orangutan) (1) | | | | | | | | | | | | | | | +--Homo sapiens (human) (1) | | | | | | | | | | | | | | | +--Gorilla gorilla gorilla (western lowland gorilla) (1) | | | | | | | | | | | | | | | +--Pan paniscus (pygmy chimpanzee) (1) | | | | | | | | | | | | | | | +--Pan troglodytes (chimpanzee) (1) | | | | | | | | | | | | | +--Hylobatidae (1) | | | | | | | | | | | | | | | +--Nomascus leucogenys (Northern white-cheeked gibbon) (1) | | | | | | | | | | | | | +--Cercopithecidae (12) | | | | | | | | | | | | | +--Cercopithecinae (8) | | | | | | | | | | | | | | | +--Papio anubis (Olive baboon) (1) | | | | | | | | | | | | | | | +--Theropithecus gelada (gelada baboon) (1) | | | | | | | | | | | | | | | +--Cercocebus atys (sooty mangabey) (1) | | | | | | | | | | | | | | | +--Macaca nemestrina (pig-tailed macaque) (1) | | | | | | | | | | | | | | | +--Chlorocebus sabaeus (1) | | | | | | | | | | | | | | | +--Macaca fascicularis (crab-eating macaque) (1) | | | | | | | | | | | | | | | +--Macaca mulatta (Rhesus monkey) (1) | | | | | | | | | | | | | | | +--Mandrillus leucophaeus (drill) (1) | | | | | | | | | | | | | +--Colobinae (4) | | | | | | | | | | | | | +--Colobus angolensis palliatus (1) | | | | | | | | | | | | | +--Rhinopithecus bieti (Black snub-nosed monkey) (1) | | | | | | | | | | | | | +--Piliocolobus tephrosceles (Ugandan red Colobus) (1) | | | | | | | | | | | | | +--Rhinopithecus roxellana (golden snub-nosed monkey) (1) | | | | | | | | | | | +--Platyrrhini (4) | | | | | | | | | | | +--Aotidae (1) | | | | | | | | | | | | | +--Aotus nancymaae (Ma's night monkey) (1) | | | | | | | | | | | +--Cebidae (3) | | | | | | | | | | | +--Saimiriinae (1) | | | | | | | | | | | | | +--Saimiri boliviensis boliviensis (Bolivian squirrel monkey) (1) | | | | | | | | | | | +--Cebinae (1) | | | | | | | | | | | | | +--Cebus apella (Tufted capuchin) (1) | | | | | | | | | | | +--Callitrichinae (1) | | | | | | | | | | | +--Callithrix jacchus (white-tufted-ear marmoset) (1) | | | | | | | | | +--Strepsirrhini (4) | | | | | | | | | +--Lemuriformes (3) | | | | | | | | | | | +--Indriidae (1) | | | | | | | | | | | | | +--Propithecus coquereli (Coquerel's sifaka) (1) | | | | | | | | | | | +--Cheirogaleidae (2) | | | | | | | | | | | +--Microcebus murinus (gray mouse lemur) (2) | | | | | | | | | +--Lorisiformes (1) | | | | | | | | | +--Galagidae (1) | | | | | | | | | +--Otolemur garnettii (small-eared galago) (1) | | | | | | | +--Scandentia (1) | | | | | | | | | +--Tupaiidae (1) | | | | | | | | | +--Tupaia chinensis (Chinese tree shrew) (1) | | | | | | | +--Glires (27) | | | | | | | +--Rodentia (26) | | | | | | | | | +--Hystricognathi (4) | | | | | | | | | | | +--Caviidae (1) | | | | | | | | | | | | | +--Cavia porcellus (Domestic guinea pig) (1) | | | | | | | | | | | +--Bathyergidae (2) | | | | | | | | | | | | | +--Fukomys damarensis (Damara mole-rat) (1) | | | | | | | | | | | | | +--Heterocephalus glaber (naked mole-rat) (1) | | | | | | | | | | | +--Octodontidae (1) | | | | | | | | | | | +--Octodon degus (degu) (1) | | | | | | | | | +--Sciurognathi (22) | | | | | | | | | +--Muroidea (13) | | | | | | | | | | | +--Spalacidae (2) | | | | | | | | | | | | | +--Spalacinae (2) | | | | | | | | | | | | | +--Nannospalax galili (Upper Galilee mountains blind mole rat) (2) | | | | | | | | | | | +--Muridae (6) | | | | | | | | | | | | | +--Murinae (6) | | | | | | | | | | | | | +--Rattus norvegicus (Norway rat) (2) | | | | | | | | | | | | | +--Mus (4) | | | | | | | | | | | | | +--Mus spicilegus (steppe mouse) (2) | | | | | | | | | | | | | +--Mus musculus (house mouse) (2) | | | | | | | | | | | +--Cricetidae (5) | | | | | | | | | | | +--Cricetinae (2) | | | | | | | | | | | | | +--Cricetulus griseus (Chinese hamster) (1) | | | | | | | | | | | | | +--Mesocricetus auratus (golden hamster) (1) | | | | | | | | | | | +--Arvicolinae (1) | | | | | | | | | | | | | +--Microtus ochrogaster (prairie vole) (1) | | | | | | | | | | | +--Neotominae (2) | | | | | | | | | | | +--Neotoma lepida (desert woodrat) (1) | | | | | | | | | | | +--Peromyscus maniculatus bairdii (prairie deer mouse) (1) | | | | | | | | | +--Sciuridae (6) | | | | | | | | | | | +--Xerinae (4) | | | | | | | | | | | | | +--Marmotini (4) | | | | | | | | | | | | | +--Marmota marmota marmota (Alpine marmot) (1) | | | | | | | | | | | | | +--Spermophilus tridecemlineatus (thirteen-lined ground squirrel) (1) | | | | | | | | | | | | | +--Marmota monax (woodchuck) (1) | | | | | | | | | | | | | +--Spermophilus dauricus (Daurian ground squirrel) (1) | | | | | | | | | | | +--Sciurinae (2) | | | | | | | | | | | +--Sciurini (2) | | | | | | | | | | | +--Sciurus carolinensis (gray squirrel) (1) | | | | | | | | | | | +--Sciurus vulgaris (Eurasian red squirrel) (1) | | | | | | | | | +--Heteromyidae (1) | | | | | | | | | | | +--Dipodomyinae (1) | | | | | | | | | | | +--Dipodomys ordii (Ord's kangaroo rat) (1) | | | | | | | | | +--Dipodidae (1) | | | | | | | | | | | +--Dipodinae (1) | | | | | | | | | | | +--Jaculus jaculus (lesser Egyptian jerboa) (1) | | | | | | | | | +--Castoridae (1) | | | | | | | | | +--Castor canadensis (American beaver) (1) | | | | | | | +--Lagomorpha (1) | | | | | | | +--Leporidae (1) | | | | | | | +--Oryctolagus cuniculus (rabbit) (1) | | | | | +--Laurasiatheria (70) | | | | | +--Carnivora (24) | | | | | | | +--Feliformia (9) | | | | | | | | | +--Herpestidae (1) | | | | | | | | | | | +--Suricata suricatta (meerkat) (1) | | | | | | | | | +--Hyaenidae (1) | | | | | | | | | | | +--Crocuta crocuta (spotted hyena) (1) | | | | | | | | | +--Felidae (7) | | | | | | | | | +--Pantherinae (2) | | | | | | | | | | | +--Panthera tigris altaica (Amur tiger) (1) | | | | | | | | | | | +--Panthera leo (lion) (1) | | | | | | | | | +--Felinae (4) | | | | | | | | | | | +--Puma concolor (puma) (1) | | | | | | | | | | | +--Felis catus (domestic cat) (1) | | | | | | | | | | | +--Lynx pardinus (Spanish lynx) (1) | | | | | | | | | | | +--Lynx canadensis (Canada lynx) (1) | | | | | | | | | +--Acinonychinae (1) | | | | | | | | | +--Acinonyx jubatus (cheetah) (1) | | | | | | | +--Caniformia (15) | | | | | | | +--Phocidae (2) | | | | | | | | | +--Monachus schauinslandi (Hawaiian monk seal) (1) | | | | | | | | | +--Leptonychotes weddellii (Weddell seal) (1) | | | | | | | +--Otariidae (1) | | | | | | | | | +--Callorhinus ursinus (northern fur seal) (1) | | | | | | | +--Mustelidae (4) | | | | | | | | | +--Martinae (1) | | | | | | | | | | | +--Gulo gulo (wolverine) (1) | | | | | | | | | +--Lutrinae (1) | | | | | | | | | | | +--Enhydra lutris kenyoni (1) | | | | | | | | | +--Mustelinae (2) | | | | | | | | | +--Neovison vison (1) | | | | | | | | | +--Mustela putorius furo (domestic ferret) (1) | | | | | | | +--Canidae (4) | | | | | | | | | +--Canis lupus dingo (dingo) (1) | | | | | | | | | +--Vulpes vulpes (red fox) (1) | | | | | | | | | +--Nyctereutes procyonoides (raccoon dog) (1) | | | | | | | | | +--Canis lupus familiaris (dog) (1) | | | | | | | +--Ursidae (3) | | | | | | | | | +--Ursus americanus (American black bear) (1) | | | | | | | | | +--Ailuropoda melanoleuca (giant panda) (1) | | | | | | | | | +--Ursus maritimus (polar bear) (1) | | | | | | | +--Odobenidae (1) | | | | | | | +--Odobenus rosmarus divergens (Pacific walrus) (1) | | | | | +--Cetartiodactyla (28) | | | | | | | +--Tylopoda (4) | | | | | | | | | +--Camelidae (4) | | | | | | | | | +--Vicugna pacos (alpaca) (1) | | | | | | | | | +--Camelus dromedarius (Arabian camel) (1) | | | | | | | | | +--Camelus ferus (Wild Bactrian camel) (1) | | | | | | | | | +--Camelus bactrianus (Bactrian camel) (1) | | | | | | | +--Cetacea (10) | | | | | | | | | +--Odontoceti (7) | | | | | | | | | | | +--Monodontidae (2) | | | | | | | | | | | | | +--Monodon monoceros (narwhal) (1) | | | | | | | | | | | | | +--Delphinapterus leucas (beluga whale) (1) | | | | | | | | | | | +--Phocoenidae (1) | | | | | | | | | | | | | +--Phocoena sinus (vaquita) (1) | | | | | | | | | | | +--Physeteridae (1) | | | | | | | | | | | | | +--Physeter catodon (sperm whale) (1) | | | | | | | | | | | +--Lipotidae (1) | | | | | | | | | | | | | +--Lipotes vexillifer (Yangtze River dolphin) (1) | | | | | | | | | | | +--Delphinidae (2) | | | | | | | | | | | +--Sousa chinensis (Indo-pacific humpbacked dolphin) (1) | | | | | | | | | | | +--Tursiops truncatus (bottlenosed dolphin) (1) | | | | | | | | | +--Mysticeti (3) | | | | | | | | | +--Balaenopteridae (2) | | | | | | | | | | | +--Balaenoptera musculus (Blue whale) (1) | | | | | | | | | | | +--Balaenoptera physalus (Fin whale) (1) | | | | | | | | | +--Eschrichtiidae (1) | | | | | | | | | +--Eschrichtius robustus (grey whale) (1) | | | | | | | +--Ruminantia (12) | | | | | | | | | +--Pecora (12) | | | | | | | | | +--Bovidae (7) | | | | | | | | | | | +--Bovinae (5) | | | | | | | | | | | | | +--Bos grunniens (domestic yak) (1) | | | | | | | | | | | | | +--Bos indicus (1) | | | | | | | | | | | | | +--Bos (1) | | | | | | | | | | | | | | | +--Bos indicus x Bos taurus (hybrid cattle) (1) | | | | | | | | | | | | | +--Bos taurus (cattle) (1) | | | | | | | | | | | | | +--Bos grunniens mutus (1) | | | | | | | | | | | +--Caprinae (2) | | | | | | | | | | | +--Capra hircus (goat) (1) | | | | | | | | | | | +--Ovis aries (sheep) (1) | | | | | | | | | +--Moschidae (1) | | | | | | | | | | | +--Moschus moschiferus (Siberian musk deer) (1) | | | | | | | | | +--Cervidae (4) | | | | | | | | | +--Odocoileinae (1) | | | | | | | | | | | +--Odocoileus virginianus texanus (1) | | | | | | | | | +--Muntiacinae (1) | | | | | | | | | | | +--Muntiacus reevesi (Chinese muntjac) (1) | | | | | | | | | +--Cervinae (2) | | | | | | | | | +--Cervus elaphus yarkandensis (1) | | | | | | | | | +--Cervus elaphus hippelaphus (1) | | | | | | | +--Suina (2) | | | | | | | +--Suidae (1) | | | | | | | | | +--Sus scrofa (pig) (1) | | | | | | | +--Tayassuidae (1) | | | | | | | +--Catagonus wagneri (Chacoan peccary) (1) | | | | | +--Insectivora (2) | | | | | | | +--Talpidae (1) | | | | | | | | | +--Galemys pyrenaicus (1) | | | | | | | +--Erinaceidae (1) | | | | | | | +--Erinaceinae (1) | | | | | | | +--Erinaceus europaeus (western European hedgehog) (1) | | | | | +--Chiroptera (13) | | | | | | | +--Microchiroptera (10) | | | | | | | | | +--Rhinolophidae (2) | | | | | | | | | | | +--Hipposiderinae (1) | | | | | | | | | | | | | +--Hipposideros armiger (1) | | | | | | | | | | | +--Rhinolophinae (1) | | | | | | | | | | | +--Rhinolophus ferrumequinum (greater horseshoe bat) (1) | | | | | | | | | +--Phyllostomidae (1) | | | | | | | | | | | +--Phyllostominae (1) | | | | | | | | | | | +--Phyllostomus discolor (pale spear-nosed bat) (1) | | | | | | | | | +--Molossidae (1) | | | | | | | | | | | +--Molossus molossus (Pallas's mastiff bat) (1) | | | | | | | | | +--Vespertilionidae (6) | | | | | | | | | +--Myotis lucifugus (little brown bat) (1) | | | | | | | | | +--Eptesicus nilssoni (northern bat) (1) | | | | | | | | | +--Myotis davidii (1) | | | | | | | | | +--Pipistrellus kuhlii (Kuhl's pipistrelle) (1) | | | | | | | | | +--Myotis brandtii (1) | | | | | | | | | +--Myotis myotis (1) | | | | | | | +--Megachiroptera (3) | | | | | | | +--Pteropodidae (3) | | | | | | | +--Pteropodinae (3) | | | | | | | +--Rousettus aegyptiacus (Egyptian rousette) (1) | | | | | | | +--Pteropus vampyrus (large flying fox) (1) | | | | | | | +--Pteropus alecto (black flying fox) (1) | | | | | +--Perissodactyla (3) | | | | | +--Equidae (2) | | | | | | | +--Equus caballus (horse) (1) | | | | | | | +--Equus asinus (ass) (1) | | | | | +--Rhinocerotidae (1) | | | | | +--Diceros bicornis minor (1) | | | +--Testudines (8) | | | | | +--Cryptodira (8) | | | | | +--Trionychoidea (1) | | | | | | | +--Trionychidae (1) | | | | | | | +--Pelodiscus sinensis (Chinese softshell turtle) (1) | | | | | +--Chelonioidea (1) | | | | | | | +--Cheloniidae (1) | | | | | | | +--Chelonia mydas (green seaturtle) (1) | | | | | +--Testudinoidea (6) | | | | | +--Emydidae (1) | | | | | | | +--Chrysemys picta bellii (western painted turtle) (1) | | | | | +--Geoemydidae (1) | | | | | | | +--Geoemydinae (1) | | | | | | | +--Mauremys mutica (1) | | | | | +--Chelydridae (2) | | | | | | | +--Chelydra serpentina (snapping turtle) (1) | | | | | | | +--Platysternon megacephalum (big-headed turtle) (1) | | | | | +--Testudinidae (2) | | | | | +--Geochelone nigra abingdoni (1) | | | | | +--Gopherus agassizii (desert tortoise) (1) | | | +--Archosauria (3) | | | +--Crocodylidae (3) | | | +--Crocodylinae (1) | | | | | +--Crocodylus porosus (Australian saltwater crocodile) (1) | | | +--Alligatorinae (2) | | | +--Alligator mississippiensis (American alligator) (1) | | | +--Alligator sinensis (Chinese alligator) (1) | +--Opisthokonta (8) | +--Metazoa (8) | +--Eumetazoa (8) | +--Bilateria (8) | +--Deuterostomia (8) | +--Chordata (8) | +--Craniata (8) | +--Vertebrata (8) | +--Gnathostomata (8) | +--Teleostomi (8) | +--Euteleostomi (8) | +--Sarcopterygii (8) | +--Dipnotetrapodomorpha (8) | +--Tetrapoda (8) | +--Amniota (8) | +--Sauropsida (2) | | | +--Sauria (2) | | | +--Archelosauria (2) | | | +--Testudinata (2) | | | +--Testudines (2) | | | +--Cryptodira (2) | | | +--Durocryptodira (2) | | | +--Testudinoidea (2) | | | +--Emydidae (1) | | | | | +--Terrapene (1) | | | | | +--Terrapene carolina triunguis (three-toed box turtle) (1) | | | +--Testudinidae (1) | | | +--Gopherus evgoodei (goodes thornscrub tortoise) (1) | +--Mammalia (6) | +--Theria (6) | +--Eutheria (6) | +--Afrotheria (1) | | | +--Tubulidentata (1) | | | +--Orycteropodidae (1) | | | +--Orycteropus (1) | | | +--Orycteropus afer afer (1) | +--Boreoeutheria (5) | +--Euarchontoglires (3) | | | +--Primates (3) | | | +--Haplorrhini (2) | | | | | +--Simiiformes (1) | | | | | | | +--Platyrrhini (1) | | | | | | | +--Cebidae (1) | | | | | | | +--Cebinae (1) | | | | | | | +--Cebus imitator (Panamanian white-faced capuchin) (1) | | | | | +--Tarsiiformes (1) | | | | | +--Tarsiidae (1) | | | | | +--Carlito syrichta (Philippine tarsier) (1) | | | +--Strepsirrhini (1) | | | +--Lemuriformes (1) | | | +--Lemuridae (1) | | | +--Prolemur simus (greater bamboo lemur) (1) | +--Laurasiatheria (2) | +--Artiodactyla (2) | +--Whippomorpha (1) | | | +--Cetacea (1) | | | +--Odontoceti (1) | | | +--Phocoenidae (1) | | | +--Neophocaena (1) | | | +--Neophocaena asiaeorientalis asiaeorientalis (yangtze finless porpoise) (1) | +--Ruminantia (1) | +--Pecora (1) | +--Bovidae (1) | +--Bovinae (1) | +--Bison (1) | +--Bison bison bison (north american plains bison) (1)