Rfam: Seed sequence alignment for RF03142

URS0001A23826_12908/1-65 unclassified sequences 0.0 URS0001A23944_12908/1-65 unclassified sequences 0.0 URS0001A23AA7_12908/1-64 unclassified sequences 0.0 URS0001A234AE_12908/1-64 unclassified sequences 0.0 URS0001A235C6_12908/1-65 unclassified sequences 0.0 URS0001A2444E_12908/1-65 unclassified sequences 0.0 URS0001A23464_12908/1-65 unclassified sequences 0.0 URS0001A23A06_12908/1-65 unclassified sequences 0.0 URS0001A24614_12908/1-65 unclassified sequences 0.0 URS0001A243F9_12908/1-65 unclassified sequences 0.0 URS0001A24669_12908/1-65 unclassified sequences 0.0 URS0001A2489A_12908/1-65 unclassified sequences 0.0 URS0001A23BEB_12908/1-65 unclassified sequences 0.0 URS0001A249CE_12908/1-65 unclassified sequences 0.0 URS0001A23E07_12908/1-65 unclassified sequences 0.0 URS0001A23305_12908/1-65 unclassified sequences 0.0 URS0001A23442_12908/1-65 unclassified sequences 0.0 URS0001A247E1_12908/1-65 unclassified sequences 0.0 URS0001A2345D_12908/1-65 unclassified sequences 0.0 URS0001A23342_12908/1-65 unclassified sequences 0.0 URS0001A244E9_12908/1-65 unclassified sequences 0.0 URS0001A231F8_12908/1-65 unclassified sequences 0.0 URS0001A23F99_12908/1-65 unclassified sequences 0.0 URS0001A23E4D_12908/1-65 unclassified sequences 0.0 URS0001A23E25_12908/1-65 unclassified sequences 0.0 URS0001A24535_12908/1-65 unclassified sequences 0.0 URS0001A24749_12908/1-65 unclassified sequences 0.0 URS0001A241DA_12908/1-65 unclassified sequences 0.0 URS0001A23F8A_12908/1-65 unclassified sequences 0.0 URS0001A239EE_12908/1-65 unclassified sequences 0.0

GGCC.ACCU..CCG................................GGG....GGC.UUUACCAAA......GGUGGuuaaa......--..........................----...........................................................................--.......................C.CACCG.gCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAAA......GGCGG...........UU..........................A---...........................................................................GA.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAAA......GGCAGuaaua......--..........................----...........................................................................--.......................-.CGCCA.aCa.U.AGC.AGACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAAA......GGCGUuaaa.......--..........................----...........................................................................--.......................A.UGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCGAA......GGCGAuaaaa......--..........................----...........................................................................--.......................C.CGCCG.aCa.C.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCGAA......GGCGAuaaau......--..........................----...........................................................................--.......................U.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCGAA......GGCGAuaaaa......--..........................----...........................................................................--.......................U.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..CCG................................GGG....GGC.UUUACCACA......GGCGCuaaca......--..........................----...........................................................................--.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..GUG................................GGG....GGC.UUUACCAUA......GGCGGugaau......--..........................----...........................................................................--.......................C.CGCCG.aCa.C.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCGAA......GGCGGuauua......--..........................----...........................................................................--.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..GCG................................GGG....GGC.UUUACCAUA......GGCAUugaaa......--..........................----...........................................................................--.......................C.UGCCG.aUa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..CUG................................GGG....GGC.UUUACCAAA......GGCGGuaaau......--..........................----...........................................................................--.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..CAG................................GGG....GGC.UUUACCAAA......GGCGGuaaau......--..........................----...........................................................................--.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..AAG................................GGG....GGC.UUUACCAAA......GGCGGuaaau......--..........................----...........................................................................--.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..GCG................................GGG....GGC.UUUACCAUA......GGCGGuaaga......--..........................----...........................................................................--.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAUA......GGCGGcuaau......--..........................----...........................................................................--.......................C.CGUCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAAA......GGCGGcaaau......--..........................----...........................................................................--.......................C.CGUCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCU.ACCU..UCG................................GGG....GGC.UUUACCAAA......GGCGGcaaau......--..........................----...........................................................................--.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..GCG................................GGG....GGC.UUUACCAUA......GGCAGuaaaa......--..........................----...........................................................................--.......................C.UGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAAA......AGCGGuaaaa......--..........................----...........................................................................--.......................C.CGCUG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAUA......GGCGGuaaaa......--..........................----...........................................................................--.......................C.UGCCG.aCg.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAUA......GGCGGuaaaa......--..........................----...........................................................................--.......................C.UGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACUU..UCG................................GGG....GGC.UUUACCAAA......GGCGGuuagu......--..........................----...........................................................................--.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCC..UCG................................GGG....GGC.UUUACCAAA......GGCGGuuagu......--..........................----...........................................................................--.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAAA......GGCGGuuagu......--..........................----...........................................................................--.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..GCG................................GGG....GGC.UUUACCAAA......GGCGGuaagu......--..........................----...........................................................................--.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAAA......GGCGGuaagu......--..........................----...........................................................................--.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAAA......GGCGGuaaau......--..........................----...........................................................................--.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAUA......GGCGGuaaaa......--..........................----...........................................................................--.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAAA......GGCGGuaaaa......--..........................----...........................................................................--.......................C.CGCCG.aCa.U.AGC.AAACGGA.AGACAGA.AA