# Species tree for RF01093 # Generated from Rfam version 15.00 | +--Eukaryota (563) | | | +--Metazoa (524) | | | | | +--Chordata (524) | | | | | +--Craniata (524) | | | | | +--Vertebrata (524) | | | | | +--Euteleostomi (524) | | | | | +--Actinopterygii (1) | | | | | | | +--Neopterygii (1) | | | | | | | +--Teleostei (1) | | | | | | | +--Euteleostei (1) | | | | | | | +--Neoteleostei (1) | | | | | | | +--Acanthomorpha (1) | | | | | | | +--Acanthopterygii (1) | | | | | | | +--Percomorpha (1) | | | | | | | +--Scorpaeniformes (1) | | | | | | | +--Cottoidei (1) | | | | | | | +--Liparidae (1) | | | | | | | +--Liparis tanakae (1) | | | | | +--Lepidosauria (5) | | | | | | | +--Sphenodontia (5) | | | | | | | +--Sphenodontidae (5) | | | | | | | +--Sphenodon punctatus (tuatara) (5) | | | | | +--Mammalia (336) | | | | | | | +--Eutheria (336) | | | | | | | +--Afrotheria (6) | | | | | | | | | +--Sirenia (2) | | | | | | | | | | | +--Trichechidae (2) | | | | | | | | | | | +--Trichechus manatus latirostris (2) | | | | | | | | | +--Proboscidea (2) | | | | | | | | | | | +--Elephantidae (2) | | | | | | | | | | | +--Loxodonta africana (African savanna elephant) (2) | | | | | | | | | +--Chrysochloridae (2) | | | | | | | | | +--Chrysochlorinae (2) | | | | | | | | | +--Chrysochloris asiatica (2) | | | | | | | +--Euarchontoglires (141) | | | | | | | | | +--Primates (77) | | | | | | | | | | | +--Haplorrhini (63) | | | | | | | | | | | | | +--Catarrhini (55) | | | | | | | | | | | | | | | +--Hominidae (16) | | | | | | | | | | | | | | | | | +--Pongo abelii (Sumatran orangutan) (2) | | | | | | | | | | | | | | | | | +--Gorilla gorilla gorilla (western lowland gorilla) (3) | | | | | | | | | | | | | | | | | +--Pan paniscus (pygmy chimpanzee) (3) | | | | | | | | | | | | | | | | | +--Homo sapiens (human) (4) | | | | | | | | | | | | | | | | | +--Pan troglodytes (chimpanzee) (4) | | | | | | | | | | | | | | | +--Cercopithecidae (37) | | | | | | | | | | | | | | | | | +--Cercopithecinae (25) | | | | | | | | | | | | | | | | | | | +--Papio anubis (Olive baboon) (3) | | | | | | | | | | | | | | | | | | | +--Theropithecus gelada (gelada baboon) (3) | | | | | | | | | | | | | | | | | | | +--Cercocebus atys (sooty mangabey) (3) | | | | | | | | | | | | | | | | | | | +--Macaca nemestrina (pig-tailed macaque) (3) | | | | | | | | | | | | | | | | | | | +--Macaca fascicularis (crab-eating macaque) (3) | | | | | | | | | | | | | | | | | | | +--Chlorocebus sabaeus (4) | | | | | | | | | | | | | | | | | | | +--Macaca mulatta (Rhesus monkey) (3) | | | | | | | | | | | | | | | | | | | +--Mandrillus leucophaeus (drill) (3) | | | | | | | | | | | | | | | | | +--Colobinae (12) | | | | | | | | | | | | | | | | | +--Colobus angolensis palliatus (3) | | | | | | | | | | | | | | | | | +--Rhinopithecus bieti (Black snub-nosed monkey) (3) | | | | | | | | | | | | | | | | | +--Piliocolobus tephrosceles (Ugandan red Colobus) (3) | | | | | | | | | | | | | | | | | +--Rhinopithecus roxellana (golden snub-nosed monkey) (3) | | | | | | | | | | | | | | | +--Hylobatidae (2) | | | | | | | | | | | | | | | +--Nomascus leucogenys (Northern white-cheeked gibbon) (2) | | | | | | | | | | | | | +--Platyrrhini (8) | | | | | | | | | | | | | +--Aotidae (2) | | | | | | | | | | | | | | | +--Aotus nancymaae (Ma's night monkey) (2) | | | | | | | | | | | | | +--Cebidae (6) | | | | | | | | | | | | | +--Saimiriinae (2) | | | | | | | | | | | | | | | +--Saimiri boliviensis boliviensis (Bolivian squirrel monkey) (2) | | | | | | | | | | | | | +--Cebinae (2) | | | | | | | | | | | | | | | +--Cebus apella (Tufted capuchin) (2) | | | | | | | | | | | | | +--Callitrichinae (2) | | | | | | | | | | | | | +--Callithrix jacchus (white-tufted-ear marmoset) (2) | | | | | | | | | | | +--Strepsirrhini (14) | | | | | | | | | | | +--Lemuriformes (9) | | | | | | | | | | | | | +--Indriidae (5) | | | | | | | | | | | | | | | +--Propithecus coquereli (Coquerel's sifaka) (5) | | | | | | | | | | | | | +--Cheirogaleidae (4) | | | | | | | | | | | | | +--Microcebus murinus (gray mouse lemur) (4) | | | | | | | | | | | +--Lorisiformes (5) | | | | | | | | | | | +--Galagidae (5) | | | | | | | | | | | +--Otolemur garnettii (small-eared galago) (5) | | | | | | | | | +--Scandentia (2) | | | | | | | | | | | +--Tupaiidae (2) | | | | | | | | | | | +--Tupaia chinensis (Chinese tree shrew) (2) | | | | | | | | | +--Glires (62) | | | | | | | | | +--Rodentia (61) | | | | | | | | | | | +--Hystricognathi (11) | | | | | | | | | | | | | +--Chinchillidae (1) | | | | | | | | | | | | | | | +--Chinchilla lanigera (1) | | | | | | | | | | | | | +--Caviidae (1) | | | | | | | | | | | | | | | +--Cavia porcellus (Domestic guinea pig) (1) | | | | | | | | | | | | | +--Bathyergidae (5) | | | | | | | | | | | | | | | +--Fukomys damarensis (Damara mole-rat) (4) | | | | | | | | | | | | | | | +--Heterocephalus glaber (naked mole-rat) (1) | | | | | | | | | | | | | +--Octodontidae (4) | | | | | | | | | | | | | +--Octodon degus (degu) (4) | | | | | | | | | | | +--Sciurognathi (50) | | | | | | | | | | | +--Muroidea (15) | | | | | | | | | | | | | +--Spalacidae (1) | | | | | | | | | | | | | | | +--Spalacinae (1) | | | | | | | | | | | | | | | +--Nannospalax galili (Upper Galilee mountains blind mole rat) (1) | | | | | | | | | | | | | +--Muridae (6) | | | | | | | | | | | | | | | +--Murinae (6) | | | | | | | | | | | | | | | +--Rattus norvegicus (Norway rat) (2) | | | | | | | | | | | | | | | +--Mus (4) | | | | | | | | | | | | | | | +--Mus spicilegus (steppe mouse) (2) | | | | | | | | | | | | | | | +--Mus musculus (house mouse) (2) | | | | | | | | | | | | | +--Cricetidae (8) | | | | | | | | | | | | | +--Cricetinae (2) | | | | | | | | | | | | | | | +--Cricetulus griseus (Chinese hamster) (1) | | | | | | | | | | | | | | | +--Mesocricetus auratus (golden hamster) (1) | | | | | | | | | | | | | +--Arvicolinae (2) | | | | | | | | | | | | | | | +--Microtus ochrogaster (prairie vole) (2) | | | | | | | | | | | | | +--Neotominae (4) | | | | | | | | | | | | | +--Neotoma lepida (desert woodrat) (2) | | | | | | | | | | | | | +--Peromyscus maniculatus bairdii (prairie deer mouse) (2) | | | | | | | | | | | +--Sciuridae (30) | | | | | | | | | | | | | +--Xerinae (23) | | | | | | | | | | | | | | | +--Marmotini (23) | | | | | | | | | | | | | | | +--Marmota marmota marmota (Alpine marmot) (2) | | | | | | | | | | | | | | | +--Spermophilus tridecemlineatus (thirteen-lined ground squirrel) (4) | | | | | | | | | | | | | | | +--Spermophilus parryii (Arctic ground squirrel) (4) | | | | | | | | | | | | | | | +--Spermophilus dauricus (Daurian ground squirrel) (7) | | | | | | | | | | | | | | | +--Marmota monax (woodchuck) (6) | | | | | | | | | | | | | +--Sciurinae (7) | | | | | | | | | | | | | +--Sciurini (7) | | | | | | | | | | | | | +--Sciurus carolinensis (gray squirrel) (3) | | | | | | | | | | | | | +--Sciurus vulgaris (Eurasian red squirrel) (4) | | | | | | | | | | | +--Heteromyidae (2) | | | | | | | | | | | | | +--Dipodomyinae (2) | | | | | | | | | | | | | +--Dipodomys ordii (Ord's kangaroo rat) (2) | | | | | | | | | | | +--Dipodidae (1) | | | | | | | | | | | | | +--Dipodinae (1) | | | | | | | | | | | | | +--Jaculus jaculus (lesser Egyptian jerboa) (1) | | | | | | | | | | | +--Castoridae (2) | | | | | | | | | | | +--Castor canadensis (American beaver) (2) | | | | | | | | | +--Lagomorpha (1) | | | | | | | | | +--Leporidae (1) | | | | | | | | | +--Oryctolagus cuniculus (rabbit) (1) | | | | | | | +--Laurasiatheria (189) | | | | | | | +--Carnivora (77) | | | | | | | | | +--Feliformia (32) | | | | | | | | | | | +--Hyaenidae (2) | | | | | | | | | | | | | +--Crocuta crocuta (spotted hyena) (2) | | | | | | | | | | | +--Herpestidae (5) | | | | | | | | | | | | | +--Suricata suricatta (meerkat) (5) | | | | | | | | | | | +--Felidae (25) | | | | | | | | | | | +--Pantherinae (8) | | | | | | | | | | | | | +--Panthera leo (lion) (6) | | | | | | | | | | | | | +--Panthera tigris altaica (Amur tiger) (2) | | | | | | | | | | | +--Felinae (13) | | | | | | | | | | | | | +--Puma concolor (puma) (3) | | | | | | | | | | | | | +--Felis catus (domestic cat) (5) | | | | | | | | | | | | | +--Lynx pardinus (Spanish lynx) (1) | | | | | | | | | | | | | +--Lynx canadensis (Canada lynx) (4) | | | | | | | | | | | +--Acinonychinae (4) | | | | | | | | | | | +--Acinonyx jubatus (cheetah) (4) | | | | | | | | | +--Caniformia (45) | | | | | | | | | +--Otariidae (3) | | | | | | | | | | | +--Callorhinus ursinus (northern fur seal) (3) | | | | | | | | | +--Phocidae (4) | | | | | | | | | | | +--Monachus schauinslandi (Hawaiian monk seal) (1) | | | | | | | | | | | +--Leptonychotes weddellii (Weddell seal) (3) | | | | | | | | | +--Mustelidae (11) | | | | | | | | | | | +--Martinae (3) | | | | | | | | | | | | | +--Gulo gulo (wolverine) (3) | | | | | | | | | | | +--Lutrinae (2) | | | | | | | | | | | | | +--Enhydra lutris kenyoni (2) | | | | | | | | | | | +--Mustelinae (6) | | | | | | | | | | | +--Neovison vison (2) | | | | | | | | | | | +--Mustela putorius furo (domestic ferret) (4) | | | | | | | | | +--Canidae (14) | | | | | | | | | | | +--Canis lupus dingo (dingo) (3) | | | | | | | | | | | +--Vulpes vulpes (red fox) (3) | | | | | | | | | | | +--Nyctereutes procyonoides (raccoon dog) (4) | | | | | | | | | | | +--Canis lupus familiaris (dog) (4) | | | | | | | | | +--Ursidae (10) | | | | | | | | | | | +--Ursus americanus (American black bear) (4) | | | | | | | | | | | +--Ailuropoda melanoleuca (giant panda) (3) | | | | | | | | | | | +--Ursus maritimus (polar bear) (3) | | | | | | | | | +--Odobenidae (3) | | | | | | | | | +--Odobenus rosmarus divergens (Pacific walrus) (3) | | | | | | | +--Cetartiodactyla (58) | | | | | | | | | +--Tylopoda (23) | | | | | | | | | | | +--Camelidae (23) | | | | | | | | | | | +--Vicugna pacos (alpaca) (3) | | | | | | | | | | | +--Camelus dromedarius (Arabian camel) (10) | | | | | | | | | | | +--Camelus ferus (Wild Bactrian camel) (5) | | | | | | | | | | | +--Camelus bactrianus (Bactrian camel) (5) | | | | | | | | | +--Cetacea (17) | | | | | | | | | | | +--Odontoceti (13) | | | | | | | | | | | | | +--Monodontidae (3) | | | | | | | | | | | | | | | +--Monodon monoceros (narwhal) (1) | | | | | | | | | | | | | | | +--Delphinapterus leucas (beluga whale) (2) | | | | | | | | | | | | | +--Phocoenidae (3) | | | | | | | | | | | | | | | +--Phocoena sinus (vaquita) (3) | | | | | | | | | | | | | +--Physeteridae (2) | | | | | | | | | | | | | | | +--Physeter catodon (sperm whale) (2) | | | | | | | | | | | | | +--Lipotidae (1) | | | | | | | | | | | | | | | +--Lipotes vexillifer (Yangtze River dolphin) (1) | | | | | | | | | | | | | +--Delphinidae (4) | | | | | | | | | | | | | +--Sousa chinensis (Indo-pacific humpbacked dolphin) (2) | | | | | | | | | | | | | +--Tursiops truncatus (bottlenosed dolphin) (2) | | | | | | | | | | | +--Mysticeti (4) | | | | | | | | | | | +--Balaenopteridae (3) | | | | | | | | | | | | | +--Balaenoptera musculus (Blue whale) (3) | | | | | | | | | | | +--Eschrichtiidae (1) | | | | | | | | | | | +--Eschrichtius robustus (grey whale) (1) | | | | | | | | | +--Ruminantia (16) | | | | | | | | | | | +--Pecora (16) | | | | | | | | | | | +--Bovidae (9) | | | | | | | | | | | | | +--Bovinae (3) | | | | | | | | | | | | | | | +--Bos grunniens (domestic yak) (1) | | | | | | | | | | | | | | | +--Bos taurus (cattle) (1) | | | | | | | | | | | | | | | +--Bos grunniens mutus (1) | | | | | | | | | | | | | +--Caprinae (6) | | | | | | | | | | | | | +--Capra hircus (goat) (3) | | | | | | | | | | | | | +--Ovis aries (sheep) (3) | | | | | | | | | | | +--Moschidae (1) | | | | | | | | | | | | | +--Moschus moschiferus (Siberian musk deer) (1) | | | | | | | | | | | +--Cervidae (6) | | | | | | | | | | | +--Odocoileinae (1) | | | | | | | | | | | | | +--Odocoileus virginianus texanus (1) | | | | | | | | | | | +--Muntiacinae (3) | | | | | | | | | | | | | +--Muntiacus reevesi (Chinese muntjac) (3) | | | | | | | | | | | +--Cervinae (2) | | | | | | | | | | | +--Cervus elaphus yarkandensis (1) | | | | | | | | | | | +--Cervus elaphus hippelaphus (1) | | | | | | | | | +--Suina (2) | | | | | | | | | +--Tayassuidae (1) | | | | | | | | | | | +--Catagonus wagneri (Chacoan peccary) (1) | | | | | | | | | +--Suidae (1) | | | | | | | | | +--Sus scrofa (pig) (1) | | | | | | | +--Insectivora (3) | | | | | | | | | +--Talpidae (1) | | | | | | | | | | | +--Galemys pyrenaicus (1) | | | | | | | | | +--Erinaceidae (2) | | | | | | | | | +--Erinaceinae (2) | | | | | | | | | +--Erinaceus europaeus (western European hedgehog) (2) | | | | | | | +--Chiroptera (28) | | | | | | | | | +--Microchiroptera (19) | | | | | | | | | | | +--Rhinolophidae (4) | | | | | | | | | | | | | +--Hipposiderinae (2) | | | | | | | | | | | | | | | +--Hipposideros armiger (2) | | | | | | | | | | | | | +--Rhinolophinae (2) | | | | | | | | | | | | | +--Rhinolophus ferrumequinum (greater horseshoe bat) (2) | | | | | | | | | | | +--Phyllostomidae (2) | | | | | | | | | | | | | +--Phyllostominae (2) | | | | | | | | | | | | | +--Phyllostomus discolor (pale spear-nosed bat) (2) | | | | | | | | | | | +--Molossidae (3) | | | | | | | | | | | | | +--Molossus molossus (Pallas's mastiff bat) (3) | | | | | | | | | | | +--Vespertilionidae (10) | | | | | | | | | | | +--Myotis lucifugus (little brown bat) (1) | | | | | | | | | | | +--Eptesicus nilssoni (northern bat) (2) | | | | | | | | | | | +--Myotis davidii (1) | | | | | | | | | | | +--Pipistrellus kuhlii (Kuhl's pipistrelle) (2) | | | | | | | | | | | +--Myotis brandtii (2) | | | | | | | | | | | +--Myotis myotis (2) | | | | | | | | | +--Megachiroptera (9) | | | | | | | | | +--Pteropodidae (9) | | | | | | | | | +--Pteropodinae (9) | | | | | | | | | +--Rousettus aegyptiacus (Egyptian rousette) (2) | | | | | | | | | +--Pteropus vampyrus (large flying fox) (4) | | | | | | | | | +--Pteropus alecto (black flying fox) (3) | | | | | | | +--Perissodactyla (23) | | | | | | | +--Equidae (22) | | | | | | | | | +--Equus caballus (horse) (10) | | | | | | | | | +--Equus asinus (ass) (12) | | | | | | | +--Rhinocerotidae (1) | | | | | | | +--Diceros bicornis minor (1) | | | | | +--Testudines (160) | | | | | | | +--Cryptodira (149) | | | | | | | | | +--Chelonioidea (2) | | | | | | | | | | | +--Cheloniidae (2) | | | | | | | | | | | +--Chelonia mydas (green seaturtle) (2) | | | | | | | | | +--Trionychoidea (1) | | | | | | | | | | | +--Trionychidae (1) | | | | | | | | | | | +--Pelodiscus sinensis (Chinese softshell turtle) (1) | | | | | | | | | +--Testudinoidea (146) | | | | | | | | | +--Emydidae (10) | | | | | | | | | | | +--Chrysemys picta bellii (western painted turtle) (10) | | | | | | | | | +--Geoemydidae (26) | | | | | | | | | | | +--Geoemydinae (26) | | | | | | | | | | | +--Mauremys mutica (26) | | | | | | | | | +--Chelydridae (103) | | | | | | | | | | | +--Chelydra serpentina (snapping turtle) (72) | | | | | | | | | | | +--Platysternon megacephalum (big-headed turtle) (31) | | | | | | | | | +--Testudinidae (7) | | | | | | | | | +--Geochelone nigra abingdoni (5) | | | | | | | | | +--Gopherus agassizii (desert tortoise) (2) | | | | | | | +--Pleurodira (11) | | | | | | | +--Pelomedusidae (11) | | | | | | | +--Pelusios castaneus (11) | | | | | +--Archosauria (22) | | | | | +--Dinosauria (5) | | | | | | | +--Saurischia (5) | | | | | | | +--Theropoda (5) | | | | | | | +--Coelurosauria (5) | | | | | | | +--Aves (5) | | | | | | | +--Neognathae (5) | | | | | | | +--Passeriformes (5) | | | | | | | +--Acanthizidae (1) | | | | | | | | | +--Origma solitaria (1) | | | | | | | +--Corvoidea (2) | | | | | | | | | +--Aegithalidae (1) | | | | | | | | | | | +--Aegithalos caudatus (1) | | | | | | | | | +--Corvidae (1) | | | | | | | | | +--Aphelocoma coerulescens (scrub jay) (1) | | | | | | | +--Muscicapidae (1) | | | | | | | | | +--Cercotrichas coryphoeus (Karoo scrub-robin) (1) | | | | | | | +--Mimidae (1) | | | | | | | +--Toxostoma redivivum (1) | | | | | +--Crocodylidae (17) | | | | | +--Crocodylinae (1) | | | | | | | +--Crocodylus porosus (Australian saltwater crocodile) (1) | | | | | +--Alligatorinae (16) | | | | | +--Alligator mississippiensis (American alligator) (9) | | | | | +--Alligator sinensis (Chinese alligator) (7) | | | +--Fungi (1) | | | | | +--Dikarya (1) | | | | | +--Basidiomycota (1) | | | | | +--Ustilaginomycotina (1) | | | | | +--Exobasidiomycetes (1) | | | | | +--Tilletiales (1) | | | | | +--Tilletiaceae (1) | | | | | +--Tilletia walkeri (1) | | | +--Viridiplantae (1) | | | | | +--Streptophyta (1) | | | | | +--Embryophyta (1) | | | | | +--Tracheophyta (1) | | | | | +--Spermatophyta (1) | | | | | +--Magnoliophyta (1) | | | | | +--eudicotyledons (1) | | | | | +--coreeudicotyledons (1) | | | | | +--rosids (1) | | | | | +--fabids (1) | | | | | +--Oxalidales (1) | | | | | +--Cephalotaceae (1) | | | | | +--Cephalotus follicularis (1) | | | +--Opisthokonta (37) | | | +--Metazoa (37) | | | +--Eumetazoa (37) | | | +--Bilateria (37) | | | +--Deuterostomia (37) | | | +--Chordata (37) | | | +--Craniata (37) | | | +--Vertebrata (37) | | | +--Gnathostomata (37) | | | +--Teleostomi (37) | | | +--Euteleostomi (37) | | | +--Sarcopterygii (37) | | | +--Dipnotetrapodomorpha (37) | | | +--Tetrapoda (37) | | | +--Amniota (37) | | | +--Sauropsida (23) | | | | | +--Sauria (23) | | | | | +--Archelosauria (23) | | | | | +--Testudinata (23) | | | | | +--Testudines (23) | | | | | +--Cryptodira (23) | | | | | +--Durocryptodira (23) | | | | | +--Testudinoidea (23) | | | | | +--Emydidae (17) | | | | | | | +--Terrapene (17) | | | | | | | +--Terrapene carolina triunguis (three-toed box turtle) (17) | | | | | +--Testudinidae (6) | | | | | +--Gopherus evgoodei (goodes thornscrub tortoise) (6) | | | +--Mammalia (14) | | | +--Theria (14) | | | +--Eutheria (14) | | | +--Afrotheria (2) | | | | | +--Tubulidentata (2) | | | | | +--Orycteropodidae (2) | | | | | +--Orycteropus (2) | | | | | +--Orycteropus afer afer (2) | | | +--Boreoeutheria (12) | | | +--Euarchontoglires (10) | | | | | +--Primates (10) | | | | | +--Haplorrhini (4) | | | | | | | +--Simiiformes (2) | | | | | | | | | +--Platyrrhini (2) | | | | | | | | | +--Cebidae (2) | | | | | | | | | +--Cebinae (2) | | | | | | | | | +--Cebus imitator (Panamanian white-faced capuchin) (2) | | | | | | | +--Tarsiiformes (2) | | | | | | | +--Tarsiidae (2) | | | | | | | +--Carlito syrichta (Philippine tarsier) (2) | | | | | +--Strepsirrhini (6) | | | | | +--Lemuriformes (6) | | | | | +--Lemuridae (6) | | | | | +--Prolemur simus (greater bamboo lemur) (6) | | | +--Laurasiatheria (2) | | | +--Artiodactyla (2) | | | +--Whippomorpha (1) | | | | | +--Cetacea (1) | | | | | +--Odontoceti (1) | | | | | +--Phocoenidae (1) | | | | | +--Neophocaena (1) | | | | | +--Neophocaena asiaeorientalis asiaeorientalis (yangtze finless porpoise) (1) | | | +--Ruminantia (1) | | | +--Pecora (1) | | | +--Bovidae (1) | | | +--Bovinae (1) | | | +--Bison (1) | | | +--Bison bison bison (north american plains bison) (1) | +--Bacteria (2) | +--Actinobacteria (1) | | | +--Actinobacteridae (1) | | | +--Actinomycetales (1) | | | +--Streptosporangineae (1) | | | +--Streptosporangiaceae (1) | | | +--Sphaerisporangium album (1) | +--Terrabacteriagroup (1) | +--Actinomycetota (1) | +--Actinomycetes (1) | +--Kitasatosporales (1) | +--Streptomycetaceae (1) | +--Streptomyces (1) | +--Streptomyces sp. SID5785 (1)