Rfam: Seed sequence alignment for RF03142

URS0001A24B2C_12908/1-69 unclassified sequences 0.0 URS0001A23F71_1354722/1-78 Roseovarius sp. MCTG156(2b) 0.0 URS0001A23636_12908/1-77 unclassified sequences 0.0 URS0001A23D9A_314265/1-84 Pelagibaca bermudensis HTCC2601 0.0 URS0001A2404C_12908/1-84 unclassified sequences 0.0 URS0001A24064_12908/1-93 unclassified sequences 0.0 URS0001A24219_501479/1-93 Citreicella sp. SE45 0.0 URS0001A23C11_12908/1-78 unclassified sequences 0.0 URS0001A246D5_12908/1-71 unclassified sequences 0.0 URS0001A23F1D_12908/1-113 unclassified sequences 0.0 URS0001A24199_12908/1-68 unclassified sequences 0.0 URS0001A24420_1577905/1-76 Tateyamaria sp. ANG-S1 0.0 URS0001A24115_12908/1-61 unclassified sequences 0.0 URS0001A2451F_12908/1-68 unclassified sequences 0.0 URS0001A247F4_314232/1-70 Loktanella vestfoldensis SKA53 0.0 URS0001A235AA_1122181/1-70 Yoonia vestfoldensis DSM 16212 0.0 URS0001A23EBA_12908/1-72 unclassified sequences 0.0 URS0001A23348_314256/1-81 Oceanicola granulosus HTCC2516 0.0 URS0001A249D0_12908/1-65 unclassified sequences 0.0 URS0001A242AA_579483/1-66 Loktanella sp. S4079 0.0 URS0001A2457C_12908/1-65 unclassified sequences 0.0 URS0001A23CA5_12908/1-65 unclassified sequences 0.0 URS0001A238FC_1461693/1-78 Actibacterium atlanticum 0.0 URS0001A240FC_12908/1-68 unclassified sequences 0.0 URS0001A23CAF_12908/1-76 unclassified sequences 0.0 URS0001A23A3C_12908/1-65 unclassified sequences 0.0 URS0001A234FF_12908/1-63 unclassified sequences 0.0 URS0001A2491C_12908/1-66 unclassified sequences 0.0 URS0001A24022_1122614/1-75 Pseudooceanicola nanhaiensis DSM 18065 0.0 URS0001A2458E_12908/1-69 unclassified sequences 0.0

GGCC.ACCC..UCG................................GGG....GGC.UUUACCAU-......CGGCA...........AAgc........................AUU-.........................................................................gcUU.......................U.GUCG-..Cu.UaAGC.AAACGGA.AGACAGA.AA GGUC.ACCC..AUCaug.............................GGG....GGC.UACAACUCA......GGCGG...........GGcc........................AUUUcggu.....................................................................ggUU.......................CaCGUCA.a-..U.AGC.AAACGGA.AGACAGA.AA GGCC.ACCU..GCGgacgcacagucga...................GGG....GGC.UAACACAUA......GGGUG...........GA..........................UCC-...........................................................................UC.......................C.ACCCG..U..C.UGC.AAACGGA.AGACAGA.-A GGCC.ACCU..GCGgauccauccgggaucga...............GGG....GGC.UUUCACAUA......GGGUG...........GAcc........................C---.........................................................................guUU.......................C.ACCCG..Uuc-.UGC.AAACGGA.AGACAGA.-A GGCC.ACCU..GCGgauccauccgggaucga...............GGG....GGC.UAACACAUA......GGGUG...........GAcc........................C---.........................................................................guUU.......................C.ACCCG..Uuc-.UGC.AAACGGA.AGACAGA.-A GGCC.ACCU..GCAggcagccuguccccgcgacagcagaccga...GGG....GGC.UGUAACAUA......GGGUG...........GAg.........................U---..........................................................................cUC.......................C.ACCCG..Uc.-.UGC.AAACGGA.AGACAGA.-A GGCC.ACCU..GCAggcagccuguccccgcgacagcagaccga...GGG....GGC.UGUAACAUA......GGGUG...........G-..........................AUUCu..........................................................................-C.......................C.ACCCG..U..C.UGC.AAACGGA.AGACAGA.-A GGGC.ACCU..UCG................................GGG....GCC.UAUAACUUCc.....GGUUC...........--..........................UGAUggcgaaagccgaau.............................................................--.......................G.AGCCG..C..AaAGC.AAAUGGA.AGACAGA.AA UGGG.ACCU..UCG................................GGG....CCC.UCUACCAUCacagacCGGGC...........G-..........................GCAA...........................................................................-C.......................G.CCUGG..C..GaAGC.AGACGGA.AGACAGG.AA GGGC.ACCUu.AGUagccgguuuugcacgaaaucugcggac....gGGG....GCC.UUAAACAUAgc....GCAGG...........--..........................AAAAccugcgcgcggcggggaga........................................................--.......................C.CCGC-..Cg.G.AGCuAAACGGA.AGACAGA.AA GGCC.ACCU..ACG................................GGG....GGC.UAUCACAUA......GGUGA...........ACuc........................AA--.........................................................................ggGU.......................U.CACCA..C..U.-GCuAAACGGA.AGACAGA.AA GGGC.ACCU..UCG................................GGG....GCC.UUUAACCAUa.....GGCGG...........--..........................GGGUgaucgcaccca................................................................--.......................U.CGUCG..Uu.U.AGCaAAACGGA.AGACAGU.AA GGGG.ACCU..UCG................................GGG....CCC.UGACAACA-......GCCGG...........C-..........................UAACc..........................................................................-G.......................C.CCGC-..-..AaAGC.-AACGGA.AGACAGA.-A UGGG.ACCU..UCG................................GGG....CCC.UAUAACCAUgac...GGUGCacacu......--..........................----...........................................................................--.......................G.CACC-..CgaUaAGCaAAACGGA.AGACAUC.-A GGGG.ACCU..UCG................................GGG....CCC.UGUAAACCAua....GUCCC...........GGac........................CU--.........................................................................guCC.......................G.GGACG..C..CaAGC.AAACGGA.AGA-AGC.UA GGGG.ACCU..UCG................................GGG....CCC.UGUAAACCAua....GUCCC...........GGac........................CU--.........................................................................guCC.......................G.GGACG..C..CaAGC.AAACGGA.AGA-AGC.AA GGGC.ACCU..UCG................................GGG....GCC.UUCAUACCAua....GCGUC...........GGg.........................AGGA..........................................................................cCC.......................G.ACGUG..Uu.U.AGCuAAACGGA.AGACAGC.AA GGGG.ACCU..UCG................................GGG....CCC.UUCAACU--......GCCGGg..........UCgaccagcgc.................CAC-..................................................................gcgccg..cGAgau....................C.CG-C-..-..AaAGC.-AACGGAaAGACAGU.AA GGGC.-C--..CAAg...............................--G....GCC.UCAAACAUA......GCGGG...........GCgc........................CCA-.........................................................................acGC.......................C.UCGCA..C..U.-GCuAAACGGA.AGACAGA.AA GGGG.ACCU..UCG................................GGG....CCC.UUUAACCACa.....GGUCC...........C-..........................AUCU...........................................................................-G.......................G.GACCG.aCa.G.AGC.AAACGGA.AGA-AGC.UA GGGG.UCC-..UUUg...............................-GG....CCC.UAUAAUA--......UGCAA...........GAcc........................CAAC.........................................................................ugUU.......................U.UGCA-..CauA.---.AAACGGA.AGACAGA.AA GGGG.AGC-..UUCg...............................-GC...gCCC.UACACACCC......GGGUC...........UG..........................AAACcu.........................................................................CA.......................G.ACCC-..C..-.-CC.UAACGGA.AGACAGA.GA GGCC.ACCU..UCG................................GGG....GGC.UAACAUAG-......GCGGG...........--..........................GAACcgcccugcggguca.............................................................--.......................C.CCCCG..CagU.UGCuAAACGGA.AGACAGA.AA GGGC.ACCU..ACG................................GGG....GCC.UUCAUCUAAca....GCCGG...........GCg.........................CGAAc.........................................................................cGC.......................C.CG-C-..-..AaAGC.-AACGGA.AGACAGA.AA GGGC.ACCU..ACG................................GGG....GCC.UACAACCACaua...GGCGG...........GGcc........................AAAGa........................................................................ggCC.......................UgCGUCG..Uu.-.UGCuAAACGGA.AGACAGA.CA GGGG.AUCU..UCG................................GAG....CCCgUUCACC---......CGCAG...........GCc.........................GCAA..........................................................................gGU.......................C.UGUG-..C..A.AGC.AAACGGA.AGACAGA.GA GGGG.AUCU..UCG................................GAG....CCC.UUCACCCGA......GACCCgcaa.......--..........................----...........................................................................--.......................G.GGUCG..C..GaAGC.AAACGGA.AGACAGA.GA GCGG.ACCU..ACG................................GGG....CCG.CAUAACCA-......UCAGU...........CUc.........................CACAa.........................................................................gAG.......................G.CUGAG..Cu.A.---.AAACGGA.AGACAGA.AA GGUC.ACCU..UCG................................GGG....GGC.CAUACAUAUa.....GGCGG...........G-..........................CCGGccuggccgca.................................................................-C.......................C.CGCCG..C..U.AGC.AAACGGA.AGACAGA.AA GGGG.AUCU..ACG................................GAG....CCC.UAUAACCAUu.....GGGUC...........CAg.........................ACCAu.........................................................................c-G.......................G.ACCCA..U..C.AGC.UGACGGA.AGACAGA.AA