Rfam: Seed sequence alignment for RF03142

URS0001A24AE0_12908/1-64 unclassified sequences 0.0 URS0001A23547_398580/1-43 Dinoroseobacter shibae DFL 12 0.0 URS0001A23ED0_318586/1-73 Paracoccus denitrificans PD1222 0.0 URS0001A24470_12908/1-63 unclassified sequences 0.0 URS0001A23C6F_1317121/1-64 Aestuariivita atlantica 0.0 URS0001A235AD_371731/1-41 Rhodobacter sp. SW2 0.0 URS0001A23B26_12908/1-65 unclassified sequences 0.0 URS0001A24577_1454373/1-62 Actibacterium mucosum KCTC 23349 0.0 URS0001A2476E_12908/1-70 unclassified sequences 0.0 URS0001A23F06_1379903/1-78 Roseivivax marinus 0.0 URS0001A236D2_12908/1-90 unclassified sequences 0.0 URS0001A24264_12908/1-64 unclassified sequences 0.0 URS0001A23318_12908/1-66 unclassified sequences 0.0 URS0001A24466_266809/1-66 Thalassobacter stenotrophicus 0.0 URS0001A24466_12908/1-66 unclassified sequences 0.0 URS0001A2323B_12908/1-91 unclassified sequences 0.0 URS0001A23D0F_1415159/1-62 Rhodobacter capsulatus YW2 0.0 URS0001A23D0F_272942/1-62 Rhodobacter capsulatus SB 1003 0.0 URS0001A23F91_349102/1-40 Rhodobacter sphaeroides ATCC 17025 0.0 URS0001A245A8_349101/1-40 Rhodobacter sphaeroides ATCC 17029 0.0 URS0001A245A8_992186/1-40 Rhodobacter sphaeroides WS8N 0.0 URS0001A24428_12908/1-98 unclassified sequences 0.0 URS0001A2453B_12908/1-62 unclassified sequences 0.0 URS0001A24034_12908/1-91 unclassified sequences 0.0 URS0001A2344E_12908/1-64 unclassified sequences 0.0 URS0001A23A17_1123247/1-64 Sediminimonas qiaohouensis DSM 21189 0.0 URS0001A23913_12908/1-91 unclassified sequences 0.0 URS0001A2456C_12908/1-62 unclassified sequences 0.0 URS0001A2362A_12908/1-64 unclassified sequences 0.0 URS0001A236D1_1579316/1-75 Halocynthiibacter arcticus 0.0

GCGG.-UGU..GCG................................GCA....CCG.CGAGACAUCaac...CGGGC...........--..........................CUGAg..........................................................................--.......................G.CCCG-..-..AaAGC.AGACGGA.AGACAGA.AA AGAA.GC--..CGG................................--G....UUC.U--------......-----...........--..........................ACCCggcacgcaac.................................................................--.......................-.-----..-..-.---.-AACGGA.AGACAGA.AA GGCC.-CCG..GCAg...............................CGG....GGC.CG-------......UCGCC...........--..........................UUUUgacugaaacggaccaccuca.......................................................--.......................G.GUCC-..-..AaAGC.-AACGGA.AGACAGA.AA UUCC.-UC-..AAAa...............................-GA....GGG.AUAUCACAUu.....GGGCG...........G-..........................GGGA...........................................................................-C.......................C.GUCCG..U..U.UGC.UAACGGA.AGACAGA.AA CGCGuGU--..UGCa...............................--G....CGC.GUCUAACAUa.....GGCAG...........G-..........................GCAA...........................................................................-C.......................C.UGCCG..U..U.UGCuAAACGGA.AGACAGA.AA GGAU.CCCA..ACGa...............................UGG....AUC.CUUCAAC--......-----uga........--..........................----...........................................................................--.......................-.-----..-..-.---.---CGGA.AGACAGA.AA GCAG.ACCU..ACG................................GGG....CUG.CUUCACAU-......UGCGG...........ACc.........................UACG..........................................................................gGG.......................C.CGCCA..Ca.U.---.ACACGGA.AGACAGU.AA GGCC.----..GAAa...............................---....GGC.CCACACAUAg.....CGGGGc..........GC..........................AAA-...........................................................................GC.......................C.CUCG-..Ca.C.AGCuAAACGGA.AGACAGA.AA GGAU.-CCA..CGAgcggga..........................UGGaaacAUC.CCAAACGAAac....GGACCuuu........--..........................----...........................................................................--.......................G.GUCC-..-..AaAGC.-AACGGA.AGACAGA.GA GACC.GGG-..UUCgc..............................-CC....GGU.CCGAACAUA......GGCGG...........GGc.........................GCCCauccggggca................................................................gCU.......................U.CGCCG.uC..U.-GC.AAACGGA.AGACAGA.AA GGUC.ACCC..GUGaaccacg.........................GGG....GGC.UUAACAUCAa.....GGGCGauga.......UUgc........................GGGUaaacucgca................................................................gcAA.......................C.GCUC-..-..A.AGCuAAACGGA.AGACAGA.AA GGGG.AGC-..UUCggc.............................-GCccuaUAC.C--------......CGCGG...........GUg.........................GCAA..........................................................................cAC.......................C.CGUG-..C..A.AGC.AAACGGA.AGACAGA.GA GGCC.ACCU..ACG................................GGG....GGC.UUUACAUA-......GCGGG...........AGc.........................AACU..........................................................................gCU.......................C.UCGC-..C..C.AGA.CAACGGA.AGACAGU.AA GGCC.ACCU..CCG................................GGG....GGC.UUUACAUA-......GCGGG...........AGc.........................GCAG..........................................................................gCU.......................C.UCGC-..C..C.AGA.CAACGGA.AGACAGU.AA GGCC.ACCU..CCG................................GGG....GGC.UUUACAUA-......GCGGG...........AGc.........................GCAG..........................................................................gCU.......................C.UCGC-..C..C.AGA.CAACGGA.AGACAGU.AA GGUC.ACCU..GCUcacaugca........................GGG....GGC.UUUACUUUCca....GGGGA...........UGauaucggg..................UAAA...................................................................cucggug.CAu......................C.ACCU-..-..G.AGCuAAACGGA.AGACAGA.AA GGGG.-AGC..UACg...............................GCG....CCC.CAUACGAAAc.....GGACCugaua......--..........................----...........................................................................--.......................G.GUCCA..-..A.AGC.-AACGGA.AGACAGA.GA GGGG.-AGC..UACg...............................GCG....CCC.CAUACGAAAc.....GGACCugaua......--..........................----...........................................................................--.......................G.GUCCA..-..A.AGC.-AACGGA.AGACAGA.GA GGCC.-CCC..GCAa...............................GGG....GGU.CUCUAGCUGa.....-----...........--..........................----...........................................................................--.......................-.-----..-..-.---.---CGGA.AGACAGG.AA GGCC.-CCU..CCCg...............................AGG....GGU.CUCUAGCUGa.....-----...........--..........................----...........................................................................--.......................-.-----..-..-.---.---CGGA.AGACAGG.AA GGCC.-CCU..CCCg...............................AGG....GGU.CUCUAGCUGa.....-----...........--..........................----...........................................................................--.......................-.-----..-..-.---.---CGGA.AGACAGG.AA GGUC.ACCU..GUUcagccaauggcgcuca................GGG....GGC.UUUACACCAa.....GGCGG...........UGaucucggg..................CGAA...................................................................cucgggg.CA.......................U.CGCU-..-..UaUGCuAAACGGA.AGACAGA.AA GGGG.AGC-..UUCg...............................-GC...gCCC.UUAACC---......UCGGG...........UC..........................GCAA...........................................................................GA.......................C.CUGGA..-..U.AGC.AAGCGGA.AGACAGU.AA GGUC.ACCU..GCAcaaaugca........................GGG....GGC.UUUACUUUCcagg..GGAUGau.........GCcggg......................UAAA.......................................................................cucgGUgcau...................C.ACCUG..-..-.AGCuAAACGGA.AGACAGA.AA GGGG.AUCU..UCG................................GAG....CCC.UUCACCG--......CCGGG...........UG..........................GCGA...........................................................................CA.......................C.CCGUG..C..-aAGC.AAACGGA.AGACAGG.AA GGGC.ACCC..AAG................................GGG....GCC.UGAAAA---......UCGGG...........CGgc........................ACG-.........................................................................gcCG.......................C.CUCA-..-..U.AGC.AAACGGA.AGACAGA.AA GGUC.ACCU..GCUcauaugca........................GGG....GGC.UUUACUUUCca....GGGGAugaugu.....CGgg........................AAAA.........................................................................cuCGg......................UgCAUCG..CcuG.AGCuAAACGGA.AGACAGA.AA GACC.-C--..AUUag..............................--G....GGU.UAGACCAUA......GCAAG...........G-..........................AUCAg..........................................................................-C.......................G.UUGCA..U..U.AGA.AAACGGA.AGACAGA.AA UGGA.ACCU..UCG................................GGG....UCC.UCUAACAUA......GUGAG...........GC..........................GAU-...........................................................................GC.......................C.UCGCA..Cu.-.-GA.AAACGAA.AGACAGU.AA GGCC.ACCU..UCG................................GGG....GGC.UCACAC---......CGCGG...........AUc.........................ACGCcaguagggcag...............................................................gGU.......................U.CGCU-..-..U.AGCuAAACGGA.AGACAGA.AA