Seed sequence alignment for RF03069

URS0000D69E73_12908/1-176 unclassified sequences 0.0 URS0000D6998B_1263078/1-177 Eubacterium hallii CAG:12 0.0 URS0000D6BEDE_12908/1-177 unclassified sequences 0.0 URS0000D66B53_12908/1-177 unclassified sequences 0.0 URS0000D6588A_12908/1-171 unclassified sequences 0.0 URS0000D6B3C7_12908/1-175 unclassified sequences 0.0 URS0000D66AC2_12908/1-180 unclassified sequences 0.0 URS0000D67A72_12908/1-180 unclassified sequences 0.0 URS0000D6C9D0_12908/1-181 unclassified sequences 0.0 URS0000D6856D_12908/1-175 unclassified sequences 0.0 URS0000D69FCB_12908/1-174 unclassified sequences 0.0 URS0000D67509_12908/1-174 unclassified sequences 0.0 URS0000D6799E_12908/1-174 unclassified sequences 0.0 URS0000D6ABBD_12908/1-174 unclassified sequences 0.0 URS0000D6689A_12908/1-172 unclassified sequences 0.0 URS0000D6BA77_1226322/1-174 Oscillibacter sp. KLE 1728 0.0 URS0000D66DFC_12908/1-173 unclassified sequences 0.0 URS0000D6B4F8_12908/1-178 unclassified sequences 0.0 URS0000D6B71F_12908/1-178 unclassified sequences 0.0 URS0000D6AAF3_12908/1-182 unclassified sequences 0.0 URS0000D6A9AC_12908/1-174 unclassified sequences 0.0 URS0000D67D63_12908/1-166 unclassified sequences 0.0 URS0000D65BB8_12908/1-171 unclassified sequences 0.0 URS0000D695E1_12908/1-171 unclassified sequences 0.0 URS0000D66C62_12908/1-170 unclassified sequences 0.0 URS0000D67394_12908/1-215 unclassified sequences 0.0 URS0000D6953F_12908/1-213 unclassified sequences 0.0 URS0000D6D41B_12908/1-179 unclassified sequences 0.0 URS0000D67983_12908/1-178 unclassified sequences 0.0 URS0000D677AE_12908/1-178 unclassified sequences 0.0
CCCCCCUGAACC.G.U...CUCACUCCACUUUC-.............................................UGA-ACGG.U..CAGGg.....CAAAGAGAAGGAGGAUAA----...................CCGU.CAGACUU.GCGGGGCGGCAGUGU.GGGG............AACCGUCGUA.AUGUGGCGCGG-.............AAGUAAucg....................................................-CCG-GCUGCGAGGUGAUAUCG.UGCGGAG........GCA...GUAUCA.CUAAAGUCUAA....GAAUAUGGCA UCCCCCCUGAAC.C.G..uCUCACUCCACUUUC-.............................................UGAACGGU.C..AGGG......CAAAGAGAAGGAGGAUAA----...................CCGU.CAGAUUU.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGUGGCGCGG-.............AAGUAAucg....................................................-CCG-GCUGCGAGGUGAUAUCG.UGCGGAG........GCA...GUAUCA.CUAAAGUCUAA....GAAUAUGGCA UCCCCCCUGCAC.C.G..uUUCACUCCACUUUC-.............................................UGAACGGU.C..AGGG......CAAAGAAAAGGAGGAUAA----...................CCGU.CAGACUU.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGUGGCGCGG-.............AAGUAAucg....................................................-CCG-GCUGCGAGGUGAUAUCG.UGCGGAG........GCA...GUAUCA.CUAAAGUCUAA....GAAUAUGGCA UCCCCCCUGAAC.C.G..uCUCACUCCACUUUC-.............................................UGAACGGU.C..AGGG......CAAAGAAAAGGAGGAUAA----...................CCGU.CAGACUU.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGUGGCGCGG-.............AAGUAAucg....................................................-CCG-GCUGCGAGGUGAUAUCG.UGCGGAG........GCA...GUAUCA.CUAAAGUCUAA....GAAUAUGGCA UCUAUGGUGUCU.G.C...AGCUCUCCAUAACUU.............................................AGUUGCAG.G..CAA-......-CCUAAAAAGGAGGAGUUAUU-...................CCCC.-AUGCUC.GGGGUGCGGCAUUGU.GGAG............ACAUGCCGUAaAAGGUGCACGC-.............-UUU--.......................................................-GCG-GCACUGAGGGCAUACG-.GACGGAG........GUC...CGGUGU.CCGGAGCAGAG....AAUUAUGGCA CAAGGCAGGC-G.C.G...UCUACUCCACAAAA-.............................................UAGACGAU.G..ACCG......GCCAGAAAAGGAGGAUAAACACau.................CCAC.AGGGCUU.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGCGUCGCGC-.............GUCA--.......................................................-GCG-GACGCGAGGUACGGGCA.AGCGGAG........GCU...UCCGUG.CCAGAGCCGG-....UUGCAUGGCA AUCCAUGGCGCG.C.G...GGCACUCCAUUACCA.............................................UGUCCGCA.C..GUAC......AUAAAGAUAGGAGGAACAGAACgu.................CCGU.UAGGCUU.GCGGUGCGUCAGUGU.GGAG............ACCUGGCGUA.AUGCUGCGCGCC.............GGUUUU.......................................................GGCG-GCAGCGAGGCGCACUCU.UGCGGAG........GCA...GGUGCG.CUAAAGCCGG-....-AAAAUGUCA GUCCAUGGCGCG.C.G...GGCACUCCAUUACCA.............................................UGUCCGCA.C..GUAC......AUAAAGAUAGGAGGAAUAGAACgu.................CCGU.UAGGCUU.GCGGUGCGUCAGUGU.GGAG............ACCUGGCGUA.AUGCUGCGCGCC.............GGUUUU.......................................................GGCG-GCAGCGAGGCGCACUCU.UGCGGAG........GCA...GGUGCG.CUAAAGCCGGA....--AAAUGUCA AUCCAUGGCGUU.C.G...GGCACUCCAUUUUCA.............................................UGCCCGGG.C..GUAC......AUAAAGAUAGGAGGAACAGAACac.................CCGC.-AGGCUU.GCGGUGCGUCAGUGU.GGAG............ACCUGACGUA.AUGCCGCGCGUCc............CAUCGC......................................................gGACG-GCGGCGAGGCGCCCCAU.UGCGGAG........GCA...GAGGCG.CCAGAGCCGGA....--AAAUGUCA AUCUGUCCGC-U.C.C...GGCACUCCACAUUC-.............................................UGCCGAGA.G..CGGG......ACGAAAAAAGGAGGAGAACC--...................CCGC.CUGGCUC.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.AUGCAUCCGCGC.............UUCGC-.......................................................GCGCCGAUGUGAGGUCCGGGCA.AGCGGAG........GCU...CCCGGA.UCAGAGCCGGU....-AGCAUGGCA AUCUGUCCGC-U.C.C...GGCACUCCACAUUC-.............................................UGCCGAGA.G..CGGG......ACGAAAAAAGGAGGAGAACC--...................CCGC.CUGGCUC.GCGGUGCGGCAGUGU.GGAG............ACCUGCCACAgAGGCGGACCGGC.............CCCG--.......................................................GCCGG-CCGUGAGGGAACAGC-.UGCGGAG........GCG...CUGUUU.CCAGAGCCUGA....UAUCAUGGCA AUCCGUCCGC-U.C.C...GGCACUCCACAUUC-.............................................UGCCGGGA.G..CGGG......ACGAAAAAAGGAGGAGAACC--...................CCGC.CUGGCUC.GCGGUGCGGCAGCGU.GGAG............ACCUGCCACAgAGGCGGACCGGC.............CCCG--.......................................................GCCGG-CCGUGAGGGAACAGC-.UGCGGAG........GCG...CUGUUU.CCAGAGCCUGA....UAUCAUGGCA AUCCGUCCGC-U.C.C...GGCACUCCACAUUC-.............................................UGCCGGGA.G..CGGG......ACGAAAAAAGGAGGAGAACC--...................CCGC.CUGGCUC.GCGGUGCCGCAGUGU.GGAG............ACCUGCCACAgAGGCGGACCGGC.............CCCG--.......................................................GCCGG-CCGUGAGGGAACAGC-.UGCGGAG........GCG...CUGUUU.CCAGAGCCUGA....UAUCAUGGCA AUCCGUCCGC-U.C.C...GGCACUCCACAUUC-.............................................UGCCGGGA.G..CGGG......ACGAAAAAAGGAGGAGAACC--...................CCGC.CUGGCUC.GCGGUGCGGCAGUGU.GGAG............ACCUGCCACAgAGGCGGACCGGC.............CCCG--.......................................................GCCGG-CCGUGAGGGAACAGC-.UGCGGAG........GCG...CUGUUU.CCAGAGCCUGA....UAUCAUGGCA AUCCGUCCGCUC.-.C...GGCACUCCACAUUC-.............................................UGCCGAGA.G..CGGG......ACGAAAAAAGGAGGAGAACC--...................CCGC.CUGGCUC.GCGGUGCGGCAGUGU.GGAG............ACCUGCCACA.GAGCGGACCGGC.............-CCG--.......................................................GCCGG-CCGUGAGGGAACAGC-.UGCGGAG........GCG...CUGUUU.CCAGAGCCUGA....UAUCAUGGCA AUCCGUCCGCUC.-.C...GGCACUCCACAUUC-.............................................UGCCGAGA.G..CGGG......ACGAAAAAAGGAGGAGAACC--...................CCGC.CUGGCUC.GCGGUGCGGCAGUGU.GGAG............ACCUGCCACAgAGGCGGACCGGC.............-CCCG-.......................................................GCCGG-CCGUGAGGGAACAGC-.UGCGGAG........GCG...CUGUUU.CCAGAGCCUGA....UAUCAUGGCA AUCCGUCCGCU-.C.C...GGCACUCCACAUUC-.............................................UGCCGGGA.G..CGG-......GACGAAAAAGGAGGAGAACC--...................CCGC.CUGGCUC.GCGGUGCGGCAGUGU.GGAG............ACCUGCCACAgAGGCGGACCGGC.............-CCCG-.......................................................GCCGG-CCGUGAGGGAACAGC-.UGCGGAG........GCG...CUGUUU.CCAGAGCCUGA....UAUCAUGGCA UUAAGGUAGGCG.C.C...GCUACUCCACCCCGU.............................................UAGCGGCG.-..-GAC..c...GCCGGAUAAGGAGGAAUCACCCa..................CCGC.-AGGCUU.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.AUGCAUCCGCGC.............UUCGC-.......................................................GCGCCGAUGUGAGGUCCGGGCA.AGCGGAG........GCU...CCCGGA.UCAGAGCCGGU....-AGCAUGGCA UUAAGGUAGGCG.C.C...GCUCCUCCCCCCCGU.............................................UAGCGGCG.G..ACC-......GCCGGAUAAGGAGGAAUCACCCa..................CCGC.-AGGCUU.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.AUGCAUCCGCGC.............UUCGC-.......................................................GCGCCGAUGUGAGGUCCGGGCA.AGCGGAG........GCU...CCCGGA.UCAGAGCCGGU....-AGCAUGGCA UCCCAUCCGGCC.C.G...GGCACUCCACUUUC-.............................................UGCCCGCU.C..CGGA......UCAAAAAAAGGAGGAAAAAUAC...................CCGC.CCGGCUC.GCGGUGCGGCAGUGU.GGAG............ACCUGCCGUA.AAGCGGCGCGGCc............CAGAGC......................................................gGCCG-GCCGUGAGGGACCAGCA.UGCGGAU........GCA...CUGGUC.CCGGAGCCUCA...aUGCUAUGGCA UUCCCACCCGGC.C.C...GGCACUCCACUUUC-.............................................UGCCGGAU.C..GAG-......GUGAAAAAAGGAGGAAGAU---...................CCGC.CCGGCUC.GCGGCGCGGCAGUGU.GGAG............ACCUGCCGUGgAGGCGUAUCGGC.............UUUCC-.......................................................GCCGG-ACGUGAGGAGGCAGA-.CGCGGAG........GCG...CUACCC.CCAGAGCCCAC....UGCUAUGGCA UUCAGGCGGGAG.C.G...UCUACUCCACAUAAA.............................................UAGGCGUU.C..CCCCu.....AAAAGAAAAGGAGGAAAUG---...................GCCC.-CGGCUC.GGGCUGCGGCAGCGU.GGAG............ACCUGUCGUA.AUGCGG------.............CUAACA.......................................................------CCGCGAGAGCGCCUCU.UGCGGAG........GCA...GGGCGC.UUAGAGCAAAA....UCGAAUGGCA UUACGGCCGGGG.C.G..aUCUACUCCACAGACAa............................................UAGACGCC.C..CGCC......UGAAAAAAAGGAGGAAACAU--...................CCGG.-CAUCUC.CCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGCGGC-----.............CCGAAAa......................................................-----GCCGCGAGAGCGCCCCU.UGCGGAG........GCA...GAGCGC.CCAGAGACAAG....CAAAAUGGCA UUUCCAUGGCGC.C.G...GCCACUCCACUUUUC.............................................UGGUCGGC.A..GCAC......AUGAAAAAAGGAGGAUAAA---...................CCGC.-UUGCUC.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AAGCACGAGG--.............CCUUG-.......................................................--CC-CGUGUGAGGACGCAUCC.GGCGGAG........GCC...GUGCGU.CCGGAGCAAAA....CAAAAUGGCG UUCCAUGACGGC.A.G...ACCACUCCACUUUU-.............................................UGGACUGC.C..GGACa.....UGAAAGAAAGGAGGAAAG----...................GCCC.--UGCUC.GGGCUGCGGCAGUGU.GGAG............ACCUGCCGUA.AGGCACGAGGC-.............AAUA--.......................................................-GCC-UGUGCGAGGACGUUCCA.UGCGGAG........GCA...GAACGU.UCAGAGCGAAU....AAGCAUGGCG UAUUAUGCAUGU.G.G...GGCUCUCCUUACUGUcugccgcguacuuuuauuuuggcgcggcaaauaca..........AGUCUCGC.G..UGACau....AUAAAAAAAGGAGGAAUACAUUu..................CCCU.UUGGCUC.GGGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGCGGGUGGC-.............UUUU--.......................................................-GCC-CCUGCGAGGCCGCAUCA.GGAGGAU........UCC...GUGCGG.UUGGAGCCGUG...uAGGUAUGGCA UAUUAUGCAUGU.G.G...GGCUCUCCUUACUGUcugccguguacuuuuauuuuggcgcggcaaaugca..........AGCUCUUC.G..UGAC......AUAAAAAAAGGAGGAAUUCAUUu..................CCCU.UUGGCUC.GGGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGCGGGUGGC-.............UUUU--.......................................................-GCC-CCUGCGAGGCCGCAUCA.GGAGGAU........UCC...GUGCGG.UUGGAGCCGUG...uAGGUAUGGCA UUCCGGGCGCUG.C.G...UCUACUCCACAAACA.............................................UAGGCGCA.G..CUU-......CCGAAAAAAGGAGGAAAAAAAA...................GCCC.--GGCUC.GGGCUGCGGCAGUGU.GGAG............ACCUGCCGUA.AUGCGGGACAUCc............CAAAGC......................................................gGAUG-GCCGCGAGGGCGUACCA.AGCGAAG........GCU...GUACGU.CCGGAGCAUGA....AAAAAUGGCG UUCCGGGCGCUG.C.G...UCUACUCCACAAACA.............................................UAGGCGCA.G..CUU-......CCGAAAAAAGGAGGAAAAAAA-...................GCCCg---GCUC.GGGCUGCGGCAGUGU.GGAG............ACCUGCCGUA.AUGCGGGACAUCc............CAAAGC......................................................gGAUG-GCCGCGAGGGCGUACCA.AGCGAAG........GCU...GUACGU.CCGGAGCAUGA....AAAAAUGGCG UCCAACCGCUGC.CcG...GACACUCCACUUCU-.............................................UGCCCGGC.G..GCGG......CAGCUUAAAGGAGGAAGAU---...................CCGCuGUGACUG.GCGGUGCGGCAGUGU.GGAG............ACCUGUCGUA.AUGCGGCGCGC-.............CGGAAG.......................................................-GCG-GCUGCGAGGCGGCUUUU.UGCGGAG........GCA...GAGCGG.CUACAGUCAAU..auGAAUAUGGCA

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