# Species tree for RF00018 # Generated from Rfam version 15.00 | +--Eukaryota (10) | | | +--Metazoa (8) | | | | | +--Chordata (6) | | | | | | | +--Craniata (6) | | | | | | | +--Vertebrata (6) | | | | | | | +--Euteleostomi (6) | | | | | | | +--Actinopterygii (1) | | | | | | | | | +--Neopterygii (1) | | | | | | | | | +--Teleostei (1) | | | | | | | | | +--Euteleostei (1) | | | | | | | | | +--Neoteleostei (1) | | | | | | | | | +--Acanthomorpha (1) | | | | | | | | | +--Acanthopterygii (1) | | | | | | | | | +--Percomorpha (1) | | | | | | | | | +--Synbranchiformes (1) | | | | | | | | | +--Mastacembelidae (1) | | | | | | | | | +--Mastacembelus armatus (1) | | | | | | | +--Amphibia (1) | | | | | | | | | +--Batrachia (1) | | | | | | | | | +--Anura (1) | | | | | | | | | +--Mesobatrachia (1) | | | | | | | | | +--Pelobatoidea (1) | | | | | | | | | +--Megophryidae (1) | | | | | | | | | +--Leptobrachium leishanense (Leishan spiny toad) (1) | | | | | | | +--Archosauria (4) | | | | | | | +--Dinosauria (4) | | | | | | | +--Saurischia (4) | | | | | | | +--Theropoda (4) | | | | | | | +--Coelurosauria (4) | | | | | | | +--Aves (4) | | | | | | | +--Neognathae (4) | | | | | | | +--Passeriformes (3) | | | | | | | | | +--Corvoidea (1) | | | | | | | | | | | +--Irenidae (1) | | | | | | | | | | | +--Chloropsis hardwickii (1) | | | | | | | | | +--Sittidae (1) | | | | | | | | | | | +--Tichodroma muraria (1) | | | | | | | | | +--Timaliidae (1) | | | | | | | | | +--Pteruthius melanotis (1) | | | | | | | +--Musophagiformes (1) | | | | | | | +--Musophagidae (1) | | | | | | | +--Corythaeola cristata (great blue turaco) (1) | | | | | +--Arthropoda (2) | | | | | +--Hexapoda (2) | | | | | +--Insecta (2) | | | | | +--Pterygota (2) | | | | | +--Neoptera (2) | | | | | +--Endopterygota (1) | | | | | | | +--Coleoptera (1) | | | | | | | +--Polyphaga (1) | | | | | | | +--Cucujiformia (1) | | | | | | | +--Curculionidae (1) | | | | | | | +--Scolytinae (1) | | | | | | | +--Dendroctonus ponderosae (mountain pine beetle) (1) | | | | | +--Paraneoptera (1) | | | | | +--Hemiptera (1) | | | | | +--Euhemiptera (1) | | | | | +--Heteroptera (1) | | | | | +--Panheteroptera (1) | | | | | +--Cimicomorpha (1) | | | | | +--Reduviidae (1) | | | | | +--Triatominae (1) | | | | | +--Rhodnius prolixus (1) | | | +--Viridiplantae (1) | | | | | +--Streptophyta (1) | | | | | +--Embryophyta (1) | | | | | +--Tracheophyta (1) | | | | | +--Spermatophyta (1) | | | | | +--Magnoliophyta (1) | | | | | +--Liliopsida (1) | | | | | +--Poales (1) | | | | | +--Poaceae (1) | | | | | +--BEPclade (1) | | | | | +--Ehrhartoideae (1) | | | | | +--Oryzeae (1) | | | | | +--Oryza sativa Indica Group (1) | | | +--Opisthokonta (1) | | | +--Fungi (1) | | | +--Dikarya (1) | | | +--Ascomycota (1) | | | +--saccharomyceta (1) | | | +--Pezizomycotina (1) | | | +--leotiomyceta (1) | | | +--sordariomyceta (1) | | | +--Sordariomycetes (1) | | | +--Hypocreomycetidae (1) | | | +--Hypocreales (1) | | | +--Cordycipitaceae (1) | | | +--Beauveria (1) | | | +--Beauveria bassiana D1-5 (1) | +--Bacteria (267) | | | +--Proteobacteria (185) | | | | | +--Alphaproteobacteria (2) | | | | | | | +--Rhizobiales (1) | | | | | | | | | +--Phyllobacteriaceae (1) | | | | | | | | | +--Phyllobacterium myrsinacearum (1) | | | | | | | +--Rhodospirillales (1) | | | | | | | +--Rhodospirillaceae (1) | | | | | | | +--Skermanella (1) | | | | | | | +--Skermanella stibiiresistens SB22 (1) | | | | | +--Gammaproteobacteria (183) | | | | | +--Alteromonadales (3) | | | | | | | +--Shewanellaceae (1) | | | | | | | | | +--Shewanella denitrificans OS217 (1) | | | | | | | +--Alteromonadaceae (2) | | | | | | | +--Agarivorans (2) | | | | | | | +--Agarivorans albus MKT 106 (2) | | | | | +--Vibrionales (88) | | | | | | | +--Vibrionaceae (88) | | | | | | | +--Vibrio palustris (1) | | | | | | | +--Photobacterium jeanii (3) | | | | | | | +--Vibrio sp. R-40493 (2) | | | | | | | +--Vibrio sp. G21 (2) | | | | | | | +--Vibrio furnissii (2) | | | | | | | +--Photobacterium lipolyticum (3) | | | | | | | +--Vibrio sp. qd031 (1) | | | | | | | +--Vibrio navarrensis (3) | | | | | | | +--Vibrio caribbenthicus ATCC BAA-2122 (1) | | | | | | | +--Photobacterium profundum SS9 (4) | | | | | | | +--Enterovibrio coralii (2) | | | | | | | +--Photobacterium sp. Gung47 (5) | | | | | | | +--Vibrio sp. S2757 (3) | | | | | | | +--Vibrio cholerae O1 biovar El Tor str. N16961 (1) | | | | | | | +--Vibrio nigripulchritudo (2) | | | | | | | +--Vibrio nereis (3) | | | | | | | +--Photobacterium proteolyticum (4) | | | | | | | +--Photobacterium ganghwense (4) | | | | | | | +--Vibrio renipiscarius (2) | | | | | | | +--Vibrio sp. F10 (3) | | | | | | | +--Salinivibrio sp. KP-1 (1) | | | | | | | +--Vibrio fischeri ES114 (2) | | | | | | | +--Photobacterium halotolerans (3) | | | | | | | +--Vibrio ishigakensis (3) | | | | | | | +--Vibrio parahaemolyticus RIMD 2210633 (3) | | | | | | | +--Photobacterium sp. CECT 7614 (5) | | | | | | | +--Vibrio (12) | | | | | | | | | +--Vibrio rumoiensis 1S-45 (1) | | | | | | | | | +--Vibrioharveyigroup (2) | | | | | | | | | | | +--Vibrio azureus NBRC 104587 (2) | | | | | | | | | +--Vibrio ezurae NBRC 102218 (2) | | | | | | | | | +--Vibrio aerogenes CECT 7868 (1) | | | | | | | | | +--Vibrio proteolyticus NBRC 13287 (3) | | | | | | | | | +--Vibrio genomosp. F6 str. FF-238 (3) | | | | | | | +--Grimontia hollisae CIP 101886 (1) | | | | | | | +--Enterovibrio sp. sw014 (1) | | | | | | | +--Photobacterium aquimaris (3) | | | | | | | +--Photobacterium damselae subsp. damselae CIP 102761 (3) | | | | | +--Enterobacterales (20) | | | | | | | +--Yersiniaceae (4) | | | | | | | | | +--Serratia sp. DD3 (1) | | | | | | | | | +--Ewingella (1) | | | | | | | | | | | +--Ewingella americana ATCC 33852 (1) | | | | | | | | | +--Rahnella (1) | | | | | | | | | | | +--Rahnella aquatilis CIP 78.65 = ATCC 33071 (1) | | | | | | | | | +--Chania (1) | | | | | | | | | +--Chania multitudinisentens RB-25 (1) | | | | | | | +--Pectobacteriaceae (2) | | | | | | | | | +--Sodalis praecaptivus (1) | | | | | | | | | +--Sodalis sp. TME1 (1) | | | | | | | +--Enterobacteriaceae (7) | | | | | | | | | +--Klebsiella sp. RIT-PI-d (1) | | | | | | | | | +--Escherichia (1) | | | | | | | | | | | +--Escherichia vulneris NBRC 102420 (1) | | | | | | | | | +--unclassifiedEnterobacteriaceae (1) | | | | | | | | | | | +--Enterobacteriaceae bacterium strain FGI 57 (1) | | | | | | | | | +--Klebsiella michiganensis (1) | | | | | | | | | +--Mangrovibacter sp. MFB070 (1) | | | | | | | | | +--Buttiauxella (1) | | | | | | | | | | | +--Buttiauxella agrestis ATCC 33320 (1) | | | | | | | | | +--Atlantibacter (1) | | | | | | | | | +--Atlantibacter hermannii NBRC 105704 (1) | | | | | | | +--unclassifiedEnterobacterales (2) | | | | | | | | | +--Plesiomonas (2) | | | | | | | | | +--Plesiomonas shigelloides 302-73 (2) | | | | | | | +--Erwiniaceae (4) | | | | | | | | | +--Erwinia iniecta (1) | | | | | | | | | +--Erwinia sp. Leaf53 (1) | | | | | | | | | +--Tatumella (1) | | | | | | | | | | | +--Tatumella ptyseos ATCC 33301 (1) | | | | | | | | | +--Erwinia gerundensis (1) | | | | | | | +--Hafniaceae (1) | | | | | | | +--Hafnia (1) | | | | | | | +--Hafnia alvei FB1 (1) | | | | | +--Aeromonadales (10) | | | | | | | +--Aeromonadaceae (10) | | | | | | | +--Tolumonas auensis DSM 9187 (1) | | | | | | | +--Oceanimonas doudoroffii (2) | | | | | | | +--Oceanimonas sp. GK1 (1) | | | | | | | +--Aeromonas simiae (2) | | | | | | | +--Oceanisphaera sp. V1-41 (2) | | | | | | | +--Aeromonas hydrophila subsp. hydrophila ATCC 7966 (2) | | | | | +--Enterobacteriales (62) | | | | | +--primary endosymbiont of Sitophilus oryzae (1) | | | | | +--Enterobacteriaceae (61) | | | | | +--Serratia fonticola (1) | | | | | +--Brenneria rubrifaciens (1) | | | | | +--Dickeya dadantii 3937 (1) | | | | | +--Shigella boydii CDC 3083-94 (1) | | | | | +--Sodalis glossinidius str. 'morsitans' (1) | | | | | +--Cedecea neteri (1) | | | | | +--Leminorella richardii (1) | | | | | +--Serratia sp. ATCC 39006 (1) | | | | | +--Salmonella (1) | | | | | | | +--Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1) | | | | | +--Escherichia coli 55989 (1) | | | | | +--Trabulsiella odontotermitis (1) | | | | | +--Pantoea ananatis LMG 20103 (1) | | | | | +--Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- (1) | | | | | +--Pectobacterium atrosepticum SCRI1043 (1) | | | | | +--Escherichia coli E24377A (1) | | | | | +--Escherichia coli O157:H7 (1) | | | | | +--Serratia rubidaea (1) | | | | | +--Salmonella enterica subsp. arizonae (1) | | | | | +--Escherichia coli K-12 (1) | | | | | +--Biostraticola tofi (1) | | | | | +--Pantoea agglomerans (1) | | | | | +--Pantoea vagans (1) | | | | | +--Shigella dysenteriae Sd197 (1) | | | | | +--Yersinia ruckeri (1) | | | | | +--Escherichia coli O83:H1 str. NRG 857C (1) | | | | | +--Serratia odorifera DSM 4582 (1) | | | | | +--aphidsecondarysymbionts (2) | | | | | | | +--Candidatus Regiella insecticola R5.15 (1) | | | | | | | +--Candidatus Regiella insecticola LSR1 (1) | | | | | +--Shigella sonnei Ss046 (1) | | | | | +--Escherichia coli O127:H6 str. E2348/69 (1) | | | | | +--Kluyvera cryocrescens (1) | | | | | +--Gibbsiella quercinecans (1) | | | | | +--Erwinia tasmaniensis (1) | | | | | +--Tatumella morbirosei (1) | | | | | +--Budvicia aquatica (1) | | | | | +--Enterobacter sp. 638 (1) | | | | | +--Enterobacter gergoviae (1) | | | | | +--Citrobacter freundii (1) | | | | | +--Escherichia coli HS (1) | | | | | +--Escherichia coli APEC O1 (1) | | | | | +--Escherichia coli BL21(DE3) (1) | | | | | +--Enterobacter (1) | | | | | | | +--Enterobacter cloacae SCF1 (1) | | | | | +--Serratia ficaria (1) | | | | | +--Citrobacter koseri ATCC BAA-895 (1) | | | | | +--Escherichia coli CFT073 (1) | | | | | +--Erwinia billingiae (1) | | | | | +--Shigella flexneri 2a str. 301 (1) | | | | | +--Yersinia pestis CO92 (1) | | | | | +--Brenneria goodwinii (1) | | | | | +--Edwardsiella hoshinae (1) | | | | | +--Cronobacter sakazakii ATCC BAA-894 (1) | | | | | +--Candidatus Erwinia dacicola (1) | | | | | +--Erwinia mallotivora (1) | | | | | +--Serratia (1) | | | | | | | +--Serratia symbiotica str. Tucson (1) | | | | | +--Citrobacter rodentium ICC168 (1) | | | | | +--Erwinia tracheiphila (1) | | | | | +--Escherichia coli S88 (1) | | | | | +--Escherichia blattae DSM 4481 (1) | | | | | +--Salmonella enterica subsp. enterica serovar Poona (1) | | | | | +--Klebsiella pneumoniae subsp. ozaenae (1) | | | | | +--Lonsdalea quercina (1) | | | +--Firmicutes (2) | | | | | +--Bacillales (2) | | | | | +--Bacillaceae (2) | | | | | +--Bacillus fortis (2) | | | +--Pseudomonadota (80) | | | +--Gammaproteobacteria (80) | | | +--Alteromonadales (16) | | | | | +--Moritellaceae (2) | | | | | | | +--Moritella (2) | | | | | | | +--Moritella sp. Urea-trap-13 (2) | | | | | +--Alteromonadalesgeneraincertaesedis (7) | | | | | | | +--Motilimonas pumila (7) | | | | | +--Ferrimonadaceae (1) | | | | | | | +--Ferrimonas sediminicola (1) | | | | | +--Psychromonadaceae (5) | | | | | | | +--Corallincola holothuriorum (2) | | | | | | | +--Psychromonas (3) | | | | | | | +--Psychromonas sp. B3M02 (1) | | | | | | | +--Psychromonas sp. RZ22 (2) | | | | | +--Alteromonadaceae (1) | | | | | +--Alginatibacterium sediminis (1) | | | +--Vibrionales (30) | | | | | +--Vibrionaceae (30) | | | | | +--Vibrio thalassae (2) | | | | | +--Vibrio viridaestus (1) | | | | | +--Vibrio ziniensis (2) | | | | | +--Vibrio eleionomae (1) | | | | | +--Vibrio agarilyticus (1) | | | | | +--Vibrio toranzoniae (3) | | | | | +--Vibrio ostreae (3) | | | | | +--Veronia nyctiphanis (1) | | | | | +--Vibrio paucivorans (2) | | | | | +--Vibrio aquimaris (1) | | | | | +--Vibrio astriarenae (1) | | | | | +--Vibrio (10) | | | | | | | +--Vibrio sp. 99-8-1 (2) | | | | | | | +--Vibrio tapetis subsp. tapetis (3) | | | | | | | +--Vibrio sp. V28_P6S34P95 (1) | | | | | | | +--Vibrio sp. HA2012 (2) | | | | | | | +--Vibrio sp. 10N.286.49.B3 (2) | | | | | +--Vibrio gelatinilyticus (2) | | | +--Enterobacterales (33) | | | | | +--Yersiniaceae (3) | | | | | | | +--Rouxiella badensis (1) | | | | | | | +--Chimaeribacter arupi (1) | | | | | | | +--Candidatus Fukatsuia symbiotica (1) | | | | | +--Pectobacteriaceae (2) | | | | | | | +--Affinibrenneria salicis (1) | | | | | | | +--Acerihabitans arboris (1) | | | | | +--Enterobacteriaceae (10) | | | | | | | +--Jejubacter calystegiae (1) | | | | | | | +--Kosakonia (1) | | | | | | | | | +--Kosakonia cowanii JCM 10956 = DSM 18146 (1) | | | | | | | +--Tenebrionibacter/Tenebrionicolagroup (1) | | | | | | | | | +--Tenebrionibacter intestinalis (1) | | | | | | | +--Citrobacter (1) | | | | | | | | | +--Citrobacter sp. JGM124 (1) | | | | | | | +--Kluyvera genomosp. 3 (1) | | | | | | | +--Klebsiella/Raoultellagroup (2) | | | | | | | | | +--Klebsiella indica (1) | | | | | | | | | +--Klebsiella (1) | | | | | | | | | +--Klebsiellapneumoniae (1) | | | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae (strain HS11286) (1) | | | | | | | +--Enterobacteriaceae bacterium RIT714 (1) | | | | | | | +--Enterobacteriaceaeincertaesedis (2) | | | | | | | +--ant,tsetse,mealybug,aphid,etc.endosymbionts (2) | | | | | | | +--Symbiopectobacterium (2) | | | | | | | +--Candidatus Symbiopectobacterium sp. Dall1.0 (1) | | | | | | | +--Candidatus Symbiopectobacterium sp. PLON1 (1) | | | | | +--Budviciaceae (1) | | | | | | | +--Limnobaculum parvum (1) | | | | | +--Erwiniaceae (10) | | | | | | | +--Izhakiella capsodis (1) | | | | | | | +--Pantoea alhagi (1) | | | | | | | +--Erwinia sorbitola (1) | | | | | | | +--Erwiniaceae bacterium PD-1 (1) | | | | | | | +--Erwinia (2) | | | | | | | | | +--Erwinia sp. 198 (1) | | | | | | | | | +--Erwinia sp. OLSSP12 (1) | | | | | | | +--Pantoea (3) | | | | | | | | | +--Pantoea sp. M_5 (2) | | | | | | | | | +--Pantoea sp. Eser (1) | | | | | | | +--[Pantoea] beijingensis (1) | | | | | +--Enterobacterales bacterium CwR94 (1) | | | | | +--Hafniaceae (3) | | | | | | | +--Enterobacillus tribolii (3) | | | | | +--Bruguierivoracaceae (3) | | | | | +--Sodalis ligni (1) | | | | | +--Sodalis (2) | | | | | +--Sodalis-like endosymbiont of Proechinophthirus fluctus (1) | | | | | +--Sodalis-like symbiont of Bactericera trigonica (1) | | | +--Aeromonadales (1) | | | +--Aeromonadaceae (1) | | | +--Oceanisphaera avium (1) | +--Plautia stali symbiont (1)