# Species tree for RF00401 # Generated from Rfam version 15.00 | +--Eukaryota (437) | +--Metazoa (408) | | | +--Chordata (408) | | | +--Cephalochordata (1) | | | | | +--Branchiostomidae (1) | | | | | +--Branchiostoma floridae (Florida lancelet) (1) | | | +--Craniata (407) | | | +--Vertebrata (407) | | | +--Euteleostomi (407) | | | +--Mammalia (391) | | | | | +--Metatheria (5) | | | | | | | +--Didelphimorphia (1) | | | | | | | | | +--Didelphidae (1) | | | | | | | | | +--Monodelphis domestica (gray short-tailed opossum) (1) | | | | | | | +--Dasyuromorphia (1) | | | | | | | | | +--Dasyuridae (1) | | | | | | | | | +--Sarcophilus harrisii (Tasmanian devil) (1) | | | | | | | +--Diprotodontia (3) | | | | | | | +--Vombatidae (2) | | | | | | | | | +--Vombatus ursinus (common wombat) (2) | | | | | | | +--Phascolarctidae (1) | | | | | | | +--Phascolarctos cinereus (koala) (1) | | | | | +--Eutheria (386) | | | | | +--Afrotheria (4) | | | | | | | +--Sirenia (1) | | | | | | | | | +--Trichechidae (1) | | | | | | | | | +--Trichechus manatus latirostris (1) | | | | | | | +--Proboscidea (1) | | | | | | | | | +--Elephantidae (1) | | | | | | | | | +--Loxodonta africana (African savanna elephant) (1) | | | | | | | +--Chrysochloridae (2) | | | | | | | +--Chrysochlorinae (2) | | | | | | | +--Chrysochloris asiatica (2) | | | | | +--Euarchontoglires (187) | | | | | | | +--Primates (107) | | | | | | | | | +--Haplorrhini (92) | | | | | | | | | | | +--Catarrhini (78) | | | | | | | | | | | | | +--Hominidae (22) | | | | | | | | | | | | | | | +--Pongo abelii (Sumatran orangutan) (4) | | | | | | | | | | | | | | | +--Homo sapiens (human) (5) | | | | | | | | | | | | | | | +--Gorilla gorilla gorilla (western lowland gorilla) (4) | | | | | | | | | | | | | | | +--Pan paniscus (pygmy chimpanzee) (4) | | | | | | | | | | | | | | | +--Pan troglodytes (chimpanzee) (5) | | | | | | | | | | | | | +--Cercopithecidae (52) | | | | | | | | | | | | | | | +--Cercopithecinae (35) | | | | | | | | | | | | | | | | | +--Macaca fascicularis (crab-eating macaque) (4) | | | | | | | | | | | | | | | | | +--Papio anubis (Olive baboon) (5) | | | | | | | | | | | | | | | | | +--Chlorocebus sabaeus (4) | | | | | | | | | | | | | | | | | +--Mandrillus leucophaeus (drill) (5) | | | | | | | | | | | | | | | | | +--Macaca mulatta (Rhesus monkey) (4) | | | | | | | | | | | | | | | | | +--Theropithecus gelada (gelada baboon) (4) | | | | | | | | | | | | | | | | | +--Cercocebus atys (sooty mangabey) (5) | | | | | | | | | | | | | | | | | +--Macaca nemestrina (pig-tailed macaque) (4) | | | | | | | | | | | | | | | +--Colobinae (17) | | | | | | | | | | | | | | | +--Colobus angolensis palliatus (4) | | | | | | | | | | | | | | | +--Rhinopithecus bieti (Black snub-nosed monkey) (5) | | | | | | | | | | | | | | | +--Piliocolobus tephrosceles (Ugandan red Colobus) (4) | | | | | | | | | | | | | | | +--Rhinopithecus roxellana (golden snub-nosed monkey) (4) | | | | | | | | | | | | | +--Hylobatidae (4) | | | | | | | | | | | | | +--Nomascus leucogenys (Northern white-cheeked gibbon) (4) | | | | | | | | | | | +--Platyrrhini (14) | | | | | | | | | | | +--Aotidae (3) | | | | | | | | | | | | | +--Aotus nancymaae (Ma's night monkey) (3) | | | | | | | | | | | +--Cebidae (11) | | | | | | | | | | | +--Saimiriinae (3) | | | | | | | | | | | | | +--Saimiri boliviensis boliviensis (Bolivian squirrel monkey) (3) | | | | | | | | | | | +--Cebinae (4) | | | | | | | | | | | | | +--Cebus apella (Tufted capuchin) (4) | | | | | | | | | | | +--Callitrichinae (4) | | | | | | | | | | | +--Callithrix jacchus (white-tufted-ear marmoset) (4) | | | | | | | | | +--Strepsirrhini (15) | | | | | | | | | +--Lemuriformes (13) | | | | | | | | | | | +--Indriidae (5) | | | | | | | | | | | | | +--Propithecus coquereli (Coquerel's sifaka) (5) | | | | | | | | | | | +--Cheirogaleidae (8) | | | | | | | | | | | +--Microcebus murinus (gray mouse lemur) (8) | | | | | | | | | +--Lorisiformes (2) | | | | | | | | | +--Galagidae (2) | | | | | | | | | +--Otolemur garnettii (small-eared galago) (2) | | | | | | | +--Scandentia (1) | | | | | | | | | +--Tupaiidae (1) | | | | | | | | | +--Tupaia chinensis (Chinese tree shrew) (1) | | | | | | | +--Glires (79) | | | | | | | +--Rodentia (73) | | | | | | | | | +--Hystricognathi (13) | | | | | | | | | | | +--Chinchillidae (2) | | | | | | | | | | | | | +--Chinchilla lanigera (2) | | | | | | | | | | | +--Caviidae (2) | | | | | | | | | | | | | +--Cavia porcellus (Domestic guinea pig) (2) | | | | | | | | | | | +--Bathyergidae (7) | | | | | | | | | | | | | +--Fukomys damarensis (Damara mole-rat) (3) | | | | | | | | | | | | | +--Heterocephalus glaber (naked mole-rat) (4) | | | | | | | | | | | +--Octodontidae (2) | | | | | | | | | | | +--Octodon degus (degu) (2) | | | | | | | | | +--Sciurognathi (60) | | | | | | | | | +--Sciuridae (24) | | | | | | | | | | | +--Xerinae (19) | | | | | | | | | | | | | +--Marmotini (19) | | | | | | | | | | | | | +--Marmota marmota marmota (Alpine marmot) (3) | | | | | | | | | | | | | +--Spermophilus tridecemlineatus (thirteen-lined ground squirrel) (4) | | | | | | | | | | | | | +--Spermophilus parryii (Arctic ground squirrel) (3) | | | | | | | | | | | | | +--Spermophilus dauricus (Daurian ground squirrel) (6) | | | | | | | | | | | | | +--Marmota monax (woodchuck) (3) | | | | | | | | | | | +--Sciurinae (5) | | | | | | | | | | | +--Sciurini (5) | | | | | | | | | | | +--Sciurus carolinensis (gray squirrel) (3) | | | | | | | | | | | +--Sciurus vulgaris (Eurasian red squirrel) (2) | | | | | | | | | +--Muroidea (27) | | | | | | | | | | | +--Spalacidae (8) | | | | | | | | | | | | | +--Spalacinae (8) | | | | | | | | | | | | | +--Nannospalax galili (Upper Galilee mountains blind mole rat) (8) | | | | | | | | | | | +--Muridae (8) | | | | | | | | | | | | | +--Murinae (8) | | | | | | | | | | | | | +--Rattus norvegicus (Norway rat) (4) | | | | | | | | | | | | | +--Mus (4) | | | | | | | | | | | | | +--Mus spicilegus (steppe mouse) (2) | | | | | | | | | | | | | +--Mus musculus (house mouse) (2) | | | | | | | | | | | +--Cricetidae (11) | | | | | | | | | | | +--Arvicolinae (2) | | | | | | | | | | | | | +--Microtus ochrogaster (prairie vole) (2) | | | | | | | | | | | +--Cricetinae (7) | | | | | | | | | | | | | +--Cricetulus griseus (Chinese hamster) (3) | | | | | | | | | | | | | +--Mesocricetus auratus (golden hamster) (4) | | | | | | | | | | | +--Neotominae (2) | | | | | | | | | | | +--Neotoma lepida (desert woodrat) (1) | | | | | | | | | | | +--Peromyscus maniculatus bairdii (prairie deer mouse) (1) | | | | | | | | | +--Heteromyidae (2) | | | | | | | | | | | +--Dipodomyinae (2) | | | | | | | | | | | +--Dipodomys ordii (Ord's kangaroo rat) (2) | | | | | | | | | +--Dipodidae (5) | | | | | | | | | | | +--Dipodinae (5) | | | | | | | | | | | +--Jaculus jaculus (lesser Egyptian jerboa) (5) | | | | | | | | | +--Castoridae (2) | | | | | | | | | +--Castor canadensis (American beaver) (2) | | | | | | | +--Lagomorpha (6) | | | | | | | +--Leporidae (6) | | | | | | | +--Oryctolagus cuniculus (rabbit) (6) | | | | | +--Laurasiatheria (195) | | | | | +--Carnivora (48) | | | | | | | +--Feliformia (18) | | | | | | | | | +--Herpestidae (2) | | | | | | | | | | | +--Suricata suricatta (meerkat) (2) | | | | | | | | | +--Hyaenidae (2) | | | | | | | | | | | +--Crocuta crocuta (spotted hyena) (2) | | | | | | | | | +--Felidae (14) | | | | | | | | | +--Pantherinae (4) | | | | | | | | | | | +--Panthera tigris altaica (Amur tiger) (2) | | | | | | | | | | | +--Panthera leo (lion) (2) | | | | | | | | | +--Felinae (8) | | | | | | | | | | | +--Puma concolor (puma) (2) | | | | | | | | | | | +--Felis catus (domestic cat) (2) | | | | | | | | | | | +--Lynx pardinus (Spanish lynx) (2) | | | | | | | | | | | +--Lynx canadensis (Canada lynx) (2) | | | | | | | | | +--Acinonychinae (2) | | | | | | | | | +--Acinonyx jubatus (cheetah) (2) | | | | | | | +--Caniformia (30) | | | | | | | +--Otariidae (2) | | | | | | | | | +--Callorhinus ursinus (northern fur seal) (2) | | | | | | | +--Phocidae (3) | | | | | | | | | +--Monachus schauinslandi (Hawaiian monk seal) (2) | | | | | | | | | +--Leptonychotes weddellii (Weddell seal) (1) | | | | | | | +--Mustelidae (8) | | | | | | | | | +--Martinae (2) | | | | | | | | | | | +--Gulo gulo (wolverine) (2) | | | | | | | | | +--Lutrinae (2) | | | | | | | | | | | +--Enhydra lutris kenyoni (2) | | | | | | | | | +--Mustelinae (4) | | | | | | | | | +--Neovison vison (2) | | | | | | | | | +--Mustela putorius furo (domestic ferret) (2) | | | | | | | +--Ursidae (7) | | | | | | | | | +--Ursus americanus (American black bear) (2) | | | | | | | | | +--Ailuropoda melanoleuca (giant panda) (3) | | | | | | | | | +--Ursus maritimus (polar bear) (2) | | | | | | | +--Canidae (8) | | | | | | | | | +--Canis lupus dingo (dingo) (2) | | | | | | | | | +--Vulpes vulpes (red fox) (2) | | | | | | | | | +--Nyctereutes procyonoides (raccoon dog) (2) | | | | | | | | | +--Canis lupus familiaris (dog) (2) | | | | | | | +--Odobenidae (2) | | | | | | | +--Odobenus rosmarus divergens (Pacific walrus) (2) | | | | | +--Cetartiodactyla (106) | | | | | | | +--Tylopoda (12) | | | | | | | | | +--Camelidae (12) | | | | | | | | | +--Vicugna pacos (alpaca) (3) | | | | | | | | | +--Camelus dromedarius (Arabian camel) (3) | | | | | | | | | +--Camelus ferus (Wild Bactrian camel) (3) | | | | | | | | | +--Camelus bactrianus (Bactrian camel) (3) | | | | | | | +--Cetacea (50) | | | | | | | | | +--Odontoceti (37) | | | | | | | | | | | +--Monodontidae (10) | | | | | | | | | | | | | +--Monodon monoceros (narwhal) (5) | | | | | | | | | | | | | +--Delphinapterus leucas (beluga whale) (5) | | | | | | | | | | | +--Phocoenidae (5) | | | | | | | | | | | | | +--Phocoena sinus (vaquita) (5) | | | | | | | | | | | +--Physeteridae (7) | | | | | | | | | | | | | +--Physeter catodon (sperm whale) (7) | | | | | | | | | | | +--Lipotidae (5) | | | | | | | | | | | | | +--Lipotes vexillifer (Yangtze River dolphin) (5) | | | | | | | | | | | +--Delphinidae (10) | | | | | | | | | | | +--Sousa chinensis (Indo-pacific humpbacked dolphin) (5) | | | | | | | | | | | +--Tursiops truncatus (bottlenosed dolphin) (5) | | | | | | | | | +--Mysticeti (13) | | | | | | | | | +--Balaenopteridae (10) | | | | | | | | | | | +--Balaenoptera musculus (Blue whale) (5) | | | | | | | | | | | +--Balaenoptera physalus (Fin whale) (5) | | | | | | | | | +--Eschrichtiidae (3) | | | | | | | | | +--Eschrichtius robustus (grey whale) (3) | | | | | | | +--Ruminantia (37) | | | | | | | | | +--Pecora (37) | | | | | | | | | +--Bovidae (27) | | | | | | | | | | | +--Caprinae (8) | | | | | | | | | | | | | +--Capra hircus (goat) (4) | | | | | | | | | | | | | +--Ovis aries (sheep) (4) | | | | | | | | | | | +--Bovinae (19) | | | | | | | | | | | +--Bos grunniens (domestic yak) (4) | | | | | | | | | | | +--Bos indicus (3) | | | | | | | | | | | +--Bos (4) | | | | | | | | | | | | | +--Bos indicus x Bos taurus (hybrid cattle) (4) | | | | | | | | | | | +--Bos taurus (cattle) (4) | | | | | | | | | | | +--Bos grunniens mutus (4) | | | | | | | | | +--Moschidae (3) | | | | | | | | | | | +--Moschus moschiferus (Siberian musk deer) (3) | | | | | | | | | +--Cervidae (7) | | | | | | | | | +--Odocoileinae (1) | | | | | | | | | | | +--Odocoileus virginianus texanus (1) | | | | | | | | | +--Muntiacinae (2) | | | | | | | | | | | +--Muntiacus reevesi (Chinese muntjac) (2) | | | | | | | | | +--Cervinae (4) | | | | | | | | | +--Cervus elaphus yarkandensis (2) | | | | | | | | | +--Cervus elaphus hippelaphus (2) | | | | | | | +--Suina (7) | | | | | | | +--Tayassuidae (4) | | | | | | | | | +--Catagonus wagneri (Chacoan peccary) (4) | | | | | | | +--Suidae (3) | | | | | | | +--Sus scrofa (pig) (3) | | | | | +--Insectivora (2) | | | | | | | +--Talpidae (2) | | | | | | | +--Galemys pyrenaicus (2) | | | | | +--Chiroptera (36) | | | | | | | +--Microchiroptera (33) | | | | | | | | | +--Rhinolophidae (2) | | | | | | | | | | | +--Rhinolophinae (2) | | | | | | | | | | | +--Rhinolophus ferrumequinum (greater horseshoe bat) (2) | | | | | | | | | +--Phyllostomidae (3) | | | | | | | | | | | +--Phyllostominae (3) | | | | | | | | | | | +--Phyllostomus discolor (pale spear-nosed bat) (3) | | | | | | | | | +--Molossidae (2) | | | | | | | | | | | +--Molossus molossus (Pallas's mastiff bat) (2) | | | | | | | | | +--Vespertilionidae (26) | | | | | | | | | +--Myotis lucifugus (little brown bat) (4) | | | | | | | | | +--Eptesicus nilssoni (northern bat) (4) | | | | | | | | | +--Myotis davidii (4) | | | | | | | | | +--Pipistrellus kuhlii (Kuhl's pipistrelle) (5) | | | | | | | | | +--Myotis myotis (4) | | | | | | | | | +--Myotis brandtii (5) | | | | | | | +--Megachiroptera (3) | | | | | | | +--Pteropodidae (3) | | | | | | | +--Pteropodinae (3) | | | | | | | +--Rousettus aegyptiacus (Egyptian rousette) (1) | | | | | | | +--Pteropus vampyrus (large flying fox) (1) | | | | | | | +--Pteropus alecto (black flying fox) (1) | | | | | +--Perissodactyla (3) | | | | | +--Equidae (2) | | | | | | | +--Equus caballus (horse) (1) | | | | | | | +--Equus asinus (ass) (1) | | | | | +--Rhinocerotidae (1) | | | | | +--Diceros bicornis minor (1) | | | +--Testudines (3) | | | | | +--Cryptodira (3) | | | | | +--Chelonioidea (2) | | | | | | | +--Cheloniidae (2) | | | | | | | +--Chelonia mydas (green seaturtle) (2) | | | | | +--Testudinoidea (1) | | | | | +--Chelydridae (1) | | | | | +--Chelydra serpentina (snapping turtle) (1) | | | +--Archosauria (13) | | | +--Dinosauria (10) | | | | | +--Saurischia (10) | | | | | +--Theropoda (10) | | | | | +--Coelurosauria (10) | | | | | +--Aves (10) | | | | | +--Palaeognathae (10) | | | | | +--Struthioniformes (1) | | | | | | | +--Struthionidae (1) | | | | | | | +--Struthio camelus australis (1) | | | | | +--Casuariiformes (1) | | | | | | | +--Dromaiidae (1) | | | | | | | +--Dromaius novaehollandiae (emu) (1) | | | | | +--Apterygiformes (2) | | | | | | | +--Apterygidae (2) | | | | | | | +--Apteryx owenii (little spotted kiwi) (1) | | | | | | | +--Apteryx australis mantelli (1) | | | | | +--Tinamiformes (6) | | | | | +--Tinamidae (6) | | | | | +--Nothoprocta perdicaria (1) | | | | | +--Nothoprocta ornata (1) | | | | | +--Crypturellus undulatus (1) | | | | | +--Tinamus guttatus (1) | | | | | +--Crypturellus soui (1) | | | | | +--Eudromia elegans (elegant crested-tinamou) (1) | | | +--Crocodylidae (3) | | | +--Crocodylinae (1) | | | | | +--Crocodylus porosus (Australian saltwater crocodile) (1) | | | +--Alligatorinae (2) | | | +--Alligator mississippiensis (American alligator) (1) | | | +--Alligator sinensis (Chinese alligator) (1) | +--Opisthokonta (29) | +--Metazoa (29) | +--Eumetazoa (29) | +--Bilateria (29) | +--Deuterostomia (29) | +--Chordata (29) | +--Craniata (29) | +--Vertebrata (29) | +--Gnathostomata (29) | +--Teleostomi (29) | +--Euteleostomi (29) | +--Sarcopterygii (29) | +--Dipnotetrapodomorpha (29) | +--Tetrapoda (29) | +--Amniota (29) | +--Sauropsida (3) | | | +--Sauria (3) | | | +--Archelosauria (3) | | | +--Testudinata (1) | | | | | +--Testudines (1) | | | | | +--Cryptodira (1) | | | | | +--Durocryptodira (1) | | | | | +--Testudinoidea (1) | | | | | +--Emydidae (1) | | | | | +--Terrapene (1) | | | | | +--Terrapene carolina triunguis (three-toed box turtle) (1) | | | +--Archosauria (2) | | | +--Dinosauria (2) | | | +--Saurischia (2) | | | +--Theropoda (2) | | | +--Coelurosauria (2) | | | +--Aves (2) | | | +--Palaeognathae (1) | | | | | +--Tinamiformes (1) | | | | | +--Tinamidae (1) | | | | | +--Nothocercus julius (1) | | | +--Neognathae (1) | | | +--Galloanserae (1) | | | +--Galliformes (1) | | | +--Odontophoridae (1) | | | +--Odontophorus gujanensis (marbled wood quail) (1) | +--Mammalia (26) | +--Theria (26) | +--Eutheria (26) | +--Afrotheria (1) | | | +--Tubulidentata (1) | | | +--Orycteropodidae (1) | | | +--Orycteropus (1) | | | +--Orycteropus afer afer (1) | +--Boreoeutheria (25) | +--Euarchontoglires (16) | | | +--Primates (16) | | | +--Haplorrhini (12) | | | | | +--Simiiformes (3) | | | | | | | +--Platyrrhini (3) | | | | | | | +--Cebidae (3) | | | | | | | +--Cebinae (3) | | | | | | | +--Cebus imitator (Panamanian white-faced capuchin) (3) | | | | | +--Tarsiiformes (9) | | | | | +--Tarsiidae (9) | | | | | +--Carlito syrichta (Philippine tarsier) (9) | | | +--Strepsirrhini (4) | | | +--Lemuriformes (4) | | | +--Lemuridae (4) | | | +--Prolemur simus (greater bamboo lemur) (4) | +--Laurasiatheria (9) | +--Artiodactyla (9) | +--Whippomorpha (5) | | | +--Cetacea (5) | | | +--Odontoceti (5) | | | +--Phocoenidae (5) | | | +--Neophocaena (5) | | | +--Neophocaena asiaeorientalis asiaeorientalis (yangtze finless porpoise) (5) | +--Ruminantia (4) | +--Pecora (4) | +--Bovidae (4) | +--Bovinae (4) | +--Bison (4) | +--Bison bison bison (north american plains bison) (4)