INFERNAL1/a [1.1 | October 2013] NAME tandem-GA DESC Tandem GA/AG loop STATES 289 NODES 87 CLEN 95 W 246 ALPH RNA RF no CONS yes MAP yes DATE Fri May 30 16:16:57 2014 COM [1] /share/data/bin/cmbuild -F /share/data/people/ppg15/motifs/tandem-GA/CM /share/data/people/ppg15/motifs/tandem-GA/SEED COM [2] /share/data/bin/cmcalibrate --mpi --seed 1 /share/data/people/ppg15/motifs/tandem-GA/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 74 EFFN 74.000000 CKSUM 3494244325 NULL 0.000 0.000 0.000 0.000 GA 15.00 EFP7GF -2.9541 0.72812 ECMLC 0.50956 -7.67842 3.13808 1600000 297079 0.004039 ECMGC 0.51044 -7.90311 4.82334 1600000 265003 0.001509 ECMLI 0.51395 -5.31967 4.96337 1600000 236812 0.005067 ECMGI 0.51704 -6.21336 5.89197 1600000 209059 0.001913 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 246 430 -11.372 -11.579 -0.176 -3.130 IL 1 1 2 1 4 1 1 248 432 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 1 248 432 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 1 246 430 -12.114 -0.081 -4.199 -0.650 -2.126 1.558 -2.397 D 4 2 3 5 3 0 0 245 429 -10.626 -0.046 -5.017 IL 5 5 3 5 3 1 1 247 431 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 6 5 3 8 5 1 1 245 429 -11.160 -0.642 -1.482 -11.187 -12.079 -4.454 1.248 -0.263 -0.422 D 7 5 3 8 5 0 0 244 428 -7.538 -3.382 -6.799 -0.217 -5.087 IL 8 8 3 8 5 1 1 246 429 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 141 g c - - MP 9 8 3 13 6 2 2 245 428 -11.592 -11.531 -0.722 -1.351 -10.588 -10.983 -0.368 -3.260 -0.734 -0.394 -1.915 -4.095 1.417 -3.595 0.138 1.792 -0.254 -1.958 1.696 -1.004 -0.455 -0.849 ML 10 8 3 13 6 1 1 244 428 -11.517 -11.863 -0.023 -6.271 -11.712 -9.242 -0.208 -2.331 1.348 -1.359 MR 11 8 3 13 6 1 1 244 428 -9.457 -8.186 -0.188 -8.164 -3.298 -6.378 -3.022 1.844 -3.826 -2.200 D 12 8 3 13 6 0 0 236 420 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 1 244 428 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 1 244 428 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 140 a u - - MP 15 14 6 19 6 2 2 243 427 -3.950 -5.105 -0.145 -10.550 -10.830 -11.225 -3.456 -3.640 -3.647 2.488 -3.613 -4.496 0.216 -1.025 -3.713 0.554 -4.283 -0.177 1.229 1.120 -0.312 -0.848 ML 16 14 6 19 6 1 1 242 426 -11.163 -11.509 -0.029 -5.918 -11.359 -8.888 1.096 -2.442 0.677 -3.646 MR 17 14 6 19 6 1 1 240 424 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 0 234 418 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 1 243 427 -4.954 -0.262 -3.135 -6.873 -7.649 -7.309 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 1 242 426 -4.634 -0.093 -8.145 -6.312 -7.418 0.000 0.000 0.000 0.000 [ MATP 5 ] 6 135 U G - - MP 21 20 6 25 6 2 2 241 425 -12.247 -12.186 -0.002 -10.962 -11.242 -11.637 -9.196 -9.452 -8.520 -0.606 -6.877 -8.670 -0.798 -7.789 -8.620 -5.669 -1.477 -7.812 0.239 -9.039 3.719 -7.424 ML 22 20 6 25 6 1 1 238 422 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 1 238 422 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 232 415 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 1 240 424 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 1 240 424 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 7 134 G A - - MP 27 26 6 31 6 2 2 239 423 -12.247 -12.186 -0.002 -10.962 -11.242 -11.637 -8.449 -7.310 -8.428 -3.617 -8.273 -9.958 -3.947 -8.187 3.969 -3.933 -8.656 -4.653 -4.720 -9.445 -5.910 -7.114 ML 28 26 6 31 6 1 1 236 420 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 1 236 420 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 229 413 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 1 238 422 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 1 238 422 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 8 133 A G - - MP 33 32 6 37 6 2 2 237 421 -12.247 -4.743 -0.071 -6.650 -11.242 -11.637 -8.533 -7.476 3.969 -3.780 -7.975 -9.692 -3.660 -8.124 -8.193 -4.083 -8.668 -4.846 -4.502 -9.381 -5.631 -7.153 ML 34 32 6 37 6 1 1 234 418 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 1 234 417 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 227 411 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 1 236 420 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 1 236 420 -3.968 -0.150 -7.479 -5.647 -6.753 0.000 0.000 0.000 0.000 [ MATP 8 ] 9 131 a g - - MP 39 38 6 43 6 2 2 235 419 -12.233 -12.172 -0.028 -6.906 -6.632 -11.624 -0.675 -3.799 1.590 0.853 -1.579 -1.297 0.784 -4.134 -2.016 0.790 -2.551 0.291 1.560 -1.780 0.156 -2.048 ML 40 38 6 43 6 1 1 232 416 -7.325 -7.672 -0.480 -2.080 -7.521 -5.051 -0.595 1.076 -1.348 -0.257 MR 41 38 6 43 6 1 1 231 415 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 225 408 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 234 418 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 234 418 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 10 130 g c - - MP 45 44 6 49 6 2 2 233 417 -12.221 -12.161 -0.096 -4.163 -11.217 -6.976 -5.146 -2.265 -5.196 2.067 -5.553 -2.723 0.350 -1.981 -5.406 2.550 -5.854 0.522 0.630 -5.210 -0.756 -1.541 ML 46 44 6 49 6 1 1 226 410 -7.182 -7.529 -2.243 -1.937 -7.378 -0.973 -0.457 0.953 -1.197 -0.154 MR 47 44 6 49 6 1 1 229 413 -7.969 -6.698 -2.607 -6.676 -0.361 -4.890 -0.605 1.084 -1.359 -0.264 D 48 44 6 49 6 0 0 222 406 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 232 416 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 232 416 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 11 129 g c - - MP 51 50 6 55 6 2 2 231 415 -12.128 -12.067 -0.003 -10.843 -11.123 -11.518 -6.122 -4.807 -5.956 2.436 -7.009 -6.561 -0.924 -2.395 -0.689 2.644 -6.638 -1.558 0.742 -0.313 -4.149 -4.930 ML 52 50 6 55 6 1 1 224 408 -9.131 -9.477 -4.191 -0.102 -9.327 -6.856 1.069 -1.396 -1.536 0.236 MR 53 50 6 55 6 1 1 228 412 -7.969 -6.698 -2.607 -6.676 -0.361 -4.890 -0.599 -0.774 -1.265 1.226 D 54 50 6 55 6 0 0 220 404 -10.760 -9.459 -5.256 -5.938 -5.955 -0.090 IL 55 55 5 55 6 1 1 230 414 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 230 414 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 12 128 g c - - MP 57 56 6 61 6 2 2 229 413 -12.128 -12.067 -0.018 -10.843 -11.123 -6.535 0.437 -4.757 -5.742 1.924 -1.259 -6.392 -1.291 -2.582 -6.084 2.712 -6.412 -2.476 0.416 -5.657 -3.906 0.690 ML 58 56 6 61 6 1 1 222 406 -9.131 -9.477 -4.191 -1.041 -1.160 -6.856 1.633 -2.554 -0.985 -2.169 MR 59 56 6 61 6 1 1 226 410 -7.969 -6.698 -0.604 -6.676 -1.810 -4.890 -0.510 -1.523 1.275 -0.916 D 60 56 6 61 6 0 0 219 403 -10.760 -9.459 -5.256 -5.938 -5.955 -0.090 IL 61 61 5 61 6 1 1 228 412 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 228 412 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 13 127 g c - - MP 63 62 6 67 4 2 2 227 411 -1.880 -11.451 -1.236 -1.721 -5.811 -1.507 -0.421 1.807 -0.038 -0.433 0.105 -6.328 -6.069 2.790 -6.395 -2.451 -0.875 -0.311 -3.932 -4.747 ML 64 62 6 67 4 1 1 222 406 -5.479 -5.661 -2.228 -0.426 -1.631 -1.602 -2.372 1.657 MR 65 62 6 67 4 1 1 220 404 -6.910 -5.939 -3.806 -0.146 -1.851 -3.111 1.778 -2.499 D 66 62 6 67 4 0 0 218 402 -6.728 -6.409 -4.425 -0.101 IL 67 67 5 67 4 1 1 229 413 -0.792 -2.575 -2.656 -3.381 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 1 229 413 -0.941 -1.078 -7.592 0.000 0.000 0.000 0.000 [ MATL 13 ] 19 - A - - - ML 69 68 6 71 3 1 1 227 411 -11.506 -0.416 -1.999 1.389 -1.147 -0.770 -1.543 D 70 68 6 71 3 0 0 217 401 -12.465 -2.367 -0.311 IL 71 71 3 71 3 1 1 229 413 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 20 - A - - - ML 72 71 3 74 3 1 1 228 412 -11.336 -0.002 -9.990 1.054 -0.454 -0.293 -1.403 D 73 71 3 74 3 0 0 211 395 -12.671 -8.184 -0.005 IL 74 74 3 74 3 1 1 228 412 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 21 - a - - - ML 75 74 3 77 3 1 1 227 411 -11.336 -0.002 -9.990 0.469 -0.584 0.269 -0.429 D 76 74 3 77 3 0 0 211 395 -12.671 -8.184 -0.005 IL 77 77 3 77 3 1 1 227 411 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 22 - A - - - ML 78 77 3 80 3 1 1 226 410 -11.336 -0.002 -9.990 1.992 -7.460 -6.764 -6.917 D 79 77 3 80 3 0 0 211 395 -12.671 -8.184 -0.005 IL 80 80 3 80 3 1 1 226 410 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 23 - G - - - ML 81 80 3 83 3 1 1 225 409 -11.336 -0.002 -9.990 -3.513 -2.322 1.694 -1.065 D 82 80 3 83 3 0 0 211 395 -12.671 -3.568 -0.127 IL 83 83 3 83 3 1 1 225 409 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 24 - U - - - ML 84 83 3 86 3 1 1 224 408 -11.442 -0.002 -10.096 -0.840 -1.915 -3.217 1.618 D 85 83 3 86 3 0 0 208 392 -12.549 -4.882 -0.050 IL 86 86 3 86 3 1 1 224 408 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 25 - A - - - ML 87 86 3 89 3 1 1 223 407 -11.476 -0.002 -10.130 1.992 -7.605 -6.900 -7.048 D 88 86 3 89 3 0 0 207 391 -12.505 -3.465 -0.137 IL 89 89 3 89 3 1 1 223 407 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 26 - a - - - ML 90 89 3 92 3 1 1 222 406 -2.185 -0.360 -10.223 0.948 -1.970 0.135 -0.479 D 91 89 3 92 3 0 0 203 387 -12.374 -7.887 -0.006 IL 92 92 3 92 3 1 1 222 406 -2.503 -0.292 -7.194 0.000 0.000 0.000 0.000 [ MATL 21 ] 29 - a - - - ML 93 92 3 95 3 1 1 221 405 -11.569 -0.002 -10.223 0.632 -1.253 0.286 -0.301 D 94 92 3 95 3 0 0 203 387 -12.374 -3.869 -0.103 IL 95 95 3 95 3 1 1 220 404 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 30 - u - - - ML 96 95 3 98 3 1 1 220 404 -11.628 -0.002 -10.282 0.459 -0.765 -1.070 0.642 D 97 95 3 98 3 0 0 199 383 -12.278 -7.791 -0.007 IL 98 98 3 98 3 1 1 219 403 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 31 - a - - - ML 99 98 3 101 3 1 1 219 403 -11.628 -0.002 -10.282 0.370 -0.635 -0.133 0.204 D 100 98 3 101 3 0 0 198 382 -12.278 -7.791 -0.007 IL 101 101 3 101 3 1 1 218 402 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 32 - a - - - ML 102 101 3 104 3 1 1 218 402 -11.628 -0.002 -10.282 0.573 0.535 -1.596 -0.449 D 103 101 3 104 3 0 0 198 382 -12.278 -7.791 -0.007 IL 104 104 3 104 3 1 1 218 401 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 33 - a - - - ML 105 104 3 107 3 1 1 217 401 -11.628 -0.002 -10.282 0.840 -1.823 -0.110 0.001 D 106 104 3 107 3 0 0 198 382 -12.278 -7.791 -0.007 IL 107 107 3 107 3 1 1 217 400 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 34 - A - - - ML 108 107 3 110 3 1 1 216 400 -11.628 -0.002 -10.282 1.050 -1.328 -2.599 0.450 D 109 107 3 110 3 0 0 198 382 -12.278 -7.791 -0.007 IL 110 110 3 110 3 1 1 216 399 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 35 - u - - - ML 111 110 3 113 3 1 1 215 399 -11.628 -0.002 -10.282 -0.435 -0.288 -0.194 0.649 D 112 110 3 113 3 0 0 197 381 -12.278 -7.791 -0.007 IL 113 113 3 113 3 1 1 215 399 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 36 - U - - - ML 114 113 3 116 3 1 1 214 398 -11.628 -0.002 -10.282 0.165 -3.387 -0.773 1.136 D 115 113 3 116 3 0 0 197 381 -12.278 -7.791 -0.007 IL 116 116 3 116 3 1 1 214 398 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 37 - u - - - ML 117 116 3 119 3 1 1 213 397 -11.628 -0.103 -3.865 -0.601 0.111 -1.005 0.818 D 118 116 3 119 3 0 0 197 381 -12.278 -7.791 -0.007 IL 119 119 3 119 3 1 1 213 397 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 38 - a - - - ML 120 119 3 122 3 1 1 212 396 -1.273 -0.808 -6.065 0.644 -0.169 -1.087 0.107 D 121 119 3 122 3 0 0 197 381 -12.436 -4.018 -0.092 IL 122 122 3 122 3 1 1 212 396 -2.080 -0.396 -8.113 0.000 0.000 0.000 0.000 [ MATL 31 ] 41 - g - - - ML 123 122 3 125 3 1 1 211 395 -11.564 -0.002 -10.218 -0.103 -0.083 0.153 0.017 D 124 122 3 125 3 0 0 195 379 -12.381 -7.894 -0.006 IL 125 125 3 125 3 1 1 211 395 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 42 - a - - - ML 126 125 3 128 3 1 1 210 394 -11.564 -0.002 -10.218 0.958 -1.039 -1.394 0.252 D 127 125 3 128 3 0 0 194 378 -12.381 -7.894 -0.006 IL 128 128 3 128 3 1 1 210 394 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 43 - U - - - ML 129 128 3 131 3 1 1 209 393 -11.564 -0.002 -10.218 -1.766 0.106 -0.810 1.042 D 130 128 3 131 3 0 0 194 378 -12.381 -7.894 -0.006 IL 131 131 3 131 3 1 1 209 393 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 44 - u - - - ML 132 131 3 134 3 1 1 208 392 -11.564 -0.002 -10.218 -0.961 -0.285 -0.235 0.861 D 133 131 3 134 3 0 0 194 378 -12.381 -7.894 -0.006 IL 134 134 3 134 3 1 1 208 392 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 45 - u - - - ML 135 134 3 137 3 1 1 207 391 -11.564 -0.002 -10.218 0.080 -0.712 -0.350 0.631 D 136 134 3 137 3 0 0 194 378 -12.381 -7.894 -0.006 IL 137 137 3 137 3 1 1 207 391 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 46 - C - - - ML 138 137 3 140 3 1 1 206 390 -11.564 -0.026 -5.832 -0.267 1.439 -4.889 -1.240 D 139 137 3 140 3 0 0 194 378 -12.381 -7.894 -0.006 IL 140 140 3 140 3 1 1 206 390 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 47 - A - - - ML 141 140 3 143 3 1 1 205 389 -11.540 -0.002 -10.194 1.827 -5.202 -5.485 -1.314 D 142 140 3 143 3 0 0 194 378 -12.417 -7.930 -0.006 IL 143 143 3 143 3 1 1 205 389 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 48 - G - - - ML 144 143 3 146 3 1 1 204 388 -11.540 -0.002 -10.194 -1.702 -7.001 1.877 -6.289 D 145 143 3 146 3 0 0 194 378 -12.417 -7.930 -0.006 IL 146 146 3 146 3 1 1 204 388 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 49 - A - - - ML 147 146 3 149 3 1 1 203 387 -11.540 -0.466 -1.859 1.939 -2.956 -5.902 -5.669 D 148 146 3 149 3 0 0 194 378 -12.417 -1.731 -0.517 IL 149 149 3 149 3 1 1 206 390 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 50 - G - - - ML 150 149 3 152 3 1 1 205 389 -11.434 -0.002 -10.088 -1.913 -0.808 1.558 -2.191 D 151 149 3 152 3 0 0 170 353 -12.558 -8.071 -0.006 IL 152 152 3 152 3 1 1 205 389 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 51 - A - - - ML 153 152 3 155 3 1 1 204 388 -11.434 -0.002 -10.088 1.279 -1.464 -1.121 -0.413 D 154 152 3 155 3 0 0 168 352 -12.558 -8.071 -0.006 IL 155 155 3 155 3 1 1 204 388 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 52 - G - - - ML 156 155 3 158 3 1 1 203 387 -11.434 -0.002 -10.088 -0.453 -4.022 1.253 -0.279 D 157 155 3 158 3 0 0 167 351 -12.558 -8.071 -0.006 IL 158 158 3 158 3 1 1 203 387 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 53 - c - - - ML 159 158 3 161 3 1 1 202 386 -11.434 -0.002 -10.088 -1.218 0.961 -1.185 0.243 D 160 158 3 161 3 0 0 166 349 -12.558 -8.071 -0.006 IL 161 161 3 161 3 1 1 202 386 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 54 - c - - - ML 162 161 3 164 3 1 1 201 385 -11.434 -0.002 -10.088 -0.645 0.730 -1.635 0.464 D 163 161 3 164 3 0 0 164 348 -12.558 -8.071 -0.006 IL 164 164 3 164 3 1 1 201 385 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 55 - G - - - ML 165 164 3 167 3 1 1 200 384 -11.434 -0.002 -10.088 0.078 -1.318 1.074 -1.188 D 166 164 3 167 3 0 0 163 346 -12.558 -8.071 -0.006 IL 167 167 3 167 3 1 1 200 384 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 56 - g - - - ML 168 167 3 170 3 1 1 199 383 -11.434 -0.002 -10.088 0.320 -1.645 0.995 -1.188 D 169 167 3 170 3 0 0 161 345 -12.558 -8.071 -0.006 IL 170 170 3 170 3 1 1 199 383 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 57 - c - - - ML 171 170 3 173 3 1 1 198 382 -11.434 -0.002 -10.088 -0.345 0.364 -0.191 0.070 D 172 170 3 173 3 0 0 159 343 -12.558 -8.071 -0.006 IL 173 173 3 173 3 1 1 198 382 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 58 - G - - - ML 174 173 3 176 3 1 1 197 381 -11.434 -0.002 -10.088 -3.506 -1.097 1.629 -1.508 D 175 173 3 176 3 0 0 157 341 -12.558 -8.071 -0.006 IL 176 176 3 176 3 1 1 197 381 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 59 - g - - - ML 177 176 3 179 3 1 1 196 380 -11.434 -0.002 -10.088 -0.478 -0.233 0.744 -0.405 D 178 176 3 179 3 0 0 155 339 -12.558 -8.071 -0.006 IL 179 179 3 179 3 1 1 196 380 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 60 - c - - - ML 180 179 3 182 3 1 1 195 379 -11.434 -0.002 -10.088 -0.640 0.725 -2.601 0.624 D 181 179 3 182 3 0 0 153 337 -12.558 -8.071 -0.006 IL 182 182 3 182 3 1 1 195 379 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 61 - u - - - ML 183 182 3 185 3 1 1 194 378 -11.434 -0.002 -10.088 -0.310 0.194 -0.585 0.468 D 184 182 3 185 3 0 0 150 334 -12.558 -8.071 -0.006 IL 185 185 3 185 3 1 1 194 378 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 62 - g - - - ML 186 185 3 188 3 1 1 193 377 -11.434 -0.002 -10.088 -0.697 -0.372 0.570 0.171 D 187 185 3 188 3 0 0 147 331 -12.558 -8.071 -0.006 IL 188 188 3 188 3 1 1 193 377 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 63 - a - - - ML 189 188 3 191 3 1 1 192 376 -11.434 -0.002 -10.088 0.499 -1.023 0.458 -0.472 D 190 188 3 191 3 0 0 142 326 -12.558 -8.071 -0.006 IL 191 191 3 191 3 1 1 192 376 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 64 - u - - - ML 192 191 3 194 3 1 1 191 375 -11.434 -0.002 -10.088 -1.564 0.030 -0.293 0.867 D 193 191 3 194 3 0 0 135 319 -12.558 -8.071 -0.006 IL 194 194 3 194 3 1 1 191 375 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 65 - g - - - ML 195 194 3 197 3 1 1 190 374 -0.276 -2.874 -4.737 -0.136 -1.232 0.873 -0.264 D 196 194 3 197 3 0 0 104 288 -12.558 -8.071 -0.006 IL 197 197 3 197 3 1 1 191 375 -0.144 -3.395 -11.984 0.000 0.000 0.000 0.000 [ MATL 56 ] 94 - a - - - ML 198 197 3 200 3 1 1 42 60 -11.380 -0.002 -10.034 0.903 -0.818 0.333 -1.725 D 199 197 3 200 3 0 0 38 57 -12.622 -4.427 -0.069 IL 200 200 3 200 3 1 1 46 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 95 - a - - - ML 201 200 3 203 3 1 1 41 59 -11.434 -0.002 -10.088 0.846 -1.845 0.349 -0.620 D 202 200 3 203 3 0 0 36 55 -12.558 -8.071 -0.006 IL 203 203 3 203 3 1 1 45 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 96 - u - - - ML 204 203 3 206 3 1 1 40 58 -11.434 -0.002 -10.088 0.147 -0.322 -0.076 0.194 D 205 203 3 206 3 0 0 35 54 -12.558 -8.071 -0.006 IL 206 206 3 206 3 1 1 44 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 97 - u - - - ML 207 206 3 209 3 1 1 39 57 -11.434 -0.002 -10.088 0.289 -0.125 -0.941 0.422 D 208 206 3 209 3 0 0 34 53 -12.558 -8.071 -0.006 IL 209 209 3 209 3 1 1 43 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 98 - u - - - ML 210 209 3 212 3 1 1 38 56 -11.434 -0.002 -10.088 0.316 0.259 -2.511 0.468 D 211 209 3 212 3 0 0 33 52 -12.558 -8.071 -0.006 IL 212 212 3 212 3 1 1 42 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 99 - a - - - ML 213 212 3 215 3 1 1 37 55 -11.434 -0.002 -10.088 0.384 0.142 -0.146 -0.542 D 214 212 3 215 3 0 0 32 51 -12.558 -8.071 -0.006 IL 215 215 3 215 3 1 1 41 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 100 - g - - - ML 216 215 3 218 3 1 1 36 54 -11.434 -0.002 -10.088 -0.680 -0.034 0.723 -0.417 D 217 215 3 218 3 0 0 31 50 -12.558 -8.071 -0.006 IL 218 218 3 218 3 1 1 40 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 101 - u - - - ML 219 218 3 221 3 1 1 35 53 -11.434 -0.002 -10.088 -0.098 -1.313 -0.251 0.866 D 220 218 3 221 3 0 0 30 49 -12.558 -8.071 -0.006 IL 221 221 3 221 3 1 1 39 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 102 - a - - - ML 222 221 3 224 3 1 1 33 52 -11.434 -0.002 -10.088 0.285 -0.394 -0.122 0.140 D 223 221 3 224 3 0 0 29 48 -12.558 -8.071 -0.006 IL 224 224 3 224 3 1 1 38 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 103 - a - - - ML 225 224 3 227 3 1 1 32 51 -11.434 -0.002 -10.088 0.514 -0.086 -0.389 -0.207 D 226 224 3 227 3 0 0 28 47 -12.558 -8.071 -0.006 IL 227 227 3 227 3 1 1 37 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 104 - a - - - ML 228 227 3 230 3 1 1 31 50 -11.434 -0.002 -10.088 0.389 0.010 -0.966 0.228 D 229 227 3 230 3 0 0 27 46 -12.558 -8.071 -0.006 IL 230 230 3 230 3 1 1 36 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 105 - a - - - ML 231 230 3 233 3 1 1 30 49 -11.434 -0.002 -10.088 0.273 0.185 -0.577 -0.023 D 232 230 3 233 3 0 0 26 45 -12.558 -8.071 -0.006 IL 233 233 3 233 3 1 1 35 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 106 - g - - - ML 234 233 3 236 3 1 1 29 48 -11.434 -0.002 -10.088 0.484 -2.001 0.700 -0.459 D 235 233 3 236 3 0 0 25 44 -12.558 -8.071 -0.006 IL 236 236 3 236 3 1 1 34 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 107 - a - - - ML 237 236 3 239 3 1 1 28 47 -11.434 -0.002 -10.088 0.894 -1.474 0.120 -0.525 D 238 236 3 239 3 0 0 24 43 -12.558 -8.071 -0.006 IL 239 239 3 239 3 1 1 33 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 108 - A - - - ML 240 239 3 242 3 1 1 27 46 -11.434 -0.002 -10.088 1.154 -1.939 -0.077 -0.820 D 241 239 3 242 3 0 0 24 42 -12.558 -8.071 -0.006 IL 242 242 3 242 3 1 1 32 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 109 - g - - - ML 243 242 3 245 3 1 1 26 44 -11.434 -0.002 -10.088 -0.025 -0.155 0.356 -0.252 D 244 242 3 245 3 0 0 23 41 -12.558 -8.071 -0.006 IL 245 245 3 245 3 1 1 31 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 110 - g - - - ML 246 245 3 248 3 1 1 25 43 -11.434 -0.002 -10.088 0.100 -0.399 0.139 0.096 D 247 245 3 248 3 0 0 22 41 -12.558 -2.438 -0.295 IL 248 248 3 248 3 1 1 30 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 73 ] 111 - u - - - ML 249 248 3 251 3 1 1 24 42 -11.632 -0.002 -10.286 -0.919 -0.115 -0.378 0.831 D 250 248 3 251 3 0 0 21 39 -12.271 -7.784 -0.007 IL 251 251 3 251 3 1 1 29 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 74 ] 112 - a - - - ML 252 251 3 254 3 1 1 23 41 -11.632 -0.002 -10.286 0.919 -2.031 -0.006 -0.202 D 253 251 3 254 3 0 0 20 39 -12.271 -7.784 -0.007 IL 254 254 3 254 3 1 1 28 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 75 ] 113 - a - - - ML 255 254 3 257 3 1 1 22 40 -11.632 -0.002 -10.286 0.219 0.199 -0.242 -0.248 D 256 254 3 257 3 0 0 20 38 -12.271 -1.750 -0.509 IL 257 257 3 257 3 1 1 27 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 76 ] 114 - g - - - ML 258 257 3 260 3 1 1 20 39 -11.859 -0.001 -10.513 -0.608 -0.662 0.492 0.385 D 259 257 3 260 3 0 0 18 37 -11.771 -4.752 -0.055 IL 260 260 3 260 3 1 1 26 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 77 ] 115 - u - - - ML 261 260 3 263 3 1 1 19 38 -11.875 -0.001 -10.529 -1.144 0.053 0.043 0.566 D 262 260 3 263 3 0 0 17 36 -11.726 -2.711 -0.240 IL 263 263 3 263 3 1 1 25 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 78 ] 116 - G - - - ML 264 263 3 266 3 1 1 18 37 -11.944 -0.001 -10.598 -0.923 -3.214 1.315 -0.189 D 265 263 3 266 3 0 0 16 35 -11.498 -4.176 -0.083 IL 266 266 3 266 3 1 1 24 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 79 ] 117 - A - - - ML 267 266 3 269 3 1 1 17 35 -11.963 -0.001 -10.617 1.035 -4.907 0.483 -0.944 D 268 266 3 269 3 0 0 15 34 -11.428 -6.941 -0.012 IL 269 269 3 269 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 80 ] 118 - A - - - ML 270 269 3 272 3 1 1 16 34 -11.963 -0.001 -10.617 1.638 -6.605 -0.207 -6.519 D 271 269 3 272 3 0 0 14 33 -11.428 -6.941 -0.012 IL 272 272 3 272 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 81 ] 119 - A - - - ML 273 272 3 275 3 1 1 15 33 -11.963 -0.070 -4.411 1.115 -2.088 -0.940 0.107 D 274 272 3 275 3 0 0 13 32 -11.428 -1.017 -0.984 IL 275 275 3 275 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 82 ] 120 - u - - - ML 276 275 3 278 3 1 1 13 32 -12.073 -0.019 -6.317 -0.164 -1.294 -0.013 0.773 D 277 275 3 278 3 0 0 12 31 -10.900 -6.413 -0.018 IL 278 278 3 278 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 83 ] 121 - u - - - ML 279 278 3 281 3 1 1 12 30 -12.055 -0.001 -10.710 -0.798 0.154 0.080 0.327 D 280 278 3 281 3 0 0 11 30 -11.000 -6.513 -0.017 IL 281 281 3 281 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 84 ] 122 - C - - - ML 282 281 3 284 3 1 1 10 29 -12.055 -0.015 -6.641 -1.318 1.306 -1.139 -0.574 D 283 281 3 284 3 0 0 10 28 -11.000 -6.513 -0.017 IL 284 284 3 284 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 85 ] 123 - A - - - ML 285 284 3 287 2 1 1 1 1 * 0.000 1.174 -1.816 0.123 -1.433 D 286 284 3 287 2 0 0 0 0 * 0.000 IL 287 287 3 287 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 86 ] - - - - - - E 288 287 3 -1 0 0 0 0 0 // HMMER3/f [i1.1 | October 2013] NAME tandem-GA DESC Tandem GA/AG loop LENG 95 MAXL 251 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri May 30 16:16:57 2014 COM [1] /share/data/bin/cmbuild -F /share/data/people/ppg15/motifs/tandem-GA/CM /share/data/people/ppg15/motifs/tandem-GA/SEED NSEQ 74 EFFN 72.794067 CKSUM 3494244325 STATS LOCAL MSV -9.2615 0.72812 STATS LOCAL VITERBI -10.6435 0.72812 STATS LOCAL FORWARD -2.4430 0.72812 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.19536 1.70838 1.27340 1.44237 1.38629 1.38629 1.38629 1.38629 0.00296 6.51674 6.51674 1.46634 0.26236 0.00000 * 1 1.83677 2.85899 0.30688 3.04487 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.05821 6.51674 2.89912 1.46634 0.26236 1.09861 0.40547 2 4.45611 0.52154 1.56981 1.67826 2 C - - : 1.38629 1.38629 1.38629 1.38629 0.00276 6.58721 6.58721 1.46634 0.26236 3.66992 0.02581 3 1.78629 1.95425 0.78990 1.44029 3 g - - < 1.38629 1.38629 1.38629 1.38629 0.00276 6.58721 6.58721 1.46634 0.26236 0.05230 2.97678 4 0.89846 2.34789 1.53436 1.26712 4 a - - < 1.38629 1.38629 1.38629 1.38629 0.05582 2.93783 6.63595 0.04882 3.04384 1.09861 0.40547 5 3.14650 3.27169 3.67989 0.11224 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.00263 6.63595 6.63595 1.46634 0.26236 1.09861 0.40547 6 4.94880 5.24154 0.01751 5.30305 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.00263 6.63595 6.63595 1.46634 0.26236 1.09861 0.40547 7 0.01846 5.10287 4.97818 5.23556 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.00263 6.63595 6.63595 1.46634 0.26236 1.09861 0.40547 8 1.07246 1.81942 1.56365 1.25056 9 a - - < 1.38629 1.38629 1.38629 1.38629 0.01292 6.63595 4.46286 1.46634 0.26236 1.09861 0.40547 9 1.28306 2.19979 0.78947 1.84579 10 g - - < 1.38629 1.38629 1.38629 1.38629 0.01927 6.62568 4.03062 1.46634 0.26236 2.37819 0.09730 10 1.04197 3.01442 0.84424 1.78212 11 g - - < 1.38629 1.38629 1.38629 1.38629 0.00270 6.60910 6.60910 1.46634 0.26236 3.14341 0.04409 11 1.04973 2.78128 0.90166 1.70314 12 g - - < 1.38629 1.38629 1.38629 1.38629 0.04496 6.60910 3.15553 1.46634 0.26236 0.97032 0.47636 12 1.26456 1.75753 0.83488 2.19607 13 g - - < 1.38629 1.38629 1.38629 1.38629 0.87760 1.33830 1.13343 0.77420 0.61817 3.82887 0.02197 13 0.42424 2.18040 1.92023 2.45155 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.38373 6.19139 1.14999 1.46634 0.26236 1.49540 0.25381 14 0.65688 1.70094 1.58981 2.35328 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00507 5.98094 5.98094 1.46634 0.26236 5.91130 0.00271 15 1.06124 1.79057 1.20060 1.68149 21 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00507 5.98094 5.98094 1.46634 0.26236 5.91130 0.00271 16 0.00590 6.54046 6.05936 6.16608 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00507 5.98094 5.98094 1.46634 0.26236 5.91130 0.00271 17 3.80476 2.99441 0.21289 2.12510 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00507 5.98094 5.98094 1.46634 0.26236 2.47922 0.08753 18 1.96860 2.71118 3.61075 0.26545 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00471 6.05386 6.05386 1.46634 0.26236 3.40437 0.03379 19 0.00536 6.64184 6.15405 6.25709 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00460 6.07770 6.07770 1.46634 0.26236 2.40795 0.09431 20 0.72982 2.74703 1.29348 1.71716 26 a - - _ 1.38629 1.38629 1.38629 1.38629 0.25139 1.51355 6.14125 0.17840 1.81162 5.70500 0.00333 21 0.94897 2.25244 1.18915 1.59338 29 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00431 6.14125 6.14125 1.46634 0.26236 2.69146 0.07019 22 1.06850 1.91581 2.12679 0.94152 30 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00414 6.18207 6.18207 1.46634 0.26236 5.63838 0.00356 23 1.13005 1.82573 1.47907 1.24468 31 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00414 6.18207 6.18207 1.46634 0.26236 5.63838 0.00356 24 0.98985 1.01622 2.49001 1.69556 32 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00414 6.18207 6.18207 1.46634 0.26236 5.63838 0.00356 25 0.80474 2.64544 1.46303 1.38515 33 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00414 6.18207 6.18207 1.46634 0.26236 5.63838 0.00356 26 0.65917 2.30445 3.18037 1.07488 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00414 6.18207 6.18207 1.46634 0.26236 5.63838 0.00356 27 1.68630 1.58631 1.52146 0.93720 35 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00414 6.18207 6.18207 1.46634 0.26236 5.63838 0.00356 28 1.27202 3.71706 1.92181 0.59950 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00414 6.18207 6.18207 1.46634 0.26236 5.63838 0.00356 29 1.80080 1.31008 2.08200 0.82018 37 u - - _ 1.38629 1.38629 1.38629 1.38629 0.07418 6.18207 2.66741 1.46634 0.26236 5.63838 0.00356 30 0.94026 1.50373 2.13842 1.31180 38 a - - _ 1.38629 1.38629 1.38629 1.38629 0.55995 0.88533 4.12362 0.26563 1.45553 2.79608 0.06299 31 1.45652 1.44407 1.28080 1.37368 41 g - - _ 1.38629 1.38629 1.38629 1.38629 0.00433 6.13822 6.13822 1.46634 0.26236 5.70967 0.00332 32 0.72347 2.10530 2.34990 1.21152 42 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00433 6.13822 6.13822 1.46634 0.26236 5.70967 0.00332 33 2.60466 1.31337 1.94739 0.66453 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00433 6.13822 6.13822 1.46634 0.26236 5.70967 0.00332 34 2.04870 1.58406 1.54977 0.79041 44 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00433 6.13822 6.13822 1.46634 0.26236 5.70967 0.00332 35 1.33051 1.87929 1.62899 0.94976 45 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00433 6.13822 6.13822 1.46634 0.26236 5.70967 0.00332 36 1.57161 0.38928 4.75859 2.24274 46 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02113 6.13822 3.97653 1.46634 0.26236 5.70967 0.00332 37 0.11996 4.97375 5.16917 2.29822 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00440 6.12149 6.12149 1.46634 0.26236 5.73482 0.00324 38 2.56647 6.21647 0.08563 5.72479 48 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00440 6.12149 6.12149 1.46634 0.26236 5.73482 0.00324 39 0.04237 3.43531 5.45850 5.29721 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.32467 6.12149 1.29083 1.46634 0.26236 1.19954 0.35858 40 2.70790 1.94740 0.30687 2.90171 50 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 41 0.50069 2.39862 2.16233 1.67139 51 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 42 1.70014 4.15705 0.51791 1.58025 52 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 43 2.22731 0.72104 2.20707 1.21770 53 c - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 44 1.83156 0.88081 2.51731 1.06504 54 c - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 45 1.33267 2.29875 0.64285 2.20682 55 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 46 1.16472 2.52438 0.69743 2.20709 56 g - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 47 1.62417 1.13470 1.51953 1.33715 57 c - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 48 3.80005 2.14708 0.25772 2.43053 58 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 49 1.71571 1.54800 0.87143 1.66529 59 g - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 50 1.82866 0.88467 3.18340 0.95432 60 c - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 51 1.59968 1.25292 1.79176 1.06218 61 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 52 1.86706 1.64418 0.99211 1.26777 62 g - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 53 1.04073 2.09436 1.06972 1.71175 63 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 54 2.46448 1.36558 1.59005 0.78570 64 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 55 1.47975 2.23893 0.78219 1.56863 65 g - - _ 1.38629 1.38629 1.38629 1.38629 1.96737 0.19660 3.25295 2.37471 0.09766 5.83335 0.00293 56 0.76101 1.95272 1.15592 2.57507 94 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00491 6.01158 6.01158 1.46634 0.26236 3.08178 0.04696 57 0.80043 2.66115 1.14553 1.81438 95 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 58 1.28385 1.60955 1.43989 1.25141 96 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 59 1.18572 1.47366 2.03714 1.09367 97 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 60 1.16769 1.20736 3.11898 1.06210 98 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 61 1.11999 1.28854 1.48771 1.75937 99 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 62 1.85552 1.41079 0.88624 1.67412 100 g - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 63 1.45319 2.29407 1.56081 0.78668 101 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 64 1.18884 1.65951 1.47146 1.28879 102 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 65 1.03051 1.44656 1.65584 1.52847 103 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 66 1.11694 1.37962 2.05459 1.22792 104 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 67 1.19701 1.25890 1.78594 1.40121 105 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 68 1.05159 2.76879 0.90197 1.70314 106 g - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 69 0.76737 2.40506 1.30393 1.74843 107 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 70 0.58747 2.72632 1.44016 1.95250 108 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 71 1.40310 1.49440 1.14068 1.55978 109 g - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 5.83335 0.00293 72 1.31662 1.66317 1.29063 1.31929 110 g - - _ 1.38629 1.38629 1.38629 1.38629 0.00473 6.04855 6.04855 1.46634 0.26236 1.69073 0.20381 73 2.02042 1.46639 1.64870 0.81116 111 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00413 6.18511 6.18511 1.46634 0.26236 5.63312 0.00358 74 0.75037 2.78913 1.39129 1.52519 112 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00413 6.18511 6.18511 1.46634 0.26236 5.63312 0.00358 75 1.23420 1.24910 1.55407 1.55693 113 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00413 6.18511 6.18511 1.46634 0.26236 1.21251 0.35304 76 1.80575 1.84438 1.04636 1.11990 114 g - - _ 1.38629 1.38629 1.38629 1.38629 0.00353 6.34144 6.34144 1.46634 0.26236 3.32628 0.03659 77 2.17602 1.34977 1.35749 0.99451 115 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00349 6.35212 6.35212 1.46634 0.26236 1.88289 0.16505 78 2.02472 3.60787 0.47529 1.51798 116 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00333 6.39994 6.39994 1.46634 0.26236 2.91809 0.05555 79 0.66899 4.76486 1.05198 2.04018 117 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00329 6.41285 6.41285 1.46634 0.26236 5.04581 0.00646 80 0.25101 5.94627 1.52973 5.88607 118 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00329 6.41285 6.41285 1.46634 0.26236 5.04581 0.00646 81 0.61390 2.82952 2.03735 1.31174 119 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05064 6.41285 3.04193 1.46634 0.26236 0.70131 0.68505 82 1.49890 2.28148 1.39581 0.85130 120 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01504 6.48856 4.31174 1.46634 0.26236 4.67677 0.00935 83 1.93693 1.27974 1.33157 1.15937 121 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00308 6.47660 6.47660 1.46634 0.26236 4.74702 0.00872 84 2.29844 0.48134 2.17597 1.78302 122 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01253 6.47660 4.51773 1.46634 0.26236 4.74702 0.00872 85 0.57282 2.64310 1.30179 2.37644 123 A - - _ 1.38629 1.38629 1.38629 1.38629 0.17781 2.13442 3.11037 0.77670 0.61604 0.14056 2.03161 86 2.33983 0.62480 1.96356 1.47873 127 C - - > 1.38629 1.38629 1.38629 1.38629 0.03502 6.57980 3.41033 1.46634 0.26236 1.62107 0.22026 87 1.63643 0.88983 3.28848 1.02921 128 c - - > 1.38629 1.38629 1.38629 1.38629 0.00284 6.55879 6.55879 1.46634 0.26236 4.08738 0.01693 88 1.93229 0.81943 3.24260 0.97966 129 c - - > 1.38629 1.38629 1.38629 1.38629 0.00284 6.55879 6.55879 1.46634 0.26236 0.15013 1.97041 89 2.27976 0.93744 2.12428 0.95052 130 c - - > 1.38629 1.38629 1.38629 1.38629 0.01290 6.62764 4.46595 1.46634 0.26236 0.24196 1.53751 90 1.34751 1.85545 0.98003 1.56814 131 g - - > 1.38629 1.38629 1.38629 1.38629 0.04359 3.18618 6.62581 0.06296 2.79654 0.20723 1.67577 91 5.44984 5.34508 0.01741 4.80505 133 G - - > 1.38629 1.38629 1.38629 1.38629 0.00263 6.63595 6.63595 1.46634 0.26236 1.09861 0.40547 92 0.02109 5.23044 5.07388 4.68205 134 A - - > 1.38629 1.38629 1.38629 1.38629 0.00263 6.63595 6.63595 1.46634 0.26236 1.09861 0.40547 93 2.57928 5.98224 0.12945 3.14490 135 G - - > 1.38629 1.38629 1.38629 1.38629 0.41943 2.57650 1.32222 0.03417 3.39354 1.09861 0.40547 94 1.81034 1.44841 2.02126 0.75722 140 u - - > 1.38629 1.38629 1.38629 1.38629 0.63177 6.32775 0.76236 1.46634 0.26236 0.00980 4.63037 95 1.15483 1.20103 1.26230 2.29260 141 a - - > 1.38629 1.38629 1.38629 1.38629 0.00200 6.21615 * 1.46634 0.26236 0.00000 * //