Rfam: Seed sequence alignment for RF03142

URS0001A232AD_388401/1-73 Rhodobacteraceae bacterium HTCC2150 0.0 URS0001A23CDF_12908/1-65 unclassified sequences 0.0 URS0001A23CBF_1402135/1-66 Sulfitobacter pseudonitzschiae 0.0 URS0001A23CBF_1380367/1-66 Sulfitobacter sp. 20_GPM-1509m 0.0 URS0001A23353_12908/1-79 unclassified sequences 0.0 URS0001A24394_1305735/1-64 Oceanicola sp. HL-35 0.0 URS0001A23AFB_388399/1-64 Sagittula stellata E-37 0.0 URS0001A24263_12908/1-62 unclassified sequences 0.0 URS0001A24AAD_12908/1-65 unclassified sequences 0.0 URS0001A233A7_391613/1-64 Roseovarius sp. TM1035 0.0 URS0001A249A5_12908/1-66 unclassified sequences 0.0 URS0001A245EE_12908/1-66 unclassified sequences 0.0 URS0001A239B0_12908/1-64 unclassified sequences 0.0 URS0001A23A47_12908/1-64 unclassified sequences 0.0 URS0001A236C0_314264/1-64 Roseovarius sp. 217 0.0 URS0001A24B23_12908/1-64 unclassified sequences 0.0 URS0001A24B23_1288298/1-64 Roseovarius mucosus DSM 17069 0.0 URS0001A2362F_12908/1-76 unclassified sequences 0.0 URS0001A249DD_12908/1-67 unclassified sequences 0.0 URS0001A241E7_12908/1-67 unclassified sequences 0.0 URS0001A24419_12908/1-67 unclassified sequences 0.0 URS0001A244E3_12908/1-69 unclassified sequences 0.0 URS0001A23217_12908/1-69 unclassified sequences 0.0 URS0001A239B6_12908/1-69 unclassified sequences 0.0 URS0001A23F3B_12908/1-69 unclassified sequences 0.0 URS0001A249EF_12908/1-69 unclassified sequences 0.0 URS0001A23AB8_12908/1-69 unclassified sequences 0.0 URS0001A23934_12908/1-69 unclassified sequences 0.0 URS0001A2320D_12908/1-69 unclassified sequences 0.0 URS0001A246D4_12908/1-69 unclassified sequences 0.0

GCGG.ACCU..ACG................................GGG....CCG.CGCACACUU......UCAGAc..........CUugaa......................AUA-.......................................................................uucaAG.......................G.CUGAG..Ca.-.UG-.AAACGGA.AGACAGA.AA GGCC.ACCU..CCG................................GGG....GGC.UUUACCAAA......GGCGGuuaaa......--..........................----...........................................................................--.......................C.UGCCG..-.aCaUAGcAAACGGA.AGACAGA.AA GGGG.ACCU..UCG................................GGG....CCC.UACAACCAC......GGCGA...........C-..........................UUCG...........................................................................-G.......................U.CGCUG.aC..A.AGCaAAACGGA.AGACAGC.AA GGGG.ACCU..UCG................................GGG....CCC.UACAACCAC......GGCGA...........C-..........................UUCG...........................................................................-G.......................U.CGCUG.aC..A.AGCaAAACGGA.AGACAGC.AA GGCC.ACCUuuCAA..............................aaGGG....GGC.UUGAACAUA......GGCGGagau.......GCcc........................GAA-.........................................................................ggGCcu.....................U.CGCCG..U..U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..ACG................................GGG....GGC.UAUCACAUA......GGCAG...........G-..........................AAUA...........................................................................-C.......................C.UGCCG..Uu.-.UGC.UAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UAUUACAUA......AGCCG...........G-..........................GCAA...........................................................................-C.......................C.GGCUG..C..U.AGC.UAACGGA.AGACAGA.AA GGCC.ACCU..CUGg...............................GGG....GGC.UUUACCAAAc.....GGUGAau.........--..........................----...........................................................................--.......................C.CGCCC.aUa.U.AGC.AAACGG-.AGACAGA.-A GGCC.ACCU..UUG................................GGG....GGC.UACAACAUA......GGCGGgcaugau....--..........................----...........................................................................--.......................C.CGCUG..C..A.AGC.AAACGGA.AGACAGA.AA GGCC.ACCC..UCG................................GGG....GGC.UAUAACAUA......GGCGG...........GU..........................UU--...........................................................................AC.......................C.UGCCG..U..A.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..ACG................................GGG....GGC.UAUAACAGAca....GGCGG...........G-..........................GUAA...........................................................................-C.......................C.CGCCG..C..AaAGC.-AACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UACAACAGAca....GGCGG...........G-..........................GCAA...........................................................................-C.......................C.CGCCG..C..AaAGC.-AACGGA.AGACAGA.AA GGCC.ACCC..UCG................................GGG....GGC.UACAACACA......GGCAG...........G-..........................UUAU...........................................................................-C.......................C.UGCCG..-..UaAGC.AAACGGA.AGACAGA.AA GGCC.ACCC..UAG................................GGG....GGC.UACAACACA......GGCAG...........G-..........................UUAU...........................................................................-C.......................C.UGCCG..-..UaAGC.AAACGGA.AGACAGA.AA GGCC.ACCC..UCG................................GGG....GGC.UAUAACAUA......GGCGG...........G-..........................GUAU...........................................................................-C.......................C.CGCCG..-..UaAGC.AAACGGA.AGACAGA.AA GGCC.ACCC..UCG................................GGG....GGC.UAUAACAUA......GGCGG...........G-..........................GCAU...........................................................................-C.......................C.CGCCG..-..UaAGC.AAACGGA.AGACAGA.AA GGCC.ACCC..UCG................................GGG....GGC.UAUAACAUA......GGCGG...........G-..........................GCAU...........................................................................-C.......................C.CGCCG..-..UaAGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUACACAUA......GGCGGgccccu.....GGc.........................AACCag........................................................................gCC.......................C.CGCCG..C..U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UAUUACAUA......GGCGG...........GGc.........................AGG-..........................................................................gCC.......................C.UGCCG..U..U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UAUUACAUA......GGCGG...........GGc.........................AGG-..........................................................................gCC.......................C.UGCCG..C..U.AGC.AGACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UAUCACAUA......GGCAG...........GGc.........................AGG-..........................................................................gCC.......................U.UGCCG..-..UaAGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAUC......GGCAA...........GG..........................GAUCg..........................................................................CU.......................U.UGCCG..Ca.UaAGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAUA......GGCAA...........AGc.........................UGU-..........................................................................gCU.......................U.UGCCG..Ca.UaAGC.AAACGGA.AGACACA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAUA......GGCAA...........AGc.........................GAU-..........................................................................gCU.......................U.UGCCG..Ca.UaAGC.AAACGGA.AGACACA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAUA......GGCAA...........AGc.........................GAU-..........................................................................gCU.......................U.UGCCG..Ca.CaAGC.AAACGGA.AGACACA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAUC......GGCAA...........AGu.........................AUC-..........................................................................gCU.......................U.UGCCA..Ca.UaAGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAUC......GGCAA...........GGu.........................AUC-..........................................................................gCU.......................U.UGCCG..Ca.UaAGC.AAACGGA.AGACAGA.AA GGCC.ACCU..CCG................................GGG....GGC.UUUACCAUA......GGCAA...........AGu.........................AUC-..........................................................................gCU.......................U.UGCCG..Ca.UaAGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UAG................................GGG....GGC.UUUACCAUA......GGCAA...........AGc.........................AUC-..........................................................................gCU.......................U.UGCCG..Cu.UaAGC.AAACGGA.AGACAGA.AA GGCC.ACCU..UCG................................GGG....GGC.UUUACCAUA......GGCAA...........AGc.........................AUC-..........................................................................gCU.......................U.UGCCG..Cu.UaAGC.AAACGGA.AGACAGA.AA