Seed sequence alignment for RF03069

URS0000D693B1_12908/1-178 unclassified sequences 0.0 URS0000D692E6_12908/1-177 unclassified sequences 0.0 URS0000D69B9B_12908/1-181 unclassified sequences 0.0 URS0000D67941_12908/1-181 unclassified sequences 0.0 URS0000D6AAEC_12908/1-181 unclassified sequences 0.0 URS0000D659D1_12908/1-181 unclassified sequences 0.0 URS0000D667B3_12908/1-170 unclassified sequences 0.0 URS0000D6A6D0_12908/1-170 unclassified sequences 0.0 URS0000D65C5C_12908/1-177 unclassified sequences 0.0 URS0000D6C9E7_12908/1-177 unclassified sequences 0.0 URS0000D67379_12908/1-177 unclassified sequences 0.0 URS0000D6A5F3_12908/1-176 unclassified sequences 0.0 URS0000D674A9_12908/1-176 unclassified sequences 0.0 URS0000D689AF_12908/1-176 unclassified sequences 0.0 URS0000D66619_12908/1-176 unclassified sequences 0.0 URS0000D6989C_12908/1-175 unclassified sequences 0.0 URS0000D6A28A_12908/1-175 unclassified sequences 0.0 URS0000D68F5A_12908/1-175 unclassified sequences 0.0 URS0000D6D10E_12908/1-175 unclassified sequences 0.0 URS0000D69CAC_12908/1-175 unclassified sequences 0.0 URS0000D66E46_12908/1-175 unclassified sequences 0.0 URS0000D66042_12908/1-175 unclassified sequences 0.0 URS0000D69D91_12908/1-175 unclassified sequences 0.0 URS0000D68B48_12908/1-175 unclassified sequences 0.0 URS0000D6B13C_12908/1-176 unclassified sequences 0.0 URS0000D69BA0_12908/1-182 unclassified sequences 0.0 URS0000D68EE6_12908/1-181 unclassified sequences 0.0 URS0000D66D21_12908/1-180 unclassified sequences 0.0 URS0000D65D40_12908/1-178 unclassified sequences 0.0 URS0000D6AF3F_12908/1-178 unclassified sequences 0.0
UCCAACCGCUGC.CcG...GACACUCCACUUCU-.............................................UGCCCGGC.G..GCGG......CAACUUAAAGGAGGAAGAU---...................CCGCuGUGACUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AGGCGGCGCGC-.............CGGAAG.......................................................-GCG-GCUGCGAGGCGGCUUUU.UGCGGAG........GCA...GAGCGG.CUACAGUCAAU..auGAAUAUGGCA CCAACCGCUGUC.C.G...GACACUCCACUUCU-.............................................UGCCCG-G.C..GGCGg.....CAACUUAAAGGAGGAAGAU---...................CCGCuGUGACUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGCGGCGCGCC.............GGAA--.......................................................GGCG-GCUGCGAGGCGGCUUUU.UGCGGAG........GCA...GAGCGG.CUACAGUCAAU..acGAAUAUGGCA CCCCGCCGCCGG.A.C...GGCACUCCACUUCA-.............................................UGGCGUGC.G..GCGG......UCAAAAAAAGGAGGAAAAAAAC...................CCGCuGUGACUG.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.AGGCGGCGCGUC.............CAUUGC.......................................................GGCG-GCCGCGAGGCUACUCCU.UGCGGAG........GCA...GAGCAG.CCGCAGUCAAA...gAAAGAUGGCA UCCCGCCGCCGG.G.C...ACCACUCCACUUCA-.............................................UGGUGCCG.G..GCGG......UCAAAAAAAGGAGGAAUAAAAUc..................CCGCuGUGACUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AAGCGGCGCACC.............CAUAGC.......................................................GGUG-GCCGUGAGGCUGCUCCU.UGCGGAG........GCA...GAGCAG.CUGCAGUCAAG....CAAAAUGGCA UCCCGCCGCCGG.G.U...ACCACUCCACUUCA-.............................................UGGUGCCG.G..GCGG......UCAAAAAAAGGAGGAAUAAAAUc..................CCGCuGUGACUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AAGCGGCGCACC.............CAUAGC.......................................................GGUG-GCCGUGAGGCUGCUCCU.UGCGGAG........GCA...GAGCAG.CUGCAGUCAAG....UAAAAUGGCA UCCAACCUUUCG.U.C...GGCACUCCACUUUA-.............................................UGCCGCCG.G..AGGG......AAAACAAAAGGAGGAACAAGGU...................CCGCuAUGGCUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AAGCGGCGCGCCc............CGCAG-......................................................gGGCG-GUCGUGAGGGCGUUUU-.UGCGGAG........GCA...AAACGC.UCGCAGUCAGG...aAACAAUGGCA UCCCACCGGGGC.G.C...GGCACUCCACUUUA-.............................................UGCCCCGC.U..CCGGc.....AAAAGAAAAGGAGGAAUAC---...................CCGCcCUGACCG.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.ACGUGCG-----.............CGAAGC.......................................................-----CGCACGAGGCUGUUCCA.UGCGGAG........GCA...GAGCAG.CCACGGUCAUA...uCAUCAUGGCA CCCACCGGGCCG.A.C...GGCACUCCACUUUA-.............................................UGUCC-CG.G..CCCGgc....AAAUGAAAAGGAGGAAUAC---...................CCGCcCUGACCG.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.ACGUGCG-----.............CGAAGC.......................................................-----CGCACAAGGCUGUUCCA.UGCGGAG........GCA...GGACAG.CCACGGUCAAA...aCGAAAUGGCA UCCCACCGGCGU.G.C...GGCACUCCACUUUA-.............................................UGCCGCCC.U..CCGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGGUGCGGCAAUGU.GGAG............ACUUGUCGUA.AAGCACACAAGGgg...........CGCAG-.....................................................ccCC----GUGCGAGACUGCUCA-.UGCGGAG........GCA...GGGCAG.UUACAGUCAAG....ACGUAUGGCA UCCCACCGGCGU.G.C...GGCACUCCACUUUA-.............................................UGCCGCCC.U..CCGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGGUGCGGCAAUGU.GGAG............ACUUGUCGUA.AAGCACACAAGGgg...........CACAG-.....................................................ccCC----GUGCGAGAUUGCUCA-.UGCGGAG........GCA...GGGCAG.UUACAGUCAAG....ACGUAUGGCA UCCCAGCGGCGU.G.C...GGCACUCCACUUUA-.............................................UGGCGCCC.G..CCGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGGUGCGGCAAUGU.GGAG............ACUUGUCGUA.AAGCACACAAGGgg...........CACAG-.....................................................ccCC----GUGCGAGACUGCUCA-.UGCGGAG........GCA...GGGCAG.UUACAGUCAAG....ACGUAUGGCA UCCCACCGUCAG.G.C...GGCACUCCACUUCA-.............................................UGCCGCCG.G..ACGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGGUGCGGCAGUGG.GGAG............ACCUGUCGUA.AGGCACUGAGGG.............CAAUG-.......................................................CCC---GUGCGAGGCCGUCU-UuUGCGGAG........GCA...GGACGG.UUACAGUCAAA...aAUGUAUGGCA UCCCACCGUCAG.G.C...GGCACUCCACUUCA-.............................................UGCCACCG.G..ACGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AGGCACUGAGGG.............CAAUG-.......................................................CCC---GUGCGAGGCCGUCUUU.UGCGGAG........GCA...GGACGG.UUACAGUCAAA...aAUGUAUGGCA UCCCACCGUCAG.G.C...GGCACUCCACUUCA-.............................................UGCCGCCG.G..ACGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AGGCACCGAGGG.............CAAUG-.......................................................CCC---GUGCGAGGCCGUCUUU.UGCGGAG........GCA...GGACGG.UUACAGUCAAA...aAUGUAUGGCA UCCCACCGUCAG.G.C...GGCACUCCACUUCA-.............................................UGCCGCCG.G..ACGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AGGCACUGAGGG.............CAAUG-.......................................................CCC---GUGCGAGGCCGUCUUU.UGCGGAG........GCA...GGACGG.UUACAGUCAAA...aAUGUAUGGCA UCCCACCGUCAG.G.C...GGCACUCCACUUCA-.............................................UGCCGCCA.G..ACGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGAUGCGGCAGUGU.GGAG............ACCUGUCGUA.AGGCACCGAGGG.............CAAUG-.......................................................CCC---GUGCGAGGCCGUCU-UuUGCGGAG........GCA...GGACGG.UUACAGCCAAG....ACGUAUGGCA UCCCACCGUCAG.G.C...GACACUCCACUUCA-.............................................UGCCGCCG.G..ACGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AGGCACUGAGGG.............CAAUG-.......................................................CCC---GUGCGAGGCUGUCUUU.UGCGGAG........GCA...GGACGG.UUACAGCCAAG....ACGUAUGGCA UCCCACCGUCAG.G.C...GGCACUCCACUUCA-.............................................UGCCGCCG.G..ACGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGGUGCGGCAGUGU.GGAG............ACUUGUCGUA.AGGCACUGAGGG.............CAAUG-.......................................................CCC---GUGCGAGGCCGUCU-UuUGCGGAG........GCA...GGACGG.UUACAGCCAAG....ACGUAUGGCA UCCCACCGUCAG.G.C...GGCACUCCACUUCA-.............................................UGCCGCCA.G..ACGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AGGCACUGAGGG.............CAAUG-.......................................................CCC---GUGCGAGGCCGUCUUU.UGCGGAG........GCA...GGACGG.UUACAGCCAAG....ACGUAUGGCA UCCCACCGUCAG.G.C...GGCACUCCACUUCA-.............................................UGCCGCCG.G..ACGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AGGCACCGAGGG.............CAAUG-.......................................................CCC---GUGCGAGGCCGUCUUU.UGCGGAG........GCA...GGACGG.UUACAGCCAAG....ACGUAUGGCA UCCCACCGUCAG.G.C...GGCACUCCACUUCA-.............................................UGCCGCCG.G..ACGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AGGCACCGAGGG.............CAAUG-.......................................................CCC---GUGCGAGGCCGUCUUU.UGCGGAG........GCA...GGACGG.UUACAGCCAAG....ACAUAUGGCA UCCCACCGUCUG.G.C...GGCACUCCACUUCA-.............................................UGCCGCCG.G..ACGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AGGCACUGAGGG.............CAAUG-.......................................................CCC---GUGCGAGGCCGUCUUU.UGCGGAG........GCA...GGACGG.UUACAGCCAAG....ACGUAUGGCA UCCCACCGUCAG.G.C...GGCACUCCACUUCA-.............................................UGCCGCCG.G..ACGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AGGCACUGAGGG.............CAAUG-.......................................................CCC---GUGCGAGGCCGUCUUU.UGCGGAG........GCA...GGACGG.UUACAGCCAAG....ACGUAUGGCA UCCCACCGUCAG.G.C...GGCACUCCACUUCA-.............................................UGCCGCCG.G..ACGGc.....AAAAGAUAAGGAGGAAUAC---...................CCGCuGUGGCUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGCACUGAGGG.............CAAUG-.......................................................CCC---GUGCGAGGCCGUCUUU.UGCGGAG........GCA...GGACGG.UUACAGCCAAG....ACGUAUGGCA UCUCACCGCUGC.G.C...GGCACUCCACUUUA-.............................................UGCCGCCC.A..GCGGc.....AAAUGAUAAGGAGGAAUGA---...................CCGCuGUGGCUG.GCGGUGCGGCAAUGU.GGAG............ACUUGCCGUA.AGGCACCACGGG.............CUUCG-.......................................................CCC--GGUGCGAGACCGUUCCA.UGCGGAG........GCA...GAACGG.UUACAGCCAAG....ACGUAUGGCA CCCCACCGGUAC.G.G...UGCACUCCACUUUCU.............................................UGUACCGC.A..CCGGc.....AAAUGAAAAGGAGGAAUAAA--...................CCGCuGUGGCUG.GCGGUGCGGCAAUGU.GGAG............ACUUGCCGUA.AAGCGCGAGGG-.............ACAUUUuccg...................................................-CCC-CGCGUGAGGCUGUCGUU.UGCGGAG........GCA...GGACAG.CUACAGUCAAG....ACGUAUGGCA CCCCACCGGUAC.G.G...CGCACUCCACUUUU-.............................................UGCACCGC.A..CCGGc.....AAAUGAAAAGGAGGAAUGAG--...................CCGCuGUGGCUG.GCGGUGCGGCAAUGU.GGAG............ACUUGCCGUA.AGACGCGAGGG-.............ACAUUUuccg...................................................-CCC-CGCGUGAGG-CUGUCGUuUGCGGAG........GCAg..GGCAG-.CUACAGUCAAG....AUGUAUGGCA UCCCACCGGUGC.G.C...CGCACUCCACUUCU-.............................................UGCGCCGC.A..CCGGc.....AAAUGAAAAGGAGGAAUGGG--...................CCGCuGUGGCUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AGGCGCGAGGGA.............-CUUUCc......................................................GCCC-CGCGUGAGGCUGUCGUC.UGCGGAG........GCA...GGGCAG.CUACAGUCAGG...uAGUUAUGGCA UCCCACCGCCAC.G.G...CGCACUCCACUUCU-.............................................UGUGCCGC.G..GCGGc.....AAAAGAAAAGGAGAAUGAU---...................CCGCuGUGGCUG.GCGGUGCGGCAACGU.GGAG............ACUUGUCGUA.AGGCGCAUGGG-.............ACAUUCcg.....................................................-CCC-UGCGCGAGGCUGUCAU-.UGCGGAG........GCA...GGGCAG.UUACAGCCAAG...aAUGUAUGGCA CCCCACCGCCAC.G.G...CGCACUCCACUUCU-.............................................UGUGCCGC.G..GCGGc.....AAAAGAAAAGGAGAAUGAU---...................CCGCuGUGGCUG.GCGGUGCGGCAACGU.GGAG............ACUUGUCGUA.AGGCGCAUGGG-.............ACAUUCcg.....................................................-CCC-UGCGCGAGGCUGUCAU-.UGCGGAG........GCA...GGGCAG.UUACAGCCAAG...aAUGUAUGGCA

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