# Rfam regions for family snoZ107_R87 (RF00360) # file built 15:24:51 31-May-2020 using Rfam version 14.2 (released 2020-04-21) # found 258 regions # columns: sequence accession, bits score, region start, region end, sequence description, species, NCBI tax ID HG417167.1 137.10 29571481 29571365 Oryza rufipogon genomic scaffold, chr03 Oryza rufipogon 4529 CM002489.1 136.80 28558838 28558956 Oryza punctata chromosome 2, whole genome shotgun sequence. Oryza punctata 4537 AP014959.1 136.20 31187249 31187131 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. Oryza sativa Japonica Group 39947 CM002505.1 136.20 30851135 30851017 Oryza nivara chromosome 3, whole genome shotgun sequence. Oryza nivara 4536 CM000128.1 136.20 35345919 35346037 Oryza sativa (indica cultivar-group) chromosome 3, whole genome shotgun sequence. Oryza sativa Indica Group 39946 CM002526.1 135.90 33057954 33058070 Oryza meridionalis cultivar OR44 (W2112) chromosome 3, whole genome shotgun sequence. Oryza meridionalis 40149 CM002517.1 135.60 32273167 32273051 Oryza glumipatula chromosome 3, whole genome shotgun sequence. Oryza glumipatula 40148 CM000128.1 135.10 35350119 35350237 Oryza sativa (indica cultivar-group) chromosome 3, whole genome shotgun sequence. Oryza sativa Indica Group 39946 AP014959.1 135.10 31180953 31180835 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. Oryza sativa Japonica Group 39947 CM002644.1 134.70 28626069 28626185 Oryza barthii chromosome 3, whole genome shotgun sequence. Oryza barthii 65489 CM000128.1 134.50 35348019 35348137 Oryza sativa (indica cultivar-group) chromosome 3, whole genome shotgun sequence. Oryza sativa Indica Group 39946 HG417167.1 134.50 29570319 29570201 Oryza rufipogon genomic scaffold, chr03 Oryza rufipogon 4529 AP014959.1 134.50 31185149 31185031 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. Oryza sativa Japonica Group 39947 AP014959.1 134.50 31183051 31182933 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. Oryza sativa Japonica Group 39947 AP014958.1 134.00 26263438 26263556 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. Oryza sativa Japonica Group 39947 CM002516.1 134.00 27331597 27331715 Oryza glumipatula chromosome 2, whole genome shotgun sequence. Oryza glumipatula 40148 CM002504.1 134.00 25503303 25503421 Oryza nivara chromosome 2, whole genome shotgun sequence. Oryza nivara 4536 HG417166.1 134.00 24566623 24566741 Oryza rufipogon genomic scaffold, chr02 Oryza rufipogon 4529 CM000127.1 134.00 28062179 28062297 Oryza sativa (indica cultivar-group) chromosome 2, whole genome shotgun sequence. Oryza sativa Indica Group 39946 CM002525.1 133.50 27604294 27604409 Oryza meridionalis cultivar OR44 (W2112) chromosome 2, whole genome shotgun sequence. Oryza meridionalis 40149 CM002526.1 133.40 33056228 33056346 Oryza meridionalis cultivar OR44 (W2112) chromosome 3, whole genome shotgun sequence. Oryza meridionalis 40149 ADWL01004759.1 132.20 1322 1440 Oryza glaberrima chromosome 2 Oglab02_0294_6, whole genome shotgun sequence. Oryza glaberrima (African rice) 4538 CM002643.2 132.20 23074383 23074501 Oryza barthii chromosome 2, whole genome shotgun sequence. Oryza barthii 65489 CM002481.1 125.60 4671771 4671664 Leersia perrieri chromosome 3, whole genome shotgun sequence. Leersia perrieri 77586 CM001242.1 122.10 19028810 19028914 Oryza brachyantha chromosome 2, whole genome shotgun sequence. Oryza brachyantha 4533 CM002480.1 121.50 6563282 6563385 Leersia perrieri chromosome 2, whole genome shotgun sequence. Leersia perrieri 77586 CM000780.4 119.20 154378606 154378712 Zea mays cultivar B73 chromosome 4, whole genome shotgun sequence. Zea mays 4577 CM003528.1 117.80 33032772 33032880 Setaria italica strain Yugu1 chromosome I, whole genome shotgun sequence. Setaria italica (foxtail millet) 4555 CM000781.4 117.10 195870379 195870485 Zea mays cultivar B73 chromosome 5, whole genome shotgun sequence. Zea mays 4577 KV778765.1 116.40 46381 46272 Dichanthelium oligosanthes cultivar Kellogg 1175 unplaced genomic scaffold Do_version_2_scaffold516, whole genome shotgun sequence. Dichanthelium oligosanthes 888268 CM000763.3 116.40 63809724 63809618 Sorghum bicolor cultivar BTx623 chromosome 4, whole genome shotgun sequence. Sorghum bicolor (sorghum) 4558 CAJW010158707.1 112.20 5000 4896 Hordeum vulgare subsp. vulgare, WGS project CAJW01000000 data, contig: morex_contig_158707 Hordeum vulgare subsp. vulgare (domesticated barley) 112509 KV774890.1 111.10 194936 195042 Dichanthelium oligosanthes cultivar Kellogg 1175 unplaced genomic scaffold Do_version_2_scaffold173, whole genome shotgun sequence. Dichanthelium oligosanthes 888268 FAOM01033948.1 110.70 6732 6835 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_033948_1BL Triticum aestivum (bread wheat) 4565 AOTI010922244.1 110.60 12418 12315 Triticum urartu cultivar G1812 contig922245, whole genome shotgun sequence. Triticum urartu 4572 FAOM01394343.1 110.30 28489 28386 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_394343_5AS Triticum aestivum (bread wheat) 4565 AOTI010952615.1 110.30 6370 6267 Triticum urartu cultivar G1812 contig952616, whole genome shotgun sequence. Triticum urartu 4572 FAOM01459357.1 110.30 3483 3380 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_459357_5DS Triticum aestivum (bread wheat) 4565 FAOM01032757.1 110.30 45084 44981 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_032757_1BL Triticum aestivum (bread wheat) 4565 FAOM01062371.1 110.00 33948 34051 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_062371_1DL Triticum aestivum (bread wheat) 4565 CM003531.1 109.60 37822423 37822316 Setaria italica strain Yugu1 chromosome IV, whole genome shotgun sequence. Setaria italica (foxtail millet) 4555 FAOM01001135.1 109.60 32135 32238 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_001135_1AL Triticum aestivum (bread wheat) 4565 AOTI010917482.1 109.60 8644 8541 Triticum urartu cultivar G1812 contig917483, whole genome shotgun sequence. Triticum urartu 4572 CM000769.3 108.80 57593215 57593323 Sorghum bicolor cultivar BTx623 chromosome 10, whole genome shotgun sequence. Sorghum bicolor (sorghum) 4558 CAJW010138679.1 108.60 3515 3618 Hordeum vulgare subsp. vulgare, WGS project CAJW01000000 data, contig: morex_contig_138679 Hordeum vulgare subsp. vulgare (domesticated barley) 112509 CAJW010476474.1 108.10 1152 1255 Hordeum vulgare subsp. vulgare, WGS project CAJW01000000 data, contig: morex_contig_476474 Hordeum vulgare subsp. vulgare (domesticated barley) 112509 KB870812.1 107.40 11028918 11028801 Capsella rubella cultivar Monte Gargano unplaced genomic scaffold scaffold_8, whole genome shotgun sequence. Capsella rubella 81985 CAJW011575170.1 107.40 3018 2915 Hordeum vulgare subsp. vulgare, WGS project CAJW01000000 data, contig: morex_contig_1575170 Hordeum vulgare subsp. vulgare (domesticated barley) 112509 CM000882.2 107.20 55026668 55026564 Brachypodium distachyon strain Bd21 chromosome 3, whole genome shotgun sequence. Brachypodium distachyon 15368 CAJW010159459.1 107.00 3284 3181 Hordeum vulgare subsp. vulgare, WGS project CAJW01000000 data, contig: morex_contig_159459 Hordeum vulgare subsp. vulgare (domesticated barley) 112509 JNGA01057619.1 107.00 144 33 Arabis alpina cultivar Pajares Aa.chr8_contig_5822, whole genome shotgun sequence. Arabis alpina (gray rockcress) 50452 CM002876.1 107.00 37129466 37129355 Arabis alpina cultivar Pajares chromosome 8, whole genome shotgun sequence. Arabis alpina (gray rockcress) 50452 AZNC01029836.1 106.80 22906 22797 Glycine soja cultivar W05 scaffold2806_2, whole genome shotgun sequence. Glycine soja 3848 CM000836.2 106.80 42477649 42477540 Glycine max cultivar Williams 82 chromosome 3, whole genome shotgun sequence. Glycine max (soybean) 3847 CM001766.1 106.50 36984385 36984493 Cicer arietinum chromosome Ca3, whole genome shotgun sequence. Cicer arietinum (chickpea) 3827 FAOM01062561.1 106.20 47393 47290 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_062561_1DL Triticum aestivum (bread wheat) 4565 AOTI010462542.1 105.80 1945 2047 Triticum urartu cultivar G1812 contig462543, whole genome shotgun sequence. Triticum urartu 4572 FAOM01000318.1 105.80 68507 68609 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_000318_1AL Triticum aestivum (bread wheat) 4565 CP002688.1 105.40 24782802 24782696 Arabidopsis thaliana chromosome 5, complete sequence. Arabidopsis thaliana (thale cress) 3702 CM000880.2 105.20 28568927 28569031 Brachypodium distachyon strain Bd21 chromosome 1, whole genome shotgun sequence. Brachypodium distachyon 15368 CM001223.2 105.20 45029487 45029377 Medicago truncatula strain A17 chromosome 7, whole genome shotgun sequence. Medicago truncatula (barrel medic) 3880 FAOM01424525.1 105.10 36037 36140 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_424525_5BS Triticum aestivum (bread wheat) 4565 AOTI010407533.1 105.10 3808 3911 Triticum urartu cultivar G1812 contig407534, whole genome shotgun sequence. Triticum urartu 4572 CM000852.2 105.00 47128776 47128667 Glycine max cultivar Williams 82 chromosome 19, whole genome shotgun sequence. Glycine max (soybean) 3847 AZNC01024872.1 105.00 5417 5526 Glycine soja cultivar W05 scaffold1357_86, whole genome shotgun sequence. Glycine soja 3848 FAOM01063566.1 104.80 18416 18518 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_063566_1DL Triticum aestivum (bread wheat) 4565 CM001224.2 104.80 33614575 33614461 Medicago truncatula strain A17 chromosome 8, whole genome shotgun sequence. Medicago truncatula (barrel medic) 3880 FAOM01342769.1 104.60 27463 27566 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_342769_4DL Triticum aestivum (bread wheat) 4565 AOTI010815232.1 104.40 3297 3400 Triticum urartu cultivar G1812 contig815233, whole genome shotgun sequence. Triticum urartu 4572 FAOM01393154.1 104.40 44615 44718 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_393154_5AS Triticum aestivum (bread wheat) 4565 FAOM01458393.1 104.00 17237 17340 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_458393_5DS Triticum aestivum (bread wheat) 4565 CM000769.3 104.00 57567315 57567423 Sorghum bicolor cultivar BTx623 chromosome 10, whole genome shotgun sequence. Sorghum bicolor (sorghum) 4558 FAOM01002590.1 103.00 32065 31962 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_002590_1AL Triticum aestivum (bread wheat) 4565 FAOM01472257.1 102.60 27421 27525 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_472257_6AL Triticum aestivum (bread wheat) 4565 FAOM01499707.1 102.50 174291 174188 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_499707_6BL Triticum aestivum (bread wheat) 4565 KI517748.1 102.20 2385993 2386106 Eutrema salsugineum unplaced genomic scaffold scaffold_6, whole genome shotgun sequence. Eutrema salsugineum 72664 AGCT01018269.1 102.20 4824 4715 Cajanus cajan Scaffold126926_3, whole genome shotgun sequence. Cajanus cajan (pigeon pea) 3821 FAOM01423671.1 102.10 21488 21385 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_423671_5BS Triticum aestivum (bread wheat) 4565 CCCW010018821.1 101.90 16622 16509 Brassica napus, WGS project CCCW01000000 data, contig: 25367 Brassica napus (rape) 3708 CM001223.2 101.50 44254352 44254245 Medicago truncatula strain A17 chromosome 7, whole genome shotgun sequence. Medicago truncatula (barrel medic) 3880 FAOM01000318.1 101.20 71280 71382 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_000318_1AL Triticum aestivum (bread wheat) 4565 FAOM01306882.1 100.70 75924 75821 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_306882_4AS Triticum aestivum (bread wheat) 4565 CM002784.1 100.60 15767191 15767080 Brassica oleracea var. oleracea cultivar TO1000 chromosome C1, whole genome shotgun sequence Brassica oleracea var. oleracea 109376 CM007898.1 100.50 115743295 115743399 Helianthus annuus linkage group 9, whole genome shotgun sequence. Helianthus annuus (common sunflower) 4232 FAOM01032844.1 100.20 25114 25217 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_032844_1BL Triticum aestivum (bread wheat) 4565 BDDD01001105.1 100.00 147419 147312 Cephalotus follicularis DNA, scaffold: scaffold1105, isolate: St1. Cephalotus follicularis 3775 CCCW010031280.1 99.80 18652 18541 Brassica napus, WGS project CCCW01000000 data, contig: 12908 Brassica napus (rape) 3708 ADWL01009012.1 99.70 34211 34323 Oryza glaberrima chromosome 4 Oglab04_0273_6, whole genome shotgun sequence. Oryza glaberrima (African rice) 4538 CM002518.1 99.70 24512993 24513105 Oryza glumipatula chromosome 4, whole genome shotgun sequence. Oryza glumipatula 40148 CM003373.1 99.70 37554968 37555077 Vigna angularis cultivar Jingnong 6 chromosome 3, whole genome shotgun sequence. Vigna angularis (adzuki bean) 3914 JZJH01046569.1 99.70 10849 10958 Vigna angularis cultivar Jingnong 6 scaffold291_62, whole genome shotgun sequence. Vigna angularis (adzuki bean) 3914 CM002645.1 99.70 20119258 20119370 Oryza barthii chromosome 4, whole genome shotgun sequence. Oryza barthii 65489 FAOM01195704.1 99.60 42372 42475 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_195704_3AL Triticum aestivum (bread wheat) 4565 AOTI010005822.1 99.60 3568 3671 Triticum urartu cultivar G1812 contig5822, whole genome shotgun sequence. Triticum urartu 4572 CM007380.1 99.50 4194283 4194176 Lupinus angustifolius cultivar Tanjil chromosome LG20, whole genome shotgun sequence. Lupinus angustifolius (narrow-leaved blue lupine) 3871 MLAU01002669.1 99.50 99436 99329 Lupinus angustifolius cultivar Tanjil contig_2669, whole genome shotgun sequence. Lupinus angustifolius (narrow-leaved blue lupine) 3871 CCCW010021926.1 99.00 3687 3573 Brassica napus, WGS project CCCW01000000 data, contig: 22262 Brassica napus (rape) 3708 CM003506.1 98.90 8103901 8103792 Vigna radiata var. radiata cultivar VC1973A chromosome 3, whole genome shotgun sequence Vigna radiata var. radiata (mung bean) 3916 CM007903.1 98.90 170200817 170200923 Helianthus annuus linkage group 14, whole genome shotgun sequence. Helianthus annuus (common sunflower) 4232 CM002491.1 98.90 25237282 25237393 Oryza punctata chromosome 4, whole genome shotgun sequence. Oryza punctata 4537 CM007903.1 98.90 170266888 170266994 Helianthus annuus linkage group 14, whole genome shotgun sequence. Helianthus annuus (common sunflower) 4232 GL348720.1 98.60 20129344 20129238 Arabidopsis lyrata subsp. lyrata unplaced genomic scaffold ARALYscaffold_8, whole genome shotgun sequence. Arabidopsis lyrata subsp. lyrata 81972 CM001634.1 98.50 11025010 11024899 Brassica rapa chromosome A1, whole genome shotgun sequence. Brassica rapa subsp. pekinensis 51351 FAOM01526721.1 98.30 72598 72702 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_526721_6DL Triticum aestivum (bread wheat) 4565 CM002288.1 98.10 47825047 47824938 Phaseolus vulgaris cultivar G19833 chromosome 1, whole genome shotgun sequence. Phaseolus vulgaris 3885 AOTI010462542.1 98.00 4802 4905 Triticum urartu cultivar G1812 contig462543, whole genome shotgun sequence. Triticum urartu 4572 FAOM01000318.1 97.90 74140 74243 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_000318_1AL Triticum aestivum (bread wheat) 4565 FAOM01063157.1 97.90 4533 4429 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_063157_1DL Triticum aestivum (bread wheat) 4565 CM000882.2 97.70 51624903 51625005 Brachypodium distachyon strain Bd21 chromosome 3, whole genome shotgun sequence. Brachypodium distachyon 15368 AP014960.1 97.70 27238862 27238974 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. Oryza sativa Japonica Group 39947 CM002506.1 97.70 19868808 19868920 Oryza nivara chromosome 4, whole genome shotgun sequence. Oryza nivara 4536 CM000129.1 97.70 25967743 25967855 Oryza sativa (indica cultivar-group) chromosome 4, whole genome shotgun sequence. Oryza sativa Indica Group 39946 HG417168.1 97.70 22932323 22932435 Oryza rufipogon genomic scaffold, chr04 Oryza rufipogon 4529 FAOM01031206.1 97.00 93430 93328 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_031206_1BL Triticum aestivum (bread wheat) 4565 CM001634.1 96.30 21316551 21316660 Brassica rapa chromosome A1, whole genome shotgun sequence. Brassica rapa subsp. pekinensis 51351 FAOM01032844.1 96.30 22109 22211 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_032844_1BL Triticum aestivum (bread wheat) 4565 CM000128.1 96.20 35351929 35352028 Oryza sativa (indica cultivar-group) chromosome 3, whole genome shotgun sequence. Oryza sativa Indica Group 39946 AP014959.1 96.20 31179142 31179043 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. Oryza sativa Japonica Group 39947 HG417167.1 96.20 29573733 29573634 Oryza rufipogon genomic scaffold, chr03 Oryza rufipogon 4529 CM002294.1 95.90 45049935 45050041 Phaseolus vulgaris cultivar G19833 chromosome 7, whole genome shotgun sequence. Phaseolus vulgaris 3885 CCCW010027452.1 95.80 7416 7518 Brassica napus, WGS project CCCW01000000 data, contig: 16736 Brassica napus (rape) 3708 CCCW010029201.1 95.80 55212 55110 Brassica napus, WGS project CCCW01000000 data, contig: 14987 Brassica napus (rape) 3708 CM002786.1 95.80 8711662 8711560 Brassica oleracea var. oleracea cultivar TO1000 chromosome C3, whole genome shotgun sequence Brassica oleracea var. oleracea 109376 CM000781.4 95.80 49270752 49270860 Zea mays cultivar B73 chromosome 5, whole genome shotgun sequence. Zea mays 4577 CCCW010026589.1 95.70 24972 24863 Brassica napus, WGS project CCCW01000000 data, contig: 17599 Brassica napus (rape) 3708 CCCW010033536.1 95.70 23529 23420 Brassica napus, WGS project CCCW01000000 data, contig: 10652 Brassica napus (rape) 3708 CM001636.1 95.60 6745783 6745681 Brassica rapa chromosome A3, whole genome shotgun sequence. Brassica rapa subsp. pekinensis 51351 KI536726.1 95.40 14963332 14963230 Citrus clementina cultivar Clemenules unplaced genomic scaffold scaffold_4, whole genome shotgun sequence. Citrus clementina 85681 CM002785.1 95.20 14172409 14172300 Brassica oleracea var. oleracea cultivar TO1000 chromosome C2, whole genome shotgun sequence Brassica oleracea var. oleracea 109376 CM007368.1 95.10 6051238 6051345 Lupinus angustifolius cultivar Tanjil chromosome LG08, whole genome shotgun sequence. Lupinus angustifolius (narrow-leaved blue lupine) 3871 MLAU01025199.1 95.10 88906 88799 Lupinus angustifolius cultivar Tanjil contig_25199, whole genome shotgun sequence. Lupinus angustifolius (narrow-leaved blue lupine) 3871 CM003375.1 95.00 30522983 30522874 Vigna angularis cultivar Jingnong 6 chromosome 5, whole genome shotgun sequence. Vigna angularis (adzuki bean) 3914 JZJH01038513.1 95.00 53098 53207 Vigna angularis cultivar Jingnong 6 scaffold14_8, whole genome shotgun sequence. Vigna angularis (adzuki bean) 3914 JJMO01000773.1 95.00 191909 191803 Vigna radiata var. radiata cultivar VC1973A scaffold_372, whole genome shotgun sequence Vigna radiata var. radiata (mung bean) 3916 ATGF01023612.1 94.40 7842 7945 Morus notabilis contig23612, whole genome shotgun sequence. Morus notabilis 981085 KI517384.1 93.50 10716130 10716020 Eutrema salsugineum unplaced genomic scaffold scaffold_1, whole genome shotgun sequence. Eutrema salsugineum 72664 CM007652.1 93.40 27500327 27500431 Prunus persica cultivar Lovell chromosome G2, whole genome shotgun sequence. Prunus persica (peach) 3760 JJOQ01025375.1 93.40 1555 1657 Citrus sinensis cultivar Ridge Pineapple sweet orange scaffold00415_contig_17, whole genome shotgun sequence. Citrus sinensis 2711 CCCW010039596.1 93.30 37328 37437 Brassica napus, WGS project CCCW01000000 data, contig: 4592 Brassica napus (rape) 3708 JZJH01043044.1 93.10 13119 13225 Vigna angularis cultivar Jingnong 6 scaffold208_14, whole genome shotgun sequence. Vigna angularis (adzuki bean) 3914 CM001066.2 93.10 55496094 55495987 Solanum lycopersicum cultivar Heinz 1706 chromosome 3, whole genome shotgun sequence. Solanum lycopersicum 4081 CM002813.1 93.10 59828008 59827902 Capsicum annuum cultivar Zunla-1 chromosome 2, whole genome shotgun sequence Capsicum annuum 4072 FAOM01063545.1 92.80 18591 18693 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_063545_1DL Triticum aestivum (bread wheat) 4565 AWUE01023877.1 92.30 54030 54133 Corchorus olitorius cultivar O-4 contig23910, whole genome shotgun sequence. Corchorus olitorius 93759 KB847030.1 91.90 163273 163375 Nelumbo nucifera unplaced genomic scaffold scaffold00247, whole genome shotgun sequence Nelumbo nucifera 4432 FAOM01542951.1 91.90 22764 22666 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_542951_6DS Triticum aestivum (bread wheat) 4565 AWWV01007778.1 91.80 92298 92195 Corchorus capsularis cultivar CVL-1 contig07799, whole genome shotgun sequence. Corchorus capsularis 210143 CM001881.1 91.40 24619123 24619226 Theobroma cacao cultivar Matina 1-6 chromosome 3, whole genome shotgun sequence. Theobroma cacao (cacao) 3641 FAOM01001101.1 91.40 43525 43422 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_001101_1AL Triticum aestivum (bread wheat) 4565 LSRQ01005265.1 91.30 49164 49064 Ananas comosus cultivar MD2 ACMD2_Scaffold_5265, whole genome shotgun sequence. Ananas comosus (pineapple) 4615 CM009301.1 91.00 13482861 13482967 Populus trichocarpa isolate Nisqually-1 chromosome 12, whole genome shotgun sequence. Populus trichocarpa 3694 AARH02004460.1 91.00 387775 387881 Populus trichocarpa scaffold_12_contig_179, whole genome shotgun sequence. Populus trichocarpa 3694 AEWC01028536.1 90.70 1952 2058 Solanum tuberosum cultivar DM 1-3 516 R44 scf00268_55, whole genome shotgun sequence. Solanum tuberosum (potato) 4113 FAOM01528969.1 90.70 11054 11157 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_528969_6DL Triticum aestivum (bread wheat) 4565 AOTI010651473.1 90.60 10490 10387 Triticum urartu cultivar G1812 contig651474, whole genome shotgun sequence. Triticum urartu 4572 CM002790.1 90.30 40154952 40155055 Brassica oleracea var. oleracea cultivar TO1000 chromosome C7, whole genome shotgun sequence Brassica oleracea var. oleracea 109376 CCCW010035123.1 90.30 46977 46874 Brassica napus, WGS project CCCW01000000 data, contig: 9065 Brassica napus (rape) 3708 APLE01002263.1 90.30 31846 31740 Erythranthe guttata cultivar DUN x IM62 scaffold_21_contig_3, whole genome shotgun sequence. Mimulus guttatus (spotted monkey flower) 4155 AFEW01045852.1 90.30 3829 3724 Jatropha curcas cultivar GZQX0401 scaffold906_44, whole genome shotgun sequence. Jatropha curcas 180498 MVGT01001076.1 90.10 345147 345252 Macleaya cordata isolate BLH2017 scaffold1789, whole genome shotgun sequence. Macleaya cordata 56857 CM009304.1 89.70 12742102 12742214 Populus trichocarpa isolate Nisqually-1 chromosome 15, whole genome shotgun sequence. Populus trichocarpa 3694 AARH02005236.1 89.70 49081 49193 Populus trichocarpa scaffold_15_contig_159, whole genome shotgun sequence. Populus trichocarpa 3694 AARH02011241.1 89.70 3247 3359 Populus trichocarpa scaffold_1248_contig_1, whole genome shotgun sequence. Populus trichocarpa 3694 CM002784.1 89.40 34074798 34074907 Brassica oleracea var. oleracea cultivar TO1000 chromosome C1, whole genome shotgun sequence Brassica oleracea var. oleracea 109376 AYZV02073771.1 89.40 9859 9972 Spinacia oleracea cultivar SynViroflay scaffold17721.con0007.1, whole genome shotgun sequence. Spinacia oleracea (spinach) 3562 AOTI010245450.1 89.10 7515 7618 Triticum urartu cultivar G1812 contig245450, whole genome shotgun sequence. Triticum urartu 4572 KI517464.1 89.00 14058136 14058028 Eutrema salsugineum unplaced genomic scaffold scaffold_2, whole genome shotgun sequence. Eutrema salsugineum 72664 MVGT01001713.1 88.90 399069 398964 Macleaya cordata isolate BLH2017 scaffold1587, whole genome shotgun sequence. Macleaya cordata 56857 HE813985.1 88.40 21439569 21439672 Musa acuminata subsp. malaccensis Doubled-haploid Pahang (DH-Pahang) genomic chromosome, chr11 Musa acuminata subsp. malaccensis 214687 CAJI01003874.1 88.40 9008 9130 Cucumis melo, WGS project CAJI01000000 data, contig: 03874 Cucumis melo (muskmelon) 3656 CCCW010015098.1 88.10 3492 3383 Brassica napus, WGS project CCCW01000000 data, contig: 29090 Brassica napus (rape) 3708 FAOM01641109.1 87.80 81957 81854 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_641109_U_4AL-0.228746_2AS-0.145344 Triticum aestivum (bread wheat) 4565 CM003270.1 87.70 6758062 6757961 Gossypium hirsutum cultivar TM-1 chromosome 21, whole genome shotgun sequence Gossypium hirsutum (upland cotton) 3635 CM001746.1 87.70 3194874 3194975 Gossypium raimondii chromosome 7, whole genome shotgun sequence. Gossypium raimondii 29730 ALYE01008178.1 87.70 140893 140994 Gossypium raimondii Chr07_contig_43, whole genome shotgun sequence. Gossypium raimondii 29730 CM003275.1 87.70 14404352 14404453 Gossypium hirsutum cultivar TM-1 chromosome 26, whole genome shotgun sequence Gossypium hirsutum (upland cotton) 3635 JRRC01367290.1 87.70 1734 1835 Gossypium arboreum cultivar AKA8401 contig_37074_1, whole genome shotgun sequence. Gossypium arboreum 29729 AYMY01S000015.1 87.60 17096 16991 Nicotiana tabacum cultivar TN90 Ntab-TN90_scaffold15, whole genome shotgun sequence Nicotiana tabacum (common tobacco) 4097 ASAF01103850.1 87.60 9754 9859 Nicotiana sylvestris Nsyl_contig103850, whole genome shotgun sequence. Nicotiana sylvestris (wood tobacco) 4096 FN597040.1 87.60 5410265 5410161 Vitis vinifera, whole genome shotgun sequence of line PN40024, unoriented chromosome 16, chr16 Vitis vinifera 29760 CM002926.1 87.50 6510445 6510323 Cucumis sativus cultivar 9930 chromosome 5, whole genome shotgun sequence. Cucumis sativus (cucumber) 3659 BDFN01000900.1 87.40 1283226 1283332 Ipomoea nil DNA, scaffold: scaffold0900, cultivar: Tokyo-kokei standard. Ipomoea nil (Japanese morning glory) 35883 AOTI011210286.1 87.20 4825 4722 Triticum urartu cultivar G1812 contig1210287, whole genome shotgun sequence. Triticum urartu 4572 CM002505.1 87.10 30849359 30849261 Oryza nivara chromosome 3, whole genome shotgun sequence. Oryza nivara 4536 CM003250.1 86.60 91920115 91920011 Gossypium hirsutum cultivar TM-1 chromosome 1, whole genome shotgun sequence Gossypium hirsutum (upland cotton) 3635 CM001767.1 86.60 6992429 6992539 Cicer arietinum chromosome Ca4, whole genome shotgun sequence. Cicer arietinum (chickpea) 3827 JRRC01212214.1 86.60 6263 6367 Gossypium arboreum cultivar AKA8401 contig_2501_11, whole genome shotgun sequence. Gossypium arboreum 29729 CM001767.1 86.60 6998393 6998503 Cicer arietinum chromosome Ca4, whole genome shotgun sequence. Cicer arietinum (chickpea) 3827 CM007650.1 86.40 164632833 164632727 Zea mays cultivar B73 chromosome 7, whole genome shotgun sequence. Zea mays 4577 CM004282.1 86.10 26301653 26301760 Daucus carota subsp. sativus cultivar DH1 chromosome 5, whole genome shotgun sequence. Daucus carota subsp. sativus 79200 CM001635.1 86.10 9167939 9167830 Brassica rapa chromosome A2, whole genome shotgun sequence. Brassica rapa subsp. pekinensis 51351 KB846805.1 86.00 61408 61512 Nelumbo nucifera unplaced genomic scaffold scaffold00022, whole genome shotgun sequence Nelumbo nucifera 4432 AYZV02150395.1 86.00 1152 1040 Spinacia oleracea cultivar SynViroflay scaffold41581.con0004.1, whole genome shotgun sequence. Spinacia oleracea (spinach) 3562 AYZV02065226.1 86.00 3467 3579 Spinacia oleracea cultivar SynViroflay scaffold15378.1, whole genome shotgun sequence. Spinacia oleracea (spinach) 3562 AEWC01028536.1 86.00 1374 1480 Solanum tuberosum cultivar DM 1-3 516 R44 scf00268_55, whole genome shotgun sequence. Solanum tuberosum (potato) 4113 CM001637.1 86.00 12505100 12504991 Brassica rapa chromosome A4, whole genome shotgun sequence. Brassica rapa subsp. pekinensis 51351 CM004282.1 85.30 23843247 23843353 Daucus carota subsp. sativus cultivar DH1 chromosome 5, whole genome shotgun sequence. Daucus carota subsp. sativus 79200 CM004282.1 85.30 23835346 23835452 Daucus carota subsp. sativus cultivar DH1 chromosome 5, whole genome shotgun sequence. Daucus carota subsp. sativus 79200 KB870812.1 84.90 6749018 6749127 Capsella rubella cultivar Monte Gargano unplaced genomic scaffold scaffold_8, whole genome shotgun sequence. Capsella rubella 81985 KK198753.1 84.80 39745713 39745608 Eucalyptus grandis cultivar BRASUZ1 unplaced genomic scaffold scaffold_1, whole genome shotgun sequence. Eucalyptus grandis 71139 CM002792.1 84.40 32723842 32723951 Brassica oleracea var. oleracea cultivar TO1000 chromosome C9, whole genome shotgun sequence Brassica oleracea var. oleracea 109376 CCCW010043411.1 84.40 7730 7839 Brassica napus, WGS project CCCW01000000 data, contig: 777 Brassica napus (rape) 3708 FAOM01001101.1 84.30 35880 35779 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_001101_1AL Triticum aestivum (bread wheat) 4565 AOTI010651473.1 84.30 2848 2747 Triticum urartu cultivar G1812 contig651474, whole genome shotgun sequence. Triticum urartu 4572 FAOM01062896.1 84.30 10503 10606 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_062896_1DL Triticum aestivum (bread wheat) 4565 CM002325.2 84.10 42315394 42315502 Beta vulgaris subsp. vulgaris chromosome 5, whole genome shotgun sequence. Beta vulgaris subsp. vulgaris 3555 AYZS02013477.1 84.10 1539 1647 Beta vulgaris subsp. vulgaris Bvchr5.sca022.con0085.1, whole genome shotgun sequence. Beta vulgaris subsp. vulgaris 3555 FAOM01001101.1 83.90 55013 54910 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_001101_1AL Triticum aestivum (bread wheat) 4565 CM001066.2 83.50 55496698 55496592 Solanum lycopersicum cultivar Heinz 1706 chromosome 3, whole genome shotgun sequence. Solanum lycopersicum 4081 AWHE01030561.1 83.50 1352 1465 Amborella trichopoda AMTR_V1.0_contig_30561, whole genome shotgun sequence. Amborella trichopoda 13333 GL348720.1 82.90 14372460 14372569 Arabidopsis lyrata subsp. lyrata unplaced genomic scaffold ARALYscaffold_8, whole genome shotgun sequence. Arabidopsis lyrata subsp. lyrata 81972 JNGA01055383.1 82.90 8750 8858 Arabis alpina cultivar Pajares Aa.chr8_contig_3586, whole genome shotgun sequence. Arabis alpina (gray rockcress) 50452 CM002876.1 82.90 23620229 23620337 Arabis alpina cultivar Pajares chromosome 8, whole genome shotgun sequence. Arabis alpina (gray rockcress) 50452 AASG02005463.1 82.70 7763 7658 Ricinus communis ctg_1100012361039, whole genome shotgun sequence. Ricinus communis (castor bean) 3988 CM002813.1 82.60 59801069 59800966 Capsicum annuum cultivar Zunla-1 chromosome 2, whole genome shotgun sequence Capsicum annuum 4072 CAJW011854473.1 82.40 130 232 Hordeum vulgare subsp. vulgare, WGS project CAJW01000000 data, contig: morex_contig_1854473 Hordeum vulgare subsp. vulgare (domesticated barley) 112509 ALYE01003652.1 82.30 1909 2013 Gossypium raimondii Chr03_contig_754, whole genome shotgun sequence. Gossypium raimondii 29730 CM001742.1 82.30 34083200 34083304 Gossypium raimondii chromosome 3, whole genome shotgun sequence. Gossypium raimondii 29730 CP002688.1 80.60 20795719 20795831 Arabidopsis thaliana chromosome 5, complete sequence. Arabidopsis thaliana (thale cress) 3702 HE813979.1 80.30 23521890 23521993 Musa acuminata subsp. malaccensis Doubled-haploid Pahang (DH-Pahang) genomic chromosome, chr5 Musa acuminata subsp. malaccensis 214687 CM007648.1 79.60 211879787 211879682 Zea mays cultivar B73 chromosome 2, whole genome shotgun sequence. Zea mays 4577 CM003256.1 79.20 11408632 11408528 Gossypium hirsutum cultivar TM-1 chromosome 7, whole genome shotgun sequence Gossypium hirsutum (upland cotton) 3635 MTKT01002440.1 78.00 244423 244535 Punica granatum cultivar Dabenzi scaffold59, whole genome shotgun sequence. Punica granatum 22663 APLE01001217.1 77.80 13126 13219 Erythranthe guttata cultivar DUN x IM62 scaffold_9_contig_29, whole genome shotgun sequence. Mimulus guttatus (spotted monkey flower) 4155 AARH02004460.1 75.80 389044 389141 Populus trichocarpa scaffold_12_contig_179, whole genome shotgun sequence. Populus trichocarpa 3694 CM009301.1 75.80 13600457 13600554 Populus trichocarpa isolate Nisqually-1 chromosome 12, whole genome shotgun sequence. Populus trichocarpa 3694 CM009301.1 75.80 13484130 13484227 Populus trichocarpa isolate Nisqually-1 chromosome 12, whole genome shotgun sequence. Populus trichocarpa 3694 FAOM01499694.1 75.60 133277 133380 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_499694_6BL Triticum aestivum (bread wheat) 4565 CM007903.1 74.50 170201192 170201290 Helianthus annuus linkage group 14, whole genome shotgun sequence. Helianthus annuus (common sunflower) 4232 FAOM01031910.1 73.60 27529 27632 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_031910_1BL Triticum aestivum (bread wheat) 4565 FN597040.1 73.20 5419185 5419081 Vitis vinifera, whole genome shotgun sequence of line PN40024, unoriented chromosome 16, chr16 Vitis vinifera 29760 FAOM01063545.1 72.40 23145 23248 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_063545_1DL Triticum aestivum (bread wheat) 4565 CM007903.1 69.80 170267239 170267337 Helianthus annuus linkage group 14, whole genome shotgun sequence. Helianthus annuus (common sunflower) 4232 LFYR01000888.1 69.80 58796 58689 Zostera marina strain Finnish scaffold_259, whole genome shotgun sequence. Zostera marina 29655 KB846928.1 68.40 546313 546210 Nelumbo nucifera unplaced genomic scaffold scaffold00145, whole genome shotgun sequence Nelumbo nucifera 4432 BDFN01000900.1 67.90 1030834 1030944 Ipomoea nil DNA, scaffold: scaffold0900, cultivar: Tokyo-kokei standard. Ipomoea nil (Japanese morning glory) 35883 CAJW010019976.1 66.10 124 23 Hordeum vulgare subsp. vulgare, WGS project CAJW01000000 data, contig: morex_contig_19976 Hordeum vulgare subsp. vulgare (domesticated barley) 112509 ALWZ042045325.1 65.20 1963 1869 Picea glauca, whole genome shotgun sequence. Picea glauca (white spruce) 3330 ALWZ046062177.1 65.20 32432 32526 Picea glauca, whole genome shotgun sequence. Picea glauca (white spruce) 3330 CM000762.3 63.70 17386865 17386974 Sorghum bicolor cultivar BTx623 chromosome 3, whole genome shotgun sequence. Sorghum bicolor (sorghum) 4558 ALWZ041448703.1 62.50 442 536 Picea glauca, whole genome shotgun sequence. Picea glauca (white spruce) 3330 AYZV02025349.1 62.40 28013 28102 Spinacia oleracea cultivar SynViroflay scaffold5552.con0023.1, whole genome shotgun sequence. Spinacia oleracea (spinach) 3562 BDFN01000900.1 61.40 1282484 1282592 Ipomoea nil DNA, scaffold: scaffold0900, cultivar: Tokyo-kokei standard. Ipomoea nil (Japanese morning glory) 35883 AASG02005463.1 60.80 6413 6315 Ricinus communis ctg_1100012361039, whole genome shotgun sequence. Ricinus communis (castor bean) 3988 CAJW010275921.1 58.80 2793 2707 Hordeum vulgare subsp. vulgare, WGS project CAJW01000000 data, contig: morex_contig_275921 Hordeum vulgare subsp. vulgare (domesticated barley) 112509 CM002321.2 58.60 11914612 11914523 Beta vulgaris subsp. vulgaris chromosome 1, whole genome shotgun sequence. Beta vulgaris subsp. vulgaris 3555 AYZS02000620.1 58.60 3836 3747 Beta vulgaris subsp. vulgaris Bvchr1.sca002.con0236.1, whole genome shotgun sequence. Beta vulgaris subsp. vulgaris 3555 CM002791.1 57.70 15160890 15160978 Brassica oleracea var. oleracea cultivar TO1000 chromosome C8, whole genome shotgun sequence Brassica oleracea var. oleracea 109376 AGCT01010033.1 56.80 36632 36727 Cajanus cajan CcLG11_1646, whole genome shotgun sequence. Cajanus cajan (pigeon pea) 3821 CM003613.1 56.80 25465100 25465195 Cajanus cajan chromosome 11, whole genome shotgun sequence. Cajanus cajan (pigeon pea) 3821 FAOM01514263.1 56.60 22543 22487 Triticum aestivum genome assembly, contig: Triticum_aestivum_CS42_TGACv1_scaffold_514263_6BS Triticum aestivum (bread wheat) 4565 BDFN01000900.1 56.00 1203124 1203232 Ipomoea nil DNA, scaffold: scaffold0900, cultivar: Tokyo-kokei standard. Ipomoea nil (Japanese morning glory) 35883 BDFN01000900.1 56.00 1076866 1076974 Ipomoea nil DNA, scaffold: scaffold0900, cultivar: Tokyo-kokei standard. Ipomoea nil (Japanese morning glory) 35883 DS545001.1 54.70 244712 244604 Physcomitrella patens subsp. patens PHYPAscaffold_112 genomic scaffold, whole genome shotgun sequence. Physcomitrella patens 3218 CM000764.3 53.80 9591753 9591648 Sorghum bicolor cultivar BTx623 chromosome 5, whole genome shotgun sequence. Sorghum bicolor (sorghum) 4558 AUSU01003246.1 53.20 10037 10128 Genlisea aurea contig_4731, whole genome shotgun sequence. Genlisea aurea 192259 AFEW01045852.1 50.20 2630 2528 Jatropha curcas cultivar GZQX0401 scaffold906_44, whole genome shotgun sequence. Jatropha curcas 180498 CM002813.1 50.10 59826946 59826838 Capsicum annuum cultivar Zunla-1 chromosome 2, whole genome shotgun sequence Capsicum annuum 4072